ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags7p24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_190647.1| Oryza sativa (japonica cultivar-group), predic... 168 1e-38
2gb|AY168645.1| Oryza sativa (japonica cultivar-group) COI1 mRNA,... 168 1e-38
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
4gb|DQ028826.1| Oryza sativa (japonica cultivar-group) coronatine... 168 1e-38
5dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
6dbj|AK121543.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
7gb|AY109565.1| Zea mays CL896_1 mRNA sequence 125 2e-25
8gb|BT019152.1| Zea mays clone Contig815.F mRNA sequence 78 4e-11
9gb|AY111944.1| Zea mays CL896_2 mRNA sequence 76 2e-10
10gb|AY109490.1| Zea mays CL920_1 mRNA sequence 60 9e-06
11gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
12dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
13dbj|AK101514.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
14gb|AC161171.5| Mus musculus chromosome 3, clone RP24-326F21, com... 44 0.53
15gb|L06434.2|RATNEUROTR Rattus norvegicus NTT4 (Ntt4) mRNA, compl... 42 2.1
16gb|AC182436.1| Mus musculus chromosome 5, clone wi1-1982K15, com... 42 2.1
17ref|NM_001033079.1| Rattus norvegicus solute carrier family 6 (n... 42 2.1
18dbj|AK080705.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 42 2.1
19dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
20emb|AL954242.1|PTB109N16 Pan troglodytes chromosome 22 BAC PTB-1... 42 2.1
21gb|AC104742.9| Mus musculus chromosome 5, clone RP24-334A12, com... 42 2.1
22dbj|AP001752.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 2.1
23gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
24emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007... 42 2.1
25emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494... 42 2.1
26gb|AC102518.11| Mus musculus chromosome 8, clone RP24-502J8, com... 42 2.1
27dbj|AP001052.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 42 2.1
28gb|AC091775.10| Oryza sativa chromosome 3 BAC OSJNBa0004G17 geno... 40 8.3
29gb|AC116505.13| Mus musculus chromosome 5, clone RP24-302O2, com... 40 8.3
30gb|AC163094.5| Mus musculus chromosome 5, clone RP23-123P10, com... 40 8.3
31gb|AC154354.2| Mus musculus BAC clone RP23-203C5 from chromosome... 40 8.3
32gb|AC165273.2| Mus musculus BAC clone RP24-267I1 from chromosome... 40 8.3
33gb|AC113063.8| Mus musculus chromosome 15, clone RP23-261F24, co... 40 8.3
34gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.3
35gb|AC122025.3| Mus musculus BAC clone RP24-388G8 from 12, comple... 40 8.3
36gb|DQ378878.1| Cyprinus carpio clone LiC-12 microsatellite sequence 40 8.3
37gb|CP000107.1| Ehrlichia canis str. Jake, complete genome 40 8.3
38emb|Z85994.1|HS32I10 Human DNA sequence from clone RP1-32I10 on ... 40 8.3
39gb|AC114543.10| Mus musculus, clone RP24-107C11, complete sequence 40 8.3
40gb|AC023049.14| Homo sapiens 3 BAC RP11-468F18 (Roswell Park Can... 40 8.3
41gb|AC175112.5| Mus musculus chromosome 5, clone wi1-1409A7, comp... 40 8.3
42gb|AC154328.2| Mus musculus BAC clone RP23-298N23 from chromosom... 40 8.3
43gb|AC116801.9| Mus musculus chromosome 8, clone RP24-337F7, comp... 40 8.3
44gb|AC158388.2| Mus musculus BAC clone RP24-545I9 from chromosome... 40 8.3
45dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
46dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
47gb|AC156995.6| Mus musculus chromosome 5, clone RP23-77E18, comp... 40 8.3
48gb|AC138553.3| Ornithorhynchus anatinus clone OA_Bb-524H4, compl... 40 8.3
49dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
50dbj|AP006158.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
51dbj|AP005697.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
52gb|AC121108.12| Mus musculus chromosome 3, clone RP24-417H10, co... 40 8.3
53gb|AC153866.6| Mus musculus 10 BAC RP23-350O24 (Roswell Park Can... 40 8.3
54emb|AL929003.17| Zebrafish DNA sequence from clone DKEY-235D18 i... 40 8.3
55gb|AC118008.14| Mus musculus chromosome 15, clone RP23-435B2, co... 40 8.3
56gb|U19269.1|DMU19269 Drosophila melanogaster Dachshund (dachshun... 40 8.3
57emb|AL627405.17| Mouse DNA sequence from clone RP23-183D11 on ch... 40 8.3
58emb|AL670227.7| Mouse DNA sequence from clone RP23-317N1 on chro... 40 8.3 
>ref|NM_190647.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1893

 Score =  168 bits (85), Expect = 1e-38
 Identities = 212/253 (83%), Gaps = 1/253 (0%)
 Strand = Plus / Minus

                                                                        
Query: 360  cagggctcggaggcgtgaactcgatgttccagaatggcctcgccatgagaaggagctcga 419
            ||||||||||||| || ||||||||||||||||| ||||| |||||||| ||||| || |
Sbjct: 1762 cagggctcggaggtgtaaactcgatgttccagaaaggcctggccatgagcaggaggtcaa 1703

                                                                        
Query: 420  ggcctgctggggaggccttatagccttgcacccatatgtacctgagcgacggcatatgga 479
            |||||| | | || ||  | || ||||||||||||||||| || || || ||||| || |
Sbjct: 1702 ggcctgtttgagatgctctgtatccttgcacccatatgtatctcagggagggcatctgca 1643

                                                                        
Query: 480  gcaccgcgagggaaagagcttgctcgctgaagcagcagctccgaagctcaagcttccgca 539
            | || |||||||| | |||| ||||||||||||||||||| |  |  ||||||||| | |
Sbjct: 1642 gtacagcgagggacaaagctcgctcgctgaagcagcagcttctcaattcaagcttctgaa 1583

                                                                        
Query: 540  ggttggtgcatccgattgcgaagcggatcaatccctggtcagattcacccgacgttgccc 599
            |||||||||| || | |||||| ||||||||||| |||||||||||| || || ||||||
Sbjct: 1582 ggttggtgcagcccactgcgaaacggatcaatccatggtcagattca-ccaacattgccc 1524

                         
Query: 600  agtagcatgtatt 612
            |||||||||||||
Sbjct: 1523 agtagcatgtatt 1511



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 278  ccagcaagggagtagtacgcgagaacctgggcttgcctctccccacagggttc 330
            ||||||||||| ||||| || |||||||| || || || ||| ||||||||||
Sbjct: 1844 ccagcaagggaatagtaggcaagaacctgagcatggctatccacacagggttc 1792
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>gb|AY168645.1| Oryza sativa (japonica cultivar-group) COI1 mRNA, complete cds
          Length = 2088

 Score =  168 bits (85), Expect = 1e-38
 Identities = 212/253 (83%), Gaps = 1/253 (0%)
 Strand = Plus / Minus

                                                                        
Query: 360  cagggctcggaggcgtgaactcgatgttccagaatggcctcgccatgagaaggagctcga 419
            ||||||||||||| || ||||||||||||||||| ||||| |||||||| ||||| || |
Sbjct: 1722 cagggctcggaggtgtaaactcgatgttccagaaaggcctggccatgagcaggaggtcaa 1663

                                                                        
Query: 420  ggcctgctggggaggccttatagccttgcacccatatgtacctgagcgacggcatatgga 479
            |||||| | | || ||  | || ||||||||||||||||| || || || ||||| || |
Sbjct: 1662 ggcctgtttgagatgctctgtatccttgcacccatatgtatctcagggagggcatctgca 1603

                                                                        
Query: 480  gcaccgcgagggaaagagcttgctcgctgaagcagcagctccgaagctcaagcttccgca 539
            | || |||||||| | |||| ||||||||||||||||||| |  |  ||||||||| | |
Sbjct: 1602 gtacagcgagggacaaagctcgctcgctgaagcagcagcttctcaattcaagcttctgaa 1543

                                                                        
Query: 540  ggttggtgcatccgattgcgaagcggatcaatccctggtcagattcacccgacgttgccc 599
            |||||||||| || | |||||| ||||||||||| |||||||||||| || || ||||||
Sbjct: 1542 ggttggtgcagcccactgcgaaacggatcaatccatggtcagattca-ccaacattgccc 1484

                         
Query: 600  agtagcatgtatt 612
            |||||||||||||
Sbjct: 1483 agtagcatgtatt 1471



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 278  ccagcaagggagtagtacgcgagaacctgggcttgcctctccccacagggttc 330
            ||||||||||| ||||| || |||||||| || || || ||| ||||||||||
Sbjct: 1804 ccagcaagggaatagtaggcaagaacctgagcatggctatccacacagggttc 1752
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  168 bits (85), Expect = 1e-38
 Identities = 212/253 (83%), Gaps = 1/253 (0%)
 Strand = Plus / Minus

                                                                            
Query: 360      cagggctcggaggcgtgaactcgatgttccagaatggcctcgccatgagaaggagctcga 419
                ||||||||||||| || ||||||||||||||||| ||||| |||||||| ||||| || |
Sbjct: 36743759 cagggctcggaggtgtaaactcgatgttccagaaaggcctggccatgagcaggaggtcaa 36743700

                                                                            
Query: 420      ggcctgctggggaggccttatagccttgcacccatatgtacctgagcgacggcatatgga 479
                |||||| | | || ||  | || ||||||||||||||||| || || || ||||| || |
Sbjct: 36743699 ggcctgtttgagatgctctgtatccttgcacccatatgtatctcagggagggcatctgca 36743640

                                                                            
Query: 480      gcaccgcgagggaaagagcttgctcgctgaagcagcagctccgaagctcaagcttccgca 539
                | || |||||||| | |||| ||||||||||||||||||| |  |  ||||||||| | |
Sbjct: 36743639 gtacagcgagggacaaagctcgctcgctgaagcagcagcttctcaattcaagcttctgaa 36743580

                                                                            
Query: 540      ggttggtgcatccgattgcgaagcggatcaatccctggtcagattcacccgacgttgccc 599
                |||||||||| || | |||||| ||||||||||| |||||||||||| || || ||||||
Sbjct: 36743579 ggttggtgcagcccactgcgaaacggatcaatccatggtcagattca-ccaacattgccc 36743521

                             
Query: 600      agtagcatgtatt 612
                |||||||||||||
Sbjct: 36743520 agtagcatgtatt 36743508



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                     
Query: 278      ccagcaagggagtagtacgcgagaacctgggcttgcctctccccacagggttc 330
                ||||||||||| ||||| || |||||||| || || || ||| ||||||||||
Sbjct: 36743841 ccagcaagggaatagtaggcaagaacctgagcatggctatccacacagggttc 36743789



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 94      ataaaagcagctagctaatg 113
               ||||||||||||||||||||
Sbjct: 2090782 ataaaagcagctagctaatg 2090763
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>gb|DQ028826.1| Oryza sativa (japonica cultivar-group) coronatine-insensitive 1 mRNA,
            complete cds
          Length = 1893

 Score =  168 bits (85), Expect = 1e-38
 Identities = 212/253 (83%), Gaps = 1/253 (0%)
 Strand = Plus / Minus

                                                                        
Query: 360  cagggctcggaggcgtgaactcgatgttccagaatggcctcgccatgagaaggagctcga 419
            ||||||||||||| || ||||||||||||||||| ||||| |||||||| ||||| || |
Sbjct: 1762 cagggctcggaggtgtaaactcgatgttccagaaaggcctggccatgagcaggaggtcaa 1703

                                                                        
Query: 420  ggcctgctggggaggccttatagccttgcacccatatgtacctgagcgacggcatatgga 479
            |||||| | | || ||  | || ||||||||||||||||| || || || ||||| || |
Sbjct: 1702 ggcctgtttgagatgctctgtatccttgcacccatatgtatctcagggagggcatctgca 1643

                                                                        
Query: 480  gcaccgcgagggaaagagcttgctcgctgaagcagcagctccgaagctcaagcttccgca 539
            | || |||||||| | |||| ||||||||||||||||||| |  |  ||||||||| | |
Sbjct: 1642 gtacagcgagggacaaagctcgctcgctgaagcagcagcttctcaattcaagcttctgaa 1583

                                                                        
Query: 540  ggttggtgcatccgattgcgaagcggatcaatccctggtcagattcacccgacgttgccc 599
            |||||||||| || | |||||| ||||||||||| |||||||||||| || || ||||||
Sbjct: 1582 ggttggtgcagcccactgcgaaacggatcaatccatggtcagattca-ccaacattgccc 1524

                         
Query: 600  agtagcatgtatt 612
            |||||||||||||
Sbjct: 1523 agtagcatgtatt 1511



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 278  ccagcaagggagtagtacgcgagaacctgggcttgcctctccccacagggttc 330
            ||||||||||| ||||| || |||||||| || || || ||| ||||||||||
Sbjct: 1844 ccagcaagggaatagtaggcaagaacctgagcatggctatccacacagggttc 1792
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>dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0529E05
          Length = 134982

 Score =  168 bits (85), Expect = 1e-38
 Identities = 212/253 (83%), Gaps = 1/253 (0%)
 Strand = Plus / Minus

                                                                         
Query: 360   cagggctcggaggcgtgaactcgatgttccagaatggcctcgccatgagaaggagctcga 419
             ||||||||||||| || ||||||||||||||||| ||||| |||||||| ||||| || |
Sbjct: 70074 cagggctcggaggtgtaaactcgatgttccagaaaggcctggccatgagcaggaggtcaa 70015

                                                                         
Query: 420   ggcctgctggggaggccttatagccttgcacccatatgtacctgagcgacggcatatgga 479
             |||||| | | || ||  | || ||||||||||||||||| || || || ||||| || |
Sbjct: 70014 ggcctgtttgagatgctctgtatccttgcacccatatgtatctcagggagggcatctgca 69955

                                                                         
Query: 480   gcaccgcgagggaaagagcttgctcgctgaagcagcagctccgaagctcaagcttccgca 539
             | || |||||||| | |||| ||||||||||||||||||| |  |  ||||||||| | |
Sbjct: 69954 gtacagcgagggacaaagctcgctcgctgaagcagcagcttctcaattcaagcttctgaa 69895

                                                                         
Query: 540   ggttggtgcatccgattgcgaagcggatcaatccctggtcagattcacccgacgttgccc 599
             |||||||||| || | |||||| ||||||||||| |||||||||||| || || ||||||
Sbjct: 69894 ggttggtgcagcccactgcgaaacggatcaatccatggtcagattca-ccaacattgccc 69836

                          
Query: 600   agtagcatgtatt 612
             |||||||||||||
Sbjct: 69835 agtagcatgtatt 69823



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                  
Query: 278   ccagcaagggagtagtacgcgagaacctgggcttgcctctccccacagggttc 330
             ||||||||||| ||||| || |||||||| || || || ||| ||||||||||
Sbjct: 70156 ccagcaagggaatagtaggcaagaacctgagcatggctatccacacagggttc 70104
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>dbj|AK121543.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032A10, full
            insert sequence
          Length = 2163

 Score =  168 bits (85), Expect = 1e-38
 Identities = 212/253 (83%), Gaps = 1/253 (0%)
 Strand = Plus / Minus

                                                                        
Query: 360  cagggctcggaggcgtgaactcgatgttccagaatggcctcgccatgagaaggagctcga 419
            ||||||||||||| || ||||||||||||||||| ||||| |||||||| ||||| || |
Sbjct: 1738 cagggctcggaggtgtaaactcgatgttccagaaaggcctggccatgagcaggaggtcaa 1679

                                                                        
Query: 420  ggcctgctggggaggccttatagccttgcacccatatgtacctgagcgacggcatatgga 479
            |||||| | | || ||  | || ||||||||||||||||| || || || ||||| || |
Sbjct: 1678 ggcctgtttgagatgctctgtatccttgcacccatatgtatctcagggagggcatctgca 1619

                                                                        
Query: 480  gcaccgcgagggaaagagcttgctcgctgaagcagcagctccgaagctcaagcttccgca 539
            | || |||||||| | |||| ||||||||||||||||||| |  |  ||||||||| | |
Sbjct: 1618 gtacagcgagggacaaagctcgctcgctgaagcagcagcttctcaattcaagcttctgaa 1559

                                                                        
Query: 540  ggttggtgcatccgattgcgaagcggatcaatccctggtcagattcacccgacgttgccc 599
            |||||||||| || | |||||| ||||||||||| |||||||||||| || || ||||||
Sbjct: 1558 ggttggtgcagcccactgcgaaacggatcaatccatggtcagattca-ccaacattgccc 1500

                         
Query: 600  agtagcatgtatt 612
            |||||||||||||
Sbjct: 1499 agtagcatgtatt 1487
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>gb|AY109565.1| Zea mays CL896_1 mRNA sequence
          Length = 2190

 Score =  125 bits (63), Expect = 2e-25
 Identities = 142/167 (85%), Gaps = 1/167 (0%)
 Strand = Plus / Minus

                                                                        
Query: 446  tgcacccatatgtacctgagcgacggcatatggagcaccgcgagggaaagagcttgctcg 505
            ||||||||||||||||| ||||| ||||| |||||||| || |  |  |||||| |||||
Sbjct: 1743 tgcacccatatgtacctcagcgagggcatctggagcacggccactgccagagctcgctcg 1684

                                                                        
Query: 506  ctgaagcagcagctccgaagctcaagcttccgcaggttggtgcatccgattgcgaagcgg 565
            ||||||||||||| ||  ||||| |||||||||||||||||||||||  |||| ||  ||
Sbjct: 1683 ctgaagcagcagcccctcagctcgagcttccgcaggttggtgcatcccgttgcaaactgg 1624

                                                           
Query: 566  atcaatccctggtcagattcacccgacgttgcccagtagcatgtatt 612
            |||||||| | |||||||||| || |||||||| || ||||||||||
Sbjct: 1623 atcaatccgttgtcagattca-ccaacgttgccgagcagcatgtatt 1578



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 259  agggcagtcctgcctctgcccagcaagggagtagtacgcgagaacctgggc 309
            |||||||||| |||||   |||||||||||||| ||||| || ||||||||
Sbjct: 1930 agggcagtccggcctccttccagcaagggagtaatacgcaaggacctgggc 1880
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>gb|BT019152.1| Zea mays clone Contig815.F mRNA sequence
          Length = 1411

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 187/235 (79%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                       
Query: 376 gaactcgatgttccagaatggcctcgccatgagaaggagctcgaggcctgctggggaggc 435
           |||||||||||||||| | ||||| |||||||| | ||| ||  |||| |   | |||||
Sbjct: 941 gaactcgatgttccagtacggcctggccatgagcatgaggtcccggcccgtctgagaggc 882

                                                                       
Query: 436 cttatagccttgcacccatatgtacctgagcgacggcatatggagcaccgcgagggaaag 495
           | | || || |||||||||| |||||| ||||| ||||| |||||||| || |  |  ||
Sbjct: 881 cctgtacccctgcacccatacgtacctcagcgagggcatctggagcacggccaccgccag 822

                                                                       
Query: 496 agcttgctcgctgaagcagcagctccgaagctcaagcttccgcaggttggtgcatccgat 555
            ||  |||||||||||||||||| ||  ||||| |||||||||||||||| ||| || ||
Sbjct: 821 ggcccgctcgctgaagcagcagcccctcagctccagcttccgcaggttggcgcaccccat 762

                                                                  
Query: 556 tgcgaagcggatcaatccctggtcagattcacccgacgttgcccagtagcatgta 610
            ||||| |||||||  || | ||| |||||  ||||||||||| || ||||||||
Sbjct: 761 cgcgaaccggatcagcccgttgtccgattc-gccgacgttgccgagcagcatgta 708



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 278  ccagcaagggagtagtacgcgagaacctg 306
            ||||| ||||| |||||||||||||||||
Sbjct: 1039 ccagcgagggaatagtacgcgagaacctg 1011
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>gb|AY111944.1| Zea mays CL896_2 mRNA sequence
          Length = 579

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 155/194 (79%)
 Strand = Plus / Minus

                                                                       
Query: 376 gaactcgatgttccagaatggcctcgccatgagaaggagctcgaggcctgctggggaggc 435
           |||||||||||||||| | ||||| |||||||| | ||| ||  |||| |   | |||||
Sbjct: 210 gaactcgatgttccagtacggcctggccatgagcatgaggtcccggcccgtctgagaggc 151

                                                                       
Query: 436 cttatagccttgcacccatatgtacctgagcgacggcatatggagcaccgcgagggaaag 495
           | | || || |||||||||| |||||| ||||| ||||| |||||||| || |  |  ||
Sbjct: 150 cctgtacccctgcacccatacgtacctcagcgagggcatctggagcacggccaccgccag 91

                                                                       
Query: 496 agcttgctcgctgaagcagcagctccgaagctcaagcttccgcaggttggtgcatccgat 555
            ||  |||||||||||||||||| ||  ||||| |||||||||||||||| ||| || ||
Sbjct: 90  ggcccgctcgctgaagcagcagcccctcagctccagcttccgcaggttggcgcaccccat 31

                         
Query: 556 tgcgaagcggatca 569
            ||||| |||||||
Sbjct: 30  cgcgaaccggatca 17



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 278 ccagcaagggagtagtacgcgagaacctg 306
           ||||| ||||| |||||||||||||||||
Sbjct: 308 ccagcgagggaatagtacgcgagaacctg 280



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 17  tagtccaagcgacaacggcaacttattgcact 48
           |||| ||||| ||||| |||||||||||||||
Sbjct: 508 tagtacaagcaacaaccgcaacttattgcact 477
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>gb|AY109490.1| Zea mays CL920_1 mRNA sequence
          Length = 2298

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 162/206 (78%)
 Strand = Plus / Minus

                                                                        
Query: 368  ggaggcgtgaactcgatgttccagaatggcctcgccatgagaaggagctcgaggcctgct 427
            ||||| || ||||| ||||||||||| ||||| |||||||| | ||| ||  |||| | |
Sbjct: 1865 ggaggtgtaaactctatgttccagaagggccttgccatgagcatgaggtctcggccggtt 1806

                                                                        
Query: 428  ggggaggccttatagccttgcacccatatgtacctgagcgacggcatatggagcaccgcg 487
             | || || || ||||| || ||||||| |||||| || || |||||||| || |  || 
Sbjct: 1805 tgagacgctttgtagccctgaacccatacgtacctcagggaaggcatatgtagtattgca 1746

                                                                        
Query: 488  agggaaagagcttgctcgctgaagcagcagctccgaagctcaagcttccgcaggttggtg 547
            ||||  || ||| |||||||||||||||| ||||  || |||||||| ||||||||   |
Sbjct: 1745 agggccagtgctcgctcgctgaagcagcaactcctgagttcaagctttcgcaggtttacg 1686

                                      
Query: 548  catccgattgcgaagcggatcaatcc 573
            || || | |||||||| |||||||||
Sbjct: 1685 caacccaatgcgaagctgatcaatcc 1660
to top
>gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1122D01,
             complete sequence
          Length = 126532

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 496   agcttgctcgctgaagcagcagctccgaagctcaagcttccgcaggtt 543
             ||||||||| |||||||| || ||||  ||||||||||||||||||||
Sbjct: 37225 agcttgctcactgaagcaacaactccttagctcaagcttccgcaggtt 37178



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 368   ggaggcgtgaactcgatgttccagaatggcctcgccatgag 408
             ||||| || ||||| ||||||||||| ||||| ||||||||
Sbjct: 37353 ggaggtgtaaactctatgttccagaagggcctggccatgag 37313
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                                
Query: 496      agcttgctcgctgaagcagcagctccgaagctcaagcttccgcaggtt 543
                ||||||||| |||||||| || ||||  ||||||||||||||||||||
Sbjct: 21918011 agcttgctcactgaagcaacaactccttagctcaagcttccgcaggtt 21917964



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 368      ggaggcgtgaactcgatgttccagaatggcctcgccatgag 408
                ||||| || ||||| ||||||||||| ||||| ||||||||
Sbjct: 21918139 ggaggtgtaaactctatgttccagaagggcctggccatgag 21918099
to top
>dbj|AK101514.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046F05, full
            insert sequence
          Length = 2305

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 496  agcttgctcgctgaagcagcagctccgaagctcaagcttccgcaggtt 543
            ||||||||| |||||||| || ||||  ||||||||||||||||||||
Sbjct: 1741 agcttgctcactgaagcaacaactccttagctcaagcttccgcaggtt 1694
to top
>gb|AC161171.5| Mus musculus chromosome 3, clone RP24-326F21, complete sequence
          Length = 153637

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 179   atacgtacgtacgtacacacaacttg 204
             ||||||||||||||||| ||||||||
Sbjct: 43407 atacgtacgtacgtacatacaacttg 43382
to top
>gb|L06434.2|RATNEUROTR Rattus norvegicus NTT4 (Ntt4) mRNA, complete cds
          Length = 6411

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 179  atacgtacgtacgtacacaca 199
            |||||||||||||||||||||
Sbjct: 4153 atacgtacgtacgtacacaca 4173
to top
>gb|AC182436.1| Mus musculus chromosome 5, clone wi1-1982K15, complete sequence
          Length = 43869

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 179   atacgtacgtacgtacacaca 199
             |||||||||||||||||||||
Sbjct: 17154 atacgtacgtacgtacacaca 17134
to top
>ref|NM_001033079.1| Rattus norvegicus solute carrier family 6 (neurotransmitter
            transporter), member 17 (Slc6a17), mRNA
          Length = 6411

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 179  atacgtacgtacgtacacaca 199
            |||||||||||||||||||||
Sbjct: 4153 atacgtacgtacgtacacaca 4173
to top
>dbj|AK080705.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
            clone:A930006A15 product:weakly similar to GLUTAMIC-ACID
            RICH PROTEIN [Rattus norvegicus], full insert sequence
          Length = 2564

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 179  atacgtacgtacgtacacaca 199
            |||||||||||||||||||||
Sbjct: 1532 atacgtacgtacgtacacaca 1512
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 181     acgtacgtacgtacacacaac 201
               |||||||||||||||||||||
Sbjct: 3527471 acgtacgtacgtacacacaac 3527451
to top
>emb|AL954242.1|PTB109N16 Pan troglodytes chromosome 22 BAC PTB-109N16, complete sequence
          Length = 190477

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 307   ggcttgcctctccccacaggg 327
             |||||||||||||||||||||
Sbjct: 85416 ggcttgcctctccccacaggg 85396
to top
>gb|AC104742.9| Mus musculus chromosome 5, clone RP24-334A12, complete sequence
          Length = 117378

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 179   atacgtacgtacgtacacaca 199
             |||||||||||||||||||||
Sbjct: 32789 atacgtacgtacgtacacaca 32809
to top
>dbj|AP001752.1| Homo sapiens genomic DNA, chromosome 21q, section 96/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 307    ggcttgcctctccccacaggg 327
              |||||||||||||||||||||
Sbjct: 117351 ggcttgcctctccccacaggg 117331
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 181     acgtacgtacgtacacacaac 201
               |||||||||||||||||||||
Sbjct: 3527416 acgtacgtacgtacacacaac 3527396
to top
>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 103647

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 181   acgtacgtacgtacacacaac 201
             |||||||||||||||||||||
Sbjct: 42399 acgtacgtacgtacacacaac 42379
to top
>emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494_F10 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 116371

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 181  acgtacgtacgtacacacaac 201
            |||||||||||||||||||||
Sbjct: 4445 acgtacgtacgtacacacaac 4465
to top
>gb|AC102518.11| Mus musculus chromosome 8, clone RP24-502J8, complete sequence
          Length = 199824

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 179   atacgtacgtacgtacacaca 199
             |||||||||||||||||||||
Sbjct: 26814 atacgtacgtacgtacacaca 26794
to top
>dbj|AP001052.1| Homo sapiens genomic DNA, chromosome 21, clone:KB22A5, MX1-D21S171
             region, complete sequence
          Length = 145540

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 307   ggcttgcctctccccacaggg 327
             |||||||||||||||||||||
Sbjct: 95530 ggcttgcctctccccacaggg 95510
to top
>gb|AC091775.10| Oryza sativa chromosome 3 BAC OSJNBa0004G17 genomic sequence, complete
             sequence
          Length = 139074

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 87    agggcatataaaagcagctagcta 110
             |||||||||||||| |||||||||
Sbjct: 16409 agggcatataaaagtagctagcta 16386
to top
>gb|AC116505.13| Mus musculus chromosome 5, clone RP24-302O2, complete sequence
          Length = 178695

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 180    tacgtacgtacgtacacaca 199
              ||||||||||||||||||||
Sbjct: 134967 tacgtacgtacgtacacaca 134948
to top
>gb|AC163094.5| Mus musculus chromosome 5, clone RP23-123P10, complete sequence
          Length = 208850

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 210    ctgtatttacaatcaatcat 229
              ||||||||||||||||||||
Sbjct: 159334 ctgtatttacaatcaatcat 159353
to top
>gb|AC154354.2| Mus musculus BAC clone RP23-203C5 from chromosome 14, complete
            sequence
          Length = 238278

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 91   catataaaagcagctagcta 110
            ||||||||||||||||||||
Sbjct: 7859 catataaaagcagctagcta 7878
to top
>gb|AC165273.2| Mus musculus BAC clone RP24-267I1 from chromosome 13, complete sequence
          Length = 190600

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 194   cacacaacttgatgtcctgt 213
             ||||||||||||||||||||
Sbjct: 71685 cacacaacttgatgtcctgt 71704
to top
>gb|AC113063.8| Mus musculus chromosome 15, clone RP23-261F24, complete sequence
          Length = 218490

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 180   tacgtacgtacgtacacaca 199
             ||||||||||||||||||||
Sbjct: 10043 tacgtacgtacgtacacaca 10062
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 87       agggcatataaaagcagctagcta 110
                |||||||||||||| |||||||||
Sbjct: 28136696 agggcatataaaagtagctagcta 28136719
to top
>gb|AC122025.3| Mus musculus BAC clone RP24-388G8 from 12, complete sequence
          Length = 202612

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 180    tacgtacgtacgtacacaca 199
              ||||||||||||||||||||
Sbjct: 134762 tacgtacgtacgtacacaca 134743
to top
>gb|DQ378878.1| Cyprinus carpio clone LiC-12 microsatellite sequence
          Length = 310

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 488 agggaaagagcttgctcgct 507
           ||||||||||||||||||||
Sbjct: 10  agggaaagagcttgctcgct 29
to top
>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome
          Length = 1315030

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    caaattaccatattcagaca 146
              ||||||||||||||||||||
Sbjct: 523933 caaattaccatattcagaca 523914
to top
>emb|Z85994.1|HS32I10 Human DNA sequence from clone RP1-32I10 on chromosome 22, complete
             sequence
          Length = 93312

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 419   aggcctgctggggaggcctt 438
             ||||||||||||||||||||
Sbjct: 92902 aggcctgctggggaggcctt 92883
to top
>gb|AC114543.10| Mus musculus, clone RP24-107C11, complete sequence
          Length = 191639

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 262    gcagtcctgcctctgcccagcaagggag 289
              |||| ||||||||||||||| |||||||
Sbjct: 129394 gcagccctgcctctgcccagtaagggag 129421
to top
>gb|AC023049.14| Homo sapiens 3 BAC RP11-468F18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 117951

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    acacctcagctacagcacta 68
             ||||||||||||||||||||
Sbjct: 83009 acacctcagctacagcacta 82990
to top
>gb|AC175112.5| Mus musculus chromosome 5, clone wi1-1409A7, complete sequence
          Length = 38028

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   ctgtatttacaatcaatcat 229
             ||||||||||||||||||||
Sbjct: 37279 ctgtatttacaatcaatcat 37298
to top
>gb|AC154328.2| Mus musculus BAC clone RP23-298N23 from chromosome 13, complete
             sequence
          Length = 182025

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 180   tacgtacgtacgtacacaca 199
             ||||||||||||||||||||
Sbjct: 67425 tacgtacgtacgtacacaca 67406
to top
>gb|AC116801.9| Mus musculus chromosome 8, clone RP24-337F7, complete sequence
          Length = 168297

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 180   tacgtacgtacgtacacaca 199
             ||||||||||||||||||||
Sbjct: 61762 tacgtacgtacgtacacaca 61743
to top
>gb|AC158388.2| Mus musculus BAC clone RP24-545I9 from chromosome 14, complete sequence
          Length = 183148

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    catataaaagcagctagcta 110
             ||||||||||||||||||||
Sbjct: 36526 catataaaagcagctagcta 36507
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 180     tacgtacgtacgtacacaca 199
               ||||||||||||||||||||
Sbjct: 9990855 tacgtacgtacgtacacaca 9990874
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 87       agggcatataaaagcagctagcta 110
                |||||||||||||| |||||||||
Sbjct: 28228020 agggcatataaaagtagctagcta 28228043
to top
>gb|AC156995.6| Mus musculus chromosome 5, clone RP23-77E18, complete sequence
          Length = 138507

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 210    ctgtatttacaatcaatcat 229
              ||||||||||||||||||||
Sbjct: 114688 ctgtatttacaatcaatcat 114669
to top
>gb|AC138553.3| Ornithorhynchus anatinus clone OA_Bb-524H4, complete sequence
          Length = 144677

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 486   cgagggaaagagcttgctcg 505
             ||||||||||||||||||||
Sbjct: 24857 cgagggaaagagcttgctcg 24876
to top
>dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0480E02
          Length = 141862

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    ataaaagcagctagctaatg 113
             ||||||||||||||||||||
Sbjct: 11894 ataaaagcagctagctaatg 11875
to top
>dbj|AP006158.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1127C04
          Length = 121441

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 180   tacgtacgtacgtacacaca 199
             ||||||||||||||||||||
Sbjct: 30757 tacgtacgtacgtacacaca 30776
to top
>dbj|AP005697.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBb0005C03
          Length = 166423

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 180    tacgtacgtacgtacacaca 199
              ||||||||||||||||||||
Sbjct: 138102 tacgtacgtacgtacacaca 138121
to top
>gb|AC121108.12| Mus musculus chromosome 3, clone RP24-417H10, complete sequence
          Length = 184753

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   gtcacccagtcagggcagtc 267
             ||||||||||||||||||||
Sbjct: 78671 gtcacccagtcagggcagtc 78690
to top
>gb|AC153866.6| Mus musculus 10 BAC RP23-350O24 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 184984

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 180   tacgtacgtacgtacacaca 199
             ||||||||||||||||||||
Sbjct: 70385 tacgtacgtacgtacacaca 70366
to top
>emb|AL929003.17| Zebrafish DNA sequence from clone DKEY-235D18 in linkage group 20,
              complete sequence
          Length = 175099

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    tgtatttacaatcaatcatg 230
              ||||||||||||||||||||
Sbjct: 132369 tgtatttacaatcaatcatg 132388
to top
>gb|AC118008.14| Mus musculus chromosome 15, clone RP23-435B2, complete sequence
          Length = 204342

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 180   tacgtacgtacgtacacaca 199
             ||||||||||||||||||||
Sbjct: 15465 tacgtacgtacgtacacaca 15446
to top
>gb|U19269.1|DMU19269 Drosophila melanogaster Dachshund (dachshund) mRNA, and
           alternatively spliced Dachshund variants 1,2,3 and 4
           mRNA, complete cds
          Length = 4976

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 179 atacgtacgtacgtacacac 198
           ||||||||||||||||||||
Sbjct: 91  atacgtacgtacgtacacac 72
to top
>emb|AL627405.17| Mouse DNA sequence from clone RP23-183D11 on chromosome 4, complete
           sequence
          Length = 193847

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 180 tacgtacgtacgtacacaca 199
           ||||||||||||||||||||
Sbjct: 348 tacgtacgtacgtacacaca 329
to top
>emb|AL670227.7| Mouse DNA sequence from clone RP23-317N1 on chromosome 4, complete
              sequence
          Length = 219973

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 180    tacgtacgtacgtacacaca 199
              ||||||||||||||||||||
Sbjct: 218771 tacgtacgtacgtacacaca 218752


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,427,464
Number of Sequences: 3902068
Number of extensions: 4427464
Number of successful extensions: 89841
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89416
Number of HSP's gapped (non-prelim): 405
length of query: 612
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 589
effective length of database: 17,143,297,704
effective search space: 10097402347656
effective search space used: 10097402347656
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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