ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags8i21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 98 2e-17
2dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 98 2e-17
3gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome... 98 2e-17
4gb|AC007834.40| Homo sapiens 12 BAC RP11-7G5 (Roswell Park Cance... 48 0.020
5dbj|AP006419.1| Lotus japonicus genomic DNA, chromosome 4, clone... 46 0.077
6gb|AC158576.3| Mus musculus chromosome 7, clone RP24-252B21, com... 44 0.31
7gb|AC116484.12| Mus musculus chromosome 16, clone RP23-425F12, c... 44 0.31
8gb|AC099701.4| Mus musculus chromosome 7, clone RP23-184F6, comp... 44 0.31
9gb|AC123738.8| Mus musculus, clone RP24-67N17, complete sequence 42 1.2
10gb|AC154577.2| Mus musculus BAC clone RP23-375G9 from chromosome... 42 1.2
11ref|NM_001008838.1| Rattus norvegicus RT1 class I, CE15 (RT1-CE1... 42 1.2
12emb|BX883047.1| Rattus norvegicus chromosome 20, major histocomp... 42 1.2
13gb|AC104447.2| Homo sapiens chromosome 3 clone RP11-447D11, comp... 42 1.2
14gb|AC161378.2| Mus musculus BAC clone RP23-202A6 from chromosome... 42 1.2
15gb|AC154429.4| Mus musculus BAC clone RP24-202G18 from chromosom... 42 1.2
16ref|NM_031668.1| Rattus norvegicus MYB binding protein (P160) 1a... 42 1.2
17gb|U83590.1|RNU83590 Rattus norvegicus PAR interacting protein m... 42 1.2
18ref|XM_482158.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.8
19ref|XM_507218.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 4.8
20ref|XM_482157.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.8
21ref|NM_181369.2| Rattus norvegicus histidine rich calcium bindin... 40 4.8
22gb|AF109906.1|MMHC310M6 Mus musculus MHC class III region RD gen... 40 4.8
23gb|AC113099.12| Mus musculus chromosome 8, clone RP23-314N20, co... 40 4.8
24gb|AC135357.3| Mus musculus chromosome 8 clone RP24-84L15, compl... 40 4.8
25ref|XM_580440.2| PREDICTED: Bos taurus similar to zinc finger pr... 40 4.8
26ref|XM_415557.1| PREDICTED: Gallus gallus similar to Hypothetica... 40 4.8
27ref|XM_953034.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.8
28ref|XM_325786.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.8
29gb|AC164103.5| Mus musculus BAC clone RP23-427D2 from chromosome... 40 4.8
30ref|XM_545531.2| PREDICTED: Canis familiaris similar to Wiskott-... 40 4.8
31gb|AC107663.10| Mus musculus chromosome 13, clone RP23-99G9, com... 40 4.8
32gb|AC116392.12| Mus musculus chromosome 10, clone RP23-93D3, com... 40 4.8
33gb|AC139711.4| Mus musculus BAC clone RP23-362F21 from chromosom... 40 4.8
34emb|CR376756.10| Zebrafish DNA sequence from clone CH211-87A15 i... 40 4.8
35gb|AC126257.4| Mus musculus BAC clone RP24-247A8 from chromosome... 40 4.8
36gb|AC118020.11| Mus musculus, clone RP23-459B19, complete sequence 40 4.8
37gb|AC115122.4| Mus musculus BAC clone RP24-108L20 from chromosom... 40 4.8
38emb|CR361545.10| Zebrafish DNA sequence from clone DKEY-45K13 in... 40 4.8
39gb|AC108812.9| Mus musculus chromosome 18, clone RP23-417M2, com... 40 4.8
40gb|AC153529.7| Mus musculus 10 BAC RP23-239G23 (Roswell Park Can... 40 4.8
41gb|BC035024.1| Homo sapiens hypothetical protein AF447587, mRNA ... 40 4.8
42emb|AL360092.10| Human DNA sequence from clone RP11-113L23 on ch... 40 4.8
43ref|NM_145830.1| Mus musculus euchromatic histone lysine N-methy... 40 4.8
44ref|NM_147151.1| Mus musculus euchromatic histone lysine N-methy... 40 4.8
45gb|AC074281.20| Homo sapiens X BAC RP11-66N5 (Roswell Park Cance... 40 4.8
46emb|AL133274.8| Human DNA sequence from clone RP13-94P8 on chrom... 40 4.8
47gb|BC058357.1| Mus musculus euchromatic histone lysine N-methylt... 40 4.8
48emb|BX883051.1| Rattus norvegicus chromosome 20, major histocomp... 40 4.8
49ref|NM_203941.1| Xenopus tropicalis Dr1 associated protein 1 (ne... 40 4.8
50gb|AC153567.6| Mus musculus 10 BAC RP23-187C5 (Roswell Park Canc... 40 4.8
51emb|AL954353.14| Mouse DNA sequence from clone RP23-156D8 on chr... 40 4.8
52gb|AC087117.9| Mus Musculus Strain C57BL6/J chromosome 17 BAC, R... 40 4.8
53gb|AC113580.3| Tetraodon nigroviridis clone GSTNA-28E1, complete... 40 4.8
54dbj|AK125251.1| Homo sapiens cDNA FLJ43261 fis, clone HLUNG1000017 40 4.8
55tpg|BK005042.1| TPA: TPA_inf: Oryza sativa (indica cultivar-grou... 40 4.8
56gb|AF447587.1| Homo sapiens tissue-type testis unknown mRNA 40 4.8
57dbj|AK145712.1| Mus musculus blastocyst blastocyst cDNA, RIKEN f... 40 4.8
58dbj|AK154246.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 4.8
59gb|AF332093.1|AF332093 White spot syndrome virus, complete genome 40 4.8
60gb|AC153139.5| Mus musculus BAC clone RP23-411M4 from chromosome... 40 4.8
61gb|AC132139.4| Mus musculus BAC clone RP23-181A24 from chromosom... 40 4.8
62gb|AC156949.9| Mus musculus 10 BAC RP24-347J14 (Roswell Park Can... 40 4.8
63dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
64dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
65dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
66dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
67gb|AC113052.10| Mus musculus chromosome 5, clone RP23-250D22, co... 40 4.8
68gb|AC159114.7| Mus musculus BAC RP23-370L19 (Roswell Park Cance... 40 4.8
69gb|AF369029.2| White spot syndrome virus, complete genome 40 4.8
70gb|BC030348.1| Mus musculus, clone IMAGE:5006779, mRNA 40 4.8
71gb|AC115994.24| Homo sapiens chromosome 17, clone CTD-2535L24, c... 40 4.8
72gb|AC005840.2|AC005840 Homo sapiens complete sequence of a PAC c... 40 4.8
73ref|XM_216776.3| PREDICTED: Rattus norvegicus Dicer1, Dcr-1 homo... 40 4.8
74ref|XM_342577.2| PREDICTED: Rattus norvegicus similar to RIKEN c... 40 4.8
75emb|BX682551.5| Zebrafish DNA sequence from clone CH211-114M9 in... 40 4.8
76ref|NM_139170.2| Homo sapiens hypothetical protein AF447587 (LOC... 40 4.8
77gb|U75331.1|U75331 Gallus gallus bone morphogenetic protein 1 (B... 40 4.8
78dbj|AK196027.1| Mus musculus cDNA, clone:Y1G0120H08, strand:minu... 40 4.8
79dbj|AP003212.4| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
80dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
81emb|AL929407.16| Mouse DNA sequence from clone RP23-99C16 on chr... 40 4.8
82dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
83emb|BX648126.1|HSM808273 Homo sapiens mRNA; cDNA DKFZp686H2240 (... 40 4.8
84dbj|AP004689.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
85dbj|AK119593.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
86dbj|AK119576.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
87dbj|AK107047.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
88gb|AF440570.1| Shrimp white spot syndrome virus, complete genome 40 4.8
89gb|AC020663.1|AC020663 Homo sapiens chromosome 16 clone RPCI-11_... 40 4.8
90dbj|AK073889.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
91gb|AY277279.1| Rattus norvegicus histidine-rich calcium binding ... 40 4.8
92dbj|AK066775.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
93gb|AC153824.9| Mus musculus 10 BAC RP23-53D13 (Roswell Park Canc... 40 4.8
94gb|AC103935.10| Mus musculus chromosome 8, clone RP23-431O7, com... 40 4.8
95gb|BC097374.1| Rattus norvegicus ADP-ribosylation factor-like 6 ... 40 4.8
96gb|BC099769.1| Rattus norvegicus ADP-ribosylation factor-like 6 ... 40 4.8
97gb|AC100746.4| Mus musculus chromosome 5, clone RP24-399G21, com... 40 4.8
98emb|CT025759.14| Mouse DNA sequence from clone RP24-317H19 on ch... 40 4.8
99ref|NM_001025630.1| Rattus norvegicus ADP-ribosylation factor-li... 40 4.8
100emb|AL929586.19| Zebrafish DNA sequence from clone CH211-188I17,... 40 4.8
101gb|AC132327.3| Mus musculus BAC clone RP24-194O6 from 3, complet... 40 4.8
102gb|AC134862.4| Mus musculus BAC clone RP24-91P2 from 5, complete... 40 4.8
103gb|BC064181.1| Xenopus tropicalis Dr1 associated protein 1 (nega... 40 4.8
104gb|AC148978.3| Mus musculus BAC clone RP23-359K8 from 14, comple... 40 4.8
105gb|AC102518.11| Mus musculus chromosome 8, clone RP24-502J8, com... 40 4.8
106dbj|AB077210.1| Mus musculus mRNA for G9a long, complete cds 40 4.8
107dbj|AB077209.1| Mus musculus mRNA for G9a short, complete cds 40 4.8
108gb|AC171273.1| Mus musculus BAC clone RP23-137J12 from chromosom... 40 4.8
109emb|AL451076.14| Mouse DNA sequence from clone RP23-43O20 on chr... 40 4.8
110gb|AC159189.2| Mus musculus BAC clone RP24-159L17 from chromosom... 40 4.8
111emb|AL807801.3| Mouse DNA sequence from clone RP23-235A15 on chr... 40 4.8 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 74/82 (90%), Gaps = 2/82 (2%)
 Strand = Plus / Minus

                                                                           
Query: 144     aacaagggatgaagtttctccatatacgagcncacggnccaaaccatgtcaacgcagtga 203
               |||||||||||||||||||||||||| ||   || ||  |||||||||||||||||||||
Sbjct: 8059881 aacaagggatgaagtttctccatatatga--acatggatcaaaccatgtcaacgcagtga 8059824

                                     
Query: 204     cacacatcgcctcgatctttgt 225
               || |||||||||||||||||||
Sbjct: 8059823 catacatcgcctcgatctttgt 8059802
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 74/82 (90%), Gaps = 2/82 (2%)
 Strand = Plus / Minus

                                                                           
Query: 144     aacaagggatgaagtttctccatatacgagcncacggnccaaaccatgtcaacgcagtga 203
               |||||||||||||||||||||||||| ||   || ||  |||||||||||||||||||||
Sbjct: 8057716 aacaagggatgaagtttctccatatatga--acatggatcaaaccatgtcaacgcagtga 8057659

                                     
Query: 204     cacacatcgcctcgatctttgt 225
               || |||||||||||||||||||
Sbjct: 8057658 catacatcgcctcgatctttgt 8057637
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>gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0081I10,
              complete sequence
          Length = 143298

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 74/82 (90%), Gaps = 2/82 (2%)
 Strand = Plus / Minus

                                                                          
Query: 144    aacaagggatgaagtttctccatatacgagcncacggnccaaaccatgtcaacgcagtga 203
              |||||||||||||||||||||||||| ||   || ||  |||||||||||||||||||||
Sbjct: 127244 aacaagggatgaagtttctccatatatga--acatggatcaaaccatgtcaacgcagtga 127187

                                    
Query: 204    cacacatcgcctcgatctttgt 225
              || |||||||||||||||||||
Sbjct: 127186 catacatcgcctcgatctttgt 127165
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>gb|AC007834.40| Homo sapiens 12 BAC RP11-7G5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 210578

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 242   tcttcctnctcctcctcctcacagcct 268
             ||||||| |||||||||||||||||||
Sbjct: 77824 tcttcctcctcctcctcctcacagcct 77850
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>dbj|AP006419.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT43O18, TM0307,
            complete sequence
          Length = 119858

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 241  ctcttcctnctcctcctcctcacagc 266
            |||||||| |||||||||||||||||
Sbjct: 7564 ctcttcctcctcctcctcctcacagc 7589
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>gb|AC158576.3| Mus musculus chromosome 7, clone RP24-252B21, complete sequence
          Length = 181195

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 241  ctcttcctnctcctcctcctcacag 265
            |||||||| ||||||||||||||||
Sbjct: 8227 ctcttcctcctcctcctcctcacag 8203
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>gb|AC116484.12| Mus musculus chromosome 16, clone RP23-425F12, complete sequence
          Length = 206793

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 241   ctcttcctnctcctcctcctcacag 265
             |||||||| ||||||||||||||||
Sbjct: 70339 ctcttcctcctcctcctcctcacag 70363
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>gb|AC099701.4| Mus musculus chromosome 7, clone RP23-184F6, complete sequence
          Length = 226167

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 241   ctcttcctnctcctcctcctcacag 265
             |||||||| ||||||||||||||||
Sbjct: 57501 ctcttcctcctcctcctcctcacag 57525
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>gb|AC123738.8| Mus musculus, clone RP24-67N17, complete sequence
          Length = 163442

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 238  aagctcttcctnctcctcctcctc 261
            ||||||||||| ||||||||||||
Sbjct: 1377 aagctcttcctcctcctcctcctc 1400
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>gb|AC154577.2| Mus musculus BAC clone RP23-375G9 from chromosome 17, complete sequence
          Length = 189549

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 245   tcctnctcctcctcctcacagcct 268
             |||| |||||||||||||||||||
Sbjct: 56193 tcctcctcctcctcctcacagcct 56216



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 250   ctcctcctcctcacagcctc 269
             ||||||||||||||||||||
Sbjct: 56161 ctcctcctcctcacagcctc 56180
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>ref|NM_001008838.1| Rattus norvegicus RT1 class I, CE15 (RT1-CE15), mRNA
          Length = 1122

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 241  ctcttcctnctcctcctcctcaca 264
            |||||||| |||||||||||||||
Sbjct: 1028 ctcttcctcctcctcctcctcaca 1005
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>emb|BX883047.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
             assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
             RT1n haplotype; segment 6/11
          Length = 349571

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 241   ctcttcctnctcctcctcctcaca 264
             |||||||| |||||||||||||||
Sbjct: 48698 ctcttcctcctcctcctcctcaca 48675
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>gb|AC104447.2| Homo sapiens chromosome 3 clone RP11-447D11, complete sequence
          Length = 202544

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 13    gtggactacaggcatttaact 33
             |||||||||||||||||||||
Sbjct: 42293 gtggactacaggcatttaact 42313
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>gb|AC161378.2| Mus musculus BAC clone RP23-202A6 from chromosome 16, complete sequence
          Length = 219298

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 238   aagctcttcctnctcctcctcctc 261
             ||||||||||| ||||||||||||
Sbjct: 95230 aagctcttcctcctcctcctcctc 95253
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>gb|AC154429.4| Mus musculus BAC clone RP24-202G18 from chromosome 16, complete
             sequence
          Length = 170875

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 238   aagctcttcctnctcctcctcctc 261
             ||||||||||| ||||||||||||
Sbjct: 49767 aagctcttcctcctcctcctcctc 49790
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>ref|NM_031668.1| Rattus norvegicus MYB binding protein (P160) 1a (Mybbp1a), mRNA
          Length = 3834

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 238  aagctcttcctnctcctcctcctc 261
            ||||||||||| ||||||||||||
Sbjct: 2133 aagctcttcctcctcctcctcctc 2110
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>gb|U83590.1|RNU83590 Rattus norvegicus PAR interacting protein mRNA, complete cds
          Length = 3834

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 238  aagctcttcctnctcctcctcctc 261
            ||||||||||| ||||||||||||
Sbjct: 2133 aagctcttcctcctcctcctcctc 2110
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>ref|XM_482158.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 817

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 245 tcctnctcctcctcctcacagcc 267
           |||| ||||||||||||||||||
Sbjct: 261 tcctcctcctcctcctcacagcc 283
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>ref|XM_507218.1| PREDICTED Oryza sativa (japonica cultivar-group), P0434E03.16-1
           mRNA
          Length = 1790

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 245 tcctnctcctcctcctcacagcc 267
           |||| ||||||||||||||||||
Sbjct: 263 tcctcctcctcctcctcacagcc 285
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>ref|XM_482157.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1734

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 245 tcctnctcctcctcctcacagcc 267
           |||| ||||||||||||||||||
Sbjct: 298 tcctcctcctcctcctcacagcc 320
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>ref|NM_181369.2| Rattus norvegicus histidine rich calcium binding protein (Hrc), mRNA
          Length = 2367

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 241  ctcttcctnctcctcctcctcac 263
            |||||||| ||||||||||||||
Sbjct: 1787 ctcttcctcctcctcctcctcac 1765
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>gb|AF109906.1|MMHC310M6 Mus musculus MHC class III region RD gene, partial cds; Bf, C2, G9A,
             NG22, G9, HSP70, HSP70, HSC70t, and smRNP genes, complete
             cds; G7A gene, partial cds; and unknown genes
          Length = 158405

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 241   ctcttcctnctcctcctcctcac 263
             |||||||| ||||||||||||||
Sbjct: 54500 ctcttcctcctcctcctcctcac 54478
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>gb|AC113099.12| Mus musculus chromosome 8, clone RP23-314N20, complete sequence
          Length = 199694

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 241    ctcttcctnctcctcctcctcac 263
              |||||||| ||||||||||||||
Sbjct: 132542 ctcttcctcctcctcctcctcac 132520
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>gb|AC135357.3| Mus musculus chromosome 8 clone RP24-84L15, complete sequence
          Length = 175089

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 241   ctcttcctnctcctcctcctcac 263
             |||||||| ||||||||||||||
Sbjct: 69761 ctcttcctcctcctcctcctcac 69783
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>ref|XM_580440.2| PREDICTED: Bos taurus similar to zinc finger protein 297 (LOC538456),
            mRNA
          Length = 2761

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 245  tcctnctcctcctcctcacagcc 267
            |||| ||||||||||||||||||
Sbjct: 1555 tcctcctcctcctcctcacagcc 1577
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>ref|XM_415557.1| PREDICTED: Gallus gallus similar to Hypothetical protein MGC76314
            (LOC417284), mRNA
          Length = 4986

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 241  ctcttcctnctcctcctcctcac 263
            |||||||| ||||||||||||||
Sbjct: 4152 ctcttcctcctcctcctcctcac 4130
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>ref|XM_953034.1| Neurospora crassa OR74A hypothetical protein (NCU05932.1) partial
           mRNA
          Length = 1761

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 241 ctcttcctnctcctcctcctcac 263
           |||||||| ||||||||||||||
Sbjct: 70  ctcttcctcctcctcctcctcac 92
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>ref|XM_325786.1| Neurospora crassa OR74A hypothetical protein (NCU05932.1) partial
           mRNA
          Length = 1761

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 241 ctcttcctnctcctcctcctcac 263
           |||||||| ||||||||||||||
Sbjct: 70  ctcttcctcctcctcctcctcac 92
to top
>gb|AC164103.5| Mus musculus BAC clone RP23-427D2 from chromosome 5, complete sequence
          Length = 188588

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 241    ctcttcctnctcctcctcctcac 263
              |||||||| ||||||||||||||
Sbjct: 169554 ctcttcctcctcctcctcctcac 169576
to top
>ref|XM_545531.2| PREDICTED: Canis familiaris similar to Wiskott-Aldrich syndrome
           protein interacting protein (LOC488409), mRNA
          Length = 1690

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 243 cttcctnctcctcctcctcacag 265
           |||||| ||||||||||||||||
Sbjct: 935 cttcctcctcctcctcctcacag 957
to top
>gb|AC107663.10| Mus musculus chromosome 13, clone RP23-99G9, complete sequence
          Length = 213163

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 239    agctcttcctnctcctcctcctc 261
              |||||||||| ||||||||||||
Sbjct: 110956 agctcttcctcctcctcctcctc 110978
to top
>gb|AC116392.12| Mus musculus chromosome 10, clone RP23-93D3, complete sequence
          Length = 275200

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 239  agctcttcctnctcctcctcctc 261
            |||||||||| ||||||||||||
Sbjct: 8943 agctcttcctcctcctcctcctc 8921
to top
>gb|AC139711.4| Mus musculus BAC clone RP23-362F21 from chromosome 19, complete sequence
          Length = 230596

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 239    agctcttcctnctcctcctcctc 261
              |||||||||| ||||||||||||
Sbjct: 178677 agctcttcctcctcctcctcctc 178655
to top
>emb|CR376756.10| Zebrafish DNA sequence from clone CH211-87A15 in linkage group 23,
             complete sequence
          Length = 203373

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   ctcctcctcctcacagcctc 269
             ||||||||||||||||||||
Sbjct: 65781 ctcctcctcctcacagcctc 65762
to top
>gb|AC126257.4| Mus musculus BAC clone RP24-247A8 from chromosome 9, complete sequence
          Length = 174764

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 241   ctcttcctnctcctcctcctcac 263
             |||||||| ||||||||||||||
Sbjct: 69216 ctcttcctcctcctcctcctcac 69238
to top
>gb|AC118020.11| Mus musculus, clone RP23-459B19, complete sequence
          Length = 191669

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 239   agctcttcctnctcctcctcctc 261
             |||||||||| ||||||||||||
Sbjct: 86725 agctcttcctcctcctcctcctc 86747
to top
>gb|AC115122.4| Mus musculus BAC clone RP24-108L20 from chromosome 14, complete sequence
          Length = 163480

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 241    ctcttcctnctcctcctcctcac 263
              |||||||| ||||||||||||||
Sbjct: 121587 ctcttcctcctcctcctcctcac 121609
to top
>emb|CR361545.10| Zebrafish DNA sequence from clone DKEY-45K13 in linkage group 23,
             complete sequence
          Length = 112007

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 250   ctcctcctcctcacagcctc 269
             ||||||||||||||||||||
Sbjct: 69220 ctcctcctcctcacagcctc 69239
to top
>gb|AC108812.9| Mus musculus chromosome 18, clone RP23-417M2, complete sequence
          Length = 202340

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 239   agctcttcctnctcctcctcctc 261
             |||||||||| ||||||||||||
Sbjct: 23399 agctcttcctcctcctcctcctc 23377
to top
>gb|AC153529.7| Mus musculus 10 BAC RP23-239G23 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 153084

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 241   ctcttcctnctcctcctcctcac 263
             |||||||| ||||||||||||||
Sbjct: 47760 ctcttcctcctcctcctcctcac 47782
to top
>gb|BC035024.1| Homo sapiens hypothetical protein AF447587, mRNA (cDNA clone
            MGC:33631 IMAGE:4826923), complete cds
          Length = 2670

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 241  ctcttcctnctcctcctcctcac 263
            |||||||| ||||||||||||||
Sbjct: 1639 ctcttcctcctcctcctcctcac 1617
to top
>emb|AL360092.10| Human DNA sequence from clone RP11-113L23 on chromosome 1, complete
             sequence
          Length = 85689

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 241   ctcttcctnctcctcctcctcac 263
             |||||||| ||||||||||||||
Sbjct: 48221 ctcttccttctcctcctcctcac 48243
to top
>ref|NM_145830.1| Mus musculus euchromatic histone lysine N-methyltransferase 2
            (Ehmt2), transcript variant long, mRNA
          Length = 4026

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 241  ctcttcctnctcctcctcctcac 263
            |||||||| ||||||||||||||
Sbjct: 1074 ctcttcctcctcctcctcctcac 1052
to top
>ref|NM_147151.1| Mus musculus euchromatic histone lysine N-methyltransferase 2
           (Ehmt2), transcript variant short, mRNA
          Length = 3757

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 241 ctcttcctnctcctcctcctcac 263
           |||||||| ||||||||||||||
Sbjct: 903 ctcttcctcctcctcctcctcac 881
to top
>gb|AC074281.20| Homo sapiens X BAC RP11-66N5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 137628

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 241   ctcttcctnctcctcctcctcac 263
             |||||||| ||||||||||||||
Sbjct: 61318 ctcttcctcctcctcctcctcac 61296
to top
>emb|AL133274.8| Human DNA sequence from clone RP13-94P8 on chromosome X Contains part
             of the PCDH11X gene for protocadherin 11 X-linked,
             complete sequence
          Length = 96062

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 241   ctcttcctnctcctcctcctcac 263
             |||||||| ||||||||||||||
Sbjct: 55979 ctcttcctcctcctcctcctcac 55957
to top
>gb|BC058357.1| Mus musculus euchromatic histone lysine N-methyltransferase 2, mRNA
           (cDNA clone IMAGE:6822432), partial cds
          Length = 3905

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 241 ctcttcctnctcctcctcctcac 263
           |||||||| ||||||||||||||
Sbjct: 908 ctcttcctcctcctcctcctcac 886
to top
>emb|BX883051.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
              assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
              RT1n haplotype; segment 10/11
          Length = 348946

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 241    ctcttcctnctcctcctcctcac 263
              |||||||| ||||||||||||||
Sbjct: 221329 ctcttcctcctcctcctcctcac 221307
to top
>ref|NM_203941.1| Xenopus tropicalis Dr1 associated protein 1 (negative cofactor 2
           alpha) (drap1), mRNA
          Length = 1018

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 245 tcctnctcctcctcctcacagcc 267
           |||| ||||||||||||||||||
Sbjct: 824 tcctcctcctcctcctcacagcc 802
to top
>gb|AC153567.6| Mus musculus 10 BAC RP23-187C5 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 226945

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 239    agctcttcctnctcctcctcctc 261
              |||||||||| ||||||||||||
Sbjct: 121392 agctcttcctcctcctcctcctc 121370
to top
>emb|AL954353.14| Mouse DNA sequence from clone RP23-156D8 on chromosome 11 Contains a
              pseudogene similar to part of striatin (calmodulin binding
              protein) (Strn), complete sequence
          Length = 188920

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 241    ctcttcctnctcctcctcctcac 263
              |||||||| ||||||||||||||
Sbjct: 152872 ctcttcctcctcctcctcctcac 152850
to top
>gb|AC087117.9| Mus Musculus Strain C57BL6/J chromosome 17 BAC, RP23-349B4, Complete
             Sequence, complete sequence
          Length = 221899

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 241   ctcttcctnctcctcctcctcac 263
             |||||||| ||||||||||||||
Sbjct: 13799 ctcttcctcctcctcctcctcac 13777
to top
>gb|AC113580.3| Tetraodon nigroviridis clone GSTNA-28E1, complete sequence
          Length = 127223

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 239   agctcttcctnctcctcctcctc 261
             |||||||||| ||||||||||||
Sbjct: 31198 agctcttcctcctcctcctcctc 31220
to top
>dbj|AK125251.1| Homo sapiens cDNA FLJ43261 fis, clone HLUNG1000017
          Length = 1733

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 241 ctcttcctnctcctcctcctcac 263
           |||||||| ||||||||||||||
Sbjct: 718 ctcttcctcctcctcctcctcac 696
to top
>tpg|BK005042.1| TPA: TPA_inf: Oryza sativa (indica cultivar-group) WRKY transcription
            factor 39 (WRKY39) gene, complete cds
          Length = 1303

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 239  agctcttcctnctcctcctcctc 261
            |||||||||| ||||||||||||
Sbjct: 1137 agctcttcctcctcctcctcctc 1115
to top
>gb|AF447587.1| Homo sapiens tissue-type testis unknown mRNA
          Length = 2695

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 241  ctcttcctnctcctcctcctcac 263
            |||||||| ||||||||||||||
Sbjct: 1663 ctcttcctcctcctcctcctcac 1641
to top
>dbj|AK145712.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched
           library, clone:I1C0032H16 product:unclassifiable, full
           insert sequence
          Length = 4515

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 241 ctcttcctnctcctcctcctcac 263
           |||||||| ||||||||||||||
Sbjct: 930 ctcttcctcctcctcctcctcac 952
to top
>dbj|AK154246.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630011O04
            product:HLA-B associated transcript 8, full insert
            sequence
          Length = 3938

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 241  ctcttcctnctcctcctcctcac 263
            |||||||| ||||||||||||||
Sbjct: 1097 ctcttcctcctcctcctcctcac 1075
to top
>gb|AF332093.1|AF332093 White spot syndrome virus, complete genome
          Length = 305107

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 241   ctcttcctnctcctcctcctcac 263
             |||||||| ||||||||||||||
Sbjct: 18874 ctcttcctcctcctcctcctcac 18852
to top
>gb|AC153139.5| Mus musculus BAC clone RP23-411M4 from chromosome 13, complete sequence
          Length = 192541

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 239    agctcttcctnctcctcctcctc 261
              |||||||||| ||||||||||||
Sbjct: 179307 agctcttcctcctcctcctcctc 179329
to top
>gb|AC132139.4| Mus musculus BAC clone RP23-181A24 from chromosome 10, complete sequence
          Length = 206712

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 241    ctcttcctnctcctcctcctcac 263
              |||||||| ||||||||||||||
Sbjct: 102365 ctcttcctcctcctcctcctcac 102387
to top
>gb|AC156949.9| Mus musculus 10 BAC RP24-347J14 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 149183

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 240    gctcttcctnctcctcctcctca 262
              ||||||||| |||||||||||||
Sbjct: 101969 gctcttcctcctcctcctcctca 101991
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 242      tcttcctnctcctcctcctcaca 264
                ||||||| |||||||||||||||
Sbjct: 12323031 tcttcctcctcctcctcctcaca 12323053
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 245      tcctnctcctcctcctcacagcc 267
                |||| ||||||||||||||||||
Sbjct: 18245053 tcctcctcctcctcctcacagcc 18245075
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 239     agctcttcctnctcctcctcctc 261
               |||||||||| ||||||||||||
Sbjct: 9447191 agctcttcctcctcctcctcctc 9447169
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 239      agctcttcctnctcctcctcctc 261
                |||||||||| ||||||||||||
Sbjct: 26586205 agctcttcctcctcctcctcctc 26586183
to top
>gb|AC113052.10| Mus musculus chromosome 5, clone RP23-250D22, complete sequence
          Length = 193698

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 220    ctttgtncacaaactacaaagct 242
              |||||| ||||||||||||||||
Sbjct: 144357 ctttgtacacaaactacaaagct 144379
to top
>gb|AC159114.7| Mus musculus  BAC RP23-370L19 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 169393

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 241    ctcttcctnctcctcctcctcac 263
              |||||||| ||||||||||||||
Sbjct: 167302 ctcttcctcctcctcctcctcac 167280
to top
>gb|AF369029.2| White spot syndrome virus, complete genome
          Length = 292967

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 241   ctcttcctnctcctcctcctcac 263
             |||||||| ||||||||||||||
Sbjct: 67827 ctcttcctcctcctcctcctcac 67805
to top
>gb|BC030348.1| Mus musculus, clone IMAGE:5006779, mRNA
          Length = 891

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 241 ctcttcctnctcctcctcctcac 263
           |||||||| ||||||||||||||
Sbjct: 28  ctcttcctcctcctcctcctcac 50
to top
>gb|AC115994.24| Homo sapiens chromosome 17, clone CTD-2535L24, complete sequence
          Length = 242913

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 241   ctcttcctnctcctcctcctcac 263
             |||||||| ||||||||||||||
Sbjct: 17577 ctcttcctcctcctcctcctcac 17555
to top
>gb|AC005840.2|AC005840 Homo sapiens complete sequence of a PAC clone RP1-102E24 containing
             SYB1, CD27, and SCNN1A genes
          Length = 140026

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 237   aaagctcttcctnctcctcctcc 259
             |||||||||||| ||||||||||
Sbjct: 96420 aaagctcttccttctcctcctcc 96398
to top
>ref|XM_216776.3| PREDICTED: Rattus norvegicus Dicer1, Dcr-1 homolog (Drosophila)
            (predicted) (Dicer1_predicted), mRNA
          Length = 6300

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 239  agctcttcctnctcctcctcctcacag 265
            ||||| |||| ||||||||||||||||
Sbjct: 4509 agctcctcctcctcctcctcctcacag 4483
to top
>ref|XM_342577.2| PREDICTED: Rattus norvegicus similar to RIKEN cDNA F730014I05
            (predicted) (LOC362269), mRNA
          Length = 2756

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 239  agctcttcctnctcctcctcctc 261
            |||||||||| ||||||||||||
Sbjct: 2338 agctcttcctcctcctcctcctc 2360
to top
>emb|BX682551.5| Zebrafish DNA sequence from clone CH211-114M9 in linkage group 3,
             complete sequence
          Length = 167227

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 241   ctcttcctnctcctcctcctcac 263
             |||||||| ||||||||||||||
Sbjct: 39860 ctcttcctcctcctcctcctcac 39838
to top
>ref|NM_139170.2| Homo sapiens hypothetical protein AF447587 (LOC146562), mRNA
          Length = 2716

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 241  ctcttcctnctcctcctcctcac 263
            |||||||| ||||||||||||||
Sbjct: 1689 ctcttcctcctcctcctcctcac 1667
to top
>gb|U75331.1|U75331 Gallus gallus bone morphogenetic protein 1 (BMP1) mRNA, partial cds
          Length = 2078

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 239 agctcttcctnctcctcctcctc 261
           |||||||||| ||||||||||||
Sbjct: 108 agctcttcctcctcctcctcctc 86
to top
>dbj|AK196027.1| Mus musculus cDNA, clone:Y1G0120H08, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000043876, based on BLAT search
          Length = 163

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 241 ctcttcctnctcctcctcctcac 263
           |||||||| ||||||||||||||
Sbjct: 75  ctcttcctcctcctcctcctcac 53
to top
>dbj|AP003212.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0049H05
          Length = 161934

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 239   agctcttcctnctcctcctcctc 261
             |||||||||| ||||||||||||
Sbjct: 59919 agctcttcctcctcctcctcctc 59897
to top
>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0006C08
          Length = 151987

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 239   agctcttcctnctcctcctcctc 261
             |||||||||| ||||||||||||
Sbjct: 60752 agctcttcctcctcctcctcctc 60730
to top
>emb|AL929407.16| Mouse DNA sequence from clone RP23-99C16 on chromosome 2, complete
             sequence
          Length = 144566

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 241   ctcttcctnctcctcctcctcac 263
             |||||||| ||||||||||||||
Sbjct: 14811 ctcttcctcctcctcctcctcac 14789
to top
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1168F12
          Length = 141524

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 242    tcttcctnctcctcctcctcaca 264
              ||||||| |||||||||||||||
Sbjct: 106585 tcttcctcctcctcctcctcaca 106607
to top
>emb|BX648126.1|HSM808273 Homo sapiens mRNA; cDNA DKFZp686H2240 (from clone DKFZp686H2240)
          Length = 3715

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 241  ctcttcctnctcctcctcctcac 263
            |||||||| ||||||||||||||
Sbjct: 1889 ctcttcctcctcctcctcctcac 1867
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>dbj|AP004689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0434E03
          Length = 142414

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 245   tcctnctcctcctcctcacagcc 267
             |||| ||||||||||||||||||
Sbjct: 67365 tcctcctcctcctcctcacagcc 67387
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>dbj|AK119593.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D06, full
            insert sequence
          Length = 1820

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 239  agctcttcctnctcctcctcctc 261
            |||||||||| ||||||||||||
Sbjct: 1231 agctcttcctcctcctcctcctc 1209
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>dbj|AK119576.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-B05, full
           insert sequence
          Length = 1734

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 245 tcctnctcctcctcctcacagcc 267
           |||| ||||||||||||||||||
Sbjct: 298 tcctcctcctcctcctcacagcc 320
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>dbj|AK107047.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-C10, full
           insert sequence
          Length = 1715

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 239 agctcttcctnctcctcctcctc 261
           |||||||||| ||||||||||||
Sbjct: 357 agctcttcctcctcctcctcctc 379
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>gb|AF440570.1| Shrimp white spot syndrome virus, complete genome
          Length = 307287

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 241   ctcttcctnctcctcctcctcac 263
             |||||||| ||||||||||||||
Sbjct: 52463 ctcttcctcctcctcctcctcac 52441
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>gb|AC020663.1|AC020663 Homo sapiens chromosome 16 clone RPCI-11_127I20, complete sequence
          Length = 154218

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 241   ctcttcctnctcctcctcctcac 263
             |||||||| ||||||||||||||
Sbjct: 39733 ctcttcctcctcctcctcctcac 39711
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>dbj|AK073889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075G13, full
           insert sequence
          Length = 1790

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 245 tcctnctcctcctcctcacagcc 267
           |||| ||||||||||||||||||
Sbjct: 263 tcctcctcctcctcctcacagcc 285
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>gb|AY277279.1| Rattus norvegicus histidine-rich calcium binding protein (Hrc) mRNA,
            complete cds
          Length = 2367

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 241  ctcttcctnctcctcctcctcac 263
            |||||||| ||||||||||||||
Sbjct: 1787 ctcttcctcctcctcctcctcac 1765
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>dbj|AK066775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074N21, full
            insert sequence
          Length = 1841

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 239  agctcttcctnctcctcctcctc 261
            |||||||||| ||||||||||||
Sbjct: 1099 agctcttcctcctcctcctcctc 1077
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>gb|AC153824.9| Mus musculus 10 BAC RP23-53D13 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 233119

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 240    gctcttcctnctcctcctcctca 262
              ||||||||| |||||||||||||
Sbjct: 218323 gctcttcctcctcctcctcctca 218345
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>gb|AC103935.10| Mus musculus chromosome 8, clone RP23-431O7, complete sequence
          Length = 205702

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 58     cagcgcagaaacccactgta 77
              ||||||||||||||||||||
Sbjct: 182549 cagcgcagaaacccactgta 182530
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>gb|BC097374.1| Rattus norvegicus ADP-ribosylation factor-like 6 interacting
           protein 4, mRNA (cDNA clone MGC:114409 IMAGE:7444619),
           complete cds
          Length = 1217

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 239 agctcttcctnctcctcctcctc 261
           |||||||||| ||||||||||||
Sbjct: 535 agctcttcctcctcctcctcctc 557
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>gb|BC099769.1| Rattus norvegicus ADP-ribosylation factor-like 6 interacting
           protein 4, mRNA (cDNA clone MGC:124687 IMAGE:7932047),
           complete cds
          Length = 1820

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 239 agctcttcctnctcctcctcctc 261
           |||||||||| ||||||||||||
Sbjct: 548 agctcttcctcctcctcctcctc 570
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>gb|AC100746.4| Mus musculus chromosome 5, clone RP24-399G21, complete sequence
          Length = 157682

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 239   agctcttcctnctcctcctcctc 261
             |||||||||| ||||||||||||
Sbjct: 74275 agctcttcctcctcctcctcctc 74253
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>emb|CT025759.14| Mouse DNA sequence from clone RP24-317H19 on chromosome 17, complete
              sequence
          Length = 171682

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 241    ctcttcctnctcctcctcctcac 263
              |||||||| ||||||||||||||
Sbjct: 133210 ctcttcctcctcctcctcctcac 133188
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>ref|NM_001025630.1| Rattus norvegicus ADP-ribosylation factor-like 6 interacting
           protein 4 (Arl6ip4), mRNA
          Length = 1217

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 239 agctcttcctnctcctcctcctc 261
           |||||||||| ||||||||||||
Sbjct: 535 agctcttcctcctcctcctcctc 557
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>emb|AL929586.19| Zebrafish DNA sequence from clone CH211-188I17, complete sequence
          Length = 154808

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 243    cttcctnctcctcctcctcacagcctc 269
              |||||| ||||||||||||| ||||||
Sbjct: 138440 cttcctcctcctcctcctcaaagcctc 138466
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>gb|AC132327.3| Mus musculus BAC clone RP24-194O6 from 3, complete sequence
          Length = 174267

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 241    ctcttcctnctcctcctcctcac 263
              |||||||| ||||||||||||||
Sbjct: 165591 ctcttcctcctcctcctcctcac 165569
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>gb|AC134862.4| Mus musculus BAC clone RP24-91P2 from 5, complete sequence
          Length = 205726

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 241   ctcttcctnctcctcctcctcac 263
             |||||||| ||||||||||||||
Sbjct: 79004 ctcttcctcctcctcctcctcac 79026
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>gb|BC064181.1| Xenopus tropicalis Dr1 associated protein 1 (negative cofactor 2
           alpha), mRNA (cDNA clone MGC:75665 IMAGE:5379921),
           complete cds
          Length = 1018

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 245 tcctnctcctcctcctcacagcc 267
           |||| ||||||||||||||||||
Sbjct: 824 tcctcctcctcctcctcacagcc 802
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>gb|AC148978.3| Mus musculus BAC clone RP23-359K8 from 14, complete sequence
          Length = 241799

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 241    ctcttcctnctcctcctcctcac 263
              |||||||| ||||||||||||||
Sbjct: 208568 ctcttcctcctcctcctcctcac 208590
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>gb|AC102518.11| Mus musculus chromosome 8, clone RP24-502J8, complete sequence
          Length = 199824

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     cagcgcagaaacccactgta 77
              ||||||||||||||||||||
Sbjct: 171618 cagcgcagaaacccactgta 171637
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>dbj|AB077210.1| Mus musculus mRNA for G9a long, complete cds
          Length = 4026

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 241  ctcttcctnctcctcctcctcac 263
            |||||||| ||||||||||||||
Sbjct: 1074 ctcttcctcctcctcctcctcac 1052
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>dbj|AB077209.1| Mus musculus mRNA for G9a short, complete cds
          Length = 3757

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 241 ctcttcctnctcctcctcctcac 263
           |||||||| ||||||||||||||
Sbjct: 903 ctcttcctcctcctcctcctcac 881
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>gb|AC171273.1| Mus musculus BAC clone RP23-137J12 from chromosome 3, complete sequence
          Length = 234363

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 241    ctcttcctnctcctcctcctcac 263
              |||||||| ||||||||||||||
Sbjct: 233983 ctcttcctcctcctcctcctcac 234005
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>emb|AL451076.14| Mouse DNA sequence from clone RP23-43O20 on chromosome X, complete
            sequence
          Length = 203581

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 241  ctcttcctnctcctcctcctcac 263
            |||||||| ||||||||||||||
Sbjct: 4709 ctcttcctcctcctcctcctcac 4687
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>gb|AC159189.2| Mus musculus BAC clone RP24-159L17 from chromosome 6, complete sequence
          Length = 160884

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 239    agctcttcctnctcctcctcctc 261
              |||||||||| ||||||||||||
Sbjct: 127889 agctcttcctcctcctcctcctc 127867
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>emb|AL807801.3| Mouse DNA sequence from clone RP23-235A15 on chromosome 2, complete
              sequence
          Length = 158498

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 241    ctcttcctnctcctcctcctcac 263
              |||||||| ||||||||||||||
Sbjct: 112234 ctcttcctcctcctcctcctcac 112212


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,743,929
Number of Sequences: 3902068
Number of extensions: 2743929
Number of successful extensions: 292953
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 291668
Number of HSP's gapped (non-prelim): 1271
length of query: 359
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 337
effective length of database: 17,147,199,772
effective search space: 5778606323164
effective search space used: 5778606323164
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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