| Clone Name | rbags9b03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009251.1| Triticum aestivum clone wlk4.pk0006.e8:fis, full insert mRNA sequence Length = 1553 Score = 418 bits (211), Expect = e-113 Identities = 235/243 (96%) Strand = Plus / Minus Query: 434 aatcttcacagccttctcatagatttcattgttatcatggctctgcaggttctcaatctt 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1553 aatcttcacagccttctcatagatttcattgttatcatggctctgcaggttctcaatctt 1494 Query: 494 ttccaggccttctgcttcatcaatcatctgtgcatagacatttccctccccagaagcacc 553 ||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 1493 ttccaggccctctgcttcatcaatcatctgcgcatagacattcccctccccagaagcacc 1434 Query: 554 caaattcttatcagtctctccaactttgagaatgttctcaagaccctccaagcaaactgt 613 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1433 caaattcttatcagtttctccaactttgagaatgttctcaagaccctccaagcaaacagt 1374 Query: 614 aacgattcttggatctgggcaaaggaggaggtcacacagtggcttgatgcagccctcgct 673 ||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1373 aacaatccttggatctgggcaaagcaggaggtcacacagtggcttgatgcagccctcgct 1314 Query: 674 aac 676 ||| Sbjct: 1313 aac 1311
>ref|NM_187874.1| Oryza sativa (japonica cultivar-group), Ozsa8318 predicted mRNA Length = 1581 Score = 236 bits (119), Expect = 8e-59 Identities = 235/273 (86%), Gaps = 3/273 (1%) Strand = Plus / Minus Query: 401 atcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttc 460 |||||| ||||| ||||||||||| |||||||||||||||||||| || |||||||| || Sbjct: 1497 atcatcctcctcatccatccagtaggcctcaagaatcttcacagctttttcatagatctc 1438 Query: 461 attgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatcat 520 |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 1437 attgttatcatggctctgcaagttctcaatcttttccaaaccttccgcttcatcaatcat 1378 Query: 521 ctgtgcatagacatttccctccccagaagcacccaaattcttatcagtctctccaacttt 580 ||| | | ||||||| | || || ||| |||| |||| || || ||||| ||||| Sbjct: 1377 ctgggaaaagacattcacatcacc---tgcagccaaggtcttgtcggtttctcctacttt 1321 Query: 581 gagaatgttctcaagaccctccaagcaaactgtaacgattcttggatctgggcaaaggag 640 ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| || Sbjct: 1320 aagaatgttctcgagaccctccaaacaaactgtaacgattcttatatctgggcaaataag 1261 Query: 641 gaggtcacacagtggcttgatgcagccctcgct 673 || ||||||| ||||||||||||||||||||| Sbjct: 1260 aagatcacacaatggcttgatgcagccctcgct 1228
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 236 bits (119), Expect = 8e-59 Identities = 235/273 (86%), Gaps = 3/273 (1%) Strand = Plus / Minus Query: 401 atcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttc 460 |||||| ||||| ||||||||||| |||||||||||||||||||| || |||||||| || Sbjct: 8385627 atcatcctcctcatccatccagtaggcctcaagaatcttcacagctttttcatagatctc 8385568 Query: 461 attgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatcat 520 |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 8385567 attgttatcatggctctgcaagttctcaatcttttccaaaccttccgcttcatcaatcat 8385508 Query: 521 ctgtgcatagacatttccctccccagaagcacccaaattcttatcagtctctccaacttt 580 ||| | | ||||||| | || || ||| |||| |||| || || ||||| ||||| Sbjct: 8385507 ctgggaaaagacattcacatcacc---tgcagccaaggtcttgtcggtttctcctacttt 8385451 Query: 581 gagaatgttctcaagaccctccaagcaaactgtaacgattcttggatctgggcaaaggag 640 ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| || Sbjct: 8385450 aagaatgttctcgagaccctccaaacaaactgtaacgattcttatatctgggcaaataag 8385391 Query: 641 gaggtcacacagtggcttgatgcagccctcgct 673 || ||||||| ||||||||||||||||||||| Sbjct: 8385390 aagatcacacaatggcttgatgcagccctcgct 8385358 Score = 69.9 bits (35), Expect = 1e-08 Identities = 71/79 (89%), Gaps = 3/79 (3%) Strand = Plus / Minus Query: 31 ttgcagaagct-caactcaggctataca-gtagcaaaatagtgcacaccatact-aaaga 87 ||||||||||| | |||||||||||||| |||||||||| ||||||||||||| ||||| Sbjct: 8386101 ttgcagaagcttcgactcaggctatacaagtagcaaaatgttgcacaccatactaaaaga 8386042 Query: 88 tgcaacccctacatagtag 106 ||||| | ||||||||||| Sbjct: 8386041 tgcaaacactacatagtag 8386023
>dbj|AP000816.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0503G09 Length = 59843 Score = 236 bits (119), Expect = 8e-59 Identities = 235/273 (86%), Gaps = 3/273 (1%) Strand = Plus / Minus Query: 401 atcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttc 460 |||||| ||||| ||||||||||| |||||||||||||||||||| || |||||||| || Sbjct: 50253 atcatcctcctcatccatccagtaggcctcaagaatcttcacagctttttcatagatctc 50194 Query: 461 attgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatcat 520 |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 50193 attgttatcatggctctgcaagttctcaatcttttccaaaccttccgcttcatcaatcat 50134 Query: 521 ctgtgcatagacatttccctccccagaagcacccaaattcttatcagtctctccaacttt 580 ||| | | ||||||| | || || ||| |||| |||| || || ||||| ||||| Sbjct: 50133 ctgggaaaagacattcacatcacc---tgcagccaaggtcttgtcggtttctcctacttt 50077 Query: 581 gagaatgttctcaagaccctccaagcaaactgtaacgattcttggatctgggcaaaggag 640 ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| || Sbjct: 50076 aagaatgttctcgagaccctccaaacaaactgtaacgattcttatatctgggcaaataag 50017 Query: 641 gaggtcacacagtggcttgatgcagccctcgct 673 || ||||||| ||||||||||||||||||||| Sbjct: 50016 aagatcacacaatggcttgatgcagccctcgct 49984 Score = 69.9 bits (35), Expect = 1e-08 Identities = 71/79 (89%), Gaps = 3/79 (3%) Strand = Plus / Minus Query: 31 ttgcagaagct-caactcaggctataca-gtagcaaaatagtgcacaccatact-aaaga 87 ||||||||||| | |||||||||||||| |||||||||| ||||||||||||| ||||| Sbjct: 50727 ttgcagaagcttcgactcaggctatacaagtagcaaaatgttgcacaccatactaaaaga 50668 Query: 88 tgcaacccctacatagtag 106 ||||| | ||||||||||| Sbjct: 50667 tgcaaacactacatagtag 50649
>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0705D01 Length = 147174 Score = 236 bits (119), Expect = 8e-59 Identities = 235/273 (86%), Gaps = 3/273 (1%) Strand = Plus / Minus Query: 401 atcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttc 460 |||||| ||||| ||||||||||| |||||||||||||||||||| || |||||||| || Sbjct: 582 atcatcctcctcatccatccagtaggcctcaagaatcttcacagctttttcatagatctc 523 Query: 461 attgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatcat 520 |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 522 attgttatcatggctctgcaagttctcaatcttttccaaaccttccgcttcatcaatcat 463 Query: 521 ctgtgcatagacatttccctccccagaagcacccaaattcttatcagtctctccaacttt 580 ||| | | ||||||| | || || ||| |||| |||| || || ||||| ||||| Sbjct: 462 ctgggaaaagacattcacatcacc---tgcagccaaggtcttgtcggtttctcctacttt 406 Query: 581 gagaatgttctcaagaccctccaagcaaactgtaacgattcttggatctgggcaaaggag 640 ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| || Sbjct: 405 aagaatgttctcgagaccctccaaacaaactgtaacgattcttatatctgggcaaataag 346 Query: 641 gaggtcacacagtggcttgatgcagccctcgct 673 || ||||||| ||||||||||||||||||||| Sbjct: 345 aagatcacacaatggcttgatgcagccctcgct 313 Score = 69.9 bits (35), Expect = 1e-08 Identities = 71/79 (89%), Gaps = 3/79 (3%) Strand = Plus / Minus Query: 31 ttgcagaagct-caactcaggctataca-gtagcaaaatagtgcacaccatact-aaaga 87 ||||||||||| | |||||||||||||| |||||||||| ||||||||||||| ||||| Sbjct: 1056 ttgcagaagcttcgactcaggctatacaagtagcaaaatgttgcacaccatactaaaaga 997 Query: 88 tgcaacccctacatagtag 106 ||||| | ||||||||||| Sbjct: 996 tgcaaacactacatagtag 978
>dbj|AK099336.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020P11, full insert sequence Length = 2104 Score = 236 bits (119), Expect = 8e-59 Identities = 235/273 (86%), Gaps = 3/273 (1%) Strand = Plus / Minus Query: 401 atcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttc 460 |||||| ||||| ||||||||||| |||||||||||||||||||| || |||||||| || Sbjct: 1625 atcatcctcctcatccatccagtaggcctcaagaatcttcacagctttttcatagatctc 1566 Query: 461 attgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatcat 520 |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 1565 attgttatcatggctctgcaagttctcaatcttttccaaaccttccgcttcatcaatcat 1506 Query: 521 ctgtgcatagacatttccctccccagaagcacccaaattcttatcagtctctccaacttt 580 ||| | | ||||||| | || || ||| |||| |||| || || ||||| ||||| Sbjct: 1505 ctgggaaaagacattcacatcacc---tgcagccaaggtcttgtcggtttctcctacttt 1449 Query: 581 gagaatgttctcaagaccctccaagcaaactgtaacgattcttggatctgggcaaaggag 640 ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| || Sbjct: 1448 aagaatgttctcgagaccctccaaacaaactgtaacgattcttatatctgggcaaataag 1389 Query: 641 gaggtcacacagtggcttgatgcagccctcgct 673 || ||||||| ||||||||||||||||||||| Sbjct: 1388 aagatcacacaatggcttgatgcagccctcgct 1356 Score = 69.9 bits (35), Expect = 1e-08 Identities = 71/79 (89%), Gaps = 3/79 (3%) Strand = Plus / Minus Query: 31 ttgcagaagct-caactcaggctataca-gtagcaaaatagtgcacaccatact-aaaga 87 ||||||||||| | |||||||||||||| |||||||||| ||||||||||||| ||||| Sbjct: 1975 ttgcagaagcttcgactcaggctatacaagtagcaaaatgttgcacaccatactaaaaga 1916 Query: 88 tgcaacccctacatagtag 106 ||||| | ||||||||||| Sbjct: 1915 tgcaaacactacatagtag 1897
>dbj|AK068233.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149A11, full insert sequence Length = 2143 Score = 236 bits (119), Expect = 8e-59 Identities = 235/273 (86%), Gaps = 3/273 (1%) Strand = Plus / Minus Query: 401 atcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttc 460 |||||| ||||| ||||||||||| |||||||||||||||||||| || |||||||| || Sbjct: 1664 atcatcctcctcatccatccagtaggcctcaagaatcttcacagctttttcatagatctc 1605 Query: 461 attgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatcat 520 |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 1604 attgttatcatggctctgcaagttctcaatcttttccaaaccttccgcttcatcaatcat 1545 Query: 521 ctgtgcatagacatttccctccccagaagcacccaaattcttatcagtctctccaacttt 580 ||| | | ||||||| | || || ||| |||| |||| || || ||||| ||||| Sbjct: 1544 ctgggaaaagacattcacatcacc---tgcagccaaggtcttgtcggtttctcctacttt 1488 Query: 581 gagaatgttctcaagaccctccaagcaaactgtaacgattcttggatctgggcaaaggag 640 ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| || Sbjct: 1487 aagaatgttctcgagaccctccaaacaaactgtaacgattcttatatctgggcaaataag 1428 Query: 641 gaggtcacacagtggcttgatgcagccctcgct 673 || ||||||| ||||||||||||||||||||| Sbjct: 1427 aagatcacacaatggcttgatgcagccctcgct 1395 Score = 69.9 bits (35), Expect = 1e-08 Identities = 71/79 (89%), Gaps = 3/79 (3%) Strand = Plus / Minus Query: 31 ttgcagaagct-caactcaggctataca-gtagcaaaatagtgcacaccatact-aaaga 87 ||||||||||| | |||||||||||||| |||||||||| ||||||||||||| ||||| Sbjct: 2014 ttgcagaagcttcgactcaggctatacaagtagcaaaatgttgcacaccatactaaaaga 1955 Query: 88 tgcaacccctacatagtag 106 ||||| | ||||||||||| Sbjct: 1954 tgcaaacactacatagtag 1936
>dbj|AB004814.1| Oryza sativa (japonica cultivar-group) DNA for NLS receptor, complete cds Length = 6530 Score = 236 bits (119), Expect = 8e-59 Identities = 235/273 (86%), Gaps = 3/273 (1%) Strand = Plus / Minus Query: 401 atcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttc 460 |||||| ||||| ||||||||||| |||||||||||||||||||| || |||||||| || Sbjct: 5926 atcatcctcctcatccatccagtaggcctcaagaatcttcacagctttttcatagatctc 5867 Query: 461 attgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatcat 520 |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 5866 attgttatcatggctctgcaagttctcaatcttttccaaaccttccgcttcatcaatcat 5807 Query: 521 ctgtgcatagacatttccctccccagaagcacccaaattcttatcagtctctccaacttt 580 ||| | | ||||||| | || || ||| |||| |||| || || ||||| ||||| Sbjct: 5806 ctgggaaaagacattcacatcacc---tgcagccaaggtcttgtcggtttctcctacttt 5750 Query: 581 gagaatgttctcaagaccctccaagcaaactgtaacgattcttggatctgggcaaaggag 640 ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| || Sbjct: 5749 aagaatgttctcgagaccctccaaacaaactgtaacgattcttatatctgggcaaataag 5690 Query: 641 gaggtcacacagtggcttgatgcagccctcgct 673 || ||||||| ||||||||||||||||||||| Sbjct: 5689 aagatcacacaatggcttgatgcagccctcgct 5657 Score = 69.9 bits (35), Expect = 1e-08 Identities = 71/79 (89%), Gaps = 3/79 (3%) Strand = Plus / Minus Query: 31 ttgcagaagct-caactcaggctataca-gtagcaaaatagtgcacaccatact-aaaga 87 ||||||||||| | |||||||||||||| |||||||||| ||||||||||||| ||||| Sbjct: 6400 ttgcagaagcttcgactcaggctatacaagtagcaaaatgttgcacaccatactaaaaga 6341 Query: 88 tgcaacccctacatagtag 106 ||||| | ||||||||||| Sbjct: 6340 tgcaaacactacatagtag 6322
>dbj|AB004660.1| Oryza sativa mRNA for NLS receptor, complete cds Length = 2090 Score = 236 bits (119), Expect = 8e-59 Identities = 235/273 (86%), Gaps = 3/273 (1%) Strand = Plus / Minus Query: 401 atcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttc 460 |||||| ||||| ||||||||||| |||||||||||||||||||| || |||||||| || Sbjct: 1602 atcatcctcctcatccatccagtaggcctcaagaatcttcacagctttttcatagatctc 1543 Query: 461 attgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatcat 520 |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 1542 attgttatcatggctctgcaagttctcaatcttttccaaaccttccgcttcatcaatcat 1483 Query: 521 ctgtgcatagacatttccctccccagaagcacccaaattcttatcagtctctccaacttt 580 ||| | | ||||||| | || || ||| |||| |||| || || ||||| ||||| Sbjct: 1482 ctgggaaaagacattcacatcacc---tgcagccaaggtcttgtcggtttctcctacttt 1426 Query: 581 gagaatgttctcaagaccctccaagcaaactgtaacgattcttggatctgggcaaaggag 640 ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| || Sbjct: 1425 aagaatgttctcgagaccctccaaacaaactgtaacgattcttatatctgggcaaataag 1366 Query: 641 gaggtcacacagtggcttgatgcagccctcgct 673 || ||||||| ||||||||||||||||||||| Sbjct: 1365 aagatcacacaatggcttgatgcagccctcgct 1333 Score = 69.9 bits (35), Expect = 1e-08 Identities = 71/79 (89%), Gaps = 3/79 (3%) Strand = Plus / Minus Query: 31 ttgcagaagct-caactcaggctataca-gtagcaaaatagtgcacaccatact-aaaga 87 ||||||||||| | |||||||||||||| |||||||||| ||||||||||||| ||||| Sbjct: 1952 ttgcagaagcttcgactcaggctatacaagtagcaaaatgttgcacaccatactaaaaga 1893 Query: 88 tgcaacccctacatagtag 106 ||||| | ||||||||||| Sbjct: 1892 tgcaaacactacatagtag 1874
>gb|AF005265.1| Oryza sativa importin mRNA, complete cds Length = 2038 Score = 220 bits (111), Expect = 5e-54 Identities = 233/273 (85%), Gaps = 3/273 (1%) Strand = Plus / Minus Query: 401 atcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttc 460 |||||| ||||| ||||||||||| |||||||||||||||||||| || |||||||| || Sbjct: 1568 atcatcctcctcatccatccagtaggcctcaagaatcttcacagctttttcatagatctc 1509 Query: 461 attgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatcat 520 ||||||||||||||||| | ||||||||||||||||| ||||| |||||||||||||| Sbjct: 1508 attgttatcatggctctcgaagttctcaatcttttccaaaccttccgcttcatcaatcat 1449 Query: 521 ctgtgcatagacatttccctccccagaagcacccaaattcttatcagtctctccaacttt 580 ||| | | ||||||| | || || ||| |||| |||| || || ||||| ||||| Sbjct: 1448 ctgggaaaagacattcacatcacc---tgcagccaaggtcttgtcggtttctcctacttt 1392 Query: 581 gagaatgttctcaagaccctccaagcaaactgtaacgattcttggatctgggcaaaggag 640 ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| || Sbjct: 1391 aagaatgttctcgagaccctccaaacaaactgtaacgattcttatatctgggcaaataag 1332 Query: 641 gaggtcacacagtggcttgatgcagccctcgct 673 || ||||||| ||||||||||||||||||||| Sbjct: 1331 aagatcacacaatggcttgatgcagccctcgct 1299 Score = 69.9 bits (35), Expect = 1e-08 Identities = 71/79 (89%), Gaps = 3/79 (3%) Strand = Plus / Minus Query: 31 ttgcagaagct-caactcaggctataca-gtagcaaaatagtgcacaccatact-aaaga 87 ||||||||||| | |||||||||||||| |||||||||| ||||||||||||| ||||| Sbjct: 1918 ttgcagaagcttcgactcaggctatacaagtagcaaaatgttgcacaccatactaaaaga 1859 Query: 88 tgcaacccctacatagtag 106 ||||| | ||||||||||| Sbjct: 1858 tgcaaacactacatagtag 1840
>gb|AY103821.1| Zea mays PCO084551 mRNA sequence Length = 2318 Score = 184 bits (93), Expect = 3e-43 Identities = 227/271 (83%), Gaps = 3/271 (1%) Strand = Plus / Minus Query: 399 gcatcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatt 458 ||||||||||||||||||| |||||| | || || |||||||||||||||||||| || Sbjct: 1616 gcatcatcttcctcctccagccagtaggattccagcatcttcacagccttctcatatatc 1557 Query: 459 tcattgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatc 518 || |||| |||||||||||||||||||||||||| |||||||| || || ||||||||| Sbjct: 1556 tcggtgttgtcatggctctgcaggttctcaatcttgtccaggccctcagcatcatcaatc 1497 Query: 519 atctgtgcatagacatttccctccccagaagcacccaaattcttatcagtctctccaact 578 |||||||| || ||||| | || || ||||| | ||| || || | ||| |||||| Sbjct: 1496 atctgtgcgtaaacattgacatcgcc---tgcaccaagatttttctctgcctcgccaact 1440 Query: 579 ttgagaatgttctcaagaccctccaagcaaactgtaacgattcttggatctgggcaaagg 638 || || ||||||||||||||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 1439 ttcaggatgttctcaagaccctccaagcaaactgttacgattctgggatccgggcaaaca 1380 Query: 639 aggaggtcacacagtggcttgatgcagccct 669 || || ||||| |||||||| ||||| |||| Sbjct: 1379 agcagatcacagagtggcttaatgcaaccct 1349
>gb|AY103576.1| Zea mays PCO130039 mRNA sequence Length = 2710 Score = 178 bits (90), Expect = 2e-41 Identities = 120/130 (92%) Strand = Plus / Minus Query: 394 ccatcgcatcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcat 453 |||| |||||||||||||||||||||||||||| |||||||| |||||||||||| |||| Sbjct: 1657 ccattgcatcatcttcctcctccatccagtaagtctcaagaagcttcacagccttttcat 1598 Query: 454 agatttcattgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcat 513 |||||||||| |||||||||||||| |||||||| ||||||||||||||||| || || | Sbjct: 1597 agatttcattattatcatggctctgtaggttctcgatcttttccaggccttccgcgtcgt 1538 Query: 514 caatcatctg 523 |||||||||| Sbjct: 1537 caatcatctg 1528 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Minus Query: 576 actttgagaatgttctcaagaccctccaagcaaactgtaacgattcttggatctgggcaa 635 ||||| ||||| |||||||||||||||| |||||||| || ||||| ||||| |||||| Sbjct: 1475 actttaagaatattctcaagaccctccagacaaactgttacaattctcggatcagggcaa 1416 Query: 636 aggaggaggtcacacagtggcttgatgcagccctc 670 | || ||||| ||||| ||| |||||||||||| Sbjct: 1415 acaagaaggtcgcacagcggcacgatgcagccctc 1381 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 335 agggttgccaccttggccaaagtcaaa 361 ||||||||||||||||| ||||||||| Sbjct: 1713 agggttgccaccttggctaaagtcaaa 1687
>gb|AY108183.1| Zea mays PCO130036 mRNA sequence Length = 1271 Score = 170 bits (86), Expect = 4e-39 Identities = 113/122 (92%) Strand = Plus / Minus Query: 402 tcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttca 461 ||||||||||||||||||||||| | |||||||| |||||||||||| |||||||||||| Sbjct: 683 tcatcttcctcctccatccagtatgtctcaagaagcttcacagccttttcatagatttca 624 Query: 462 ttgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatcatc 521 |||||||| |||||||| |||||||| ||||||||||||||||| |||||||| |||||| Sbjct: 623 ttgttatcgtggctctgtaggttctcgatcttttccaggccttccgcttcatcgatcatc 564 Query: 522 tg 523 || Sbjct: 563 tg 562 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 576 actttgagaatgttctcaagaccctccaagcaaactgtaacgattcttggatctgggcaa 635 ||||| ||||| ||||| |||||||||| |||||||| || ||||| ||||| ||||| Sbjct: 509 actttaagaatattctccagaccctccagacaaactgttacaattctcggatcagggcag 450 Query: 636 aggaggaggtcacacagtggcttgatgcagccctc 670 | || |||||||||| |||||||||||||||||| Sbjct: 449 acaagaaggtcacacaatggcttgatgcagccctc 415
>gb|BT009445.1| Triticum aestivum clone wlmk8.pk0008.e8:fis, full insert mRNA sequence Length = 2162 Score = 137 bits (69), Expect = 5e-29 Identities = 114/129 (88%) Strand = Plus / Minus Query: 402 tcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttca 461 |||||||||||||||| |||||| | ||| || |||||||| ||||||||||| ||||| Sbjct: 1585 tcatcttcctcctccaaccagtaggactcgagcatcttcactgccttctcatatatttct 1526 Query: 462 ttgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatcatc 521 |||| ||||||||||| |||||||||||||||||||| || || || |||||||||||| Sbjct: 1525 gtgttgtcatggctctgaaggttctcaatcttttccagtccctcagcatcatcaatcatc 1466 Query: 522 tgtgcatag 530 ||||||||| Sbjct: 1465 tgtgcatag 1457 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 585 atgttctcaagaccctccaagcaaactgtaacgattcttggatctgggcaaaggaggagg 644 ||||| |||||||| |||||||||||||| || ||||| ||||| ||||||| ||| || Sbjct: 1405 atgttttcaagaccttccaagcaaactgttacaattctgggatccgggcaaatgagcaga 1346 Query: 645 tcacacagtggcttgatgcagccct 669 ||||| || ||||||||||| |||| Sbjct: 1345 tcacagagcggcttgatgcaaccct 1321
>ref|NM_180193.1| Arabidopsis thaliana AT-IMP; protein transporter AT3G06720 (AT-IMP) transcript variant AT3G06720.2 mRNA, complete cds Length = 2256 Score = 119 bits (60), Expect = 1e-23 Identities = 105/120 (87%) Strand = Plus / Minus Query: 400 catcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagattt 459 ||||||||||||| || | |||||| | ||| ||||| || ||||||||||||||||| | Sbjct: 1672 catcatcttcctcttcaagccagtatgtctccagaattttaacagccttctcatagatct 1613 Query: 460 cattgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatca 519 ||||||| ||||||||||| |||||||| |||||||| || |||||||| |||||||||| Sbjct: 1612 cattgttgtcatggctctgaaggttctcgatcttttctagcccttctgcatcatcaatca 1553 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 gattcttggatctgggcaaa 636 |||||||||||||||||||| Sbjct: 1455 gattcttggatctgggcaaa 1436
>ref|NM_111552.3| Arabidopsis thaliana AT-IMP; protein transporter AT3G06720 (AT-IMP) transcript variant AT3G06720.1 mRNA, complete cds Length = 2330 Score = 119 bits (60), Expect = 1e-23 Identities = 105/120 (87%) Strand = Plus / Minus Query: 400 catcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagattt 459 ||||||||||||| || | |||||| | ||| ||||| || ||||||||||||||||| | Sbjct: 1736 catcatcttcctcttcaagccagtatgtctccagaattttaacagccttctcatagatct 1677 Query: 460 cattgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatca 519 ||||||| ||||||||||| |||||||| |||||||| || |||||||| |||||||||| Sbjct: 1676 cattgttgtcatggctctgaaggttctcgatcttttctagcccttctgcatcatcaatca 1617 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 gattcttggatctgggcaaa 636 |||||||||||||||||||| Sbjct: 1519 gattcttggatctgggcaaa 1500
>ref|NM_185275.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1605 Score = 119 bits (60), Expect = 1e-23 Identities = 114/132 (86%) Strand = Plus / Minus Query: 399 gcatcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatt 458 ||||||||||||||||||| |||||| | ||| || || || || ||||||||||| ||| Sbjct: 1517 gcatcatcttcctcctccaaccagtaggactcgagcattttaactgccttctcatatatt 1458 Query: 459 tcattgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatc 518 ||| |||| ||||||||||| |||||||||||||| ||||| || || || ||||||||| Sbjct: 1457 tcagtgttgtcatggctctgaaggttctcaatcttctccagtccctcagcatcatcaatc 1398 Query: 519 atctgtgcatag 530 ||||| |||||| Sbjct: 1397 atctgagcatag 1386 Score = 89.7 bits (45), Expect = 1e-14 Identities = 75/85 (88%) Strand = Plus / Minus Query: 585 atgttctcaagaccctccaagcaaactgtaacgattcttggatctgggcaaaggaggagg 644 |||||||||||||| |||||||||||||| ||||| || ||||||||||||| || || Sbjct: 1334 atgttctcaagaccttccaagcaaactgtcacgatcctgggatctgggcaaacaagcaga 1275 Query: 645 tcacacagtggcttgatgcagccct 669 ||||| |||||||||||||| |||| Sbjct: 1274 tcacagagtggcttgatgcaaccct 1250
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 119 bits (60), Expect = 1e-23 Identities = 114/132 (86%) Strand = Plus / Plus Query: 399 gcatcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatt 458 ||||||||||||||||||| |||||| | ||| || || || || ||||||||||| ||| Sbjct: 69444 gcatcatcttcctcctccaaccagtaggactcgagcattttaactgccttctcatatatt 69503 Query: 459 tcattgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatc 518 ||| |||| ||||||||||| |||||||||||||| ||||| || || || ||||||||| Sbjct: 69504 tcagtgttgtcatggctctgaaggttctcaatcttctccagtccctcagcatcatcaatc 69563 Query: 519 atctgtgcatag 530 ||||| |||||| Sbjct: 69564 atctgagcatag 69575 Score = 89.7 bits (45), Expect = 1e-14 Identities = 75/85 (88%) Strand = Plus / Plus Query: 585 atgttctcaagaccctccaagcaaactgtaacgattcttggatctgggcaaaggaggagg 644 |||||||||||||| |||||||||||||| ||||| || ||||||||||||| || || Sbjct: 69627 atgttctcaagaccttccaagcaaactgtcacgatcctgggatctgggcaaacaagcaga 69686 Query: 645 tcacacagtggcttgatgcagccct 669 ||||| |||||||||||||| |||| Sbjct: 69687 tcacagagtggcttgatgcaaccct 69711
>gb|AC023912.5|ATAC023912 Arabidopsis thaliana chromosome III BAC F3E22 genomic sequence, complete sequence Length = 63767 Score = 119 bits (60), Expect = 1e-23 Identities = 105/120 (87%) Strand = Plus / Plus Query: 400 catcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagattt 459 ||||||||||||| || | |||||| | ||| ||||| || ||||||||||||||||| | Sbjct: 42981 catcatcttcctcttcaagccagtatgtctccagaattttaacagccttctcatagatct 43040 Query: 460 cattgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatca 519 ||||||| ||||||||||| |||||||| |||||||| || |||||||| |||||||||| Sbjct: 43041 cattgttgtcatggctctgaaggttctcgatcttttctagcccttctgcatcatcaatca 43100 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 617 gattcttggatctgggcaaa 636 |||||||||||||||||||| Sbjct: 43198 gattcttggatctgggcaaa 43217
>emb|Y15224.1|ATIMPA1 Arabidopsis thaliana mRNA for importin alpha-like protein Impa1 Length = 1876 Score = 119 bits (60), Expect = 1e-23 Identities = 105/120 (87%) Strand = Plus / Minus Query: 400 catcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagattt 459 ||||||||||||| || | |||||| | ||| ||||| || ||||||||||||||||| | Sbjct: 1559 catcatcttcctcttcaagccagtatgtctccagaattttaacagccttctcatagatct 1500 Query: 460 cattgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatca 519 ||||||| ||||||||||| |||||||| |||||||| || |||||||| |||||||||| Sbjct: 1499 cattgttgtcatggctctgaaggttctcgatcttttctagcccttctgcatcatcaatca 1440 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 gattcttggatctgggcaaa 636 |||||||||||||||||||| Sbjct: 1342 gattcttggatctgggcaaa 1323
>gb|AY125529.1| Arabidopsis thaliana AT3g06720/F3E22_14 mRNA, complete cds Length = 1599 Score = 119 bits (60), Expect = 1e-23 Identities = 105/120 (87%) Strand = Plus / Minus Query: 400 catcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagattt 459 ||||||||||||| || | |||||| | ||| ||||| || ||||||||||||||||| | Sbjct: 1501 catcatcttcctcttcaagccagtatgtctccagaattttaacagccttctcatagatct 1442 Query: 460 cattgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatca 519 ||||||| ||||||||||| |||||||| |||||||| || |||||||| |||||||||| Sbjct: 1441 cattgttgtcatggctctgaaggttctcgatcttttctagcccttctgcatcatcaatca 1382 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 gattcttggatctgggcaaa 636 |||||||||||||||||||| Sbjct: 1284 gattcttggatctgggcaaa 1265
>gb|AY094390.1| Arabidopsis thaliana AT3g06720/F3E22_14 mRNA, complete cds Length = 2001 Score = 119 bits (60), Expect = 1e-23 Identities = 105/120 (87%) Strand = Plus / Minus Query: 400 catcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagattt 459 ||||||||||||| || | |||||| | ||| ||||| || ||||||||||||||||| | Sbjct: 1562 catcatcttcctcttcaagccagtatgtctccagaattttaacagccttctcatagatct 1503 Query: 460 cattgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatca 519 ||||||| ||||||||||| |||||||| |||||||| || |||||||| |||||||||| Sbjct: 1502 cattgttgtcatggctctgaaggttctcgatcttttctagcccttctgcatcatcaatca 1443 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 gattcttggatctgggcaaa 636 |||||||||||||||||||| Sbjct: 1345 gattcttggatctgggcaaa 1326
>gb|AY054164.1| Arabidopsis thaliana AT3g06720/F3E22_14 mRNA, complete cds Length = 2134 Score = 119 bits (60), Expect = 1e-23 Identities = 105/120 (87%) Strand = Plus / Minus Query: 400 catcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagattt 459 ||||||||||||| || | |||||| | ||| ||||| || ||||||||||||||||| | Sbjct: 1672 catcatcttcctcttcaagccagtatgtctccagaattttaacagccttctcatagatct 1613 Query: 460 cattgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatca 519 ||||||| ||||||||||| |||||||| |||||||| || |||||||| |||||||||| Sbjct: 1612 cattgttgtcatggctctgaaggttctcgatcttttctagcccttctgcatcatcaatca 1553 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 gattcttggatctgggcaaa 636 |||||||||||||||||||| Sbjct: 1455 gattcttggatctgggcaaa 1436
>gb|U69533.2|ATU69533 Arabidopsis thaliana AtKAP alpha mRNA, complete cds Length = 1940 Score = 119 bits (60), Expect = 1e-23 Identities = 105/120 (87%) Strand = Plus / Minus Query: 400 catcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagattt 459 ||||||||||||| || | |||||| | ||| ||||| || ||||||||||||||||| | Sbjct: 1501 catcatcttcctcttcaagccagtatgtctccagaattttaacagccttctcatagatct 1442 Query: 460 cattgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatca 519 ||||||| ||||||||||| |||||||| |||||||| || |||||||| |||||||||| Sbjct: 1441 cattgttgtcatggctctgaaggttctcgatcttttctagcccttctgcatcatcaatca 1382 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 gattcttggatctgggcaaa 636 |||||||||||||||||||| Sbjct: 1284 gattcttggatctgggcaaa 1265
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 119 bits (60), Expect = 1e-23 Identities = 114/132 (86%) Strand = Plus / Plus Query: 399 gcatcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatt 458 ||||||||||||||||||| |||||| | ||| || || || || ||||||||||| ||| Sbjct: 3191727 gcatcatcttcctcctccaaccagtaggactcgagcattttaactgccttctcatatatt 3191786 Query: 459 tcattgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatc 518 ||| |||| ||||||||||| |||||||||||||| ||||| || || || ||||||||| Sbjct: 3191787 tcagtgttgtcatggctctgaaggttctcaatcttctccagtccctcagcatcatcaatc 3191846 Query: 519 atctgtgcatag 530 ||||| |||||| Sbjct: 3191847 atctgagcatag 3191858 Score = 89.7 bits (45), Expect = 1e-14 Identities = 75/85 (88%) Strand = Plus / Plus Query: 585 atgttctcaagaccctccaagcaaactgtaacgattcttggatctgggcaaaggaggagg 644 |||||||||||||| |||||||||||||| ||||| || ||||||||||||| || || Sbjct: 3191910 atgttctcaagaccttccaagcaaactgtcacgatcctgggatctgggcaaacaagcaga 3191969 Query: 645 tcacacagtggcttgatgcagccct 669 ||||| |||||||||||||| |||| Sbjct: 3191970 tcacagagtggcttgatgcaaccct 3191994
>gb|AY088732.1| Arabidopsis thaliana clone 9351 mRNA, complete sequence Length = 2203 Score = 119 bits (60), Expect = 1e-23 Identities = 105/120 (87%) Strand = Plus / Minus Query: 400 catcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagattt 459 ||||||||||||| || | |||||| | ||| ||||| || ||||||||||||||||| | Sbjct: 1738 catcatcttcctcttcaagccagtatgtctccagaattttaacagccttctcatagatct 1679 Query: 460 cattgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatca 519 ||||||| ||||||||||| |||||||| |||||||| || |||||||| |||||||||| Sbjct: 1678 cattgttgtcatggctctgaaggttctcgatcttttctagcccttctgcatcatcaatca 1619 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 gattcttggatctgggcaaa 636 |||||||||||||||||||| Sbjct: 1521 gattcttggatctgggcaaa 1502
>dbj|AK100133.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010D07, full insert sequence Length = 2275 Score = 119 bits (60), Expect = 1e-23 Identities = 114/132 (86%) Strand = Plus / Minus Query: 399 gcatcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatt 458 ||||||||||||||||||| |||||| | ||| || || || || ||||||||||| ||| Sbjct: 1649 gcatcatcttcctcctccaaccagtaggactcgagcattttaactgccttctcatatatt 1590 Query: 459 tcattgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatc 518 ||| |||| ||||||||||| |||||||||||||| ||||| || || || ||||||||| Sbjct: 1589 tcagtgttgtcatggctctgaaggttctcaatcttctccagtccctcagcatcatcaatc 1530 Query: 519 atctgtgcatag 530 ||||| |||||| Sbjct: 1529 atctgagcatag 1518 Score = 89.7 bits (45), Expect = 1e-14 Identities = 75/85 (88%) Strand = Plus / Minus Query: 585 atgttctcaagaccctccaagcaaactgtaacgattcttggatctgggcaaaggaggagg 644 |||||||||||||| |||||||||||||| ||||| || ||||||||||||| || || Sbjct: 1466 atgttctcaagaccttccaagcaaactgtcacgatcctgggatctgggcaaacaagcaga 1407 Query: 645 tcacacagtggcttgatgcagccct 669 ||||| |||||||||||||| |||| Sbjct: 1406 tcacagagtggcttgatgcaaccct 1382
>gb|L81172.1|L81172 Arabidopsis thaliana importin alpha homolog mRNA, complete cds Length = 1956 Score = 119 bits (60), Expect = 1e-23 Identities = 105/120 (87%) Strand = Plus / Minus Query: 400 catcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagattt 459 ||||||||||||| || | |||||| | ||| ||||| || ||||||||||||||||| | Sbjct: 1566 catcatcttcctcttcaagccagtatgtctccagaattttaacagccttctcatagatct 1507 Query: 460 cattgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatca 519 ||||||| ||||||||||| |||||||| |||||||| || |||||||| |||||||||| Sbjct: 1506 cattgttgtcatggctctgaaggttctcgatcttttctagcccttctgcatcatcaatca 1447 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 gattcttggatctgggcaaa 636 |||||||||||||||||||| Sbjct: 1349 gattcttggatctgggcaaa 1330
>gb|AF077528.1|AF077528 Arabidopsis thaliana importin alpha mRNA, complete cds Length = 1939 Score = 119 bits (60), Expect = 1e-23 Identities = 105/120 (87%) Strand = Plus / Minus Query: 400 catcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagattt 459 ||||||||||||| || | |||||| | ||| ||||| || ||||||||||||||||| | Sbjct: 1549 catcatcttcctcttcaagccagtatgtctccagaattttaacagccttctcatagatct 1490 Query: 460 cattgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatca 519 ||||||| ||||||||||| |||||||| |||||||| || |||||||| |||||||||| Sbjct: 1489 cattgttgtcatggctctgaaggttctcgatcttttctagcccttctgcatcatcaatca 1430 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 gattcttggatctgggcaaa 636 |||||||||||||||||||| Sbjct: 1332 gattcttggatctgggcaaa 1313
>dbj|AB024311.1| Oryza sativa (japonica cultivar-group) mRNA for importin alpha 1b, complete cds Length = 2632 Score = 119 bits (60), Expect = 1e-23 Identities = 114/132 (86%) Strand = Plus / Minus Query: 399 gcatcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatt 458 ||||||||||||||||||| |||||| | ||| || || || || ||||||||||| ||| Sbjct: 1661 gcatcatcttcctcctccaaccagtaggactcgagcattttaactgccttctcatatatt 1602 Query: 459 tcattgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatc 518 ||| |||| ||||||||||| |||||||||||||| ||||| || || || ||||||||| Sbjct: 1601 tcagtgttgtcatggctctgaaggttctcaatcttctccagtccctcagcatcatcaatc 1542 Query: 519 atctgtgcatag 530 ||||| |||||| Sbjct: 1541 atctgagcatag 1530 Score = 89.7 bits (45), Expect = 1e-14 Identities = 75/85 (88%) Strand = Plus / Minus Query: 585 atgttctcaagaccctccaagcaaactgtaacgattcttggatctgggcaaaggaggagg 644 |||||||||||||| |||||||||||||| ||||| || ||||||||||||| || || Sbjct: 1478 atgttctcaagaccttccaagcaaactgtcacgatcctgggatctgggcaaacaagcaga 1419 Query: 645 tcacacagtggcttgatgcagccct 669 ||||| |||||||||||||| |||| Sbjct: 1418 tcacagagtggcttgatgcaaccct 1394
>gb|BT013664.1| Lycopersicon esculentum clone 132483R, mRNA sequence Length = 2159 Score = 105 bits (53), Expect = 2e-19 Identities = 110/129 (85%) Strand = Plus / Minus Query: 402 tcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttca 461 ||||| |||||||||| |||||| | ||| || || || |||||||||||||| |||||| Sbjct: 1573 tcatcctcctcctccaaccagtatgtctccagtattttaacagccttctcatatatttca 1514 Query: 462 ttgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatcatc 521 ||||||||||| ||||| ||||| ||||||||||||| || || || |||||||||| | Sbjct: 1513 ttgttatcatgactctgaaggttttcaatcttttccaatccctcagcatcatcaatcagc 1454 Query: 522 tgtgcatag 530 || |||||| Sbjct: 1453 tgagcatag 1445
>dbj|AK222141.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL22-98-D24 Length = 716 Score = 105 bits (53), Expect = 2e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 402 tcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttca 461 ||||||||||| |||| |||||| | |||||||||||||| ||||||||||||||||| Sbjct: 100 tcatcttcctcttccaaccagtacgtttcaagaatcttcactgccttctcatagatttcg 41 Query: 462 ttgttatcatggctctgcaggttctcaatcttttcca 498 |||| ||||| |||||||| |||||||||||||||| Sbjct: 40 ctgttgtcatgactctgcagattctcaatcttttcca 4
>ref|NM_117708.1| Arabidopsis thaliana protein transporter AT4G16143 mRNA, complete cds Length = 2013 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Minus Query: 402 tcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttca 461 ||||||||||| |||| |||||| | |||||||||||||| ||||||||||||||||| Sbjct: 1581 tcatcttcctcttccaaccagtacgtttcaagaatcttcactgccttctcatagatttcg 1522 Query: 462 ttgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatcatc 521 |||| ||||| |||||||| |||||||||||||| | || || || ||||| |||| | Sbjct: 1521 ctgttgtcatgactctgcagattctcaatcttttctaatccctcagcatcatcgatcagc 1462 Query: 522 tgtgcata 529 |||||||| Sbjct: 1461 tgtgcata 1454
>emb|Z97340.2|ATFCA5 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 5 Length = 209164 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 402 tcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttca 461 ||||||||||| |||| |||||| | |||||||||||||| ||||||||||||||||| Sbjct: 101201 tcatcttcctcttccaaccagtacgtttcaagaatcttcactgccttctcatagatttcg 101260 Query: 462 ttgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatcatc 521 |||| ||||| |||||||| |||||||||||||| | || || || ||||| |||| | Sbjct: 101261 ctgttgtcatgactctgcagattctcaatcttttctaatccctcagcatcatcgatcagc 101320 Query: 522 tgtgcata 529 |||||||| Sbjct: 101321 tgtgcata 101328
>gb|BT000157.1| Arabidopsis thaliana unknown protein (not annotated) mRNA, complete cds Length = 978 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Minus Query: 402 tcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttca 461 ||||||||||| |||| |||||| | |||||||||||||| ||||||||||||||||| Sbjct: 851 tcatcttcctcttccaaccagtacgtttcaagaatcttcactgccttctcatagatttcg 792 Query: 462 ttgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatcatc 521 |||| ||||| |||||||| |||||||||||||| | || || || ||||| |||| | Sbjct: 791 ctgttgtcatgactctgcagattctcaatcttttctaatccctcagcatcatcgatcagc 732 Query: 522 tgtgcata 529 |||||||| Sbjct: 731 tgtgcata 724
>emb|Y14615.1|ATIMPA2 Arabidopsis thaliana mRNA for importin alpha-like protein 2 Length = 1741 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Minus Query: 402 tcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttca 461 ||||||||||| |||| |||||| | |||||||||||||| ||||||||||||||||| Sbjct: 1547 tcatcttcctcttccaaccagtacgtttcaagaatcttcactgccttctcatagatttcg 1488 Query: 462 ttgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatcatc 521 |||| ||||| |||||||| |||||||||||||| | || || || ||||| |||| | Sbjct: 1487 ctgttgtcatgactctgcagattctcaatcttttctaatccctcagcatcatcgatcagc 1428 Query: 522 tgtgcata 529 |||||||| Sbjct: 1427 tgtgcata 1420
>emb|AL161543.2|ATCHRIV43 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 43 Length = 198226 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 402 tcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttca 461 ||||||||||| |||| |||||| | |||||||||||||| ||||||||||||||||| Sbjct: 70191 tcatcttcctcttccaaccagtacgtttcaagaatcttcactgccttctcatagatttcg 70250 Query: 462 ttgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatcatc 521 |||| ||||| |||||||| |||||||||||||| | || || || ||||| |||| | Sbjct: 70251 ctgttgtcatgactctgcagattctcaatcttttctaatccctcagcatcatcgatcagc 70310 Query: 522 tgtgcata 529 |||||||| Sbjct: 70311 tgtgcata 70318
>gb|AY136331.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 1447 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Minus Query: 402 tcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttca 461 ||||||||||| |||| |||||| | |||||||||||||| ||||||||||||||||| Sbjct: 1016 tcatcttcctcttccaaccagtacgtttcaagaatcttcactgccttctcatagatttcg 957 Query: 462 ttgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatcatc 521 |||| ||||| |||||||| |||||||||||||| | || || || ||||| |||| | Sbjct: 956 ctgttgtcatgactctgcagattctcaatcttttctaatccctcagcatcatcgatcagc 897 Query: 522 tgtgcata 529 |||||||| Sbjct: 896 tgtgcata 889
>gb|AF361811.1| Arabidopsis thaliana AT3g06720/F3E22_14 mRNA, complete cds Length = 2014 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Minus Query: 402 tcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttca 461 ||||||||||| |||| |||||| | |||||||||||||| ||||||||||||||||| Sbjct: 1582 tcatcttcctcttccaaccagtacgtttcaagaatcttcactgccttctcatagatttcg 1523 Query: 462 ttgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatcatc 521 |||| ||||| |||||||| |||||||||||||| | || || || ||||| |||| | Sbjct: 1522 ctgttgtcatgactctgcagattctcaatcttttctaatccctcagcatcatcgatcagc 1463 Query: 522 tgtgcata 529 |||||||| Sbjct: 1462 tgtgcata 1455
>gb|AY060529.1| Arabidopsis thaliana AT3g06720/F3E22_14 mRNA, complete cds Length = 1608 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Minus Query: 402 tcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttca 461 ||||||||||| |||| |||||| | |||||||||||||| ||||||||||||||||| Sbjct: 1514 tcatcttcctcttccaaccagtacgtttcaagaatcttcactgccttctcatagatttcg 1455 Query: 462 ttgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatcatc 521 |||| ||||| |||||||| |||||||||||||| | || || || ||||| |||| | Sbjct: 1454 ctgttgtcatgactctgcagattctcaatcttttctaatccctcagcatcatcgatcagc 1395 Query: 522 tgtgcata 529 |||||||| Sbjct: 1394 tgtgcata 1387
>emb|BX826439.1|CNS0A43E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB26ZF09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1938 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Minus Query: 402 tcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttca 461 ||||||||||| |||| |||||| | |||||||||||||| ||||||||||||||||| Sbjct: 1545 tcatcttcctcttccaaccagtacgtttcaagaatcttcactgccttctcatagatttcg 1486 Query: 462 ttgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatcatc 521 |||| ||||| |||||||| |||||||||||||| | || || || ||||| |||| | Sbjct: 1485 ctgttgtcatgactctgcagattctcaatcttttctaatccctcagcatcatcgatcagc 1426 Query: 522 tgtgcata 529 |||||||| Sbjct: 1425 tgtgcata 1418
>gb|AF369707.1| Capsicum annuum importin alpha 2 mRNA, complete cds Length = 2096 Score = 97.6 bits (49), Expect = 5e-17 Identities = 85/97 (87%) Strand = Plus / Minus Query: 402 tcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttca 461 ||||| |||||||||| |||||| | ||| || || || |||||||||||||| |||||| Sbjct: 1519 tcatcctcctcctccaaccagtatgtctccagtattttaacagccttctcatatatttca 1460 Query: 462 ttgttatcatggctctgcaggttctcaatcttttcca 498 ||||||||||| ||||| ||||| ||||||||||||| Sbjct: 1459 ttgttatcatgactctgaaggttttcaatcttttcca 1423
>gb|AC150843.16| Medicago truncatula clone mth2-103p8, complete sequence Length = 125707 Score = 95.6 bits (48), Expect = 2e-16 Identities = 108/128 (84%) Strand = Plus / Minus Query: 402 tcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttca 461 |||||||| ||||||| |||||| | ||||||||||||||||||||| ||||| || || Sbjct: 69777 tcatcttcttcctccaaccagtatgtctcaagaatcttcacagccttttcataaatctct 69718 Query: 462 ttgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatcatc 521 |||| ||||| ||||| ||||||||||| || |||| || || || |||||||||||| Sbjct: 69717 gtgttgtcatgactctggaggttctcaattttctccaacccctcagcatcatcaatcatc 69658 Query: 522 tgtgcata 529 || ||||| Sbjct: 69657 tgggcata 69650
>dbj|AB236757.1| Trifolium pratense RNA for putative importin alpha, complete cds, clone: C1528 Length = 1848 Score = 95.6 bits (48), Expect = 2e-16 Identities = 108/128 (84%) Strand = Plus / Minus Query: 402 tcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttca 461 |||||||| ||||||| |||||| | ||||||||||||||||||||| ||||| || || Sbjct: 1602 tcatcttcttcctccaaccagtatgtctcaagaatcttcacagccttttcataaatctct 1543 Query: 462 ttgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatcatc 521 |||||||||| ||||| ||||||||||| || |||| || || || ||||||||||| Sbjct: 1542 gtgttatcatgactctggaggttctcaattttctccaaaccctcagcatcatcaatcatt 1483 Query: 522 tgtgcata 529 || ||||| Sbjct: 1482 tgggcata 1475
>ref|NM_124308.1| Arabidopsis thaliana protein transporter AT5G49310 mRNA, complete cds Length = 1560 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 432 agaatcttcacagccttctcatagatttcattgttatcatggctctgcaggttctcaatc 491 |||||||||||||||||||| ||||| |||||||| ||||| ||||| |||||||||| Sbjct: 1454 agaatcttcacagccttctcgtagatctcattgttgccatggtgctgcaagttctcaatc 1395 Query: 492 ttttccaggccttctgcttcatcaatcat 520 ||||| || |||||||| || |||||||| Sbjct: 1394 ttttctagcccttctgcatcttcaatcat 1366
>gb|DQ447055.1| Arabidopsis thaliana clone pENTR221-At5g49310 importin alpha-1 subunit (At5g49310) mRNA, complete cds Length = 1290 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 432 agaatcttcacagccttctcatagatttcattgttatcatggctctgcaggttctcaatc 491 |||||||||||||||||||| ||||| |||||||| ||||| ||||| |||||||||| Sbjct: 1184 agaatcttcacagccttctcgtagatctcattgttgccatggtgctgcaagttctcaatc 1125 Query: 492 ttttccaggccttctgcttcatcaatcat 520 ||||| || |||||||| || |||||||| Sbjct: 1124 ttttctagcccttctgcatcttcaatcat 1096
>gb|DQ447054.1| Arabidopsis thaliana clone pENTR221-At5g49310 importin alpha-1 subunit (At5g49310) mRNA, complete cds Length = 1560 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 432 agaatcttcacagccttctcatagatttcattgttatcatggctctgcaggttctcaatc 491 |||||||||||||||||||| ||||| |||||||| ||||| ||||| |||||||||| Sbjct: 1454 agaatcttcacagccttctcgtagatctcattgttgccatggtgctgcaagttctcaatc 1395 Query: 492 ttttccaggccttctgcttcatcaatcat 520 ||||| || |||||||| || |||||||| Sbjct: 1394 ttttctagcccttctgcatcttcaatcat 1366
>dbj|AB016872.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21P3 Length = 86001 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 432 agaatcttcacagccttctcatagatttcattgttatcatggctctgcaggttctcaatc 491 |||||||||||||||||||| ||||| |||||||| ||||| ||||| |||||||||| Sbjct: 70231 agaatcttcacagccttctcgtagatctcattgttgccatggtgctgcaagttctcaatc 70290 Query: 492 ttttccaggccttctgcttcatcaatcat 520 ||||| || |||||||| || |||||||| Sbjct: 70291 ttttctagcccttctgcatcttcaatcat 70319
>gb|BT014529.1| Lycopersicon esculentum clone 133943R, mRNA sequence Length = 1946 Score = 85.7 bits (43), Expect = 2e-13 Identities = 88/103 (85%) Strand = Plus / Minus Query: 403 catcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttcat 462 ||||||||||||||| ||| |||| || || |||||||| || ||||||||||||||| Sbjct: 1573 catcttcctcctccaaccaataagtttcgaggatcttcactgctttctcatagatttcag 1514 Query: 463 tgttatcatggctctgcaggttctcaatcttttccaggccttc 505 |||| |||||||| || ||||| ||||||||||| || ||||| Sbjct: 1513 tgttgtcatggctttggaggttttcaatcttttctagaccttc 1471
>gb|AF017252.1|AF017252 Lycopersicon esculentum importin alpha (LeKAP alpha) mRNA, complete cds Length = 1907 Score = 85.7 bits (43), Expect = 2e-13 Identities = 88/103 (85%) Strand = Plus / Minus Query: 403 catcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttcat 462 ||||||||||||||| ||| |||| || || |||||||| || ||||||||||||||| Sbjct: 1501 catcttcctcctccaaccaataagtttcgaggatcttcactgctttctcatagatttcag 1442 Query: 463 tgttatcatggctctgcaggttctcaatcttttccaggccttc 505 |||| |||||||| || ||||| ||||||||||| || ||||| Sbjct: 1441 tgttgtcatggctttggaggttttcaatcttttctagaccttc 1399
>gb|AC157376.2| Medicago truncatula chromosome 7 BAC clone mth2-70d8, complete sequence Length = 87346 Score = 83.8 bits (42), Expect = 7e-13 Identities = 99/118 (83%) Strand = Plus / Plus Query: 402 tcatcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttca 461 ||||| || ||||||| |||||| | ||| ||||||||||||||||| ||||| || ||| Sbjct: 16002 tcatcgtcttcctccaaccagtatgtctcgagaatcttcacagccttttcataaatctca 16061 Query: 462 ttgttatcatggctctgcaggttctcaatcttttccaggccttctgcttcatcaatca 519 ||||| ||||| ||||| ||||||||||| || |||| || || ||||| ||||||| Sbjct: 16062 ttgttgtcatgactctggaggttctcaattttctccaaaccctcagcttcgtcaatca 16119
>gb|DQ252507.1| Solanum tuberosum clone 085H03 importin alpha 1-like mRNA, complete cds Length = 1618 Score = 73.8 bits (37), Expect = 7e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 588 ttctcaagaccctccaagcaaactgtaacgattcttggatctgggcaaaggaggaggtca 647 ||||| || ||||||||||| |||||||||||||| |||||||| |||| ||||| ||| Sbjct: 1339 ttctcgagcccctccaagcatactgtaacgattctgggatctggacaaattaggagatca 1280 Query: 648 cacagtggcttgatgca 664 || |||||||| ||||| Sbjct: 1279 catagtggcttaatgca 1263 Score = 40.1 bits (20), Expect = 9.2 Identities = 53/64 (82%) Strand = Plus / Minus Query: 435 atcttcacagccttctcatagatttcattgttatcatggctctgcaggttctcaatcttt 494 ||||| |||||||||||||| | ||||||||||| || | || || ||||||||||| Sbjct: 1492 atctttacagccttctcatataactcattgttatcgtgagtttgaagattctcaatcttg 1433 Query: 495 tcca 498 |||| Sbjct: 1432 tcca 1429
>ref|NM_001035934.1| Arabidopsis thaliana protein transporter AT1G09270 transcript variant AT1G09270.3 mRNA, complete cds Length = 2475 Score = 71.9 bits (36), Expect = 3e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 564 tcagtctctccaactttgagaatgttctcaagaccctccaagcaaactgtaacgattctt 623 |||| ||| ||||| ||||||||||| ||||||||||| | ||| ||||| ||||| ||| Sbjct: 1446 tcagcctcaccaaccttgagaatgttttcaagaccctcgaggcacactgtcacgatcctt 1387 Query: 624 ggatctgggcaaaggaggaggtcacacagtggcttgatgcagcc 667 ||||| ||||| | || || ||||| ||||| ||||||||||| Sbjct: 1386 ggatcagggcagattagaagatcacaaagtggtttgatgcagcc 1343
>ref|NM_179292.1| Arabidopsis thaliana protein transporter AT1G09270 transcript variant AT1G09270.2 mRNA, complete cds Length = 2404 Score = 71.9 bits (36), Expect = 3e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 564 tcagtctctccaactttgagaatgttctcaagaccctccaagcaaactgtaacgattctt 623 |||| ||| ||||| ||||||||||| ||||||||||| | ||| ||||| ||||| ||| Sbjct: 1456 tcagcctcaccaaccttgagaatgttttcaagaccctcgaggcacactgtcacgatcctt 1397 Query: 624 ggatctgggcaaaggaggaggtcacacagtggcttgatgcagcc 667 ||||| ||||| | || || ||||| ||||| ||||||||||| Sbjct: 1396 ggatcagggcagattagaagatcacaaagtggtttgatgcagcc 1353
>ref|NM_100797.4| Arabidopsis thaliana protein transporter AT1G09270 transcript variant AT1G09270.1 mRNA, complete cds Length = 2710 Score = 71.9 bits (36), Expect = 3e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 564 tcagtctctccaactttgagaatgttctcaagaccctccaagcaaactgtaacgattctt 623 |||| ||| ||||| ||||||||||| ||||||||||| | ||| ||||| ||||| ||| Sbjct: 1456 tcagcctcaccaaccttgagaatgttttcaagaccctcgaggcacactgtcacgatcctt 1397 Query: 624 ggatctgggcaaaggaggaggtcacacagtggcttgatgcagcc 667 ||||| ||||| | || || ||||| ||||| ||||||||||| Sbjct: 1396 ggatcagggcagattagaagatcacaaagtggtttgatgcagcc 1353
>gb|AY050888.1| Arabidopsis thaliana At1g09270 mRNA sequence Length = 2406 Score = 71.9 bits (36), Expect = 3e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 564 tcagtctctccaactttgagaatgttctcaagaccctccaagcaaactgtaacgattctt 623 |||| ||| ||||| ||||||||||| ||||||||||| | ||| ||||| ||||| ||| Sbjct: 1742 tcagcctcaccaaccttgagaatgttttcaagaccctcgaggcacactgtcacgatcctt 1683 Query: 624 ggatctgggcaaaggaggaggtcacacagtggcttgatgcagcc 667 ||||| ||||| | || || ||||| ||||| ||||||||||| Sbjct: 1682 ggatcagggcagattagaagatcacaaagtggtttgatgcagcc 1639
>emb|Y14616.1|ATIMPA4 Arabidopsis thaliana partial mRNA for importin alpha-like protein 4 Length = 1778 Score = 71.9 bits (36), Expect = 3e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 564 tcagtctctccaactttgagaatgttctcaagaccctccaagcaaactgtaacgattctt 623 |||| ||| ||||| ||||||||||| ||||||||||| | ||| ||||| ||||| ||| Sbjct: 1328 tcagcctcaccaaccttgagaatgttttcaagaccctcgaggcacactgtcacgatcctt 1269 Query: 624 ggatctgggcaaaggaggaggtcacacagtggcttgatgcagcc 667 ||||| ||||| | || || ||||| ||||| ||||||||||| Sbjct: 1268 ggatcagggcagattagaagatcacaaagtggtttgatgcagcc 1225
>gb|AY117313.1| Arabidopsis thaliana putative importin alpha protein (At1g09270) mRNA, complete cds Length = 1648 Score = 71.9 bits (36), Expect = 3e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 564 tcagtctctccaactttgagaatgttctcaagaccctccaagcaaactgtaacgattctt 623 |||| ||| ||||| ||||||||||| ||||||||||| | ||| ||||| ||||| ||| Sbjct: 1358 tcagcctcaccaaccttgagaatgttttcaagaccctcgaggcacactgtcacgatcctt 1299 Query: 624 ggatctgggcaaaggaggaggtcacacagtggcttgatgcagcc 667 ||||| ||||| | || || ||||| ||||| ||||||||||| Sbjct: 1298 ggatcagggcagattagaagatcacaaagtggtttgatgcagcc 1255
>gb|AY090944.1| Arabidopsis thaliana putative importin alpha protein (At1g09270) mRNA, complete cds Length = 2001 Score = 71.9 bits (36), Expect = 3e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 564 tcagtctctccaactttgagaatgttctcaagaccctccaagcaaactgtaacgattctt 623 |||| ||| ||||| ||||||||||| ||||||||||| | ||| ||||| ||||| ||| Sbjct: 1456 tcagcctcaccaaccttgagaatgttttcaagaccctcgaggcacactgtcacgatcctt 1397 Query: 624 ggatctgggcaaaggaggaggtcacacagtggcttgatgcagcc 667 ||||| ||||| | || || ||||| ||||| ||||||||||| Sbjct: 1396 ggatcagggcagattagaagatcacaaagtggtttgatgcagcc 1353
>emb|BX815301.1|CNS0AALB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS50ZB07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1954 Score = 71.9 bits (36), Expect = 3e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 564 tcagtctctccaactttgagaatgttctcaagaccctccaagcaaactgtaacgattctt 623 |||| ||| ||||| ||||||||||| ||||||||||| | ||| ||||| ||||| ||| Sbjct: 1416 tcagcctcaccaaccttgagaatgttttcaagaccctcgaggcacactgtcacgatcctt 1357 Query: 624 ggatctgggcaaaggaggaggtcacacagtggcttgatgcagcc 667 ||||| ||||| | || || ||||| ||||| ||||||||||| Sbjct: 1356 ggatcagggcagattagaagatcacaaagtggtttgatgcagcc 1313
>gb|AC003114.1|T12M4 Arabidopsis thaliana chromosome 1 BAC T12M4 sequence, complete sequence Length = 59261 Score = 71.9 bits (36), Expect = 3e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 564 tcagtctctccaactttgagaatgttctcaagaccctccaagcaaactgtaacgattctt 623 |||| ||| ||||| ||||||||||| ||||||||||| | ||| ||||| ||||| ||| Sbjct: 4675 tcagcctcaccaaccttgagaatgttttcaagaccctcgaggcacactgtcacgatcctt 4734 Query: 624 ggatctgggcaaaggaggaggtcacacagtggcttgatgcagcc 667 ||||| ||||| | || || ||||| ||||| ||||||||||| Sbjct: 4735 ggatcagggcagattagaagatcacaaagtggtttgatgcagcc 4778
>gb|AC151805.20| Medicago truncatula clone mth2-59n17, complete sequence Length = 143937 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 428 ctcaagaatcttcacagccttctcatagatttcattgttatcatggctctgcaggttctc 487 ||||||||| || |||||||||||||| ||||||| ||| ||||| |||||| ||| || Sbjct: 24321 ctcaagaattttaacagccttctcataaatttcatagttgtcatgattctgcatgttatc 24380 Query: 488 aatcttttcca 498 ||||||||||| Sbjct: 24381 aatcttttcca 24391 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Plus Query: 570 tctccaactttgagaatgttctcaagaccctccaagcaaactgtaacgattcttggatct 629 |||||||| || ||||| ||||||||||| || | || || ||||| ||||||||||| Sbjct: 24463 tctccaaccttcagaatattctcaagaccttctagacagacagtaacaattcttggatca 24522 Query: 630 gggcaaa 636 ||||||| Sbjct: 24523 gggcaaa 24529
>gb|AC170084.13| Medicago truncatula clone mth2-156k10, complete sequence Length = 143943 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 428 ctcaagaatcttcacagccttctcatagatttcattgttatcatggctctgcaggttctc 487 ||||||||| || |||||||||||||| ||||||| ||| ||||| |||||| ||| || Sbjct: 119623 ctcaagaattttaacagccttctcataaatttcatagttgtcatgattctgcatgttatc 119564 Query: 488 aatcttttcca 498 ||||||||||| Sbjct: 119563 aatcttttcca 119553 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Minus Query: 570 tctccaactttgagaatgttctcaagaccctccaagcaaactgtaacgattcttggatct 629 |||||||| || ||||| ||||||||||| || | || || ||||| ||||||||||| Sbjct: 119481 tctccaaccttcagaatattctcaagaccttctagacagacagtaacaattcttggatca 119422 Query: 630 gggcaaa 636 ||||||| Sbjct: 119421 gggcaaa 119415
>gb|AC151459.30| Medicago truncatula clone mth2-6e6, complete sequence Length = 129518 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 428 ctcaagaatcttcacagccttctcatagatttcattgttatcatggctctgcaggttctc 487 ||||||||| || |||||||||||||| ||||||| ||| ||||| |||||| ||| || Sbjct: 18101 ctcaagaattttaacagccttctcataaatttcatagttgtcatgattctgcatgttatc 18042 Query: 488 aatcttttcca 498 ||||||||||| Sbjct: 18041 aatcttttcca 18031 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Minus Query: 570 tctccaactttgagaatgttctcaagaccctccaagcaaactgtaacgattcttggatct 629 |||||||| || ||||| ||||||||||| || | || || ||||| ||||||||||| Sbjct: 17959 tctccaaccttcagaatattctcaagaccttctagacagacagtaacaattcttggatca 17900 Query: 630 gggcaaa 636 ||||||| Sbjct: 17899 gggcaaa 17893
>gb|AF369706.1| Capsicum annuum importin alpha 1 mRNA, complete cds Length = 1860 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 600 tccaagcaaactgtaacgattcttggatctgggcaaaggaggaggtcacacagtggcttg 659 |||||||| || ||||||||||| |||||||| |||| ||||| ||||| |||||||| Sbjct: 1359 tccaagcataccgtaacgattctgggatctggacaaattaggagatcacatagtggctta 1300 Query: 660 atgca 664 ||||| Sbjct: 1299 atgca 1295
>gb|BT013674.1| Lycopersicon esculentum clone 132494R, mRNA sequence Length = 2002 Score = 56.0 bits (28), Expect = 2e-04 Identities = 94/116 (81%) Strand = Plus / Minus Query: 414 tccatccagtaagcctcaagaatcttcacagccttctcatagatttcattgttatcatgg 473 |||| |||||| | |||||||||||| || ||||| |||||||| || | || |||||| Sbjct: 1553 tccaaccagtacgtctcaagaatcttaactgccttttcatagatctcttgattgtcatgg 1494 Query: 474 ctctgcaggttctcaatcttttccaggccttctgcttcatcaatcatctgtgcata 529 || || || |||||||| ||||| | ||||| || |||||||||| ||| ||||| Sbjct: 1493 ctttgaagattctcaattttttctaaaccttcagcgtcatcaatcagctgagcata 1438
>ref|NM_116447.1| Arabidopsis thaliana ATIMPALPHA3/MOS6; protein transporter AT4G02150 (ATIMPALPHA3/MOS6) mRNA, complete cds Length = 1918 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 435 atcttcacagccttctcatagatttcattgttatcatggctctgcaggttctcaatcttt 494 |||||||| || || || ||||| |||||||| || || ||||| || ||||||||||| Sbjct: 1562 atcttcacggctttgtcgtagatatcattgttgtcgtgactctgaagattctcaatcttc 1503 Query: 495 tccaggccttctgcttcatcaatcat 520 || | ||||||||||| |||||||| Sbjct: 1502 tctaacccttctgcttcgtcaatcat 1477
>emb|Y15225.1|ATIMPA3 Arabidopsis thaliana mRNA for importin alpha-like protein Impa3 Length = 1887 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 435 atcttcacagccttctcatagatttcattgttatcatggctctgcaggttctcaatcttt 494 |||||||| || || || ||||| |||||||| || || ||||| || ||||||||||| Sbjct: 1503 atcttcacggctttgtcgtagatatcattgttgtcgtgactctgaagattctcaatcttc 1444 Query: 495 tccaggccttctgcttcatcaatcat 520 || | ||||||||||| |||||||| Sbjct: 1443 tctaacccttctgcttcgtcaatcat 1418
>emb|Y09511.1|ATKAPAPRO A.thaliana mRNA for Kap alpha protein Length = 1978 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 435 atcttcacagccttctcatagatttcattgttatcatggctctgcaggttctcaatcttt 494 |||||||| || || || ||||| |||||||| || || ||||| || ||||||||||| Sbjct: 1554 atcttcacggctttgtcgtagatatcattgttgtcgtgactctgaagattctcaatcttc 1495 Query: 495 tccaggccttctgcttcatcaatcat 520 || | ||||||||||| |||||||| Sbjct: 1494 tctaacccttctgcttcgtcaatcat 1469
>emb|AL161493.2|ATCHRIV5 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 5 Length = 198220 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 435 atcttcacagccttctcatagatttcattgttatcatggctctgcaggttctcaatcttt 494 |||||||| || || || ||||| |||||||| || || ||||| || ||||||||||| Sbjct: 179874 atcttcacggctttgtcgtagatatcattgttgtcgtgactctgaagattctcaatcttc 179933 Query: 495 tccaggccttctgcttcatcaatcat 520 || | ||||||||||| |||||||| Sbjct: 179934 tctaacccttctgcttcgtcaatcat 179959
>gb|AY081725.1| Arabidopsis thaliana AT4g02150/T10M13_16 mRNA, complete cds Length = 1596 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 435 atcttcacagccttctcatagatttcattgttatcatggctctgcaggttctcaatcttt 494 |||||||| || || || ||||| |||||||| || || ||||| || ||||||||||| Sbjct: 1475 atcttcacggctttgtcgtagatatcattgttgtcgtgactctgaagattctcaatcttc 1416 Query: 495 tccaggccttctgcttcatcaatcat 520 || | ||||||||||| |||||||| Sbjct: 1415 tctaacccttctgcttcgtcaatcat 1390
>gb|DQ087970.1| Arabidopsis thaliana putative importin alpha subunit (MOS6) mRNA, complete cds Length = 1596 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 435 atcttcacagccttctcatagatttcattgttatcatggctctgcaggttctcaatcttt 494 |||||||| || || || ||||| |||||||| || || ||||| || ||||||||||| Sbjct: 1475 atcttcacggctttgtcgtagatatcattgttgtcgtgactctgaagattctcaatcttc 1416 Query: 495 tccaggccttctgcttcatcaatcat 520 || | ||||||||||| |||||||| Sbjct: 1415 tctaacccttctgcttcgtcaatcat 1390
>gb|AF385693.1|AF385693 Arabidopsis thaliana AT4g02150/T10M13_16 mRNA, complete cds Length = 1918 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 435 atcttcacagccttctcatagatttcattgttatcatggctctgcaggttctcaatcttt 494 |||||||| || || || ||||| |||||||| || || ||||| || ||||||||||| Sbjct: 1562 atcttcacggctttgtcgtagatatcattgttgtcgtgactctgaagattctcaatcttc 1503 Query: 495 tccaggccttctgcttcatcaatcat 520 || | ||||||||||| |||||||| Sbjct: 1502 tctaacccttctgcttcgtcaatcat 1477
>gb|AF001308.1|ATAF001308 Arabidopsis thaliana BAC T10M13 from chromosome IV, from 10.8 cM to 11.6 cM, complete sequence Length = 105654 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 435 atcttcacagccttctcatagatttcattgttatcatggctctgcaggttctcaatcttt 494 |||||||| || || || ||||| |||||||| || || ||||| || ||||||||||| Sbjct: 77270 atcttcacggctttgtcgtagatatcattgttgtcgtgactctgaagattctcaatcttc 77329 Query: 495 tccaggccttctgcttcatcaatcat 520 || | ||||||||||| |||||||| Sbjct: 77330 tctaacccttctgcttcgtcaatcat 77355
>ref|NM_100149.3| Arabidopsis thaliana protein transporter AT1G02690 transcript variant AT1G02690.1 mRNA, complete cds Length = 1937 Score = 50.1 bits (25), Expect = 0.010 Identities = 64/77 (83%) Strand = Plus / Minus Query: 447 ttctcatagatttcattgttatcatggctctgcaggttctcaatcttttccaggccttct 506 |||||||| || ||||| ||||| || ||||| || ||||||||||| |||| || ||| Sbjct: 1603 ttctcataaatctcattattatcgtgactctgaagattctcaatcttgtccaaaccatct 1544 Query: 507 gcttcatcaatcatctg 523 || || ||||||||||| Sbjct: 1543 gcgtcttcaatcatctg 1527
>ref|NM_202014.1| Arabidopsis thaliana protein transporter AT1G02690 transcript variant AT1G02690.2 mRNA, complete cds Length = 1940 Score = 50.1 bits (25), Expect = 0.010 Identities = 64/77 (83%) Strand = Plus / Minus Query: 447 ttctcatagatttcattgttatcatggctctgcaggttctcaatcttttccaggccttct 506 |||||||| || ||||| ||||| || ||||| || ||||||||||| |||| || ||| Sbjct: 1606 ttctcataaatctcattattatcgtgactctgaagattctcaatcttgtccaaaccatct 1547 Query: 507 gcttcatcaatcatctg 523 || || ||||||||||| Sbjct: 1546 gcgtcttcaatcatctg 1530
>gb|AY096437.1| Arabidopsis thaliana putative importin alpha protein (At1g02690) mRNA, complete cds Length = 1648 Score = 50.1 bits (25), Expect = 0.010 Identities = 64/77 (83%) Strand = Plus / Minus Query: 447 ttctcatagatttcattgttatcatggctctgcaggttctcaatcttttccaggccttct 506 |||||||| || ||||| ||||| || ||||| || ||||||||||| |||| || ||| Sbjct: 1466 ttctcataaatctcattattatcgtgactctgaagattctcaatcttgtccaaaccatct 1407 Query: 507 gcttcatcaatcatctg 523 || || ||||||||||| Sbjct: 1406 gcgtcttcaatcatctg 1390
>gb|AY070068.1| Arabidopsis thaliana putative importin alpha protein (At1g02690) mRNA, complete cds Length = 1953 Score = 50.1 bits (25), Expect = 0.010 Identities = 64/77 (83%) Strand = Plus / Minus Query: 447 ttctcatagatttcattgttatcatggctctgcaggttctcaatcttttccaggccttct 506 |||||||| || ||||| ||||| || ||||| || ||||||||||| |||| || ||| Sbjct: 1603 ttctcataaatctcattattatcgtgactctgaagattctcaatcttgtccaaaccatct 1544 Query: 507 gcttcatcaatcatctg 523 || || ||||||||||| Sbjct: 1543 gcgtcttcaatcatctg 1527
>emb|BX814638.1|CNS0ABXV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB85ZG10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1832 Score = 50.1 bits (25), Expect = 0.010 Identities = 64/77 (83%) Strand = Plus / Minus Query: 447 ttctcatagatttcattgttatcatggctctgcaggttctcaatcttttccaggccttct 506 |||||||| || ||||| ||||| || ||||| || ||||||||||| |||| || ||| Sbjct: 1569 ttctcataaatctcattattatcgtgactctgaagattctcaatcttgtccaaaccatct 1510 Query: 507 gcttcatcaatcatctg 523 || || ||||||||||| Sbjct: 1509 gcgtcttcaatcatctg 1493
>gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BAC T14P4 genomic sequence, complete sequence Length = 121668 Score = 50.1 bits (25), Expect = 0.010 Identities = 64/77 (83%) Strand = Plus / Plus Query: 447 ttctcatagatttcattgttatcatggctctgcaggttctcaatcttttccaggccttct 506 |||||||| || ||||| ||||| || ||||| || ||||||||||| |||| || ||| Sbjct: 30953 ttctcataaatctcattattatcgtgactctgaagattctcaatcttgtccaaaccatct 31012 Query: 507 gcttcatcaatcatctg 523 || || ||||||||||| Sbjct: 31013 gcgtcttcaatcatctg 31029
>gb|AC122160.21| Medicago truncatula clone mth2-23d6, complete sequence Length = 125105 Score = 48.1 bits (24), Expect = 0.038 Identities = 81/100 (81%) Strand = Plus / Minus Query: 570 tctccaactttgagaatgttctcaagaccctccaagcaaactgtaacgattcttggatct 629 |||||||| || |||| ||||||||||| || | ||||| ||||| ||||||||||| Sbjct: 62608 tctccaacctttagaaaattctcaagaccttctagacaaacagtaactattcttggatca 62549 Query: 630 gggcaaaggaggaggtcacacagtggcttgatgcagccct 669 ||||||| || | |||||||| ||||| ||||| |||| Sbjct: 62548 gggcaaactagcaaatcacacagaggcttaatgcaaccct 62509
>gb|AC159537.24| Medicago truncatula clone mth2-188k3, complete sequence Length = 119507 Score = 48.1 bits (24), Expect = 0.038 Identities = 81/100 (81%) Strand = Plus / Minus Query: 570 tctccaactttgagaatgttctcaagaccctccaagcaaactgtaacgattcttggatct 629 |||||||| || |||| ||||||||||| || | ||||| ||||| ||||||||||| Sbjct: 44866 tctccaacctttagaaaattctcaagaccttctagacaaacagtaactattcttggatca 44807 Query: 630 gggcaaaggaggaggtcacacagtggcttgatgcagccct 669 ||||||| || | |||||||| ||||| ||||| |||| Sbjct: 44806 gggcaaactagcaaatcacacagaggcttaatgcaaccct 44767
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Plus Query: 560 cttatcagtctctccaactttgagaatgttctcaagacc 598 ||||||| ||||||||| ||||| |||||||||||||| Sbjct: 1311134 cttatcaacctctccaaccttgaggatgttctcaagacc 1311172
>ref|XM_570493.1| Cryptococcus neoformans var. neoformans JEC21 Importin alpha subunit (CND04770) partial mRNA Length = 2417 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 560 cttatcagtctctccaactttgagaatgttctcaagacc 598 ||||||| ||||||||| ||||| |||||||||||||| Sbjct: 1429 cttatcaacctctccaaccttgaggatgttctcaagacc 1391
>ref|XM_779791.1| PREDICTED: Strongylocentrotus purpuratus similar to karyopherin (importin) alpha 6 (predicted) (LOC579689), mRNA Length = 1502 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 639 aggaggtcacacagtggcttgatgcagccct 669 ||||||||||||| |||||||||||| |||| Sbjct: 977 aggaggtcacacaatggcttgatgcaaccct 947
>ref|XM_387317.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07141.1) partial mRNA Length = 1659 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 642 aggtcacacagtggcttgatgcagcc 667 ||||||||||| |||||||||||||| Sbjct: 1289 aggtcacacaggggcttgatgcagcc 1264
>emb|AL590484.10| Human DNA sequence from clone RP11-76E18 on chromosome 6 Contains the 5' end of a gene for a novel protein, complete sequence Length = 65240 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 403 catcttcctcctccatccagta 424 |||||||||||||||||||||| Sbjct: 50454 catcttcctcctccatccagta 50475
>dbj|AB168981.1| Macaca fascicularis testis cDNA, clone: QtsA-16355, similar to human hypothetical gene MGC16309 (MGC16309), mRNA, RefSeq: NM_033413.2 Length = 1451 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 426 gcctcaagaatcttcacagcct 447 |||||||||||||||||||||| Sbjct: 498 gcctcaagaatcttcacagcct 519
>gb|AF540437.1| Meleagris gallopavo microsatellite MNT-145 mRNA sequence Length = 740 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 gagttgcagaagctcaactcag 49 |||||||||||||||||||||| Sbjct: 169 gagttgcagaagctcaactcag 190
>gb|BC064184.1| Xenopus tropicalis ubiquitin-conjugating enzyme E2N, mRNA (cDNA clone MGC:75672 IMAGE:5379998), complete cds Length = 1499 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 cattggtcaaatctgtattca 319 ||||||||||||||||||||| Sbjct: 937 cattggtcaaatctgtattca 957
>gb|AC155946.7| Mus musculus 6 BAC RP24-483K3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 178502 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 502 cttctgcttcatcaatcatct 522 ||||||||||||||||||||| Sbjct: 68792 cttctgcttcatcaatcatct 68812
>ref|XM_981743.1| PREDICTED: Mus musculus RIKEN cDNA 4933426K21 gene, transcript variant 1 (4933426K21Rik), mRNA Length = 3001 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 cttctgcttcatcaatcatct 522 ||||||||||||||||||||| Sbjct: 351 cttctgcttcatcaatcatct 331
>ref|XM_981777.1| PREDICTED: Mus musculus RIKEN cDNA 4933426K21 gene, transcript variant 2 (4933426K21Rik), mRNA Length = 3039 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 cttctgcttcatcaatcatct 522 ||||||||||||||||||||| Sbjct: 386 cttctgcttcatcaatcatct 366
>ref|XM_981812.1| PREDICTED: Mus musculus RIKEN cDNA 4933426K21 gene, transcript variant 3 (4933426K21Rik), mRNA Length = 3276 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 cttctgcttcatcaatcatct 522 ||||||||||||||||||||| Sbjct: 626 cttctgcttcatcaatcatct 606
>ref|XM_132812.6| PREDICTED: Mus musculus RIKEN cDNA 4933426K21 gene, transcript variant 1 (4933426K21Rik), mRNA Length = 4175 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 cttctgcttcatcaatcatct 522 ||||||||||||||||||||| Sbjct: 1525 cttctgcttcatcaatcatct 1505
>ref|XM_001002951.1| PREDICTED: Mus musculus RIKEN cDNA 4933426K21 gene (4933426K21Rik), mRNA Length = 3317 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 cttctgcttcatcaatcatct 522 ||||||||||||||||||||| Sbjct: 667 cttctgcttcatcaatcatct 647
>gb|AC112150.4| Mus musculus BAC clone RP24-84I17 from chromosome 16, complete sequence Length = 211640 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 197 tcttgaaatcttcagcttatt 217 ||||||||||||||||||||| Sbjct: 30524 tcttgaaatcttcagcttatt 30544
>gb|AC129192.4| Mus musculus BAC clone RP24-113B19 from chromosome 5, complete sequence Length = 170410 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 ccttctcatagatttcattgt 465 ||||||||||||||||||||| Sbjct: 21660 ccttctcatagatttcattgt 21680
>gb|AC137971.4| Mus musculus, clone RP23-135B1, complete sequence Length = 224801 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 ccttctcatagatttcattgt 465 ||||||||||||||||||||| Sbjct: 51911 ccttctcatagatttcattgt 51931
>ref|NM_204044.1| Xenopus tropicalis ubiquitin-conjugating enzyme E2N (ube2n), mRNA Length = 1499 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 cattggtcaaatctgtattca 319 ||||||||||||||||||||| Sbjct: 937 cattggtcaaatctgtattca 957
>emb|AL766852.1|SAG766852 Streptococcus agalactiae NEM316 complete genome, segment 10 Length = 174050 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 ggcaacacctgtgggagcttc 382 ||||||||||||||||||||| Sbjct: 68458 ggcaacacctgtgggagcttc 68438
>dbj|AK016936.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933426K21 product:RIKEN cDNA 4933426K21 gene, full insert sequence Length = 1368 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 cttctgcttcatcaatcatct 522 ||||||||||||||||||||| Sbjct: 439 cttctgcttcatcaatcatct 419
>dbj|AK039398.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330038M05 product:hypothetical S6 modification enzyme RimK family protein containing protein, full insert sequence Length = 3041 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 cttctgcttcatcaatcatct 522 ||||||||||||||||||||| Sbjct: 387 cttctgcttcatcaatcatct 367
>dbj|AK173135.1| Mus musculus mRNA for mKIAA1238 protein Length = 4024 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 cttctgcttcatcaatcatct 522 ||||||||||||||||||||| Sbjct: 723 cttctgcttcatcaatcatct 703
>gb|AC018682.4| Homo sapiens BAC clone RP11-417F21 from 2, complete sequence Length = 181405 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 527 atagacatttccctccccaga 547 ||||||||||||||||||||| Sbjct: 49179 atagacatttccctccccaga 49159
>emb|CR762229.2| Xenopus tropicalis finished cDNA, clone TGas130l02 Length = 1470 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 cattggtcaaatctgtattca 319 ||||||||||||||||||||| Sbjct: 940 cattggtcaaatctgtattca 960
>emb|CT010517.11| Mouse DNA sequence from clone RP23-357P12 on chromosome 16, complete sequence Length = 188228 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 tcttgaaatcttcagcttatt 217 ||||||||||||||||||||| Sbjct: 127711 tcttgaaatcttcagcttatt 127691
>gb|BC052078.1| Mus musculus RIKEN cDNA 4933426K21 gene, transcript variant 1, mRNA (cDNA clone MGC:62496 IMAGE:6402765), complete cds Length = 2027 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 cttctgcttcatcaatcatct 522 ||||||||||||||||||||| Sbjct: 685 cttctgcttcatcaatcatct 665
>ref|NM_120276.3| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT5G01980 mRNA, complete cds Length = 1838 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 tcttgaaatcttcagcttat 216 |||||||||||||||||||| Sbjct: 282 tcttgaaatcttcagcttat 301
>ref|NM_111446.1| Arabidopsis thaliana protein transporter AT3G05720 mRNA, complete cds Length = 1587 Score = 40.1 bits (20), Expect = 9.2 Identities = 56/68 (82%) Strand = Plus / Minus Query: 405 tcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttcattg 464 ||||| || ||||||||||| | |||||||||||||| || | || ||||| |||||| Sbjct: 1481 tcttcttcttccatccagtatgtttcaagaatcttcaccgcagtttcgtagatgtcattg 1422 Query: 465 ttatcatg 472 || ||||| Sbjct: 1421 ttctcatg 1414
>gb|AC139128.6| Mus musculus chromosome 3, clone RP23-100B7, complete sequence Length = 239600 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 gaaattgtcacctaaatgcc 22 |||||||||||||||||||| Sbjct: 156713 gaaattgtcacctaaatgcc 156732
>gb|AC104540.9| Mus musculus chromosome 5, clone RP23-301P15, complete sequence Length = 221681 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 204 atcttcagcttattggacccaccacaac 231 ||||||||||| ||||||||| |||||| Sbjct: 167392 atcttcagctttttggacccagcacaac 167365
>gb|AY616184.1| Branchiostoma belcheri tsingtaunese Gaba(A) receptor associated protein mRNA, complete cds Length = 1246 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 tccatccagtaagcctcaag 433 |||||||||||||||||||| Sbjct: 1018 tccatccagtaagcctcaag 1037
>gb|AY601653.1| Branchiostoma belcheri tsingtaunese gabarap protein mRNA, complete cds Length = 1246 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 tccatccagtaagcctcaag 433 |||||||||||||||||||| Sbjct: 1018 tccatccagtaagcctcaag 1037
>gb|AC127348.4| Mus musculus BAC clone RP23-57D10 from chromosome 7, complete sequence Length = 229190 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 ccagtaagcctcaagaatct 438 |||||||||||||||||||| Sbjct: 191837 ccagtaagcctcaagaatct 191818
>ref|XM_654654.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2142.2), mRNA Length = 1662 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 568 tctctccaactttgagaatgttctcaag 595 |||| ||||| ||||||||||||||||| Sbjct: 1366 tctcaccaaccttgagaatgttctcaag 1339
>gb|AC112675.12| Mus musculus chromosome 1, clone RP23-138J12, complete sequence Length = 278715 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 cgcatcatcttcctcctcca 417 |||||||||||||||||||| Sbjct: 56089 cgcatcatcttcctcctcca 56108
>ref|XM_798375.1| Trypanosoma brucei TREU927 hypothetical protein (Tb09.160.0670) partial mRNA Length = 8934 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gagacaagggaattgccacc 299 |||||||||||||||||||| Sbjct: 1669 gagacaagggaattgccacc 1688
>gb|AC011620.8|ATAC011620 Arabidopsis thaliana chromosome III BAC F18C1 genomic sequence, complete sequence Length = 100887 Score = 40.1 bits (20), Expect = 9.2 Identities = 56/68 (82%) Strand = Plus / Minus Query: 405 tcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttcattg 464 ||||| || ||||||||||| | |||||||||||||| || | || ||||| |||||| Sbjct: 19035 tcttcttcttccatccagtatgtttcaagaatcttcaccgcagtttcgtagatgtcattg 18976 Query: 465 ttatcatg 472 || ||||| Sbjct: 18975 ttctcatg 18968
>gb|AC116329.3| Mus musculus BAC clone RP24-290C19 from 5, complete sequence Length = 170072 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 474 ctctgcaggttctcaatcttttcc 497 ||||||||||||| |||||||||| Sbjct: 109117 ctctgcaggttctgaatcttttcc 109094
>gb|AF465210.1| Emericella nidulans karyopherin alpha (kapA) gene, complete cds Length = 1942 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 568 tctctccaactttgagaatgttctcaag 595 |||| ||||| ||||||||||||||||| Sbjct: 1646 tctcaccaaccttgagaatgttctcaag 1619
>gb|DQ446636.1| Arabidopsis thaliana clone pENTR221-At3g05720 importin alpha-1 subunit (At3g05720) mRNA, complete cds Length = 1587 Score = 40.1 bits (20), Expect = 9.2 Identities = 56/68 (82%) Strand = Plus / Minus Query: 405 tcttcctcctccatccagtaagcctcaagaatcttcacagccttctcatagatttcattg 464 ||||| || ||||||||||| | |||||||||||||| || | || ||||| |||||| Sbjct: 1481 tcttcttcttccatccagtatgtttcaagaatcttcaccgcagtttcgtagatgtcattg 1422 Query: 465 ttatcatg 472 || ||||| Sbjct: 1421 ttctcatg 1414
>emb|Z84468.1|HS299D3 Human DNA sequence from clone CTA-299D3 on chromosome 22q13.3, complete sequence Length = 90736 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ctgtgcatagacatttccct 540 |||||||||||||||||||| Sbjct: 85909 ctgtgcatagacatttccct 85928
>emb|AL590613.6| Human DNA sequence from clone RP11-164G6 on chromosome 6 Contains part of the LAMA2 gene for laminin, alpha 2 (merosin, congenital muscular dystrophy) (LAMM), complete sequence Length = 91827 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 tcttcctcctccatccagta 424 |||||||||||||||||||| Sbjct: 37409 tcttcctcctccatccagta 37428
>gb|AC103739.4| Homo sapiens chromosome 15, clone CTD-3065B20, complete sequence Length = 161386 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tttcttgaaatcttcagctt 214 |||||||||||||||||||| Sbjct: 54080 tttcttgaaatcttcagctt 54061
>emb|AL162508.1|ATT7H20 Arabidopsis thaliana DNA chromosome 5, BAC clone T7H20 (ESSA project) Length = 87581 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 tcttgaaatcttcagcttat 216 |||||||||||||||||||| Sbjct: 6665 tcttgaaatcttcagcttat 6684
>gb|AC110615.3| Homo sapiens BAC clone RP11-556N4 from 4, complete sequence Length = 195101 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 ctgcaggttctcaatctttt 495 |||||||||||||||||||| Sbjct: 110114 ctgcaggttctcaatctttt 110133
>gb|AC105421.2| Homo sapiens BAC clone RP11-695A18 from 4, complete sequence Length = 162793 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ttgctttcttgaaatcttca 210 |||||||||||||||||||| Sbjct: 143777 ttgctttcttgaaatcttca 143796
>gb|AC026807.4| Homo sapiens chromosome 5 clone RPCI-1_58P9, complete sequence Length = 101716 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ttgctttcttgaaatcttca 210 |||||||||||||||||||| Sbjct: 46884 ttgctttcttgaaatcttca 46903
>gb|AC132949.4| Mus musculus BAC clone RP24-547H18 from chromosome 7, complete sequence Length = 206116 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 ccagtaagcctcaagaatct 438 |||||||||||||||||||| Sbjct: 16420 ccagtaagcctcaagaatct 16401
>gb|AC137146.9| Mus musculus chromosome 1, clone RP24-358I14, complete sequence Length = 189466 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 cgcatcatcttcctcctcca 417 |||||||||||||||||||| Sbjct: 147303 cgcatcatcttcctcctcca 147322
>emb|BX832364.1|CNS09ZQL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH68ZB07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1787 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 tcttgaaatcttcagcttat 216 |||||||||||||||||||| Sbjct: 283 tcttgaaatcttcagcttat 302
>emb|BX832272.1|CNS09ZOT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH62ZD05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1775 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 tcttgaaatcttcagcttat 216 |||||||||||||||||||| Sbjct: 277 tcttgaaatcttcagcttat 296
>gb|BT021990.1| Arabidopsis thaliana At5g01980 gene, complete cds Length = 1733 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 tcttgaaatcttcagcttat 216 |||||||||||||||||||| Sbjct: 255 tcttgaaatcttcagcttat 274
>gb|AC158171.2| Pan troglodytes BAC clone CH251-434I6 from chromosome unknown, complete sequence Length = 184468 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ttgctttcttgaaatcttca 210 |||||||||||||||||||| Sbjct: 123176 ttgctttcttgaaatcttca 123195
>gb|AC018878.8| Homo sapiens BAC clone RP11-297N12 from 2, complete sequence Length = 170801 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 630 gggcaaaggaggaggtcaca 649 |||||||||||||||||||| Sbjct: 14074 gggcaaaggaggaggtcaca 14055
>gb|AC022968.9| Homo sapiens chromosome 18, clone RP11-421N8, complete sequence Length = 187277 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 atctgtattcagcccaagtt 328 |||||||||||||||||||| Sbjct: 78613 atctgtattcagcccaagtt 78632
>gb|AC018762.5|AC018762 Homo sapiens chromosome 5 clone CTD-2154N17, complete sequence Length = 78474 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ttgctttcttgaaatcttca 210 |||||||||||||||||||| Sbjct: 58912 ttgctttcttgaaatcttca 58931
>gb|AC163408.4| Mus musculus chromosome 5, clone RP24-300F2, complete sequence Length = 171463 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 atcttcagcttattggacccaccacaac 231 ||||||||||| ||||||||| |||||| Sbjct: 107683 atcttcagctttttggacccagcacaac 107710
>emb|AL845274.17| Mouse DNA sequence from clone RP23-146F24 on chromosome 2, complete sequence Length = 230151 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 tcttcctcctccatccagta 424 |||||||||||||||||||| Sbjct: 74796 tcttcctcctccatccagta 74815 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,560,192 Number of Sequences: 3902068 Number of extensions: 6560192 Number of successful extensions: 134861 Number of sequences better than 10.0: 140 Number of HSP's better than 10.0 without gapping: 138 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 134501 Number of HSP's gapped (non-prelim): 346 length of query: 676 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 653 effective length of database: 17,143,297,704 effective search space: 11194573400712 effective search space used: 11194573400712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)