Clone Information

BLAST Search Result

Clone Name	rbags9a20
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL5A_ORYSA (P49625) 60S ribosomal protein L5-1	209	3e-54
2	RL5B_ORYSA (Q8L4L4) 60S ribosomal protein L5-2	208	6e-54
3	RL5_CUCSA (Q6UNT2) 60S ribosomal protein L5	180	2e-45
4	RL5_ARATH (P49227) 60S ribosomal protein L5	170	1e-42
5	RL5_SOLME (P93779) 60S ribosomal protein L5 (Fragment)	162	4e-40
6	RL5_BOMMO (O76190) 60S ribosomal protein L5	108	7e-24
7	RL5_HELAN (O65353) 60S ribosomal protein L5	106	3e-23
8	RL5_STYCL (Q26481) 60S ribosomal protein L5	105	6e-23
9	RL5_NEUCR (O59953) 60S ribosomal protein L5 (CPR4)	102	4e-22
10	RL5_CAEEL (P49405) 60S ribosomal protein L5	101	1e-21
11	RL5_DUNSA (O22608) 60S ribosomal protein L5	100	3e-21
12	RL5B_SCHPO (O74306) 60S ribosomal protein L5-B	99	5e-21
13	RL5A_SCHPO (P52822) 60S ribosomal protein L5-A	97	2e-20
14	RL5B_XENLA (P15126) 60S ribosomal protein L5-B	97	2e-20
15	RL5A_XENLA (P15125) 60S ribosomal protein L5-A	96	4e-20
16	RL5_MACFA (Q4R5M0) 60S ribosomal protein L5	96	5e-20
17	RL5_HUMAN (P46777) 60S ribosomal protein L5	96	5e-20
18	RL5_RAT (P09895) 60S ribosomal protein L5	96	6e-20
19	RL5_MOUSE (P47962) 60S ribosomal protein L5	96	6e-20
20	RL5_CHICK (P22451) 60S ribosomal protein L5	95	8e-20
21	RL5_YEAST (P26321) 60S ribosomal protein L5 (L1) (YL3) (Ribosoma...	88	1e-17
22	RL5_ANOGA (O44248) 60S ribosomal protein L5	87	2e-17
23	RL18_METKA (Q8TZA5) 50S ribosomal protein L18P	43	4e-04
24	RL18_PYRAE (Q8ZVV7) 50S ribosomal protein L18P	42	0.001
25	RL18_PYRAB (Q9V1V4) 50S ribosomal protein L18P	40	0.004
26	RL18_SULTO (Q975J9) 50S ribosomal protein L18P	39	0.009
27	RL18_PYRHO (O59438) 50S ribosomal protein L18P	38	0.011
28	RL18_PYRFU (Q9HH80) 50S ribosomal protein L18P (PfL18)	38	0.011
29	RL18_METJA (P54044) 50S ribosomal protein L18P	38	0.015
30	RL18_PYRKO (Q5JJG7) 50S ribosomal protein L18P	38	0.015
31	RL18_METVA (P14033) 50S ribosomal protein L18P	34	0.22
32	ZN674_HUMAN (Q2M3X9) Zinc finger protein 674	33	0.28
33	RL18_METMP (Q6LXD4) 50S ribosomal protein L18P	33	0.28
34	RL18_METTH (O26130) 50S ribosomal protein L18P	32	0.82
35	RL18_SULAC (O05640) 50S ribosomal protein L18P	32	1.1
36	SRYD_DROME (P07664) Serendipity locus protein delta	31	1.8
37	UBF1A_XENLA (P25979) Nucleolar transcription factor 1-A (Upstrea...	30	2.4
38	NCKP1_ARATH (Q5S2C4) Protein NAP1 (Nck-associated protein 1) (At...	30	3.1
39	CTR3_MOUSE (P70423) Cationic amino acid transporter 3 (CAT-3) (S...	30	3.1
40	SCNNB_RAT (P37090) Amiloride-sensitive sodium channel beta-subun...	30	3.1
41	RL5_RABIT (P19949) 60S ribosomal protein L5 (Fragments)	30	4.1
42	VTA1_YEAST (Q06263) Vacuolar protein sorting-associated protein ...	30	4.1
43	ZN622_CHICK (Q90Y35) Zinc finger protein 622 (Zn-finger protein ...	29	5.3
44	CTR3_RAT (O08812) Cationic amino acid transporter 3 (CAT-3) (Sol...	29	5.3
45	PTPR2_MOUSE (P80560) Receptor-type tyrosine-protein phosphatase ...	29	5.3
46	UBF1B_XENLA (P25980) Nucleolar transcription factor 1-B (Upstrea...	29	5.3
47	Y1664_METJA (Q59058) Hypothetical protein MJ1664	29	6.9
48	ODO1_RICCN (Q92J42) 2-oxoglutarate dehydrogenase E1 component (E...	29	6.9
49	OAF1_YEAST (P39720) Oleate-activated transcription factor 1	29	6.9
50	TREF1_HUMAN (Q96PN7) Transcriptional-regulating factor 1 (Transc...	29	6.9
51	NCKP1_ORYSA (Q6ZBH9) Probable protein NAP1 (Nck-associated prote...	29	6.9
52	SLU7_CANGA (Q6FRY5) Pre-mRNA-splicing factor SLU7	28	9.1
53	INVO_AOTTR (P24708) Involucrin	28	9.1
54	VID21_NEUCR (Q7SBU6) Chromatin modification-related protein vid-21	28	9.1
55	PPHLN_HUMAN (Q8NEY8) Periphilin-1 (Gastric cancer antigen Ga50)	28	9.1
56	RL4_BIFLO (Q8G416) 50S ribosomal protein L4	25	9.5

>RL5A_ORYSA (P49625) 60S ribosomal protein L5-1|
          Length = 304

 Score =  209 bits (532), Expect = 3e-54
 Identities = 100/118 (84%), Positives = 110/118 (93%)
 Frame = -1

Query: 467 DKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDM 288
           DKRFAGFKKDEK LD++IHRKYIYGGHVADYMRS+A+EEPEK+Q HFSEY+KKGI AD M
Sbjct: 177 DKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGM 236

Query: 287 EAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNNSAGA 114
           EA+YKKVHAAIRADP+MAKSTK  P THKRYN KKLTYE+RKASLVERLNALN+SAGA
Sbjct: 237 EALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAGA 294

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>RL5B_ORYSA (Q8L4L4) 60S ribosomal protein L5-2|
          Length = 304

 Score =  208 bits (529), Expect = 6e-54
 Identities = 99/118 (83%), Positives = 110/118 (93%)
 Frame = -1

Query: 467 DKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDM 288
           DKRFAGFKKDEK LD++IHRKYIYGGHVADYMRS+A+EEPEK+Q HFSEY+KKGI AD M
Sbjct: 177 DKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGM 236

Query: 287 EAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNNSAGA 114
           E++YKKVHAAIRADP+MAKSTK  P THKRYN KKLTYE+RKASLVERLNALN+SAGA
Sbjct: 237 ESLYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAGA 294

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>RL5_CUCSA (Q6UNT2) 60S ribosomal protein L5|
          Length = 302

 Score =  180 bits (456), Expect = 2e-45
 Identities = 84/116 (72%), Positives = 100/116 (86%)
 Frame = -1

Query: 467 DKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDM 288
           DKRFAG+ K+ + LD E+HRKYI+GGHVA YMR+L ++EPEKYQ+HFSEYIKKGI AD++
Sbjct: 176 DKRFAGYAKNGQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSEYIKKGIEADEL 235

Query: 287 EAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNNSA 120
           E +YKKVHAAIRA+P   KS KP PK HKRYN KKLTY+ERKA LVERLNALN++A
Sbjct: 236 EGLYKKVHAAIRANPIAKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAA 291

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>RL5_ARATH (P49227) 60S ribosomal protein L5|
          Length = 301

 Score =  170 bits (431), Expect = 1e-42
 Identities = 79/117 (67%), Positives = 95/117 (81%)
 Frame = -1

Query: 467 DKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDM 288
           DKRFAGF K+ K LDAEIHR YIYGGHV++YM+ L ++EPEK QTHFS YIKKG+ A+ +
Sbjct: 176 DKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESI 235

Query: 287 EAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNNSAG 117
           E +YKKVHAAIRA+P+  K+ K APK HKRYN KKLTYEERK  L+ER+ ALN + G
Sbjct: 236 EEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGAGG 292

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>RL5_SOLME (P93779) 60S ribosomal protein L5 (Fragment)|
          Length = 121

 Score =  162 bits (410), Expect = 4e-40
 Identities = 77/109 (70%), Positives = 88/109 (80%)
 Frame = -1

Query: 443 KDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVH 264
           KD K LDAE+HRKYIYGGHVA YM  L ++EPEKYQ+HFS YIK  ++ D++E +YKKVH
Sbjct: 3   KDSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVH 62

Query: 263 AAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNNSAG 117
           AAIR DPS  KS K  PKTHKRYN KKLTYEERKA L+ERLNALN + G
Sbjct: 63  AAIRPDPSPKKSQKQPPKTHKRYNLKKLTYEERKAKLIERLNALNAAGG 111

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>RL5_BOMMO (O76190) 60S ribosomal protein L5|
          Length = 299

 Score =  108 bits (270), Expect = 7e-24
 Identities = 56/118 (47%), Positives = 77/118 (65%), Gaps = 8/118 (6%)
 Frame = -1

Query: 464 KRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDME 285
           KRF G+  + K  +AE+HR +I+G HVA+YMRSL  ++ + ++  FS+YIK G++AD +E
Sbjct: 178 KRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIE 237

Query: 284 AVYKKVHAAIRADPS-MAKSTKPAPKTHKRYNPKKLTYEER-------KASLVERLNA 135
           A+YKK H AIRADPS   K  K      KR+N +KLT  ER       KAS ++RL A
Sbjct: 238 AIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQA 295

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>RL5_HELAN (O65353) 60S ribosomal protein L5|
          Length = 297

 Score =  106 bits (264), Expect = 3e-23
 Identities = 52/105 (49%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
 Frame = -1

Query: 464 KRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDME 285
           KRF GF  + K  +A++HR++I+G HVA+YMR LA+E+ E Y+  FS+YIK G++AD +E
Sbjct: 178 KRFPGFDSESKEFNADVHRQHIFGQHVAEYMRQLAEEDDEAYKRQFSQYIKLGLNADAIE 237

Query: 284 AVYKKVHAAIRADPSMAKSTKPA-PKTHKRYNPKKLTYEERKASL 153
            +YKK H AIRA+P+     K A PK  KR+  KKLT E+R+  +
Sbjct: 238 GLYKKAHEAIRANPARKTVAKKAHPK--KRWTEKKLTREQRQGKV 280

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>RL5_STYCL (Q26481) 60S ribosomal protein L5|
          Length = 294

 Score =  105 bits (262), Expect = 6e-23
 Identities = 48/101 (47%), Positives = 71/101 (70%)
 Frame = -1

Query: 464 KRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDME 285
           KRF G+  +     AE+HR +I+GGHV++YM+ L +E+ E ++  FS+YIK G++AD +E
Sbjct: 177 KRFPGYDDESGDFSAEVHRSHIFGGHVSNYMKELEEEDEEAFKRQFSQYIKHGVTADTVE 236

Query: 284 AVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERK 162
            +Y K HAAIR DP+  K T  A KT KR+N KK+T+ +R+
Sbjct: 237 EMYTKAHAAIREDPTPKKKTDFAGKT-KRWNRKKMTFSQRR 276

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>RL5_NEUCR (O59953) 60S ribosomal protein L5 (CPR4)|
          Length = 301

 Score =  102 bits (255), Expect = 4e-22
 Identities = 52/122 (42%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
 Frame = -1

Query: 467 DKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDM 288
           + RF G+  + + LDAE  +KYI+GGHVA+YM +LAD++ E+Y++ F+ YI+  + AD +
Sbjct: 180 ENRFPGYDMESEELDAETLKKYIFGGHVAEYMETLADDDEERYKSQFNRYIEDDLEADGL 239

Query: 287 EAVYKKVHAAIRADPSMAKSTKPAPKTHK--------RYNPKKLTYEERKASLVERLNAL 132
           E +Y + HAAIR DP   K+   APK  K        +Y   KLT E+R A + ER+ AL
Sbjct: 240 EDLYAEAHAAIREDP-FKKAESEAPKKTKEEWKAESLKYKKSKLTREQRAAGVQERIAAL 298

Query: 131 NN 126
            +
Sbjct: 299 RS 300

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>RL5_CAEEL (P49405) 60S ribosomal protein L5|
          Length = 293

 Score =  101 bits (251), Expect = 1e-21
 Identities = 49/108 (45%), Positives = 73/108 (67%)
 Frame = -1

Query: 467 DKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDM 288
           + RF GF ++ K  +AE HR  I G HVADYM  L +E+ ++Y+  FS+++  G++AD++
Sbjct: 176 ESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGLNADNL 235

Query: 287 EAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 144
            A Y+KVH+AIRAD S A   K A K  KR+  K+LTY+ERK  + ++
Sbjct: 236 VATYQKVHSAIRADASPA--AKKAAKPSKRHTAKRLTYDERKQRVADK 281

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>RL5_DUNSA (O22608) 60S ribosomal protein L5|
          Length = 271

 Score = 99.8 bits (247), Expect = 3e-21
 Identities = 45/94 (47%), Positives = 64/94 (68%)
 Frame = -1

Query: 467 DKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDM 288
           +KRF G+   +K LD E+ +KYIYGGHVA+Y  ++ +EEPEKYQ HFS Y++  I  D +
Sbjct: 177 EKRFVGYA--DKKLDTEVLQKYIYGGHVAEYQETMQEEEPEKYQAHFSSYVENEIEPDGI 234

Query: 287 EAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPK 186
           E +YK+VHA IR +P   K  +  P   KR++P+
Sbjct: 235 EDMYKEVHAKIRENPCPPKKERTKPADAKRWSPQ 268

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>RL5B_SCHPO (O74306) 60S ribosomal protein L5-B|
          Length = 294

 Score = 99.0 bits (245), Expect = 5e-21
 Identities = 57/120 (47%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
 Frame = -1

Query: 461 RFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEA 282
           RF GF  + + LD E  RKYIYGGHVA+YM  L D++ E+YQ  FS  I  GI +D +E 
Sbjct: 179 RFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIESDQLED 238

Query: 281 VYKKVHAAIRADPSMAKSTKPA---PKTHKRYNPKKLTYEERKASLVERLNALNNSAGAA 111
           +Y + +A IR DPS  KS K A        +Y  +KLT EERK    ER NA    AG A
Sbjct: 239 IYAEAYAKIREDPSFQKSGKDAAAFKAESLKYTQRKLTAEERK----ERFNAKVIEAGRA 294

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>RL5A_SCHPO (P52822) 60S ribosomal protein L5-A|
          Length = 294

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 56/120 (46%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
 Frame = -1

Query: 461 RFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEA 282
           RF GF  + + LD E  RKYIYGGHVA+YM  L D++ E+YQ  FS  I  GI +D +E 
Sbjct: 179 RFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIESDQLED 238

Query: 281 VYKKVHAAIRADPSMAKSTKPA---PKTHKRYNPKKLTYEERKASLVERLNALNNSAGAA 111
           +Y + +A IR DPS  KS K A        ++  +KLT EERK    ER NA    AG A
Sbjct: 239 IYAEAYAKIREDPSFQKSGKDAAAFKAESLKHTQRKLTAEERK----ERFNAKVIEAGRA 294

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>RL5B_XENLA (P15126) 60S ribosomal protein L5-B|
          Length = 295

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 44/107 (41%), Positives = 70/107 (65%)
 Frame = -1

Query: 464 KRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDME 285
           KRF G+  + K  + E+HRK+I+  ++A+YMR L +E+ + Y+  FS+YIK G++AD +E
Sbjct: 177 KRFPGYDSESKEFNPEVHRKHIFAQNIAEYMRLLMEEDEDAYKKQFSQYIKNGVAADQLE 236

Query: 284 AVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 144
            +YKK HA IR +P   K  K   K  KR+N  KL+ E++K  + ++
Sbjct: 237 DIYKKAHAGIRENPVHEKKPKKEVK-KKRWNRAKLSLEQKKDRVAQK 282

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>RL5A_XENLA (P15125) 60S ribosomal protein L5-A|
          Length = 295

 Score = 96.3 bits (238), Expect = 4e-20
 Identities = 45/107 (42%), Positives = 70/107 (65%)
 Frame = -1

Query: 464 KRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDME 285
           KRF G+  + K  + E+HRK+I+  +VA+YMR L +E+ + Y+  FS+YIK G++AD +E
Sbjct: 177 KRFPGYDSESKEFNPEVHRKHIFAQNVAEYMRLLMEEDEDAYKKQFSQYIKNGVTADQVE 236

Query: 284 AVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 144
            +YKK HA IR +P   K  K   K  KR+N  KL+ E++K  + ++
Sbjct: 237 DLYKKAHAGIRENPVHEKKPKKEVK-KKRWNRAKLSLEQKKDRVAQK 282

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>RL5_MACFA (Q4R5M0) 60S ribosomal protein L5|
          Length = 296

 Score = 95.9 bits (237), Expect = 5e-20
 Identities = 46/107 (42%), Positives = 69/107 (64%)
 Frame = -1

Query: 464 KRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDME 285
           KRF G+  + K  +AE+HRK+I G +VADYMR L +E+ + Y+  FS+YIK  ++ D ME
Sbjct: 177 KRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMME 236

Query: 284 AVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 144
            +YKK HAAIR +P   K  K   K  KR+N  K++  ++K  + ++
Sbjct: 237 EMYKKAHAAIRENPVYEKKPKKEVK-KKRWNRPKMSLAQKKDRVAQK 282

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>RL5_HUMAN (P46777) 60S ribosomal protein L5|
          Length = 296

 Score = 95.9 bits (237), Expect = 5e-20
 Identities = 46/107 (42%), Positives = 69/107 (64%)
 Frame = -1

Query: 464 KRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDME 285
           KRF G+  + K  +AE+HRK+I G +VADYMR L +E+ + Y+  FS+YIK  ++ D ME
Sbjct: 177 KRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMME 236

Query: 284 AVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 144
            +YKK HAAIR +P   K  K   K  KR+N  K++  ++K  + ++
Sbjct: 237 EMYKKAHAAIRENPVYEKKPKKEVK-KKRWNRPKMSLAQKKDRVAQK 282

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>RL5_RAT (P09895) 60S ribosomal protein L5|
          Length = 296

 Score = 95.5 bits (236), Expect = 6e-20
 Identities = 46/107 (42%), Positives = 69/107 (64%)
 Frame = -1

Query: 464 KRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDME 285
           KRF G+  + K  +AE+HRK+I G +VADYMR L +E+ + Y+  FS+YIK  ++ D ME
Sbjct: 177 KRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNVTPDMME 236

Query: 284 AVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 144
            +YKK HAAIR +P   K  K   K  KR+N  K++  ++K  + ++
Sbjct: 237 EMYKKAHAAIRENPVYEKKPKREVK-KKRWNRPKMSLAQKKDRVAQK 282

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>RL5_MOUSE (P47962) 60S ribosomal protein L5|
          Length = 296

 Score = 95.5 bits (236), Expect = 6e-20
 Identities = 46/107 (42%), Positives = 69/107 (64%)
 Frame = -1

Query: 464 KRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDME 285
           KRF G+  + K  +AE+HRK+I G +VADYMR L +E+ + Y+  FS+YIK  ++ D ME
Sbjct: 177 KRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNVTPDMME 236

Query: 284 AVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 144
            +YKK HAAIR +P   K  K   K  KR+N  K++  ++K  + ++
Sbjct: 237 EMYKKAHAAIRENPVYEKKPKREVK-KKRWNRPKMSLAQKKDRVAQK 282

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>RL5_CHICK (P22451) 60S ribosomal protein L5|
          Length = 296

 Score = 95.1 bits (235), Expect = 8e-20
 Identities = 47/107 (43%), Positives = 68/107 (63%)
 Frame = -1

Query: 464 KRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDME 285
           KRF G+  + K  +AE+HRK+I G +VADYMR L +E+ + Y+  FS+YIK  I+ D ME
Sbjct: 177 KRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNITPDGME 236

Query: 284 AVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 144
            +YKK HAAIR +P   K  K   K  KR N  K++  ++K  + ++
Sbjct: 237 EMYKKAHAAIRDNPVHEKKPKREVK-KKRVNSTKMSLAQKKDRVAQK 282

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>RL5_YEAST (P26321) 60S ribosomal protein L5 (L1) (YL3) (Ribosomal 5S|
           RNA-binding protein)
          Length = 296

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 5/117 (4%)
 Frame = -1

Query: 467 DKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDM 288
           + RF G+  + + +D E+ R YI+GGHV+ YM  LAD++ E++   F  Y+   I AD +
Sbjct: 176 ENRFPGWDFETEEIDPELLRSYIFGGHVSQYMEELADDDEERFSELFKGYLADDIDADSL 235

Query: 287 EAVYKKVHAAIRADPSMAKSTKPAPKTH-----KRYNPKKLTYEERKASLVERLNAL 132
           E +Y   H AIRADP+   + K   K       K+Y   KL+ EER A +  ++ AL
Sbjct: 236 EDIYTSAHEAIRADPAFKPTEKKFTKEQYAAESKKYRQTKLSKEERAARVAAKIAAL 292

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>RL5_ANOGA (O44248) 60S ribosomal protein L5|
          Length = 327

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 41/91 (45%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
 Frame = -1

Query: 464 KRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDME 285
           KRF G+  + KS +AE+HR +I+G HVA+YMR+L +E+ E ++  FS+YI  GI ADD+E
Sbjct: 178 KRFPGYSAENKSFNAEMHRDHIFGLHVANYMRTLEEEDEEAFKRQFSKYISLGIKADDIE 237

Query: 284 AVYKKVHAAIR-ADPSMAKSTKPAPKTHKRY 195
            +YK  HA+IR   PS     + +P++  R+
Sbjct: 238 NIYKNAHASIRKIPPSRRNPRRRSPRSGGRW 268

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>RL18_METKA (Q8TZA5) 50S ribosomal protein L18P|
          Length = 202

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 15/52 (28%), Positives = 35/52 (67%)
 Frame = -1

Query: 401 IYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRAD 246
           I G H+A+  R + +E+PE+Y+  FS+Y+++G+  +++   +++V + I  +
Sbjct: 147 IRGEHIANLARQIKEEDPEEYERRFSKYLERGLKPEELPEHFEEVKSKIEEE 198

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>RL18_PYRAE (Q8ZVV7) 50S ribosomal protein L18P|
          Length = 205

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 17/49 (34%), Positives = 29/49 (59%)
 Frame = -1

Query: 401 IYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 255
           I G HVA+Y   L +E PE Y+  FS Y+++G+  + +   +++V   I
Sbjct: 143 IKGKHVAEYAEKLKEENPEAYKARFSRYLQRGLEPEKLPEHFEEVKKKI 191

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>RL18_PYRAB (Q9V1V4) 50S ribosomal protein L18P|
          Length = 203

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 16/49 (32%), Positives = 30/49 (61%)
 Frame = -1

Query: 401 IYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 255
           I G H+A+Y R L +++ EK++  F  Y++KG+  + +   + +V A I
Sbjct: 144 IRGEHIAEYARMLKEQDEEKFRRQFGGYLEKGLDPEKLPEHFDEVKARI 192

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>RL18_SULTO (Q975J9) 50S ribosomal protein L18P|
          Length = 196

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 17/59 (28%), Positives = 34/59 (57%)
 Frame = -1

Query: 425 DAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRA 249
           D  I    I G H+A Y + L  E PE ++  FS+Y+++G+   D+ + ++++   I++
Sbjct: 135 DLGIKEDRIKGVHIASYAQKLEAENPELFKRLFSKYLERGLHPKDLPSHFEEILNKIKS 193

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>RL18_PYRHO (O59438) 50S ribosomal protein L18P|
          Length = 203

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 14/49 (28%), Positives = 31/49 (63%)
 Frame = -1

Query: 401 IYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 255
           I G H+A+Y R L +++ ++++  F  Y++KG+  + +   +++V A I
Sbjct: 144 IRGEHIAEYARMLKEQDEDRFRRQFGGYLEKGLDPEKLPEHFEEVKARI 192

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>RL18_PYRFU (Q9HH80) 50S ribosomal protein L18P (PfL18)|
          Length = 203

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 15/49 (30%), Positives = 30/49 (61%)
 Frame = -1

Query: 401 IYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 255
           I G H+A+Y + L +++ EK++  F  Y+ KG+  + +   +++V A I
Sbjct: 144 IRGEHIAEYAKMLKEQDEEKFRRQFGGYLVKGLDPEKLPEHFEEVKARI 192

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>RL18_METJA (P54044) 50S ribosomal protein L18P|
          Length = 195

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 14/49 (28%), Positives = 30/49 (61%)
 Frame = -1

Query: 401 IYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 255
           I G H+  Y   L +++ E+Y+  FS+Y++KG+  + +   ++++ A I
Sbjct: 143 IRGEHIKAYAEMLKEQDEERYKKQFSKYLEKGLEPEKLPEHFEEIKAKI 191

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>RL18_PYRKO (Q5JJG7) 50S ribosomal protein L18P|
          Length = 201

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 16/49 (32%), Positives = 30/49 (61%)
 Frame = -1

Query: 401 IYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 255
           I G H+A+Y ++L +E+   Y+  FS Y+ KG+  + +   +++V A I
Sbjct: 144 INGEHIANYAKALKEEDEALYRKQFSGYLVKGLEPEKLPEHFEEVKAKI 192

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>RL18_METVA (P14033) 50S ribosomal protein L18P|
          Length = 195

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 14/47 (29%), Positives = 29/47 (61%)
 Frame = -1

Query: 395 GGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 255
           G H+  Y   L ++E E Y+  FS+Y++KG++ +D+   ++++   I
Sbjct: 147 GTHIKQYAELLKEDE-EAYKKQFSKYLEKGLNPEDLPEHFEELKGKI 192

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>ZN674_HUMAN (Q2M3X9) Zinc finger protein 674|
          Length = 581

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = -1

Query: 338 QTHFSEYIKKGISADDMEAVYKKVHAAIR---ADPSMAKSTKPAPKTHKRYNPKKLTYE 171
           +TH  +   KGI       +Y+++H + +   ++   A   KP+P  H R + K+  YE
Sbjct: 328 KTHIRQAFYKGIKCTTSSLIYQRIHTSEKPQCSEHGKASDEKPSPTKHWRTHTKENIYE 386

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>RL18_METMP (Q6LXD4) 50S ribosomal protein L18P|
          Length = 193

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 14/36 (38%), Positives = 25/36 (69%)
 Frame = -1

Query: 395 GGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDM 288
           G HV +Y  SL  E+ + Y+  FS+Y++KG++ +D+
Sbjct: 145 GTHVKNYAESLK-EDADAYKKQFSKYLEKGLNPEDL 179

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>RL18_METTH (O26130) 50S ribosomal protein L18P|
          Length = 192

 Score = 32.0 bits (71), Expect = 0.82
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = -1

Query: 401 IYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 255
           I G H+ +Y  SL +EE  K    FS+Y+++G+S  D+   + ++   I
Sbjct: 143 IRGEHIMEYAESLDEEELRK---RFSKYLERGLSPVDLPEHFDEIKKRI 188

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>RL18_SULAC (O05640) 50S ribosomal protein L18P|
          Length = 197

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -1

Query: 401 IYGGHVADYMRSLADEEPEKYQTHFSEYIKKGI 303
           + G H++ Y + L +E  E Y   FS YI++G+
Sbjct: 143 VNGSHISAYAQKLKNENQELYNKLFSSYIQRGL 175

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>SRYD_DROME (P07664) Serendipity locus protein delta|
          Length = 433

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 19/66 (28%), Positives = 29/66 (43%)
 Frame = -1

Query: 467 DKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDM 288
           D  F    KD++  D EI R+++             DEE E+      E+I + +   D 
Sbjct: 127 DALFVELVKDQEESDTEIKREFV-------------DEEEEEDDDDDDEFICEDVDVGDS 173

Query: 287 EAVYKK 270
           EA+Y K
Sbjct: 174 EALYGK 179

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>UBF1A_XENLA (P25979) Nucleolar transcription factor 1-A (Upstream binding|
           factor 1-A) (UBF-1-A) (xUBF-1)
          Length = 677

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = -1

Query: 380 DYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPK 210
           DY + LA+++   Y+T F  ++ KG+S+ D  A YK+ ++  R   S AK   P  K
Sbjct: 531 DYYKKLAEDQQRVYRTQFDTWM-KGLSSQD-RAAYKEQNSNKR--KSTAKIQVPVAK 583

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>NCKP1_ARATH (Q5S2C4) Protein NAP1 (Nck-associated protein 1) (AtNAP1)|
           (AtNAP125) (p125Nap1) (NAP of plants) (ARP2/3 regulatory
           protein subunit NAPP) (Protein GNARLED)
          Length = 1425

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = +3

Query: 267 NLLVNCFHVIS*DSLLDVLTEVSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVLL 446
           ++L N  H +    L +V +    VLLG+L+C  P  +  + SID+  V L    ++ L 
Sbjct: 302 DILTNSAHPMRAQDLANVTSYREWVLLGYLVC--PDELLRVTSIDIALVVLKENLVVTLF 359

Query: 447 ETSKSL 464
               SL
Sbjct: 360 RDEVSL 365

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>CTR3_MOUSE (P70423) Cationic amino acid transporter 3 (CAT-3) (Solute carrier|
           family 7 member 3) (Cationic amino acid transporter y+)
          Length = 618

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +3

Query: 330 VSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVLLETSKSLVT 470
           +S  L G ++   PHV++  P    LA+ L +  LLVL  +  +LVT
Sbjct: 144 ISRTLKGTILLKMPHVLAEYPDFFALALVLLLTGLLVLGASKSALVT 190

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>SCNNB_RAT (P37090) Amiloride-sensitive sodium channel beta-subunit|
           (Epithelial Na+ channel beta subunit) (Beta ENaC)
           (Nonvoltage-gated sodium channel 1 beta subunit) (SCNEB)
           (Beta NaCH)
          Length = 638

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 329 SEFGTSRVPHLLATSCSQQHALHRCTCGESQHP 427
           S++ T+        SC Q H +H C+CG   +P
Sbjct: 373 SDYNTTYSIQACLHSCFQDHMIHNCSCGHYLYP 405

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>RL5_RABIT (P19949) 60S ribosomal protein L5 (Fragments)|
          Length = 101

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = -1

Query: 320 YIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 144
           Y +K +   D        HAAIR +P   K  K   K  KR+N  K++  ++K  + ++
Sbjct: 30  YARKRLVIQDKNKYNTPAHAAIRENPVYEKKPKREVK-KKRWNRPKMSLAQKKDRVAQK 87

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>VTA1_YEAST (Q06263) Vacuolar protein sorting-associated protein VTA1|
           (VPS20-associated protein 1)
          Length = 330

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 25/84 (29%), Positives = 40/84 (47%)
 Frame = -1

Query: 362 ADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKK 183
           AD   E+ QT   +  +  I+ D+ + V K+V     + PS     +PA   HK Y   +
Sbjct: 231 ADSVNEEEQT--VDKNEDAITKDEQQVVKKEVDLTRPSAPS-----EPAAAEHKSYTKDE 283

Query: 182 LTYEERKASLVERLNALNNSAGAA 111
           LT    +AS +E++  L   A +A
Sbjct: 284 LTKIMDRASKIEQIQKLAKYAISA 307

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>ZN622_CHICK (Q90Y35) Zinc finger protein 622 (Zn-finger protein C47)|
          Length = 405

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
 Frame = -1

Query: 464 KRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISAD--D 291
           KRF+ F   E  L ++ H          +  +       +K +    + ++KG++ +  D
Sbjct: 74  KRFSTFNAYENHLKSKKH---------LELEKKAVQAVSKKVKILNEKNLEKGLAVESVD 124

Query: 290 MEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNP 189
            + +   +  AIRA PS +    P P +H   +P
Sbjct: 125 KDEMNAAIQQAIRAQPSSSPKKVPLPPSHASSSP 158

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>CTR3_RAT (O08812) Cationic amino acid transporter 3 (CAT-3) (Solute carrier|
           family 7 member 3) (Cationic amino acid transporter y+)
          Length = 619

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 330 VSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVLLETSKSLVT 470
           +S  L G ++   PHV++  P    LA+ L +  LLVL      LVT
Sbjct: 144 ISQTLKGTILLNMPHVLAEYPDFFALALVLLLTGLLVLGANESGLVT 190

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>PTPR2_MOUSE (P80560) Receptor-type tyrosine-protein phosphatase N2 precursor|
           (EC 3.1.3.48) (R-PTP-N2) (PTP IA-2beta) (Protein
           tyrosine phosphatase-NP) (PTP-NP)
          Length = 1001

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 189 QEAHLRGEEGQPRREAQRPQQL 124
           QE+H RG EGQPR +   P+ +
Sbjct: 340 QESHGRGAEGQPREQTDAPETM 361

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>UBF1B_XENLA (P25980) Nucleolar transcription factor 1-B (Upstream binding|
           factor 1-B) (UBF-1-B) (xUBF-2)
          Length = 701

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = -1

Query: 380 DYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKT 207
           DY + LA+++   Y+T F  ++ KG+S  D  A YK+ +   R   S  K   P+ K+
Sbjct: 553 DYYKKLAEDQQRLYRTQFDTWM-KGLSTQD-RAAYKEQNTNKR--KSTTKIQAPSSKS 606

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>Y1664_METJA (Q59058) Hypothetical protein MJ1664|
          Length = 226

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
 Frame = -1

Query: 374 MRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVH---AAIRADPSMAKSTKPAPKTH 204
           M  L  +  ++ +  F EY   G S+D+   +YK  +   + IR   +M +     PK  
Sbjct: 1   MNKLKLKNEKEVRIKFGEYKLTGFSSDNGNNLYKLFNLTLSKIRYRKAMLEHNFQLPKIK 60

Query: 203 KRYNPKKLT--YEERKASLVERLNAL 132
           + + PK++T   +E     +E +N +
Sbjct: 61  ESHKPKEITEKIKENDIYFLELINEI 86

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>ODO1_RICCN (Q92J42) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)|
           (Alpha-ketoglutarate dehydrogenase)
          Length = 928

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 10/102 (9%)
 Frame = -1

Query: 470 GDKRFAGFKKDEKSLDAEIHRKYIYGG-------HVADYMRSLADEEPEKYQTHFSEYIK 312
           GD  F G     +SL       Y  GG       +   +  + AD    +Y T F++ I 
Sbjct: 351 GDAAFCGQGVVAESLSMSPLAAYDIGGILHFVINNQLGFTANAADTRASRYSTEFAKIIA 410

Query: 311 KGI---SADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRY 195
             I   + DD+EAV K  + A+       K        +++Y
Sbjct: 411 APILHVNGDDIEAVLKATNIAVEYRQKFGKDVVVEIICYRKY 452

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>OAF1_YEAST (P39720) Oleate-activated transcription factor 1|
          Length = 1047

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
 Frame = -1

Query: 395 GGHVADYMRSLADEEP---------EKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADP 243
           GG  +D +R+L +E           E+Y+ HF EY+   +   ++E   + +   I  DP
Sbjct: 319 GGEYSDLLRNLINECEAILPSYEIIERYKNHFYEYVYPSLPFIELEIFEESLSQTIFPDP 378

Query: 242 S 240
           +
Sbjct: 379 N 379

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>TREF1_HUMAN (Q96PN7) Transcriptional-regulating factor 1|
           (Transcriptional-regulating protein 132) (Zinc finger
           transcription factor TReP-132) (Zinc finger protein
           rapa)
          Length = 1200

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -3

Query: 234 QINQASSQ--DSQEVQPQEAHLRGEEGQPRREAQRPQQL 124
           Q  QA  Q    QE+Q Q   +R  + QP  + Q+PQQL
Sbjct: 274 QQQQAGQQRISMQEIQTQPQQIRPSQPQPPPQQQQPQQL 312

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>NCKP1_ORYSA (Q6ZBH9) Probable protein NAP1 (Nck-associated protein 1)|
           (P125Nap1) (NAP of plants)
          Length = 1359

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = +3

Query: 267 NLLVNCFHVIS*DSLLDVLTEVSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVL 443
           ++L N  H +    L +V +    VLLG+L+C  P  +  + SIDV  V L    +L L
Sbjct: 291 DILTNSAHPMRAQDLANVTSYREWVLLGYLVC--PDELLRVTSIDVAMVVLKENLVLSL 347

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>SLU7_CANGA (Q6FRY5) Pre-mRNA-splicing factor SLU7|
          Length = 318

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 10/102 (9%)
 Frame = -1

Query: 446 KKDEKSLDAEIHRKYIYGGH-----VADYMRSLAD----EEPEKYQTHFS-EYIKKGISA 297
           +KDEK  DA   R Y Y G      +  + +S  D     E   Y T    E +K G++ 
Sbjct: 99  RKDEKDWDARKDRWYGYSGKEYEEVLKKWEKSREDLNNTTEESAYDTDEEIEMMKLGLTP 158

Query: 296 DDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYE 171
            D+E   K     +R D   A   K    +   Y+PK   Y+
Sbjct: 159 KDLEQNIKGSSVRLRED--KAAYLKDIYSSTTNYDPKSRLYK 198

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>INVO_AOTTR (P24708) Involucrin|
          Length = 544

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
 Frame = -3

Query: 237 GQINQASSQDSQ-----EVQPQEAHLRGEEGQPRREAQRPQQL 124
           GQ+ Q   Q+ Q     + + Q  HL  +EGQP+   Q  +QL
Sbjct: 300 GQLKQLEEQEGQVKHLEQQEEQLKHLEQQEGQPKHPEQLEKQL 342

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>VID21_NEUCR (Q7SBU6) Chromatin modification-related protein vid-21|
          Length = 2189

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 21/83 (25%), Positives = 32/83 (38%)
 Frame = -3

Query: 375  HEVASR*GTREVPNSLQ*VHQEGNLS**HGSSLQEGSRCHPR*S*HGQINQASSQDSQEV 196
            H  A   G  + P   Q  HQ   +       L +GS+         Q+ Q+     Q  
Sbjct: 1670 HPQAQSQGQGQPPQQTQRAHQVQQVQGQQAHQLPQGSQSQQI---QQQVQQSPQARQQSQ 1726

Query: 195  QPQEAHLRGEEGQPRREAQRPQQ 127
            QPQ      ++ Q  ++ Q+PQQ
Sbjct: 1727 QPQMVRQPVQQAQQPQQLQQPQQ 1749

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>PPHLN_HUMAN (Q8NEY8) Periphilin-1 (Gastric cancer antigen Ga50)|
          Length = 458

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 216 SQDSQEVQPQEAHLRGEEGQPRREAQRPQQ 127
           SQ  + V+P  ++ R  EG P R+ +RP Q
Sbjct: 167 SQHRKSVRPGASYKRQNEGNPERDKERPVQ 196

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>RL4_BIFLO (Q8G416) 50S ribosomal protein L4|
          Length = 218

 Score = 24.6 bits (52), Expect(2) = 9.5
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 308 GISADDMEAVYKKVHAAIRADPSMAKSTKPAPKT 207
           G+SA+D++A    +H  + A  + A+    A KT
Sbjct: 27  GVSAEDVQAHIPLIHQVVTAQLAAARQGTHATKT 60



 Score = 22.3 bits (46), Expect(2) = 9.5
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 221 PAPKTHKRYNPKKLTYEERKASLVERLNA 135
           P P+ + +  PKK+     + +L +R NA
Sbjct: 99  PQPRDYSQRTPKKMKAAALRYALSDRANA 127


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,114,219
Number of Sequences: 219361
Number of extensions: 940543
Number of successful extensions: 3549
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 3418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3535
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result