>YK25_YEAST (P36138) Hypothetical 21.1 kDa protein in GAP1-NAP1 intergenic|
           region
          Length = 191

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 216 RSLXTNYKALPXPPPHSLVDRSRVXDPXHSTXYTXHXP 329
           R+  TN   L  PP  S++DRSR   P +++  T   P
Sbjct: 155 RTFETNSSVLAIPP-QSILDRSRTLPPSNASNTTTRRP 191

>SIM1_MOUSE (Q61045) Single-minded homolog 1 (mSIM1)|
          Length = 765

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 33  LQRQLVNLSAQKPTVKYTTAKSTTVIXKRNTTK 131
           LQ  L  +SA KPT  YT++ + T+   R   K
Sbjct: 340 LQLSLDQISASKPTFSYTSSSTPTISDNRKGAK 372

>GRIN1_MOUSE (Q3UNH4) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)|
          Length = 932

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 216 RSLXTNYKALPXPPPHSLVDRSRVXDPXHST 308
           R   ++ KA+P PP H+L D+S   DP H++
Sbjct: 2   RDCCSSPKAIPAPPRHAL-DQSLGMDPRHTS 31


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,898,659
Number of Sequences: 219361
Number of extensions: 428232
Number of successful extensions: 979
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 80,573,946
effective HSP length: 95
effective length of database: 59,734,651
effective search space used: 1433631624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)