ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags8k07 |
|---|---|
| Clone Library Name | barley_pub |
>RPF1_MOUSE (Q7TND5) Ribosome production factor 1 (Ribosome biogenesis protein| RPF1) (Brix domain-containing protein 5) Length = 349 Score = 129 bits (323), Expect = 5e-30 Identities = 68/115 (59%), Positives = 78/115 (67%), Gaps = 1/115 (0%) Frame = -1 Query: 487 LGHRVGRMIQSLFPQDPXFRGRRVVTFHNQRDYIFFRHRRYIFXEKEXKIVSKDKKSKGE 308 LGH +GRM SLFP +P F GR+V TFHNQRDYIFFR RYIF Sbjct: 255 LGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIF----------------- 297 Query: 307 TKTEKQVNCRLQECGPRFTLKLLXLQHGTFDTKSGEYEWVHKP-DLDTSRRRFFL 146 K+EK+V +QE GPRFTLKL LQ GTFD+K GEYEWVHKP ++DTSRR+F L Sbjct: 298 -KSEKKVG--IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>RPF1_PONPY (Q5R631) Ribosome production factor 1 (Ribosome biogenesis protein| RPF1) (Brix domain-containing protein 5) Length = 349 Score = 127 bits (320), Expect = 1e-29 Identities = 67/115 (58%), Positives = 78/115 (67%), Gaps = 1/115 (0%) Frame = -1 Query: 487 LGHRVGRMIQSLFPQDPXFRGRRVVTFHNQRDYIFFRHRRYIFXEKEXKIVSKDKKSKGE 308 LGH +GRM SLFP +P F GR+V TFHNQRDYIFFR RYIF Sbjct: 255 LGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIF----------------- 297 Query: 307 TKTEKQVNCRLQECGPRFTLKLLXLQHGTFDTKSGEYEWVHKP-DLDTSRRRFFL 146 ++EK+V +QE GPRFTLKL LQ GTFD+K GEYEWVHKP ++DTSRR+F L Sbjct: 298 -RSEKKVG--IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>RPF1_HUMAN (Q9H9Y2) Ribosome production factor 1 (Ribosome biogenesis protein| RPF1) (Brix domain-containing protein 5) Length = 349 Score = 127 bits (320), Expect = 1e-29 Identities = 67/115 (58%), Positives = 78/115 (67%), Gaps = 1/115 (0%) Frame = -1 Query: 487 LGHRVGRMIQSLFPQDPXFRGRRVVTFHNQRDYIFFRHRRYIFXEKEXKIVSKDKKSKGE 308 LGH +GRM SLFP +P F GR+V TFHNQRDYIFFR RYIF Sbjct: 255 LGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIF----------------- 297 Query: 307 TKTEKQVNCRLQECGPRFTLKLLXLQHGTFDTKSGEYEWVHKP-DLDTSRRRFFL 146 ++EK+V +QE GPRFTLKL LQ GTFD+K GEYEWVHKP ++DTSRR+F L Sbjct: 298 -RSEKKVG--IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL 349
>RPF1_XENLA (Q8AVP1) Ribosome production factor 1 (Ribosome biogenesis protein| RPF1) (Brix domain-containing protein 5) Length = 343 Score = 126 bits (317), Expect = 3e-29 Identities = 66/115 (57%), Positives = 78/115 (67%), Gaps = 1/115 (0%) Frame = -1 Query: 487 LGHRVGRMIQSLFPQDPXFRGRRVVTFHNQRDYIFFRHRRYIFXEKEXKIVSKDKKSKGE 308 LGH +GRM SL+P DP F GR+V TFHNQRDYIFFR+ RY+F Sbjct: 249 LGHSIGRMFASLYPHDPHFVGRQVATFHNQRDYIFFRYHRYLF----------------- 291 Query: 307 TKTEKQVNCRLQECGPRFTLKLLXLQHGTFDTKSGEYEWVHK-PDLDTSRRRFFL 146 K+EK+V +QE GPRFTLKL LQ GTFD+K GEYEWVHK ++DTSRR+F L Sbjct: 292 -KSEKKVG--IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKRHEMDTSRRKFHL 343
>RPF1_BRARE (Q6IQU6) Ribosome production factor 1 (Ribosome biogenesis protein| RPF1) (Brix domain-containing protein 5) Length = 330 Score = 121 bits (304), Expect = 9e-28 Identities = 64/115 (55%), Positives = 76/115 (66%), Gaps = 1/115 (0%) Frame = -1 Query: 487 LGHRVGRMIQSLFPQDPXFRGRRVVTFHNQRDYIFFRHRRYIFXEKEXKIVSKDKKSKGE 308 LGH +GR+ +LFP DP F GR+V TFHNQRD+IFFR RYIF Sbjct: 236 LGHSIGRLFAALFPHDPQFVGRQVATFHNQRDFIFFRFHRYIF----------------- 278 Query: 307 TKTEKQVNCRLQECGPRFTLKLLXLQHGTFDTKSGEYEWVHK-PDLDTSRRRFFL 146 K EK+V +QE GPRFTLKL LQ GTFD+K GEYEWVHK ++D+SRR+F L Sbjct: 279 -KNEKKVG--IQELGPRFTLKLRSLQKGTFDSKFGEYEWVHKRHEMDSSRRKFHL 330
>YUY1_CAEEL (P54073) Hypothetical protein F44G4.1 in chromosome II| Length = 384 Score = 118 bits (296), Expect = 7e-27 Identities = 63/115 (54%), Positives = 72/115 (62%), Gaps = 1/115 (0%) Frame = -1 Query: 487 LGHRVGRMIQSLFPQDPXFRGRRVVTFHNQRDYIFFRHRRYIFXEKEXKIVSKDKKSKGE 308 LGH + RM+ LFP DP F GRRVVTFHNQRDYIFFRH RY F ++ K Sbjct: 289 LGHNIARMLACLFPHDPKFTGRRVVTFHNQRDYIFFRHHRYEFKKEGSK----------- 337 Query: 307 TKTEKQVNCRLQECGPRFTLKLLXLQHGTFDTKSGEYEWVHK-PDLDTSRRRFFL 146 L E GPRFTL+L LQ GTFD K GE+EWV K +++TSRRRFFL Sbjct: 338 --------AALLELGPRFTLRLKWLQKGTFDAKWGEFEWVLKRHEMETSRRRFFL 384
>RPF1_RAT (Q5RJS9) Ribosome production factor 1 (Ribosome biogenesis protein| RPF1) (Brix domain-containing protein 5) Length = 345 Score = 115 bits (288), Expect = 6e-26 Identities = 60/102 (58%), Positives = 67/102 (65%) Frame = -1 Query: 487 LGHRVGRMIQSLFPQDPXFRGRRVVTFHNQRDYIFFRHRRYIFXEKEXKIVSKDKKSKGE 308 LGH +GRM SLFP +P F GR+V TFHNQRDYIFFR RYIF Sbjct: 255 LGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIF----------------- 297 Query: 307 TKTEKQVNCRLQECGPRFTLKLLXLQHGTFDTKSGEYEWVHK 182 K+EK+V +QE GPRFTLKL LQ GTFD+K GEYEWVHK Sbjct: 298 -KSEKKVG--IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHK 336
>RPF1_DROME (Q9VKB4) Probable ribosome production factor 1 (Ribosome biogenesis| protein RPF1) Length = 394 Score = 114 bits (284), Expect = 2e-25 Identities = 64/116 (55%), Positives = 74/116 (63%), Gaps = 2/116 (1%) Frame = -1 Query: 487 LGHRVGRMIQSLFPQDPXFRGRRVVTFHNQRDYIFFRHRRYIFXEKEXKIVSKDKKSKGE 308 LG VGRM+ +LF DP FRGRR VTFHNQRDYIFFRH RY F Sbjct: 298 LGLTVGRMLGALFHHDPEFRGRRAVTFHNQRDYIFFRHHRYEF----------------- 340 Query: 307 TKTEKQVNCRLQECGPRFTLKLLXLQHGTFDTKSGEYEWV--HKPDLDTSRRRFFL 146 TK K+V +L+E GPRFTLKL LQ GTFD+K+G+Y W+ +K SRRRFFL Sbjct: 341 TKEGKRV--KLRELGPRFTLKLRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFFL 394
>RPF1_YEAST (P38805) Ribosome production factor 1 (Ribosome biogenesis protein| RPF1) Length = 295 Score = 98.2 bits (243), Expect = 1e-20 Identities = 52/114 (45%), Positives = 67/114 (58%) Frame = -1 Query: 487 LGHRVGRMIQSLFPQDPXFRGRRVVTFHNQRDYIFFRHRRYIFXEKEXKIVSKDKKSKGE 308 LG VGR+ QS+ PQ+P GR+V+T HNQRDYIFFR RY+F KD + G Sbjct: 206 LGQTVGRLFQSILPQNPDIEGRQVITLHNQRDYIFFRRHRYVF---------KDNERVG- 255 Query: 307 TKTEKQVNCRLQECGPRFTLKLLXLQHGTFDTKSGEYEWVHKPDLDTSRRRFFL 146 LQE GP+FTLKL LQ G + E EW HKP++D +++F+L Sbjct: 256 ----------LQELGPQFTLKLKRLQRGIKE----ETEWEHKPEMDKEKKKFYL 295
>YDS4_SCHPO (O14180) Hypothetical protein C4F8.04 in chromosome I| Length = 306 Score = 82.4 bits (202), Expect = 6e-16 Identities = 46/114 (40%), Positives = 61/114 (53%) Frame = -1 Query: 487 LGHRVGRMIQSLFPQDPXFRGRRVVTFHNQRDYIFFRHRRYIFXEKEXKIVSKDKKSKGE 308 LG V R QSLF Q P +GR+VVT H QRD++FFR RY F EK Sbjct: 207 LGMTVARAFQSLFIQTPQIQGRQVVTIHCQRDFLFFRRHRYAFREK-------------- 252 Query: 307 TKTEKQVNCRLQECGPRFTLKLLXLQHGTFDTKSGEYEWVHKPDLDTSRRRFFL 146 + + LQE GPRFT++L +Q G +D K GE + ++ RR+F+L Sbjct: 253 SNMPDGIGTGLQELGPRFTMRLRMVQKGVWDRKEGEVFFESNAGEESDRRKFWL 306
>YHPK_CAEEL (O62518) Hypothetical protein ZK795.3 in chromosome IV| Length = 292 Score = 64.7 bits (156), Expect = 1e-10 Identities = 42/115 (36%), Positives = 56/115 (48%), Gaps = 1/115 (0%) Frame = -1 Query: 487 LGHRVGRMIQSLFPQDPXFRGRRVVTFHNQRDYIFFRHRRYIFXEKEXKIVSKDKKSKGE 308 LGHR +++ LFP P +R++TF N DYI FRH Y Sbjct: 190 LGHRFTTILKHLFPV-PKPDSKRIITFSNSEDYISFRHHVY------------------- 229 Query: 307 TKTEKQVNCRLQECGPRFTLKLLXLQHGTFDT-KSGEYEWVHKPDLDTSRRRFFL 146 KTE L E GPRF LK ++ GT +T + E EWV + +T+R+R FL Sbjct: 230 -KTENDGEVELTEAGPRFELKPYQIKLGTLETLAAAEDEWVLRSYTNTARKRTFL 283
>IMP4_RAT (Q5PQR5) U3 small nucleolar ribonucleoprotein protein IMP4 (U3| snoRNP protein IMP4) Length = 291 Score = 62.0 bits (149), Expect = 8e-10 Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 1/115 (0%) Frame = -1 Query: 487 LGHRVGRMIQSLFPQDPXFRGRRVVTFHNQRDYIFFRHRRYIFXEKEXKIVSKDKKSKGE 308 LG RV +++ LFP P RV+TF NQ DYI FRH Y Sbjct: 195 LGKRVSDILRYLFPV-PKDDSHRVITFANQDDYISFRHHVY------------------- 234 Query: 307 TKTEKQVNCRLQECGPRFTLKLLXLQHGTFDTK-SGEYEWVHKPDLDTSRRRFFL 146 KT+ + N L E GPRF LKL ++ GT + + + + EW P +T+R+R FL Sbjct: 235 KKTDHR-NVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>IMP4_PONPY (Q5R947) U3 small nucleolar ribonucleoprotein protein IMP4 (U3| snoRNP protein IMP4) Length = 291 Score = 62.0 bits (149), Expect = 8e-10 Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 1/115 (0%) Frame = -1 Query: 487 LGHRVGRMIQSLFPQDPXFRGRRVVTFHNQRDYIFFRHRRYIFXEKEXKIVSKDKKSKGE 308 LG RV +++ LFP P RV+TF NQ DYI FRH Y Sbjct: 195 LGKRVSDILRYLFPV-PKDDSHRVITFANQDDYISFRHHVY------------------- 234 Query: 307 TKTEKQVNCRLQECGPRFTLKLLXLQHGTFDTK-SGEYEWVHKPDLDTSRRRFFL 146 KT+ + N L E GPRF LKL ++ GT + + + + EW P +T+R+R FL Sbjct: 235 KKTDHR-NVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>IMP4_MOUSE (Q8VHZ7) U3 small nucleolar ribonucleoprotein protein IMP4 (U3| snoRNP protein IMP4) Length = 291 Score = 62.0 bits (149), Expect = 8e-10 Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 1/115 (0%) Frame = -1 Query: 487 LGHRVGRMIQSLFPQDPXFRGRRVVTFHNQRDYIFFRHRRYIFXEKEXKIVSKDKKSKGE 308 LG RV +++ LFP P RV+TF NQ DYI FRH Y Sbjct: 195 LGKRVSDILRYLFPV-PKDDSHRVITFANQDDYISFRHHVY------------------- 234 Query: 307 TKTEKQVNCRLQECGPRFTLKLLXLQHGTFDTK-SGEYEWVHKPDLDTSRRRFFL 146 KT+ + N L E GPRF LKL ++ GT + + + + EW P +T+R+R FL Sbjct: 235 KKTDHR-NVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>IMP4_HUMAN (Q96G21) U3 small nucleolar ribonucleoprotein protein IMP4 (U3| snoRNP protein IMP4) (Brix domain-containing protein 4) Length = 291 Score = 62.0 bits (149), Expect = 8e-10 Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 1/115 (0%) Frame = -1 Query: 487 LGHRVGRMIQSLFPQDPXFRGRRVVTFHNQRDYIFFRHRRYIFXEKEXKIVSKDKKSKGE 308 LG RV +++ LFP P RV+TF NQ DYI FRH Y Sbjct: 195 LGKRVSDILRYLFPV-PKDDSHRVITFANQDDYISFRHHVY------------------- 234 Query: 307 TKTEKQVNCRLQECGPRFTLKLLXLQHGTFDTK-SGEYEWVHKPDLDTSRRRFFL 146 KT+ + N L E GPRF LKL ++ GT + + + + EW P +T+R+R FL Sbjct: 235 KKTDHR-NVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288
>IMP4_SCHPO (O13823) U3 small nucleolar ribonucleoprotein protein imp4 (U3| snoRNP protein imp4) Length = 289 Score = 58.9 bits (141), Expect = 7e-09 Identities = 41/104 (39%), Positives = 47/104 (45%), Gaps = 1/104 (0%) Frame = -1 Query: 487 LGHRVGRMIQSLFPQDPXFRGRRVVTFHNQRDYIFFRHRRYIFXEKEXKIVSKDKKSKGE 308 LG RV + +LFP DP RVVTF N DYI FRH Y Sbjct: 196 LGKRVKTALSALFPPDPKDTTPRVVTFANTDDYISFRHHIY------------------- 236 Query: 307 TKT-EKQVNCRLQECGPRFTLKLLXLQHGTFDTKSGEYEWVHKP 179 KT KQ+ L E GPRF +KL + GT D + EW KP Sbjct: 237 AKTGPKQI--ILSEAGPRFEMKLFEITLGTVDMVDADVEWKLKP 278
>IMP4_DEBHA (Q6BYD9) U3 small nucleolar ribonucleoprotein protein IMP4 (U3| snoRNP protein IMP4) Length = 284 Score = 56.2 bits (134), Expect = 4e-08 Identities = 37/114 (32%), Positives = 52/114 (45%) Frame = -1 Query: 487 LGHRVGRMIQSLFPQDPXFRGRRVVTFHNQRDYIFFRHRRYIFXEKEXKIVSKDKKSKGE 308 LG RV ++++ LFP RV+TF N D+I RH Y+ Sbjct: 191 LGKRVVKIMKHLFPPGVKKDSSRVITFINNDDFISVRHHMYV------------------ 232 Query: 307 TKTEKQVNCRLQECGPRFTLKLLXLQHGTFDTKSGEYEWVHKPDLDTSRRRFFL 146 KT+ V L E GPRF ++L L+ G D K E EW + + T R+ +L Sbjct: 233 -KTKDTVE--LSEVGPRFEMRLYELRLGLLDNKDSEVEWQLRRFIRTGNRKNYL 283
>IMP4_CANGA (Q6FNN7) U3 small nucleolar ribonucleoprotein protein IMP4 (U3| snoRNP protein IMP4) Length = 288 Score = 54.7 bits (130), Expect = 1e-07 Identities = 34/114 (29%), Positives = 56/114 (49%) Frame = -1 Query: 487 LGHRVGRMIQSLFPQDPXFRGRRVVTFHNQRDYIFFRHRRYIFXEKEXKIVSKDKKSKGE 308 LG+RV ++++LFP P RV+TF N+ D+I R Y+ Sbjct: 196 LGNRVVTILKNLFPPGPKKDSSRVITFANRGDFISVRQHVYV------------------ 237 Query: 307 TKTEKQVNCRLQECGPRFTLKLLXLQHGTFDTKSGEYEWVHKPDLDTSRRRFFL 146 +T+ V + E GPRF ++L L+ GT + K + EW + + T+ R+ +L Sbjct: 238 -RTKDGV--EMAEVGPRFEMRLFELRLGTLENKDADVEWQLRRFVRTANRKDYL 288
>IMP4_ASHGO (Q755T8) U3 small nucleolar ribonucleoprotein protein IMP4 (U3| snoRNP protein IMP4) Length = 283 Score = 51.6 bits (122), Expect = 1e-06 Identities = 35/114 (30%), Positives = 52/114 (45%) Frame = -1 Query: 487 LGHRVGRMIQSLFPQDPXFRGRRVVTFHNQRDYIFFRHRRYIFXEKEXKIVSKDKKSKGE 308 LG RV ++++ +FP RV+TF N+ D+I R Y+ Sbjct: 191 LGQRVVKILKHMFPPGVKRDSPRVITFANRGDFISVRQHVYV------------------ 232 Query: 307 TKTEKQVNCRLQECGPRFTLKLLXLQHGTFDTKSGEYEWVHKPDLDTSRRRFFL 146 KT V L E GPRF +KL L GT + K + EW + + T+ R+ +L Sbjct: 233 -KTRDGVE--LAEVGPRFEMKLYELTLGTLENKDADVEWQLRRFVRTANRKDYL 283
>IMP4_YARLI (Q6C804) U3 small nucleolar ribonucleoprotein protein IMP4 (U3| snoRNP protein IMP4) Length = 283 Score = 50.4 bits (119), Expect = 2e-06 Identities = 34/114 (29%), Positives = 53/114 (46%) Frame = -1 Query: 487 LGHRVGRMIQSLFPQDPXFRGRRVVTFHNQRDYIFFRHRRYIFXEKEXKIVSKDKKSKGE 308 LG RV ++++ LFP RV+TF N+ D+I R Y+ Sbjct: 191 LGKRVVQILKHLFPPGVKKDSARVITFANRGDFISVRQHVYV------------------ 232 Query: 307 TKTEKQVNCRLQECGPRFTLKLLXLQHGTFDTKSGEYEWVHKPDLDTSRRRFFL 146 KT + V L E GPRF ++L L+ GT + K + EW + T+ ++ +L Sbjct: 233 -KTREGVE--LAEVGPRFEMRLYDLRLGTLENKDADVEWRMHGFMRTANKKDYL 283
>IMP4_YEAST (P53941) U3 small nucleolar ribonucleoprotein protein IMP4 (U3| snoRNP protein IMP4) Length = 290 Score = 48.9 bits (115), Expect = 7e-06 Identities = 31/114 (27%), Positives = 51/114 (44%) Frame = -1 Query: 487 LGHRVGRMIQSLFPQDPXFRGRRVVTFHNQRDYIFFRHRRYIFXEKEXKIVSKDKKSKGE 308 LG RV +++ LF P RV+TF N+ D+I R Y+ + +I Sbjct: 198 LGKRVVCILKHLFNAGPKKDSERVITFANRGDFISVRQHVYVRTREGVEIA--------- 248 Query: 307 TKTEKQVNCRLQECGPRFTLKLLXLQHGTFDTKSGEYEWVHKPDLDTSRRRFFL 146 E GPRF ++L L+ GT + K + EW + + T+ ++ +L Sbjct: 249 ------------EVGPRFEMRLFELRLGTLENKDADVEWQLRRFIRTANKKDYL 290
>SSF2_YEAST (Q12153) Ribosome biogenesis protein SSF2| Length = 453 Score = 35.4 bits (80), Expect = 0.081 Identities = 19/58 (32%), Positives = 31/58 (53%) Frame = -1 Query: 355 EKEXKIVSKDKKSKGETKTEKQVNCRLQECGPRFTLKLLXLQHGTFDTKSGEYEWVHK 182 E+E + + K S+ T ++ +L E GPR TLKL+ ++ G K +E+V K Sbjct: 302 EEEDVEMEEPKPSENSQPTPRKKAIKLTELGPRLTLKLVKIEDGICSGKVLHHEFVQK 359
>SSF1_YEAST (P38789) Ribosome biogenesis protein SSF1| Length = 453 Score = 34.7 bits (78), Expect = 0.14 Identities = 19/58 (32%), Positives = 31/58 (53%) Frame = -1 Query: 355 EKEXKIVSKDKKSKGETKTEKQVNCRLQECGPRFTLKLLXLQHGTFDTKSGEYEWVHK 182 E+E + + K S+ T ++ +L E GPR TLKL+ ++ G K +E+V K Sbjct: 302 EEEDVEMEEPKPSENLQPTPRKKAIKLTELGPRLTLKLVKIEEGICSGKVLHHEFVQK 359
>SSF1_MOUSE (Q91YU8) Suppressor of SWI4 1 homolog (Ssf-1) (Peter Pan homolog)| Length = 470 Score = 30.4 bits (67), Expect = 2.6 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -1 Query: 295 KQVNCRLQECGPRFTLKLLXLQHGTFDTKSGEYEWVHKPD 176 +Q RL E GPR TL+L+ +Q G + + +VHK + Sbjct: 266 QQSAVRLTEIGPRMTLQLIKIQEGVGNGNVLFHSFVHKTE 305
>G6PD5_ARATH (Q9LK23) Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 1| (EC 1.1.1.49) (G6PD5) (G6PDH5) Length = 516 Score = 29.3 bits (64), Expect = 5.8 Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 11/97 (11%) Frame = -1 Query: 367 YIFXEKEXKIVSKDKKSK--GETKTEKQVNCRLQECGPRFTLKLLXLQHGTFDTKSG--- 203 +IF KI ++ + K G EK + + E +F LKL+ G +D++ G Sbjct: 67 HIFGYARSKITDEELRDKIRGYLVDEKNAS-KKTEALSKF-LKLIKYVSGPYDSEEGFKR 124 Query: 202 ------EYEWVHKPDLDTSRRRFFL*FGPVLYPHTRK 110 E+E K +SRR F+L P +YP K Sbjct: 125 LDKAILEHEISKKTAEGSSRRLFYLALPPSVYPPVSK 161
>PXK_HUMAN (Q7Z7A4) PX domain-containing protein kinase-like protein| (Modulator of Na,K-ATPase) (MONaKA) Length = 578 Score = 28.9 bits (63), Expect = 7.6 Identities = 16/64 (25%), Positives = 30/64 (46%) Frame = -2 Query: 369 GTSXRRKKXKLFQRTRNRRVKPKPRSK*TVAFRNAALAXXXXXXXCNTGPSTRKAGSTSG 190 G+ RKK K+ R +++R + + + + N+ + T PS+ STSG Sbjct: 451 GSEEERKKRKILARKKSKRSALENSEEHSAKYSNSNNSAGSGASSPLTSPSSPTPPSTSG 510 Query: 189 FTSL 178 ++L Sbjct: 511 ISAL 514
>Y330_BUCBP (Q89AG4) UPF0176 protein bbp_330| Length = 312 Score = 28.5 bits (62), Expect = 9.9 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Frame = -1 Query: 382 FRHRRYIFXEKEXKIVSKDKKSK---GETKTEKQVNCRLQEC 266 FR + ++F E+ ++VSKD SK E + VNC C Sbjct: 243 FRGKNFVFDERMSEVVSKDVLSKCDQCENLCDTYVNCFNSRC 284
>POLN_SPDV (Q8JJX1) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC 3.6.1.1 Length = 2601 Score = 28.5 bits (62), Expect = 9.9 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = +1 Query: 340 FXFLSPXRCTCDDGRIYSLAGYGRSQL-VGXGNXGLEGKEIVSSSQHDD 483 F F++P + TC + S GY ++ + G G+ KE +++S H D Sbjct: 280 FHFVAPNKYTCRCDTVVSCGGYVVKKITICEGIVGIPAKEELATSYHRD 328 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,643,216 Number of Sequences: 219361 Number of extensions: 1271646 Number of successful extensions: 3062 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 2927 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3034 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
