ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags9a05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483631.1| Oryza sativa (japonica cultivar-group), mRNA 422 e-115
2dbj|AK070009.1| Oryza sativa (japonica cultivar-group) cDNA clon... 422 e-115
3gb|BT016877.1| Zea mays clone Contig710 mRNA sequence 329 8e-87
4gb|AY105878.1| Zea mays PCO080240 mRNA sequence 329 8e-87
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
6dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
7dbj|AK103732.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 6e-29
8dbj|AK103370.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 3e-21
9dbj|AK060397.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 3e-21
10dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
11dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
12dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
13gb|BT017747.1| Zea mays clone EL01N0450A10.c mRNA sequence 70 1e-08
14dbj|AK063524.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 1e-05
15gb|BT013713.1| Lycopersicon esculentum clone 132557F, mRNA sequence 56 2e-04
16ref|NM_117243.3| Arabidopsis thaliana SAY1 AT4G11740 (SAY1) mRNA... 50 0.010
17gb|AY064650.1| Arabidopsis thaliana unknown protein mRNA, comple... 50 0.010
18gb|AY042788.1| Arabidopsis thaliana Unknown protein (T5C23.170) ... 50 0.010
19emb|BX827865.1|CNS0A2Z0 Arabidopsis thaliana Full-length cDNA Co... 50 0.010
20gb|AY111183.1| Zea mays CL21530_1 mRNA sequence 50 0.010
21dbj|AB007767.1| Arabidopsis thaliana SAY1 mRNA for Ara4-interact... 50 0.010
22ref|NM_118433.3| Arabidopsis thaliana unknown protein AT4G23040 ... 48 0.041
23gb|AY142615.1| Arabidopsis thaliana unknown protein (At4g23040) ... 48 0.041
24gb|AF360264.1| Arabidopsis thaliana unknown protein (At4g23040) ... 48 0.041
25emb|BX828365.1|CNS0A3YR Arabidopsis thaliana Full-length cDNA Co... 48 0.041
26gb|AY105821.1| Zea mays PCO142874 mRNA sequence 46 0.16
27gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.65
28emb|AL161558.2|ATCHRIV58 Arabidopsis thaliana DNA chromosome 4, ... 44 0.65
29emb|AL031018.1|ATF7H19 Arabidopsis thaliana DNA chromosome 4, BA... 44 0.65
30gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 geno... 44 0.65
31gb|AC008541.6| Homo sapiens chromosome 5 clone CTC-498M5, comple... 44 0.65
32gb|AC106767.2| Homo sapiens chromosome 5 clone RP11-269M17, comp... 44 0.65
33ref|XM_680738.1| PREDICTED: Danio rerio similar to keratin 17n (... 44 0.65
34gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 44 0.65
35dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.65
36gb|AF137263.1|AF137263 Bacteroides thetaiotaomicron 30S ribosoma... 44 0.65
37emb|BX255921.2| Zebrafish DNA sequence from clone CH211-236K19 i... 44 0.65
38gb|AC091494.9| Oryza sativa chromosome 3 BAC OSJNBa0070N04 genom... 44 0.65
39gb|DQ021478.1| Danio rerio Rad52 short isoform (Rad52) mRNA, com... 42 2.6
40gb|DQ021477.1| Danio rerio Rad52 long isoform (Rad52) mRNA, comp... 42 2.6
41gb|BC098627.1| Danio rerio RAD52 homolog (S. cerevisiae), mRNA (... 42 2.6
42ref|NM_001024451.1| Danio rerio RAD52 homolog (S. cerevisiae) (r... 42 2.6
43emb|AL732604.5| Human DNA sequence from clone RP11-27G9 on chrom... 42 2.6
44emb|AL391416.9| Human DNA sequence from clone RP11-378G13 on chr... 42 2.6
45emb|AL390835.14| Human DNA sequence from clone RP5-1119O21 on ch... 42 2.6
46gb|AC164311.4| Mus musculus BAC clone RP23-144H18 from chromosom... 42 2.6
47emb|BX546452.9| Zebrafish DNA sequence from clone DKEYP-8B11 in ... 42 2.6
48gb|AC102462.19| Mus musculus chromosome 1, clone RP24-327F2, com... 42 2.6
49emb|CR354611.10| Zebrafish DNA sequence from clone CH211-249B21 ... 42 2.6
50emb|BX004889.8| Zebrafish DNA sequence from clone DKEY-65P15 in ... 42 2.6
51gb|AC141646.4| Mus musculus BAC clone RP23-84E4 from chromosome ... 42 2.6 
>ref|XM_483631.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2141

 Score =  422 bits (213), Expect = e-115
 Identities = 435/509 (85%)
 Strand = Plus / Minus

                                                                        
Query: 228  ctatcctgaaatttgttctagaaacaaggcctcctgtttgctgttgaggcccacatcact 287
            |||||||||||| || |||||||||||||| ||||| ||||| |||||||| | ||||||
Sbjct: 1875 ctatcctgaaatctgctctagaaacaaggcttcctgcttgctattgaggccaagatcact 1816

                                                                        
Query: 288  caacgacatctgacactcttcgttggtgaatgcacgcctggggtaagacctcaccagtct 347
             || ||||||||| ||||   || |||||||||||||||||| |||||||||||||| ||
Sbjct: 1815 taaagacatctgagactcagagtcggtgaatgcacgcctgggataagacctcaccagcct 1756

                                                                        
Query: 348  ataggttcctggcttgaacgtcttgctgatgtctatgaaatcaaacagaacctggagctg 407
            |||||||||||| ||||| ||| ||  ||| |||||||||||||| || ||||| || | 
Sbjct: 1755 ataggttcctggtttgaaagtcctggagatatctatgaaatcaaaaaggacctgaaggtt 1696

                                                                        
Query: 408  gtcagatttcaaaaagcgccttccctggcgactgccatcaggcatgcgaactacaactgt 467
            ||| ||||||| ||||||||||||||| ||||  ||||||||||||||||||||||| ||
Sbjct: 1695 gtcggatttcataaagcgccttccctgacgacgaccatcaggcatgcgaactacaacagt 1636

                                                                        
Query: 468  gacggctccttcagcatttggcagtggctcctttggtaatgatgctcgtttggctgcaag 527
            |||||| ||| || ||| ||| | |||||||||||| ||||||||| |||||||||||||
Sbjct: 1635 gacggcccctacatcatctggtaatggctcctttggcaatgatgcttgtttggctgcaag 1576

                                                                        
Query: 528  catggactccaactcctcttcctcaagttgcttcctcagcttttcctcgttcttttgctt 587
            | |||||||||| ||||||||||| ||||| || ||  ||||||| || | || ||| ||
Sbjct: 1575 cttggactccaattcctcttcctcgagttgttttcttcgcttttcttcctcctcttgttt 1516

                                                                        
Query: 588  ttccatttcaattgcagcttctcttgcagcagcttcttctaatctacggagctcagcatc 647
            || | || |||| |||||||||||| |||||||  |||||||||| ||||||||||| ||
Sbjct: 1515 ttgctttgcaatagcagcttctctttcagcagcagcttctaatctgcggagctcagcctc 1456

                                                                        
Query: 648  ctccacagccttcaactctttttctctatcagcttggagagctgcaagatactcatcatc 707
            || | | |||||||| ||||||||||  ||||||| ||||| ||| ||||||||||| ||
Sbjct: 1455 ctgctctgccttcaattctttttctcggtcagcttcgagagatgctagatactcatcgtc 1396

                                         
Query: 708  ctgctgctcccttaacaacctctgtgcag 736
            ||||||||||||||||||||  |||||||
Sbjct: 1395 ctgctgctcccttaacaaccgttgtgcag 1367
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>dbj|AK070009.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036E15, full
            insert sequence
          Length = 2141

 Score =  422 bits (213), Expect = e-115
 Identities = 435/509 (85%)
 Strand = Plus / Minus

                                                                        
Query: 228  ctatcctgaaatttgttctagaaacaaggcctcctgtttgctgttgaggcccacatcact 287
            |||||||||||| || |||||||||||||| ||||| ||||| |||||||| | ||||||
Sbjct: 1875 ctatcctgaaatctgctctagaaacaaggcttcctgcttgctattgaggccaagatcact 1816

                                                                        
Query: 288  caacgacatctgacactcttcgttggtgaatgcacgcctggggtaagacctcaccagtct 347
             || ||||||||| ||||   || |||||||||||||||||| |||||||||||||| ||
Sbjct: 1815 taaagacatctgagactcagagtcggtgaatgcacgcctgggataagacctcaccagcct 1756

                                                                        
Query: 348  ataggttcctggcttgaacgtcttgctgatgtctatgaaatcaaacagaacctggagctg 407
            |||||||||||| ||||| ||| ||  ||| |||||||||||||| || ||||| || | 
Sbjct: 1755 ataggttcctggtttgaaagtcctggagatatctatgaaatcaaaaaggacctgaaggtt 1696

                                                                        
Query: 408  gtcagatttcaaaaagcgccttccctggcgactgccatcaggcatgcgaactacaactgt 467
            ||| ||||||| ||||||||||||||| ||||  ||||||||||||||||||||||| ||
Sbjct: 1695 gtcggatttcataaagcgccttccctgacgacgaccatcaggcatgcgaactacaacagt 1636

                                                                        
Query: 468  gacggctccttcagcatttggcagtggctcctttggtaatgatgctcgtttggctgcaag 527
            |||||| ||| || ||| ||| | |||||||||||| ||||||||| |||||||||||||
Sbjct: 1635 gacggcccctacatcatctggtaatggctcctttggcaatgatgcttgtttggctgcaag 1576

                                                                        
Query: 528  catggactccaactcctcttcctcaagttgcttcctcagcttttcctcgttcttttgctt 587
            | |||||||||| ||||||||||| ||||| || ||  ||||||| || | || ||| ||
Sbjct: 1575 cttggactccaattcctcttcctcgagttgttttcttcgcttttcttcctcctcttgttt 1516

                                                                        
Query: 588  ttccatttcaattgcagcttctcttgcagcagcttcttctaatctacggagctcagcatc 647
            || | || |||| |||||||||||| |||||||  |||||||||| ||||||||||| ||
Sbjct: 1515 ttgctttgcaatagcagcttctctttcagcagcagcttctaatctgcggagctcagcctc 1456

                                                                        
Query: 648  ctccacagccttcaactctttttctctatcagcttggagagctgcaagatactcatcatc 707
            || | | |||||||| ||||||||||  ||||||| ||||| ||| ||||||||||| ||
Sbjct: 1455 ctgctctgccttcaattctttttctcggtcagcttcgagagatgctagatactcatcgtc 1396

                                         
Query: 708  ctgctgctcccttaacaacctctgtgcag 736
            ||||||||||||||||||||  |||||||
Sbjct: 1395 ctgctgctcccttaacaaccgttgtgcag 1367
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>gb|BT016877.1| Zea mays clone Contig710 mRNA sequence
          Length = 1037

 Score =  329 bits (166), Expect = 8e-87
 Identities = 358/422 (84%)
 Strand = Plus / Plus

                                                                       
Query: 313 gtgaatgcacgcctggggtaagacctcaccagtctataggttcctggcttgaacgtcttg 372
           ||||| ||||||||||| ||||||||| |||||||||| |||||||| ||||| |||  |
Sbjct: 495 gtgaaggcacgcctgggataagacctcgccagtctataagttcctggtttgaaagtccgg 554

                                                                       
Query: 373 ctgatgtctatgaaatcaaacagaacctggagctggtcagatttcaaaaagcgccttccc 432
           |||||||||||||||||||| |||  ||| |||  ||||||||| | |||||||| ||| 
Sbjct: 555 ctgatgtctatgaaatcaaaaagatactgaagcctgtcagatttgagaaagcgccgtcct 614

                                                                       
Query: 433 tggcgactgccatcaggcatgcgaactacaactgtgacggctccttcagcatttggcagt 492
            | ||||| |||||||||||||| ||||| |||||||| || || ||  ||||| | |||
Sbjct: 615 cgacgactaccatcaggcatgcggactaccactgtgacagccccctcgtcattttgtagt 674

                                                                       
Query: 493 ggctcctttggtaatgatgctcgtttggctgcaagcatggactccaactcctcttcctca 552
           |||||||| |||| ||||||| |||||||||||||| |||| ||||||||||||||||||
Sbjct: 675 ggctccttaggtagtgatgcttgtttggctgcaagcttggattccaactcctcttcctca 734

                                                                       
Query: 553 agttgcttcctcagcttttcctcgttcttttgcttttccatttcaattgcagcttctctt 612
            |||| ||| | ||||| ||||| |  | || |||||    |||||  ||||| ||||||
Sbjct: 735 cgttgtttctttagcttctcctcctcttctttcttttgacgttcaagagcagcctctctt 794

                                                                       
Query: 613 gcagcagcttcttctaatctacggagctcagcatcctccacagccttcaactctttttct 672
           || |||||||| ||||  || || || ||||| |||| ||||||||||||||||||||||
Sbjct: 795 gctgcagcttcctctaccctgcgaagttcagcctcctgcacagccttcaactctttttct 854

                                                                       
Query: 673 ctatcagcttggagagctgcaagatactcatcatcctgctgctcccttaacaacctctgt 732
           | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 855 cgatcagcttggagagcagcaagatactcatcatcctgctgctcccttaacaaccgctgt 914

             
Query: 733 gc 734
           ||
Sbjct: 915 gc 916
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>gb|AY105878.1| Zea mays PCO080240 mRNA sequence
          Length = 794

 Score =  329 bits (166), Expect = 8e-87
 Identities = 358/422 (84%)
 Strand = Plus / Minus

                                                                       
Query: 313 gtgaatgcacgcctggggtaagacctcaccagtctataggttcctggcttgaacgtcttg 372
           ||||| ||||||||||| ||||||||| |||||||||| |||||||| ||||| |||  |
Sbjct: 502 gtgaaggcacgcctgggataagacctcgccagtctataagttcctggtttgaaagtccgg 443

                                                                       
Query: 373 ctgatgtctatgaaatcaaacagaacctggagctggtcagatttcaaaaagcgccttccc 432
           |||||||||||||||||||| |||  ||| |||  ||||||||| | |||||||| ||| 
Sbjct: 442 ctgatgtctatgaaatcaaaaagatactgaagcctgtcagatttgagaaagcgccgtcct 383

                                                                       
Query: 433 tggcgactgccatcaggcatgcgaactacaactgtgacggctccttcagcatttggcagt 492
            | ||||| |||||||||||||| ||||| |||||||| || || ||  ||||| | |||
Sbjct: 382 cgacgactaccatcaggcatgcggactaccactgtgacagccccctcgtcattttgtagt 323

                                                                       
Query: 493 ggctcctttggtaatgatgctcgtttggctgcaagcatggactccaactcctcttcctca 552
           |||||||| |||| ||||||| |||||||||||||| |||| ||||||||||||||||||
Sbjct: 322 ggctccttaggtagtgatgcttgtttggctgcaagcttggattccaactcctcttcctca 263

                                                                       
Query: 553 agttgcttcctcagcttttcctcgttcttttgcttttccatttcaattgcagcttctctt 612
            |||| ||| | ||||| ||||| |  | || |||||    |||||  ||||| ||||||
Sbjct: 262 cgttgtttctttagcttctcctcctcttctttcttttgacgttcaagagcagcctctctt 203

                                                                       
Query: 613 gcagcagcttcttctaatctacggagctcagcatcctccacagccttcaactctttttct 672
           || |||||||| ||||  || || || ||||| |||| ||||||||||||||||||||||
Sbjct: 202 gctgcagcttcctctaccctgcgaagttcagcctcctgcacagccttcaactctttttct 143

                                                                       
Query: 673 ctatcagcttggagagctgcaagatactcatcatcctgctgctcccttaacaacctctgt 732
           | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 142 cgatcagcttggagagcagcaagatactcatcatcctgctgctcccttaacaaccgctgt 83

             
Query: 733 gc 734
           ||
Sbjct: 82  gc 81
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  145 bits (73), Expect = 2e-31
 Identities = 118/133 (88%)
 Strand = Plus / Plus

                                                                            
Query: 412      gatttcaaaaagcgccttccctggcgactgccatcaggcatgcgaactacaactgtgacg 471
                ||||||| ||||||||||||||| ||||  ||||||||||||||||||||||| ||||||
Sbjct: 27359115 gatttcataaagcgccttccctgacgacgaccatcaggcatgcgaactacaacagtgacg 27359174

                                                                            
Query: 472      gctccttcagcatttggcagtggctcctttggtaatgatgctcgtttggctgcaagcatg 531
                || ||| || ||| ||| | |||||||||||| ||||||||| |||||||||||||| ||
Sbjct: 27359175 gcccctacatcatctggtaatggctcctttggcaatgatgcttgtttggctgcaagcttg 27359234

                             
Query: 532      gactccaactcct 544
                |||||||| ||||
Sbjct: 27359235 gactccaattcct 27359247



 Score =  109 bits (55), Expect = 1e-20
 Identities = 100/115 (86%)
 Strand = Plus / Plus

                                                                            
Query: 228      ctatcctgaaatttgttctagaaacaaggcctcctgtttgctgttgaggcccacatcact 287
                |||||||||||| || |||||||||||||| ||||| ||||| |||||||| | ||||||
Sbjct: 27358162 ctatcctgaaatctgctctagaaacaaggcttcctgcttgctattgaggccaagatcact 27358221

                                                                       
Query: 288      caacgacatctgacactcttcgttggtgaatgcacgcctggggtaagacctcacc 342
                 || ||||||||| ||||   || |||||||||||||||||| ||||||||||||
Sbjct: 27358222 taaagacatctgagactcagagtcggtgaatgcacgcctgggataagacctcacc 27358276



 Score =  103 bits (52), Expect = 8e-19
 Identities = 139/168 (82%)
 Strand = Plus / Plus

                                                                            
Query: 542      cctcttcctcaagttgcttcctcagcttttcctcgttcttttgcttttccatttcaattg 601
                |||||||||| ||||| || ||  ||||||| || | || ||| |||| | || |||| |
Sbjct: 27359769 cctcttcctcgagttgttttcttcgcttttcttcctcctcttgtttttgctttgcaatag 27359828

                                                                            
Query: 602      cagcttctcttgcagcagcttcttctaatctacggagctcagcatcctccacagccttca 661
                ||||||||||| |||||||  |||||||||| ||||||||||| |||| | | |||||||
Sbjct: 27359829 cagcttctctttcagcagcagcttctaatctgcggagctcagcctcctgctctgccttca 27359888

                                                                
Query: 662      actctttttctctatcagcttggagagctgcaagatactcatcatcct 709
                | ||||||||||  ||||||| ||||| ||| ||||||||||| ||||
Sbjct: 27359889 attctttttctcggtcagcttcgagagatgctagatactcatcgtcct 27359936



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                            
Query: 340      accagtctataggttcctggcttgaacgtcttgctgatgtctatgaaatcaaacagaacc 399
                ||||| |||||||||||||| ||||| ||| ||  ||| |||||||||||||| || |||
Sbjct: 27358966 accagcctataggttcctggtttgaaagtcctggagatatctatgaaatcaaaaaggacc 27359025

                  
Query: 400      tg 401
                ||
Sbjct: 27359026 tg 27359027



 Score = 44.1 bits (22), Expect = 0.65
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 707      cctgctgctcccttaacaacctctgtgcag 736
                |||||||||||||||||||||  |||||||
Sbjct: 27360019 cctgctgctcccttaacaaccgttgtgcag 27360048
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>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1323_A06
          Length = 95665

 Score =  145 bits (73), Expect = 2e-31
 Identities = 118/133 (88%)
 Strand = Plus / Plus

                                                                         
Query: 412   gatttcaaaaagcgccttccctggcgactgccatcaggcatgcgaactacaactgtgacg 471
             ||||||| ||||||||||||||| ||||  ||||||||||||||||||||||| ||||||
Sbjct: 60642 gatttcataaagcgccttccctgacgacgaccatcaggcatgcgaactacaacagtgacg 60701

                                                                         
Query: 472   gctccttcagcatttggcagtggctcctttggtaatgatgctcgtttggctgcaagcatg 531
             || ||| || ||| ||| | |||||||||||| ||||||||| |||||||||||||| ||
Sbjct: 60702 gcccctacatcatctggtaatggctcctttggcaatgatgcttgtttggctgcaagcttg 60761

                          
Query: 532   gactccaactcct 544
             |||||||| ||||
Sbjct: 60762 gactccaattcct 60774



 Score =  109 bits (55), Expect = 1e-20
 Identities = 100/115 (86%)
 Strand = Plus / Plus

                                                                         
Query: 228   ctatcctgaaatttgttctagaaacaaggcctcctgtttgctgttgaggcccacatcact 287
             |||||||||||| || |||||||||||||| ||||| ||||| |||||||| | ||||||
Sbjct: 59689 ctatcctgaaatctgctctagaaacaaggcttcctgcttgctattgaggccaagatcact 59748

                                                                    
Query: 288   caacgacatctgacactcttcgttggtgaatgcacgcctggggtaagacctcacc 342
              || ||||||||| ||||   || |||||||||||||||||| ||||||||||||
Sbjct: 59749 taaagacatctgagactcagagtcggtgaatgcacgcctgggataagacctcacc 59803



 Score =  103 bits (52), Expect = 8e-19
 Identities = 139/168 (82%)
 Strand = Plus / Plus

                                                                         
Query: 542   cctcttcctcaagttgcttcctcagcttttcctcgttcttttgcttttccatttcaattg 601
             |||||||||| ||||| || ||  ||||||| || | || ||| |||| | || |||| |
Sbjct: 61296 cctcttcctcgagttgttttcttcgcttttcttcctcctcttgtttttgctttgcaatag 61355

                                                                         
Query: 602   cagcttctcttgcagcagcttcttctaatctacggagctcagcatcctccacagccttca 661
             ||||||||||| |||||||  |||||||||| ||||||||||| |||| | | |||||||
Sbjct: 61356 cagcttctctttcagcagcagcttctaatctgcggagctcagcctcctgctctgccttca 61415

                                                             
Query: 662   actctttttctctatcagcttggagagctgcaagatactcatcatcct 709
             | ||||||||||  ||||||| ||||| ||| ||||||||||| ||||
Sbjct: 61416 attctttttctcggtcagcttcgagagatgctagatactcatcgtcct 61463



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                         
Query: 340   accagtctataggttcctggcttgaacgtcttgctgatgtctatgaaatcaaacagaacc 399
             ||||| |||||||||||||| ||||| ||| ||  ||| |||||||||||||| || |||
Sbjct: 60493 accagcctataggttcctggtttgaaagtcctggagatatctatgaaatcaaaaaggacc 60552

               
Query: 400   tg 401
             ||
Sbjct: 60553 tg 60554



 Score = 44.1 bits (22), Expect = 0.65
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 707   cctgctgctcccttaacaacctctgtgcag 736
             |||||||||||||||||||||  |||||||
Sbjct: 61546 cctgctgctcccttaacaaccgttgtgcag 61575
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>dbj|AK103732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138F05, full
            insert sequence
          Length = 2568

 Score =  137 bits (69), Expect = 6e-29
 Identities = 123/141 (87%)
 Strand = Plus / Minus

                                                                        
Query: 596  caattgcagcttctcttgcagcagcttcttctaatctacggagctcagcatcctccacag 655
            |||| |||||||||||| |||||||  |||||||||| ||||||||||| |||| | | |
Sbjct: 1515 caatagcagcttctctttcagcagcagcttctaatctgcggagctcagcctcctgctctg 1456

                                                                        
Query: 656  ccttcaactctttttctctatcagcttggagagctgcaagatactcatcatcctgctgct 715
            ||||||| ||||||||||  ||||||| ||||| ||| ||||||||||| ||||||||||
Sbjct: 1455 ccttcaattctttttctcggtcagcttcgagagatgctagatactcatcgtcctgctgct 1396

                                 
Query: 716  cccttaacaacctctgtgcag 736
            ||||||||||||  |||||||
Sbjct: 1395 cccttaacaaccgttgtgcag 1375
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>dbj|AK103370.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126P18, full
            insert sequence
          Length = 2065

 Score =  111 bits (56), Expect = 3e-21
 Identities = 185/228 (81%)
 Strand = Plus / Minus

                                                                        
Query: 505  aatgatgctcgtttggctgcaagcatggactccaactcctcttcctcaagttgcttcctc 564
            ||||||||| |||||| ||||||  ||||||| | |||||||||||| ||||| ||  | 
Sbjct: 1510 aatgatgcttgtttggatgcaagactggactctagctcctcttcctccagttgtttttta 1451

                                                                        
Query: 565  agcttttcctcgttcttttgcttttccatttcaattgcagcttctcttgcagcagcttct 624
             || ||||||| | || |||||| |   ||||||  ||||||||||||||||||| ||||
Sbjct: 1450 cgcctttcctcttcctcttgcttctgtttttcaagggcagcttctcttgcagcagtttct 1391

                                                                        
Query: 625  tctaatctacggagctcagcatcctccacagccttcaactctttttctctatcagcttgg 684
            || |  | ||| ||||| || ||||  |  ||||||||||||||||||  ||||||||||
Sbjct: 1390 tccaggcgacgaagctcggcctcctgtagggccttcaactctttttcttgatcagcttgg 1331

                                                            
Query: 685  agagctgcaagatactcatcatcctgctgctcccttaacaacctctgt 732
            || | |||||| || ||||||||||||||||| | |||||||| ||||
Sbjct: 1330 agtgatgcaaggtattcatcatcctgctgctcacgtaacaaccgctgt 1283



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 114/140 (81%)
 Strand = Plus / Minus

                                                                        
Query: 340  accagtctataggttcctggcttgaacgtcttgctgatgtctatgaaatcaaacagaacc 399
            |||||||| ||||||||||||||  | ||| |||  ||||||| ||||||||| || | |
Sbjct: 1675 accagtctgtaggttcctggcttataagtcctgccaatgtctaagaaatcaaaaaggaac 1616

                                                                        
Query: 400  tggagctggtcagatttcaaaaagcgccttccctggcgactgccatcaggcatgcgaact 459
            || || |  | |||||||| |||||| |  ||||| ||||| |||||||||||||| |||
Sbjct: 1615 tgaagtttatgagatttcagaaagcgacgcccctgtcgactaccatcaggcatgcggact 1556

                                
Query: 460  acaactgtgacggctccttc 479
            |||| |||||| || |||||
Sbjct: 1555 acaagtgtgacagcaccttc 1536
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>dbj|AK060397.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-B05, full
           insert sequence
          Length = 1208

 Score =  111 bits (56), Expect = 3e-21
 Identities = 185/228 (81%)
 Strand = Plus / Minus

                                                                       
Query: 505 aatgatgctcgtttggctgcaagcatggactccaactcctcttcctcaagttgcttcctc 564
           ||||||||| |||||| ||||||  ||||||| | |||||||||||| ||||| ||  | 
Sbjct: 666 aatgatgcttgtttggatgcaagactggactctagctcctcttcctccagttgtttttta 607

                                                                       
Query: 565 agcttttcctcgttcttttgcttttccatttcaattgcagcttctcttgcagcagcttct 624
            || ||||||| | || |||||| |   ||||||  ||||||||||||||||||| ||||
Sbjct: 606 cgcctttcctcttcctcttgcttctgtttttcaagggcagcttctcttgcagcagtttct 547

                                                                       
Query: 625 tctaatctacggagctcagcatcctccacagccttcaactctttttctctatcagcttgg 684
           || |  | ||| ||||| || ||||  |  ||||||||||||||||||  ||||||||||
Sbjct: 546 tccaggcgacgaagctcggcctcctgtagggccttcaactctttttcttgatcagcttgg 487

                                                           
Query: 685 agagctgcaagatactcatcatcctgctgctcccttaacaacctctgt 732
           || | |||||| || ||||||||||||||||| | |||||||| ||||
Sbjct: 486 agtgatgcaaggtattcatcatcctgctgctcacgtaacaaccgctgt 439



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 139/169 (82%)
 Strand = Plus / Minus

                                                                       
Query: 311 tggtgaatgcacgcctggggtaagacctcaccagtctataggttcctggcttgaacgtct 370
           ||||||| |||||||| ||||| ||||| |||||||| ||||||||||||||  | ||| 
Sbjct: 860 tggtgaaagcacgccttgggtacgaccttaccagtctgtaggttcctggcttataagtcc 801

                                                                       
Query: 371 tgctgatgtctatgaaatcaaacagaacctggagctggtcagatttcaaaaagcgccttc 430
           |||  ||||||| ||||||||| || | ||| || |  | |||||||| |||||| |  |
Sbjct: 800 tgccaatgtctaagaaatcaaaaaggaactgaagtttatgagatttcagaaagcgacgcc 741

                                                            
Query: 431 cctggcgactgccatcaggcatgcgaactacaactgtgacggctccttc 479
           |||| ||||| |||||||||||||| ||||||| |||||| || |||||
Sbjct: 740 cctgtcgactaccatcaggcatgcggactacaagtgtgacagcaccttc 692
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 92/110 (83%)
 Strand = Plus / Plus

                                                                            
Query: 601      gcagcttctcttgcagcagcttcttctaatctacggagctcagcatcctccacagccttc 660
                ||||||||||||||||||| |||||| |  | ||| ||||| || ||||  |  ||||||
Sbjct: 20235639 gcagcttctcttgcagcagtttcttccaggcgacgaagctcggcctcctgtagggccttc 20235698

                                                                  
Query: 661      aactctttttctctatcagcttggagagctgcaagatactcatcatcctg 710
                ||||||||||||  |||||||||||| | |||||| || |||||||||||
Sbjct: 20235699 aactctttttcttgatcagcttggagtgatgcaaggtattcatcatcctg 20235748



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                            
Query: 411      agatttcaaaaagcgccttccctggcgactgccatcaggcatgcgaactacaactgtgac 470
                |||||||| |||||| |  ||||| ||||| |||||||||||||| ||||||| ||||||
Sbjct: 20234980 agatttcagaaagcgacgcccctgtcgactaccatcaggcatgcggactacaagtgtgac 20235039

                         
Query: 471      ggctccttc 479
                 || |||||
Sbjct: 20235040 agcaccttc 20235048



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                     
Query: 340      accagtctataggttcctggcttgaacgtcttgctgatgtctatgaaatcaaa 392
                |||||||| ||||||||||||||  | ||| |||  ||||||| |||||||||
Sbjct: 20234844 accagtctgtaggttcctggcttataagtcctgccaatgtctaagaaatcaaa 20234896
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>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1439_F07
          Length = 153743

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 92/110 (83%)
 Strand = Plus / Plus

                                                                         
Query: 601   gcagcttctcttgcagcagcttcttctaatctacggagctcagcatcctccacagccttc 660
             ||||||||||||||||||| |||||| |  | ||| ||||| || ||||  |  ||||||
Sbjct: 14766 gcagcttctcttgcagcagtttcttccaggcgacgaagctcggcctcctgtagggccttc 14825

                                                               
Query: 661   aactctttttctctatcagcttggagagctgcaagatactcatcatcctg 710
             ||||||||||||  |||||||||||| | |||||| || |||||||||||
Sbjct: 14826 aactctttttcttgatcagcttggagtgatgcaaggtattcatcatcctg 14875



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                         
Query: 411   agatttcaaaaagcgccttccctggcgactgccatcaggcatgcgaactacaactgtgac 470
             |||||||| |||||| |  ||||| ||||| |||||||||||||| ||||||| ||||||
Sbjct: 14107 agatttcagaaagcgacgcccctgtcgactaccatcaggcatgcggactacaagtgtgac 14166

                      
Query: 471   ggctccttc 479
              || |||||
Sbjct: 14167 agcaccttc 14175



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                  
Query: 340   accagtctataggttcctggcttgaacgtcttgctgatgtctatgaaatcaaa 392
             |||||||| ||||||||||||||  | ||| |||  ||||||| |||||||||
Sbjct: 13971 accagtctgtaggttcctggcttataagtcctgccaatgtctaagaaatcaaa 14023
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>dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0047P18
          Length = 169128

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 92/110 (83%)
 Strand = Plus / Plus

                                                                          
Query: 601    gcagcttctcttgcagcagcttcttctaatctacggagctcagcatcctccacagccttc 660
              ||||||||||||||||||| |||||| |  | ||| ||||| || ||||  |  ||||||
Sbjct: 129139 gcagcttctcttgcagcagtttcttccaggcgacgaagctcggcctcctgtagggccttc 129198

                                                                
Query: 661    aactctttttctctatcagcttggagagctgcaagatactcatcatcctg 710
              ||||||||||||  |||||||||||| | |||||| || |||||||||||
Sbjct: 129199 aactctttttcttgatcagcttggagtgatgcaaggtattcatcatcctg 129248



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                          
Query: 411    agatttcaaaaagcgccttccctggcgactgccatcaggcatgcgaactacaactgtgac 470
              |||||||| |||||| |  ||||| ||||| |||||||||||||| ||||||| ||||||
Sbjct: 128480 agatttcagaaagcgacgcccctgtcgactaccatcaggcatgcggactacaagtgtgac 128539

                       
Query: 471    ggctccttc 479
               || |||||
Sbjct: 128540 agcaccttc 128548



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                   
Query: 340    accagtctataggttcctggcttgaacgtcttgctgatgtctatgaaatcaaa 392
              |||||||| ||||||||||||||  | ||| |||  ||||||| |||||||||
Sbjct: 128344 accagtctgtaggttcctggcttataagtcctgccaatgtctaagaaatcaaa 128396
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>gb|BT017747.1| Zea mays clone EL01N0450A10.c mRNA sequence
          Length = 1413

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 657  cttcaactctttttctctatcagcttggagagctgcaagatactcatcatc 707
            ||||||||||||||||| ||||||||||||||  |||||||| ||||||||
Sbjct: 1075 cttcaactctttttctcgatcagcttggagaggagcaagatagtcatcatc 1025
to top
>dbj|AK063524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-A03, full
            insert sequence
          Length = 1297

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 675  atcagcttggagagctgcaagatactcatcatcctgctgctcccttaacaacctctgt 732
            |||||||||||| | |||||| || ||||||||||||||||| | |||||||| ||||
Sbjct: 1296 atcagcttggagtgatgcaaggtattcatcatcctgctgctcacgtaacaaccgctgt 1239
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>gb|BT013713.1| Lycopersicon esculentum clone 132557F, mRNA sequence
          Length = 2150

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                        
Query: 655  gccttcaactctttttctctatcagcttggagagctgcaagatactcatcatcctgctgc 714
            |||||||| || ||||||||||||||||| |  || ||| |||| |||||||||||||| 
Sbjct: 1531 gccttcaattccttttctctatcagcttgcaatgcagcatgatattcatcatcctgctgt 1472

                
Query: 715  tccc 718
            ||||
Sbjct: 1471 tccc 1468
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>ref|NM_117243.3| Arabidopsis thaliana SAY1 AT4G11740 (SAY1) mRNA, complete cds
          Length = 2035

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 691  gcaagatactcatcatcctgctgctcccttaacaacctctg 731
            |||| |||||||||||||||||| |||| || |||||||||
Sbjct: 1333 gcaacatactcatcatcctgctgttcccgtatcaacctctg 1293
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>gb|AY064650.1| Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 1225

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 691 gcaagatactcatcatcctgctgctcccttaacaacctctg 731
           |||| |||||||||||||||||| |||| || |||||||||
Sbjct: 716 gcaacatactcatcatcctgctgttcccgtatcaacctctg 676
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>gb|AY042788.1| Arabidopsis thaliana Unknown protein (T5C23.170) mRNA, complete cds
          Length = 1483

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 691 gcaagatactcatcatcctgctgctcccttaacaacctctg 731
           |||| |||||||||||||||||| |||| || |||||||||
Sbjct: 868 gcaacatactcatcatcctgctgttcccgtatcaacctctg 828
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>emb|BX827865.1|CNS0A2Z0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH29ZA04 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1915

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 691  gcaagatactcatcatcctgctgctcccttaacaacctctg 731
            |||| |||||||||||||||||| |||| || |||||||||
Sbjct: 1338 gcaacatactcatcatcctgctgttcccgtatcaacctctg 1298
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>gb|AY111183.1| Zea mays CL21530_1 mRNA sequence
          Length = 771

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 115/145 (79%)
 Strand = Plus / Plus

                                                                       
Query: 322 cgcctggggtaagacctcaccagtctataggttcctggcttgaacgtcttgctgatgtct 381
           ||||| ||||| | |||||||| ||| ||||| ||||||||| | ||| | |  ||||||
Sbjct: 353 cgccttgggtatgtcctcaccaatctgtaggtccctggcttgcaagtcctcccaatgtct 412

                                                                       
Query: 382 atgaaatcaaacagaacctggagctggtcagatttcaaaaagcgccttccctggcgactg 441
           | ||||||||| || | ||| || |  |||| ||| | |||||| |  ||||| ||||| 
Sbjct: 413 aagaaatcaaataggaactgaagtttatcagttttgagaaagcggcgcccctgtcgacta 472

                                    
Query: 442 ccatcaggcatgcgaactacaactg 466
           ||||||||||| || ||||||||||
Sbjct: 473 ccatcaggcattcggactacaactg 497



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 78/98 (79%)
 Strand = Plus / Plus

                                                                       
Query: 635 ggagctcagcatcctccacagccttcaactctttttctctatcagcttggagagctgcaa 694
           |||||||||||||||  |  |||||||||||     ||  ||||||||| || |  ||||
Sbjct: 666 ggagctcagcatcctgtaaggccttcaactcnnnnncttgatcagcttgtagtgacgcaa 725

                                                 
Query: 695 gatactcatcatcctgctgctcccttaacaacctctgt 732
           | |||||||| ||||||||||| ||||| |||| ||||
Sbjct: 726 ggtactcatcgtcctgctgctctcttaataaccgctgt 763



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 530 tggactccaactcctcttcctcaagttgc 558
           ||||||| | |||||||||||||||||||
Sbjct: 561 tggactctagctcctcttcctcaagttgc 589
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>dbj|AB007767.1| Arabidopsis thaliana SAY1 mRNA for Ara4-interacting protein, complete
            cds
          Length = 2030

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 691  gcaagatactcatcatcctgctgctcccttaacaacctctg 731
            |||| |||||||||||||||||| |||| || |||||||||
Sbjct: 1351 gcaacatactcatcatcctgctgttcccgtatcaacctctg 1311
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>ref|NM_118433.3| Arabidopsis thaliana unknown protein AT4G23040 mRNA, complete cds
          Length = 1819

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 690  tgcaagatactcatcatcctgctg 713
            ||||||||||||||||||||||||
Sbjct: 1263 tgcaagatactcatcatcctgctg 1240
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>gb|AY142615.1| Arabidopsis thaliana unknown protein (At4g23040) mRNA, complete cds
          Length = 1609

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 690  tgcaagatactcatcatcctgctg 713
            ||||||||||||||||||||||||
Sbjct: 1143 tgcaagatactcatcatcctgctg 1120
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>gb|AF360264.1| Arabidopsis thaliana unknown protein (At4g23040) mRNA, complete cds
          Length = 1832

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 690  tgcaagatactcatcatcctgctg 713
            ||||||||||||||||||||||||
Sbjct: 1260 tgcaagatactcatcatcctgctg 1237
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>emb|BX828365.1|CNS0A3YR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH80ZE07 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1783

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 690  tgcaagatactcatcatcctgctg 713
            ||||||||||||||||||||||||
Sbjct: 1263 tgcaagatactcatcatcctgctg 1240
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>gb|AY105821.1| Zea mays PCO142874 mRNA sequence
          Length = 1396

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 655  gccttcaactctttttctctatcagcttggagagctgcaagatactcatcatcctgctgc 714
            ||||| ||| | ||||||  ||||||||| || | |||||| |||||||| |||||||||
Sbjct: 1391 gcctttaacnccttttcttgatcagcttgtagcgatgcaaggtactcatcgtcctgctgc 1332

              
Query: 715  tc 716
            ||
Sbjct: 1331 tc 1330
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 383      tgaaatcaaacagaacctggagctgg 408
                |||||||||||||||||| |||||||
Sbjct: 31946043 tgaaatcaaacagaaccttgagctgg 31946018
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>emb|AL161558.2|ATCHRIV58 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 58
          Length = 193550

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 690    tgcaagatactcatcatcctgc 711
              ||||||||||||||||||||||
Sbjct: 118590 tgcaagatactcatcatcctgc 118611
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>emb|AL031018.1|ATF7H19 Arabidopsis thaliana DNA chromosome 4, BAC clone F7H19 (ESSA project)
          Length = 139316

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 690   tgcaagatactcatcatcctgc 711
             ||||||||||||||||||||||
Sbjct: 89503 tgcaagatactcatcatcctgc 89524
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>gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete
             sequence
          Length = 144306

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 383   tgaaatcaaacagaacctggagctgg 408
             |||||||||||||||||| |||||||
Sbjct: 37995 tgaaatcaaacagaaccttgagctgg 37970
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>gb|AC008541.6| Homo sapiens chromosome 5 clone CTC-498M5, complete sequence
          Length = 148043

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 167    gatagaagtaaaaaaggtatga 188
              ||||||||||||||||||||||
Sbjct: 124909 gatagaagtaaaaaaggtatga 124888
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>gb|AC106767.2| Homo sapiens chromosome 5 clone RP11-269M17, complete sequence
          Length = 143792

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 167   gatagaagtaaaaaaggtatga 188
             ||||||||||||||||||||||
Sbjct: 26203 gatagaagtaaaaaaggtatga 26182
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>ref|XM_680738.1| PREDICTED: Danio rerio similar to keratin 17n (LOC557644), mRNA
          Length = 1461

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 387  atcaaacagaacctggagctgg 408
            ||||||||||||||||||||||
Sbjct: 1396 atcaaacagaacctggagctgg 1417
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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 601     gcagcttctcttgcagcagcttcttc 626
               ||||||||| ||||||||||||||||
Sbjct: 1581585 gcagcttctgttgcagcagcttcttc 1581560
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 383      tgaaatcaaacagaacctggagctgg 408
                |||||||||||||||||| |||||||
Sbjct: 32036555 tgaaatcaaacagaaccttgagctgg 32036530
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>gb|AF137263.1|AF137263 Bacteroides thetaiotaomicron 30S ribosomal protein S16-like protein,
            fucose gene cluster, and RNA polymerase sigma factor
            SigZ-like protein (sigZ) genes, complete cds
          Length = 10671

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 601  gcagcttctcttgcagcagcttcttc 626
            ||||||||| ||||||||||||||||
Sbjct: 1232 gcagcttctgttgcagcagcttcttc 1207
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>emb|BX255921.2| Zebrafish DNA sequence from clone CH211-236K19 in linkage group 5,
             complete sequence
          Length = 142918

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 387   atcaaacagaacctggagctgg 408
             ||||||||||||||||||||||
Sbjct: 77908 atcaaacagaacctggagctgg 77887
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>gb|AC091494.9| Oryza sativa chromosome 3 BAC OSJNBa0070N04 genomic sequence, complete
              sequence
          Length = 150663

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 383    tgaaatcaaacagaacctggagctgg 408
              |||||||||||||||||| |||||||
Sbjct: 147292 tgaaatcaaacagaaccttgagctgg 147267
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>gb|DQ021478.1| Danio rerio Rad52 short isoform (Rad52) mRNA, complete cds,
           alternatively spliced
          Length = 1248

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 cttctcttgcagcagcttctt 625
           |||||||||||||||||||||
Sbjct: 955 cttctcttgcagcagcttctt 935
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>gb|DQ021477.1| Danio rerio Rad52 long isoform (Rad52) mRNA, complete cds,
           alternatively spliced
          Length = 1323

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 cttctcttgcagcagcttctt 625
           |||||||||||||||||||||
Sbjct: 955 cttctcttgcagcagcttctt 935
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>gb|BC098627.1| Danio rerio RAD52 homolog (S. cerevisiae), mRNA (cDNA clone
           MGC:112400 IMAGE:7399486), complete cds
          Length = 1511

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 cttctcttgcagcagcttctt 625
           |||||||||||||||||||||
Sbjct: 952 cttctcttgcagcagcttctt 932
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>ref|NM_001024451.1| Danio rerio RAD52 homolog (S. cerevisiae) (rad52), mRNA
          Length = 1248

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 605 cttctcttgcagcagcttctt 625
           |||||||||||||||||||||
Sbjct: 955 cttctcttgcagcagcttctt 935
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>emb|AL732604.5| Human DNA sequence from clone RP11-27G9 on chromosome X Contains a SET
              translocation (myeloid leukemia-associated) (SET)
              pseudogene, complete sequence
          Length = 166517

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 237    aatttgttctagaaacaaggc 257
              |||||||||||||||||||||
Sbjct: 116724 aatttgttctagaaacaaggc 116704
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>emb|AL391416.9| Human DNA sequence from clone RP11-378G13 on chromosome 6, complete
            sequence
          Length = 125378

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 552  aagttgcttcctcagcttttc 572
            |||||||||||||||||||||
Sbjct: 6521 aagttgcttcctcagcttttc 6501
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>emb|AL390835.14| Human DNA sequence from clone RP5-1119O21 on chromosome 10 Contains the
             5' end of a novel gene and a novel gene, complete sequence
          Length = 65508

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 580   ttttgcttttccatttcaatt 600
             |||||||||||||||||||||
Sbjct: 12769 ttttgcttttccatttcaatt 12749
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>gb|AC164311.4| Mus musculus BAC clone RP23-144H18 from chromosome 8, complete sequence
          Length = 190693

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 392   acagaacctggagctggtcag 412
             |||||||||||||||||||||
Sbjct: 71711 acagaacctggagctggtcag 71691
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>emb|BX546452.9| Zebrafish DNA sequence from clone DKEYP-8B11 in linkage group 25,
              complete sequence
          Length = 170113

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 605    cttctcttgcagcagcttctt 625
              |||||||||||||||||||||
Sbjct: 169547 cttctcttgcagcagcttctt 169527
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>gb|AC102462.19| Mus musculus chromosome 1, clone RP24-327F2, complete sequence
          Length = 141794

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 540   ctcctcttcctcaagttgctt 560
             |||||||||||||||||||||
Sbjct: 55033 ctcctcttcctcaagttgctt 55013
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>emb|CR354611.10| Zebrafish DNA sequence from clone CH211-249B21 in linkage group 25,
             complete sequence
          Length = 81016

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 605   cttctcttgcagcagcttctt 625
             |||||||||||||||||||||
Sbjct: 79583 cttctcttgcagcagcttctt 79603
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>emb|BX004889.8| Zebrafish DNA sequence from clone DKEY-65P15 in linkage group 25,
              complete sequence
          Length = 253422

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 605    cttctcttgcagcagcttctt 625
              |||||||||||||||||||||
Sbjct: 181799 cttctcttgcagcagcttctt 181779
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>gb|AC141646.4| Mus musculus BAC clone RP23-84E4 from chromosome 9, complete sequence
          Length = 193235

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 614    cagcagcttcttctaatctac 634
              |||||||||||||||||||||
Sbjct: 130464 cagcagcttcttctaatctac 130444


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,536,502
Number of Sequences: 3902068
Number of extensions: 7536502
Number of successful extensions: 154100
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 153796
Number of HSP's gapped (non-prelim): 301
length of query: 736
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 713
effective length of database: 17,143,297,704
effective search space: 12223171262952
effective search space used: 12223171262952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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