ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags8m17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103683.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 5e-35
2dbj|AK059732.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 5e-35
3dbj|AK070881.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
4gb|AY108475.1| Zea mays PCO085021 mRNA sequence 80 9e-12
5dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
6dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
7gb|AC018843.4|AC018843 Homo sapiens chromosome 3 clone RP11-900O... 44 0.49
8gb|AC064874.4| Homo sapiens BAC clone RP11-680O16 from 2, comple... 44 0.49
9gb|AC018505.4|AC018505 Homo sapiens chromosome 3 clone RP11-58I1... 44 0.49
10gb|AC018831.4|AC018831 Homo sapiens chromosome 3 clone RP11-481B... 44 0.49
11gb|AC011599.8|AC011599 Homo sapiens 3 BAC RP11-606C6 (Roswell Pa... 44 0.49
12gb|AC002449.1|AC002449 Human PAC clone RP3-404K21 from Xq23, com... 44 0.49
13gb|AC069271.5| Homo sapiens chromosome 3 clone RP11-715I4 map 3p... 44 0.49
14gb|AC018836.5| Homo sapiens chromosome 3 clone RP11-588P9 map 3p... 44 0.49
15gb|BC054581.1| Danio rerio protein kinase, cGMP-dependent, type ... 42 1.9
16emb|BX294129.10| Zebrafish DNA sequence from clone DKEYP-34H12 i... 42 1.9
17emb|BX276091.6| Zebrafish DNA sequence from clone CH211-267P9 in... 42 1.9
18ref|NM_201030.1| Danio rerio protein kinase, cGMP-dependent, typ... 42 1.9
19gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESR... 40 7.6
20gb|AC121155.2| Homo sapiens BAC clone RP11-469P13 from 4, comple... 40 7.6
21gb|AC005681.2| Homo sapiens BAC clone GS1-59G8 from 7, complete ... 40 7.6
22emb|BX927396.13| Zebrafish DNA sequence from clone DKEY-216H18 i... 40 7.6
23gb|AC125257.4| Homo sapiens chromosome , clone RP11-229E13, comp... 40 7.6
24gb|AC093853.3| Homo sapiens BAC clone RP11-502M1 from 4, complet... 40 7.6
25gb|AC096635.2| Homo sapiens chromosome 1 clone RP11-75H16, compl... 40 7.6
26emb|BX649534.9| Zebrafish DNA sequence from clone DKEY-31F5 in l... 40 7.6
27gb|AC148600.2| Xenopus tropicalis clone CH216-62H10, complete se... 40 7.6
28gb|AC132287.3| Mus musculus BAC clone RP24-302M13 from 8, comple... 40 7.6
29emb|AL663052.8| Mouse DNA sequence from clone RP23-202N14 on chr... 40 7.6
30gb|AC026709.7| Homo sapiens chromosome 5 clone CTD-2084I18, comp... 40 7.6 
>dbj|AK103683.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136F06, full
            insert sequence
          Length = 1269

 Score =  157 bits (79), Expect = 5e-35
 Identities = 176/206 (85%), Gaps = 3/206 (1%)
 Strand = Plus / Minus

                                                                        
Query: 331  tatcagcagaaccgcaaagcgtactcaagttccttctcgtcggcacagctgtaacccaac 390
            |||||||| |||| ||| || || |||||||||||||| || ||||||||||||||||||
Sbjct: 1183 tatcagcaaaacctcaaggcatattcaagttccttctcatcagcacagctgtaacccaac 1124

                                                                        
Query: 391  tgataagcacgtgcaaatcgtccagatcccatgaatggctctgcttcatcagtcacaccg 450
            ||||| || ||||||||||||||||| ||||| ||||||||||||||||| |||| ||| 
Sbjct: 1123 tgatatgcgcgtgcaaatcgtccagaacccataaatggctctgcttcatcggtcatacca 1064

                                                                        
Query: 451  ccttgctgctgatcagtatca-ca--agtgtcccactcgtcatcaggacataaaaacctc 507
             |||| ||  ||||||||||| ||  ||  |||||||| ||||||||||| ||  |||| 
Sbjct: 1063 gcttgttgtagatcagtatcatcatcagcatcccactcatcatcaggacacaaccacctt 1004

                                      
Query: 508  tcaaaacagtgcccagatatcgtaca 533
            ||||| |||||||||||||| |||||
Sbjct: 1003 tcaaagcagtgcccagatattgtaca 978



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 239  atttcccttgccaaccaaaaacttg 263
            ||||||||||| |||||||||||||
Sbjct: 1243 atttcccttgcaaaccaaaaacttg 1219
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>dbj|AK059732.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-G12, full
            insert sequence
          Length = 1393

 Score =  157 bits (79), Expect = 5e-35
 Identities = 176/206 (85%), Gaps = 3/206 (1%)
 Strand = Plus / Minus

                                                                        
Query: 331  tatcagcagaaccgcaaagcgtactcaagttccttctcgtcggcacagctgtaacccaac 390
            |||||||| |||| ||| || || |||||||||||||| || ||||||||||||||||||
Sbjct: 1202 tatcagcaaaacctcaaggcatattcaagttccttctcatcagcacagctgtaacccaac 1143

                                                                        
Query: 391  tgataagcacgtgcaaatcgtccagatcccatgaatggctctgcttcatcagtcacaccg 450
            ||||| || ||||||||||||||||| ||||| ||||||||||||||||| |||| ||| 
Sbjct: 1142 tgatatgcgcgtgcaaatcgtccagaacccataaatggctctgcttcatcggtcatacca 1083

                                                                        
Query: 451  ccttgctgctgatcagtatca-ca--agtgtcccactcgtcatcaggacataaaaacctc 507
             |||| ||  ||||||||||| ||  ||  |||||||| ||||||||||| ||  |||| 
Sbjct: 1082 gcttgttgtagatcagtatcatcatcagcatcccactcatcatcaggacacaaccacctt 1023

                                      
Query: 508  tcaaaacagtgcccagatatcgtaca 533
            ||||| |||||||||||||| |||||
Sbjct: 1022 tcaaagcagtgcccagatattgtaca 997



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 239  atttcccttgccaaccaaaaacttg 263
            ||||||||||| |||||||||||||
Sbjct: 1262 atttcccttgcaaaccaaaaacttg 1238
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>dbj|AK070881.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065H01, full
            insert sequence
          Length = 1433

 Score =  149 bits (75), Expect = 1e-32
 Identities = 157/182 (86%), Gaps = 3/182 (1%)
 Strand = Plus / Minus

                                                                        
Query: 355  tcaagttccttctcgtcggcacagctgtaacccaactgataagcacgtgcaaatcgtcca 414
            |||||||||||||| || ||||||||||||||||||||||| || |||||||||||||||
Sbjct: 1052 tcaagttccttctcatcagcacagctgtaacccaactgatatgcgcgtgcaaatcgtcca 993

                                                                        
Query: 415  gatcccatgaatggctctgcttcatcagtcacaccgccttgctgctgatcagtatca-ca 473
            || ||||| ||||||||||||||||| |||| |||  |||| ||  ||||||||||| ||
Sbjct: 992  gaacccataaatggctctgcttcatcggtcataccagcttgttgtagatcagtatcatca 933

                                                                        
Query: 474  --agtgtcccactcgtcatcaggacataaaaacctctcaaaacagtgcccagatatcgta 531
              ||  |||||||| ||||||||||| ||  |||| ||||| |||||||||||||| |||
Sbjct: 932  tcagcatcccactcatcatcaggacacaaccacctttcaaagcagtgcccagatattgta 873

              
Query: 532  ca 533
            ||
Sbjct: 872  ca 871



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 239  atttcccttgccaaccaaaaacttg 263
            ||||||||||| |||||||||||||
Sbjct: 1136 atttcccttgcaaaccaaaaacttg 1112
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>gb|AY108475.1| Zea mays PCO085021 mRNA sequence
          Length = 749

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 124/152 (81%)
 Strand = Plus / Minus

                                                                       
Query: 409 cgtccagatcccatgaatggctctgcttcatcagtcacaccgccttgctgctgatcagta 468
           ||||||||||||||||||||||||||||||||    |||||  | || ||| | || |||
Sbjct: 396 cgtccagatcccatgaatggctctgcttcatccactacaccagcctgttgcagctcggta 337

                                                                       
Query: 469 tcacaagtgtcccactcgtcatcaggacataaaaacctctcaaaacagtgcccagatatc 528
           |||  ||  ||||| || ||||||||||| |   |||||||||| ||||| |||||||||
Sbjct: 336 tcatcagcatcccattcatcatcaggacacagccacctctcaaagcagtggccagatatc 277

                                           
Query: 529 gtacagacaagtaacccactagtttggtccaa 560
           ||||| | ||| | |||||||| |||||||||
Sbjct: 276 gtacaaagaagcagcccactagattggtccaa 245
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Minus

                                                                            
Query: 331      tatcagcagaaccgcaaagcgtactcaagttccttctcgtcggcacagctgtaacccaac 390
                |||||||| |||| ||| || || |||||||||||||| || ||||||||||||||||||
Sbjct: 29482965 tatcagcaaaacctcaaggcatattcaagttccttctcatcagcacagctgtaacccaac 29482906

                              
Query: 391      tgataagcacgtgc 404
                ||||| || |||||
Sbjct: 29482905 tgatatgcgcgtgc 29482892



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                          
Query: 404      caaatcgtccagatcccatgaatggctctgcttcatcagtca 445
                ||||||||||||| ||||| ||||||||||||||||| ||||
Sbjct: 29482370 caaatcgtccagaacccataaatggctctgcttcatcggtca 29482329



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                        
Query: 478      tcccactcgtcatcaggacataaaaacctctcaaaacagtgcccagatatcgtaca 533
                |||||||| ||||||||||| ||  |||| ||||| |||||||||||||| |||||
Sbjct: 29482103 tcccactcatcatcaggacacaaccacctttcaaagcagtgcccagatattgtaca 29482048



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 239      atttcccttgccaaccaaaaacttg 263
                ||||||||||| |||||||||||||
Sbjct: 29483025 atttcccttgcaaaccaaaaacttg 29483001
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>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0655A07
          Length = 172473

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Minus

                                                                         
Query: 331   tatcagcagaaccgcaaagcgtactcaagttccttctcgtcggcacagctgtaacccaac 390
             |||||||| |||| ||| || || |||||||||||||| || ||||||||||||||||||
Sbjct: 47471 tatcagcaaaacctcaaggcatattcaagttccttctcatcagcacagctgtaacccaac 47412

                           
Query: 391   tgataagcacgtgc 404
             ||||| || |||||
Sbjct: 47411 tgatatgcgcgtgc 47398



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                       
Query: 404   caaatcgtccagatcccatgaatggctctgcttcatcagtca 445
             ||||||||||||| ||||| ||||||||||||||||| ||||
Sbjct: 46876 caaatcgtccagaacccataaatggctctgcttcatcggtca 46835



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 478   tcccactcgtcatcaggacataaaaacctctcaaaacagtgcccagatatcgtaca 533
             |||||||| ||||||||||| ||  |||| ||||| |||||||||||||| |||||
Sbjct: 46609 tcccactcatcatcaggacacaaccacctttcaaagcagtgcccagatattgtaca 46554



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 239   atttcccttgccaaccaaaaacttg 263
             ||||||||||| |||||||||||||
Sbjct: 47531 atttcccttgcaaaccaaaaacttg 47507
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>gb|AC018843.4|AC018843 Homo sapiens chromosome 3 clone RP11-900O22 map 3p, complete sequence
          Length = 211012

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 292   ggtctgaaggaggtctgaagga 313
             ||||||||||||||||||||||
Sbjct: 80730 ggtctgaaggaggtctgaagga 80751
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>gb|AC064874.4| Homo sapiens BAC clone RP11-680O16 from 2, complete sequence
          Length = 160655

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 60   gtcaagcatttattttattact 81
            ||||||||||||||||||||||
Sbjct: 6249 gtcaagcatttattttattact 6270
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>gb|AC018505.4|AC018505 Homo sapiens chromosome 3 clone RP11-58I13 map 3p, complete sequence
          Length = 196044

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 292    ggtctgaaggaggtctgaagga 313
              ||||||||||||||||||||||
Sbjct: 133735 ggtctgaaggaggtctgaagga 133756
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>gb|AC018831.4|AC018831 Homo sapiens chromosome 3 clone RP11-481B18 map 3p, complete sequence
          Length = 178548

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 292    ggtctgaaggaggtctgaagga 313
              ||||||||||||||||||||||
Sbjct: 162116 ggtctgaaggaggtctgaagga 162137
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>gb|AC011599.8|AC011599 Homo sapiens 3 BAC RP11-606C6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 209876

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 292   ggtctgaaggaggtctgaagga 313
             ||||||||||||||||||||||
Sbjct: 76150 ggtctgaaggaggtctgaagga 76129
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>gb|AC002449.1|AC002449 Human PAC clone RP3-404K21 from Xq23, complete sequence
          Length = 173767

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 533   agacaagtaacccactagtttg 554
             ||||||||||||||||||||||
Sbjct: 89829 agacaagtaacccactagtttg 89850
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>gb|AC069271.5| Homo sapiens chromosome 3 clone RP11-715I4 map 3p, complete sequence
          Length = 229408

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 292    ggtctgaaggaggtctgaagga 313
              ||||||||||||||||||||||
Sbjct: 214432 ggtctgaaggaggtctgaagga 214453
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>gb|AC018836.5| Homo sapiens chromosome 3 clone RP11-588P9 map 3p, complete sequence
          Length = 184716

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 292   ggtctgaaggaggtctgaagga 313
             ||||||||||||||||||||||
Sbjct: 16347 ggtctgaaggaggtctgaagga 16368
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>gb|BC054581.1| Danio rerio protein kinase, cGMP-dependent, type I, mRNA (cDNA
           clone MGC:63955 IMAGE:6791791), complete cds
          Length = 3107

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 328 gaatatcagcagaaccgcaaa 348
           |||||||||||||||||||||
Sbjct: 543 gaatatcagcagaaccgcaaa 563
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>emb|BX294129.10| Zebrafish DNA sequence from clone DKEYP-34H12 in linkage group 13,
              complete sequence
          Length = 156627

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 328    gaatatcagcagaaccgcaaa 348
              |||||||||||||||||||||
Sbjct: 154549 gaatatcagcagaaccgcaaa 154569
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>emb|BX276091.6| Zebrafish DNA sequence from clone CH211-267P9 in linkage group 5,
             complete sequence
          Length = 134612

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 328   gaatatcagcagaaccgcaaa 348
             |||||||||||||||||||||
Sbjct: 82094 gaatatcagcagaaccgcaaa 82074
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>ref|NM_201030.1| Danio rerio protein kinase, cGMP-dependent, type I (prkg1), mRNA
          Length = 3107

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 328 gaatatcagcagaaccgcaaa 348
           |||||||||||||||||||||
Sbjct: 543 gaatatcagcagaaccgcaaa 563
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>gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESRRG) gene, complete cds
          Length = 590284

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 504    cctctcaaaacagtgcccag 523
              ||||||||||||||||||||
Sbjct: 280568 cctctcaaaacagtgcccag 280587
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>gb|AC121155.2| Homo sapiens BAC clone RP11-469P13 from 4, complete sequence
          Length = 92400

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 491   caggacataaaaacctctca 510
             ||||||||||||||||||||
Sbjct: 27918 caggacataaaaacctctca 27937
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>gb|AC005681.2| Homo sapiens BAC clone GS1-59G8 from 7, complete sequence
          Length = 129989

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    aagcatttattttattacta 82
             ||||||||||||||||||||
Sbjct: 75547 aagcatttattttattacta 75566
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>emb|BX927396.13| Zebrafish DNA sequence from clone DKEY-216H18 in linkage group 9,
              complete sequence
          Length = 115853

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    tttaggaaactatacaacaa 119
              ||||||||||||||||||||
Sbjct: 106193 tttaggaaactatacaacaa 106212
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>gb|AC125257.4| Homo sapiens chromosome , clone RP11-229E13, complete sequence
          Length = 159726

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     atgggcactgttgtgaggat 51
              ||||||||||||||||||||
Sbjct: 114317 atgggcactgttgtgaggat 114298
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>gb|AC093853.3| Homo sapiens BAC clone RP11-502M1 from 4, complete sequence
          Length = 212207

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 491   caggacataaaaacctctca 510
             ||||||||||||||||||||
Sbjct: 24517 caggacataaaaacctctca 24536
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>gb|AC096635.2| Homo sapiens chromosome 1 clone RP11-75H16, complete sequence
          Length = 173256

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 504    cctctcaaaacagtgcccag 523
              ||||||||||||||||||||
Sbjct: 164038 cctctcaaaacagtgcccag 164019
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>emb|BX649534.9| Zebrafish DNA sequence from clone DKEY-31F5 in linkage group 4,
             complete sequence
          Length = 205347

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 496   cataaaaacctctcaaaaca 515
             ||||||||||||||||||||
Sbjct: 45243 cataaaaacctctcaaaaca 45224
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>gb|AC148600.2| Xenopus tropicalis clone CH216-62H10, complete sequence
          Length = 162075

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 288   tgaaggtctgaaggaggtct 307
             ||||||||||||||||||||
Sbjct: 61549 tgaaggtctgaaggaggtct 61530
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>gb|AC132287.3| Mus musculus BAC clone RP24-302M13 from 8, complete sequence
          Length = 195405

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    tctcataatttaggaaacta 111
             ||||||||||||||||||||
Sbjct: 51219 tctcataatttaggaaacta 51200
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>emb|AL663052.8| Mouse DNA sequence from clone RP23-202N14 on chromosome X, complete
              sequence
          Length = 202972

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 503    acctctcaaaacagtgccca 522
              ||||||||||||||||||||
Sbjct: 152339 acctctcaaaacagtgccca 152320
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>gb|AC026709.7| Homo sapiens chromosome 5 clone CTD-2084I18, complete sequence
          Length = 139402

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   ctgattttgcattcataggc 184
             ||||||||||||||||||||
Sbjct: 32380 ctgattttgcattcataggc 32361


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,261,375
Number of Sequences: 3902068
Number of extensions: 5261375
Number of successful extensions: 92533
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92427
Number of HSP's gapped (non-prelim): 106
length of query: 560
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 537
effective length of database: 17,143,297,704
effective search space: 9205950867048
effective search space used: 9205950867048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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