ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags8f05 |
|---|---|
| Clone Library Name | barley_pub |
>Y992_SYNY3 (P74516) Hypothetical tRNA/rRNA methyltransferase slr0992 (EC| 2.1.1.-) Length = 153 Score = 104 bits (259), Expect = 2e-22 Identities = 61/126 (48%), Positives = 78/126 (61%) Frame = -2 Query: 604 VGPLGFHVDDTKLKRAGLDYWPYVVVKIHDSWGEFRDYFMKQDGQKRLLAFTKRGTHVHS 425 VGPLGF + D LKRAGLDYWPYV + H+S EF ++ Q G LL F+ GT Sbjct: 32 VGPLGFELGDRYLKRAGLDYWPYVDLHYHNSCEEFITHWRGQGG--NLLGFSVTGTVNFW 89 Query: 424 DFSYKPGDWLVFGSETKGLPESALEDCSGEAVGGGTIRIPMVETYVRCLNLSVSVGIALY 245 D++Y+ DWL+ GSET GLP+ + D S + + IPM + VR LNL+ S IAL+ Sbjct: 90 DYTYQSTDWLMMGSETDGLPQ-MMRDLSTQ-----LLCIPMPHSEVRSLNLASSAAIALF 143 Query: 244 EAARQL 227 EA RQL Sbjct: 144 EAGRQL 149
>YIBK_ECOLI (P0AGJ7) Hypothetical tRNA/rRNA methyltransferase yibK (EC 2.1.1.-)| Length = 157 Score = 97.4 bits (241), Expect = 3e-20 Identities = 56/128 (43%), Positives = 76/128 (59%) Frame = -2 Query: 604 VGPLGFHVDDTKLKRAGLDYWPYVVVKIHDSWGEFRDYFMKQDGQKRLLAFTKRGTHVHS 425 + P+GF DD +L+RAGLDY + V H + F ++ + +RL A T +GT HS Sbjct: 32 IEPMGFAWDDKRLRRAGLDYHEFTAVTRHHDYRAF----LEAENPQRLFALTTKGTPAHS 87 Query: 424 DFSYKPGDWLVFGSETKGLPESALEDCSGEAVGGGTIRIPMVETYVRCLNLSVSVGIALY 245 SY+ GD+L+FG ET+GLP S L+ E IRIPMV R +NLS +V + +Y Sbjct: 88 AVSYQDGDYLMFGPETRGLPASILDALPAEQ----KIRIPMVPD-SRSMNLSNAVSVVVY 142 Query: 244 EAARQLNY 221 EA RQL Y Sbjct: 143 EAWRQLGY 150
>YIBK_ECOL6 (P0AGJ8) Hypothetical tRNA/rRNA methyltransferase yibK (EC 2.1.1.-)| Length = 157 Score = 97.4 bits (241), Expect = 3e-20 Identities = 56/128 (43%), Positives = 76/128 (59%) Frame = -2 Query: 604 VGPLGFHVDDTKLKRAGLDYWPYVVVKIHDSWGEFRDYFMKQDGQKRLLAFTKRGTHVHS 425 + P+GF DD +L+RAGLDY + V H + F ++ + +RL A T +GT HS Sbjct: 32 IEPMGFAWDDKRLRRAGLDYHEFTAVTRHHDYRAF----LEAENPQRLFALTTKGTPAHS 87 Query: 424 DFSYKPGDWLVFGSETKGLPESALEDCSGEAVGGGTIRIPMVETYVRCLNLSVSVGIALY 245 SY+ GD+L+FG ET+GLP S L+ E IRIPMV R +NLS +V + +Y Sbjct: 88 AVSYQDGDYLMFGPETRGLPASILDALPAEQ----KIRIPMVPD-SRSMNLSNAVSVVVY 142 Query: 244 EAARQLNY 221 EA RQL Y Sbjct: 143 EAWRQLGY 150
>Y766_HAEIN (P44868) Probable tRNA/rRNA methyltransferase HI0766 (EC 2.1.1.-)| Length = 160 Score = 95.9 bits (237), Expect = 8e-20 Identities = 55/137 (40%), Positives = 80/137 (58%) Frame = -2 Query: 604 VGPLGFHVDDTKLKRAGLDYWPYVVVKIHDSWGEFRDYFMKQDGQKRLLAFTKRGTHVHS 425 + PLGF DD +L+R+GLDY + +K H ++ + F++ + KRL A T +G HS Sbjct: 32 IEPLGFTWDDKRLRRSGLDYHEFAEIKRHKTF----EAFLESEKPKRLFALTTKGCPAHS 87 Query: 424 DFSYKPGDWLVFGSETKGLPESALEDCSGEAVGGGTIRIPMVETYVRCLNLSVSVGIALY 245 +K GD+L+FG ET+G+P S L + E IRIPM R +NLS SV + +Y Sbjct: 88 QVKFKLGDYLMFGPETRGIPMSILNEMPMEQ----KIRIPMTAN-SRSMNLSNSVAVTVY 142 Query: 244 EAARQLNYEQLQYQPDL 194 EA RQL Y+ P++ Sbjct: 143 EAWRQLGYKGAVNLPEV 159
>Y956_LISMF (Q721N0) Hypothetical tRNA/rRNA methyltransferase LMOf2365_0956 (EC| 2.1.1.-) Length = 169 Score = 92.0 bits (227), Expect = 1e-18 Identities = 60/143 (41%), Positives = 79/143 (55%), Gaps = 7/143 (4%) Frame = -2 Query: 604 VGPLGFHVDDTKLKRAGLDYWPYVVVKIHDSWGEFRDYFMKQDGQKRLLAFTKRGTHVHS 425 + PLGF DD LKRAGLDYW V + +DS EF F K +G + TK G HV+S Sbjct: 33 IRPLGFSTDDKMLKRAGLDYWDNVKLSYYDSLDEF---FEKNEGGE-FYYITKFGRHVYS 88 Query: 424 DFSYKPGD---WLVFGSETKGLPESAL----EDCSGEAVGGGTIRIPMVETYVRCLNLSV 266 D Y + + VFG ET GLP++ L E+C +RIPM + ++R LNLS Sbjct: 89 DIDYSDPNKDYFFVFGKETTGLPDALLQKNEENC---------LRIPMTD-HIRSLNLSN 138 Query: 265 SVGIALYEAARQLNYEQLQYQPD 197 + I YEA RQ N+ L +P+ Sbjct: 139 TAAILAYEALRQQNFGALLQEPN 161
>Y934_LISIN (P69001) Hypothetical tRNA/rRNA methyltransferase lin0934 (EC| 2.1.1.-) Length = 169 Score = 88.2 bits (217), Expect = 2e-17 Identities = 57/139 (41%), Positives = 76/139 (54%), Gaps = 3/139 (2%) Frame = -2 Query: 604 VGPLGFHVDDTKLKRAGLDYWPYVVVKIHDSWGEFRDYFMKQDGQKRLLAFTKRGTHVHS 425 + PLGF DD LKRAGLDYW V + +DS EF F K G + TK G HV+S Sbjct: 33 IRPLGFSTDDKMLKRAGLDYWDNVKLSYYDSLDEF---FEKNAGGE-FYYITKFGRHVYS 88 Query: 424 DFSYKPGD---WLVFGSETKGLPESALEDCSGEAVGGGTIRIPMVETYVRCLNLSVSVGI 254 D Y + + VFG ET GLP+ L +A +RIPM + ++R LNLS + + Sbjct: 89 DVDYSDPNKNYFFVFGKETTGLPDELL-----QANEENCLRIPMTD-HIRSLNLSNTAAV 142 Query: 253 ALYEAARQLNYEQLQYQPD 197 YEA RQ ++ L +P+ Sbjct: 143 LAYEALRQQSFGALLQEPN 161
>YGL3_BACST (P32813) Hypothetical tRNA/rRNA methyltransferase in gldA 3'region| (EC 2.1.1.-) (ORF3) Length = 157 Score = 80.1 bits (196), Expect = 5e-15 Identities = 49/134 (36%), Positives = 70/134 (52%), Gaps = 3/134 (2%) Frame = -2 Query: 604 VGPLGFHVDDTKLKRAGLDYWPYVVVKIHDSWGEFRDYFMKQDGQKRLLAFTKRGTHVHS 425 + PLGF DD L+RAGLDYW +V + +DS D+F +Q+ TK G ++ Sbjct: 33 IRPLGFSTDDKMLRRAGLDYWEFVNIHYYDS----LDHFFQQNQNGDFYYITKFGKRYYT 88 Query: 424 DFSYKPGD---WLVFGSETKGLPESALEDCSGEAVGGGTIRIPMVETYVRCLNLSVSVGI 254 + + + +FG ET GLP+ L + +RIPM E VR LNLS + I Sbjct: 89 SYDFSDPSKEIFFIFGRETTGLPKELLAENEDRC-----LRIPMTEN-VRALNLSNTAAI 142 Query: 253 ALYEAARQLNYEQL 212 +YEA RQ ++ L Sbjct: 143 LVYEALRQQSFHGL 156
>Y521_MYCPN (P75257) Hypothetical tRNA/rRNA methyltransferase MG346 homolog (EC| 2.1.1.-) (G12_orf166b) Length = 166 Score = 68.6 bits (166), Expect = 1e-11 Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 4/138 (2%) Frame = -2 Query: 604 VGPLGFHVDDTKLKRAGLDYWPYVVVKIHDSWGEFRDYFMKQDGQKRLLAFTKRGTHVHS 425 + P GF ++D ++ RAGL+ W V + H SW F + K + TK GT Sbjct: 36 IKPYGFFLNDKRMVRAGLNCWDKVQMFEHKSWEHFIE---TTPPNKAIWLLTKSGTTTPD 92 Query: 424 DFSYKPGD----WLVFGSETKGLPESALEDCSGEAVGGGTIRIPMVETYVRCLNLSVSVG 257 + + + + VFG ETKGLP++ +E S V RIP + VR +NLS +V Sbjct: 93 QINMQTDNREQLYFVFGQETKGLPQTLMEQYSQNQV-----RIP-IWNPVRSINLSNTVA 146 Query: 256 IALYEAARQLNYEQLQYQ 203 LYE A+Q +Y L Q Sbjct: 147 CVLYEYAKQNHYFNLDKQ 164
>Y346_MYCGE (P47588) Hypothetical tRNA/rRNA methyltransferase MG346 (EC| 2.1.1.-) Length = 166 Score = 59.7 bits (143), Expect = 6e-09 Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 4/138 (2%) Frame = -2 Query: 604 VGPLGFHVDDTKLKRAGLDYWPYVVVKIHDSWGEFRDYFMKQDGQKRLLAFTKRGTHVHS 425 + P GF ++D ++ RAGL+ W + + H SW F K + TK G Sbjct: 36 IKPYGFFLNDKRMVRAGLNCWDKIQLFEHKSWEHF---LQATTENKTIWLLTKSGDKTPD 92 Query: 424 DF---SYKPGD-WLVFGSETKGLPESALEDCSGEAVGGGTIRIPMVETYVRCLNLSVSVG 257 + P + + VFG ETKGLP++ +++ IRIP+ + VR +NL+ +V Sbjct: 93 QICMTNKLPNELYFVFGQETKGLPKTIMDNFK-----QNQIRIPIWNS-VRSINLANAVV 146 Query: 256 IALYEAARQLNYEQLQYQ 203 LYE ++Q Y L Q Sbjct: 147 CILYEYSKQNQYSNLDKQ 164
>NHS_STRAS (P52391) 23S rRNA methyltransferase (EC 2.1.1.-) (23S rRNA| methylase) Length = 274 Score = 40.0 bits (92), Expect = 0.005 Identities = 26/52 (50%), Positives = 33/52 (63%) Frame = -2 Query: 397 LVFGSETKGLPESALEDCSGEAVGGGTIRIPMVETYVRCLNLSVSVGIALYE 242 LVFGSE KG P ++ S GT+ IPM+ + LN+SVSVGIAL+E Sbjct: 215 LVFGSE-KGGPSGLFQEASA-----GTVSIPMLSS-TESLNVSVSVGIALHE 259
>Y1673_SYNY3 (P74261) Hypothetical tRNA/rRNA methyltransferase slr1673 (EC| 2.1.1.-) Length = 274 Score = 37.0 bits (84), Expect = 0.044 Identities = 24/79 (30%), Positives = 41/79 (51%) Frame = -2 Query: 466 RLLAFTKRGTHVHSDFSYKPGDWLVFGSETKGLPESALEDCSGEAVGGGTIRIPMVETYV 287 +L+A + T + ++ ++FGSE +GL LE + + + IP V Sbjct: 195 QLIATVPQATQTLWEIDFQRPTIVIFGSEGQGLSAPVLELTTHQ------VAIPQAPQ-V 247 Query: 286 RCLNLSVSVGIALYEAARQ 230 LN++++VG+ LYEA RQ Sbjct: 248 ESLNVAIAVGVMLYEARRQ 266
>RLMB_BLOFL (Q7VQP0) 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB (EC| 2.1.1.-) (23S rRNA Gm2251 2'-O-methyltransferase) Length = 254 Score = 37.0 bits (84), Expect = 0.044 Identities = 22/60 (36%), Positives = 33/60 (55%) Frame = -2 Query: 397 LVFGSETKGLPESALEDCSGEAVGGGTIRIPMVETYVRCLNLSVSVGIALYEAARQLNYE 218 LV GSE+ G+ E+C + IP +++ V LN+SV+ GI L+E RQ Y+ Sbjct: 195 LVMGSESSGIRRLTRENCD------KLVHIPTLQSTV-SLNVSVATGIFLFETVRQRKYQ 247
>TSNR_STRCN (P18644) rRNA (adenosine-2'-O-)-methyltransferase (EC 2.1.1.66)| (23S rRNA [AM1067] 2'-O-methyltransferase) (23S rRNA methylase) (Thiostrepton-resistance methylase) Length = 269 Score = 35.0 bits (79), Expect = 0.17 Identities = 24/52 (46%), Positives = 32/52 (61%) Frame = -2 Query: 397 LVFGSETKGLPESALEDCSGEAVGGGTIRIPMVETYVRCLNLSVSVGIALYE 242 L+FGSE KG P E+ S +V IPM+ + LN+SVS+GIAL+E Sbjct: 215 LLFGSE-KGGPSDLFEEASSASVS-----IPMM-SQTESLNVSVSLGIALHE 259
>SYD_BIFLO (Q8G863) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 599 Score = 34.3 bits (77), Expect = 0.29 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 5/78 (6%) Frame = -2 Query: 439 THVHSDFSYKPGDWLVFGSETKGLPESALED-----CSGEAVGGGTIRIPMVETYVRCLN 275 T +H F+ DW+ + PE A+ D C+GE +GGG++RI + R L+ Sbjct: 454 TSMHHPFTMPSKDWI---DKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLD 510 Query: 274 LSVSVGIALYEAARQLNY 221 + +GI EA + + Sbjct: 511 V---LGITKEEADEKFGF 525
>YACO_BACSU (Q06753) Putative trmH family tRNA/rRNA methyltransferase yacO (EC| 2.1.1.-) Length = 249 Score = 33.1 bits (74), Expect = 0.64 Identities = 22/58 (37%), Positives = 29/58 (50%) Frame = -2 Query: 397 LVFGSETKGLPESALEDCSGEAVGGGTIRIPMVETYVRCLNLSVSVGIALYEAARQLN 224 LV GSE KG+ E C I++PM V LN SV+ G+ +YE R+ N Sbjct: 195 LVIGSEGKGMGRLVKEKCD------FLIKLPMAGK-VTSLNASVAAGLLMYEVYRKRN 245
>TSNR_STRLU (P52393) rRNA (adenosine-2'-O-)-methyltransferase (EC 2.1.1.66)| (23S rRNA [AM1067] 2'-O-methyltransferase) (23S rRNA methylase) (Thiostrepton-resistance methylase) Length = 270 Score = 32.7 bits (73), Expect = 0.84 Identities = 26/58 (44%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Frame = -2 Query: 397 LVFGSETKGLPESALEDCSGEAVGGGT--IRIPMVETYVRCLNLSVSVGIALYEAARQ 230 LVFGSE G SGE G T + IPM LN+SVS GIAL+ AR+ Sbjct: 215 LVFGSEKTGP--------SGEFAGVATESVSIPM-NPAAESLNVSVSAGIALHRRARR 263
>IGSF8_HUMAN (Q969P0) Immunoglobulin superfamily member 8 precursor (CD81| partner 3) (Glu-Trp-Ile EWI motif containing protein 2) (EWI-2) (Keratinocytes-associated transmembrane protein 4) (KCT-4) (LIR-D1) (CD316 antigen) Length = 613 Score = 32.3 bits (72), Expect = 1.1 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = -2 Query: 274 LSVSVGIALYEAARQLNYEQLQYQPDLPEEAQGLFPAED 158 +S+S + YE Q N+E Y+P+ P+ A G+ +D Sbjct: 45 VSISCNVTGYEGPAQQNFEWFLYRPEAPDTALGIVSTKD 83
>HIS4_GEOSL (P60581) 1-(5-phosphoribosyl)-5-[(5-| phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length = 244 Score = 32.3 bits (72), Expect = 1.1 Identities = 22/61 (36%), Positives = 29/61 (47%) Frame = -2 Query: 331 VGGGTIRIPMVETYVRCLNLSVSVGIALYEAARQLNYEQLQYQPDLPEEAQGLFPAEDIY 152 +GGG IP +E Y LS+ +G + A Q N P+L EEA LFP + Sbjct: 79 LGGGIRDIPTIEAY-----LSLGIGRVILGTAAQRN-------PELVEEACRLFPGRIVV 126 Query: 151 G 149 G Sbjct: 127 G 127
>HIS4_GEOMG (Q39YP3) 1-(5-phosphoribosyl)-5-[(5-| phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length = 244 Score = 32.3 bits (72), Expect = 1.1 Identities = 22/61 (36%), Positives = 29/61 (47%) Frame = -2 Query: 331 VGGGTIRIPMVETYVRCLNLSVSVGIALYEAARQLNYEQLQYQPDLPEEAQGLFPAEDIY 152 +GGG IP +E Y LS+ +G + A Q N P+L EEA LFP + Sbjct: 79 LGGGIRDIPTIEAY-----LSLGIGRVILGTAAQRN-------PELVEEACRLFPGRIVV 126 Query: 151 G 149 G Sbjct: 127 G 127
>Y516_BORBU (O51468) Hypothetical tRNA/rRNA methyltransferase BB0516 (EC| 2.1.1.-) Length = 228 Score = 32.0 bits (71), Expect = 1.4 Identities = 22/58 (37%), Positives = 31/58 (53%) Frame = -2 Query: 397 LVFGSETKGLPESALEDCSGEAVGGGTIRIPMVETYVRCLNLSVSVGIALYEAARQLN 224 L+ G+E KG+ + E+ IRIP + LN+SVS GI ++E RQLN Sbjct: 176 LILGNEGKGVHKLIKENSDF------LIRIP-TSGKIDSLNVSVSTGILIFEIKRQLN 226
>MURB_THEFY (Q47LH5) UDP-N-acetylenolpyruvoylglucosamine reductase (EC| 1.1.1.158) (UDP-N-acetylmuramate dehydrogenase) Length = 356 Score = 31.6 bits (70), Expect = 1.9 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +1 Query: 187 PPGDQVGTGAARSSAAWLLRTALFQR*PRGSGTG 288 PP G G ++SAAWL+ A F P+G GTG Sbjct: 273 PPAYPDGDGRVKTSAAWLIERAGF---PKGYGTG 303
>SYD_CORDI (Q6NGZ4) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 601 Score = 30.4 bits (67), Expect = 4.2 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 2/75 (2%) Frame = -2 Query: 439 THVHSDFSYKPGDWLVFGSETKGLPESALED--CSGEAVGGGTIRIPMVETYVRCLNLSV 266 T VH F+ +WL E G + D C+G +GGG+IRI + R + Sbjct: 452 TAVHHAFTSPKPEWLDSFDENPGEATAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKV-- 509 Query: 265 SVGIALYEAARQLNY 221 +GI EA + + Sbjct: 510 -MGITEDEAREKFGF 523
>ZMPB_STRR6 (Q8DQN5) Zinc metalloprotease zmpB precursor (EC 3.4.24.-)| Length = 1876 Score = 30.4 bits (67), Expect = 4.2 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Frame = -2 Query: 532 VVKIHDS-WGEFRDYFMKQDGQKR--LLAFTKRGTHVHSDFSYKPGDWLVFGSETKGLPE 362 + KI++ W + + YFM + + + AFT THV+ +Y GDW G++ + + Sbjct: 1498 MAKIYERPWKDDQVYFMVTNMMEPFGISAFTHETTHVNDRMAYYGGDWHREGTDLEAFAQ 1557 Query: 361 SALE 350 L+ Sbjct: 1558 GMLQ 1561
>CBX2_HUMAN (Q14781) Chromobox protein homolog 2| Length = 532 Score = 30.0 bits (66), Expect = 5.4 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = +3 Query: 324 PPTASPEQSSRADSGSPFVSDPNTSQSPGLYEKSEWTWVP 443 P ++ E+SS +DS S P+T Q+P + ++ W P Sbjct: 456 PEMSAGEESSSSDSDPDSASPPSTGQNPSVSVQTSQDWKP 495
>BT1A1_HUMAN (Q13410) Butyrophilin subfamily 1 member A1 precursor (BT)| Length = 526 Score = 29.6 bits (65), Expect = 7.1 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = +2 Query: 272 EVQAPDIGFHHRNSDGSTTYGFSGTVFQGGLW*PFCL 382 + ++ DI F++ N DGS Y FS F G L FCL Sbjct: 427 DYESGDISFYNMN-DGSDIYTFSNVTFSGPLRPFFCL 462
>VGLG_BEFV (P32595) Spike glycoprotein precursor| Length = 623 Score = 29.6 bits (65), Expect = 7.1 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Frame = +2 Query: 242 FVQRYSNADREVQAPDIGFHHRNSDGSTTY-GFSGTVFQGGLW 367 F ++ +R +APDIG H N +T+ G +G +F+ G W Sbjct: 217 FRSELNDKERLWEAPDIGLVHVNKGCLSTFCGKNGIIFEDGEW 259
>NPS3B_HUMAN (Q9BS92) Protein NipSnap3B (SNAP1)| Length = 247 Score = 29.6 bits (65), Expect = 7.1 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Frame = -2 Query: 505 EFRDYFMKQDGQKRLLAFTKRGTHVHSDFSYKPGDWLV-FGSET 377 EFR Y++K + K+ H+ + +S G W V FG T Sbjct: 38 EFRTYYLKPSNMNAFMENLKKNIHLRTSYSELVGFWSVEFGGRT 81
>RLMB_NITEU (Q82XD1) 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB (EC| 2.1.1.-) (23S rRNA Gm2251 2'-O-methyltransferase) Length = 260 Score = 29.6 bits (65), Expect = 7.1 Identities = 22/61 (36%), Positives = 30/61 (49%) Frame = -2 Query: 412 KPGDWLVFGSETKGLPESALEDCSGEAVGGGTIRIPMVETYVRCLNLSVSVGIALYEAAR 233 +P W V G+E G+ E C + IPM + + LN+SVS GI L+E R Sbjct: 190 RPLAW-VLGAEDGGMRRLTREACDL------LVSIPMSGS-IESLNVSVSAGICLFETFR 241 Query: 232 Q 230 Q Sbjct: 242 Q 242
>DAB1_MACFA (Q9BGX5) Disabled homolog 1| Length = 555 Score = 29.3 bits (64), Expect = 9.3 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 7/42 (16%) Frame = +3 Query: 324 PPTASPEQSSRADSGSPFVSDPNTS-------QSPGLYEKSE 428 PPT +P QSS + S + SDP T +SP E+ E Sbjct: 482 PPTPAPRQSSPSKSSASHASDPTTDDIFEEGFESPSKSEEQE 523
>DAB1_HUMAN (O75553) Disabled homolog 1| Length = 555 Score = 29.3 bits (64), Expect = 9.3 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 7/42 (16%) Frame = +3 Query: 324 PPTASPEQSSRADSGSPFVSDPNTS-------QSPGLYEKSE 428 PPT +P QSS + S + SDP T +SP E+ E Sbjct: 482 PPTPAPRQSSPSKSSASHASDPTTDDIFEEGFESPSKSEEQE 523
>RBP1_HUMAN (Q15311) RalA-binding protein 1 (RalBP1) (Ral-interacting protein| 1) (76-kDa Ral-interacting protein) (Dinitrophenyl S-glutathione ATPase) (DNP-SG ATPase) Length = 654 Score = 29.3 bits (64), Expect = 9.3 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 5/40 (12%) Frame = +3 Query: 324 PPTASPEQSSRADSGSPFVSDPNT-----SQSPGLYEKSE 428 PPT+SP + R + GS P++ ++ PGLY E Sbjct: 6 PPTSSPSEHRRVEHGSGLTRTPSSEEISPTKFPGLYRTGE 45
>IGSF8_MOUSE (Q8R366) Immunoglobulin superfamily member 8 precursor (CD81| partner 3) (Glu-Trp-Ile EWI motif containing protein 2) (EWI-2) (Keratinocytes-associated transmembrane protein 4) (KCT-4) (Prostaglandin regulatory-like protein) (CD316 antigen) Length = 611 Score = 29.3 bits (64), Expect = 9.3 Identities = 11/39 (28%), Positives = 22/39 (56%) Frame = -2 Query: 274 LSVSVGIALYEAARQLNYEQLQYQPDLPEEAQGLFPAED 158 +S+S ++ YE Q ++E Y+P+ P + G+ +D Sbjct: 43 VSISCNVSDYEGPAQQDFEWFMYRPEAPATSLGIVSTKD 81
>RBP1_MOUSE (Q62172) RalA-binding protein 1 (RalBP1) (Ral-interacting protein| 1) (Dinitrophenyl S-glutathione ATPase) (DNP-SG ATPase) Length = 647 Score = 29.3 bits (64), Expect = 9.3 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 5/40 (12%) Frame = +3 Query: 324 PPTASPEQSSRADSGSPFVSDPNT-----SQSPGLYEKSE 428 PP++SP + RA+ GS P++ ++ PGLY E Sbjct: 6 PPSSSPSEHRRAEHGSGLTRTPSSEEISPTKFPGLYRTGE 45
>MURB_STRCO (Q9L0L7) UDP-N-acetylenolpyruvoylglucosamine reductase (EC| 1.1.1.158) (UDP-N-acetylmuramate dehydrogenase) Length = 383 Score = 29.3 bits (64), Expect = 9.3 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = +1 Query: 187 PPGDQVGTGAARSSAAWLLRTALFQR*PRGSGTGHRFPPSEFGWFHHLRL 336 PP G G ++SAAWL+ A F +G GTG P+ H L L Sbjct: 300 PPAFPAGEGRVKTSAAWLIDKAGF---TKGYGTG----PARISTKHTLAL 342 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,504,945 Number of Sequences: 219361 Number of extensions: 2089197 Number of successful extensions: 6473 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 6149 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6445 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
