| Clone Name | rbags7p23 |
|---|---|
| Clone Library Name | barley_pub |
>MRP1_ARATH (Q9C8G9) Multidrug resistance-associated protein 1 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 1) (ATP-energized glutathione S-conjugate pump 1) Length = 1622 Score = 120 bits (301), Expect = 4e-27 Identities = 60/125 (48%), Positives = 80/125 (64%), Gaps = 1/125 (0%) Frame = -2 Query: 660 EESKLQDIQRKWAASNRWXXXXXXXXXXXXXXXXXXXXXLEVAEGNSILRKTKDAVITLQ 481 ++S+ + QRKW AS+RW LE+ + NSIL+KTKDAV+TL+ Sbjct: 1497 DDSQPLEGQRKWQASSRWAAAAQFALAVSLTSSHNDLQSLEIEDDNSILKKTKDAVVTLR 1556 Query: 480 SVLEGKHNTEIEESLTEYQVPPDRWWSSLYKVIEGLATMSKLGRNRRQ-PGYSFENHGSI 304 SVLEGKH+ EIE+SL + + +RWW SLYK++EGLA MS+L RNR Q P Y+ E S Sbjct: 1557 SVLEGKHDKEIEDSLNQSDISRERWWPSLYKMVEGLAVMSRLARNRMQHPDYNLEGK-SF 1615 Query: 303 DWDQI 289 DWD + Sbjct: 1616 DWDNV 1620
>MRP2_ARATH (Q42093) Multidrug resistance-associated protein 2 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 2) (ATP-energized glutathione S-conjugate pump 2) Length = 1623 Score = 113 bits (283), Expect = 5e-25 Identities = 57/131 (43%), Positives = 82/131 (62%), Gaps = 1/131 (0%) Frame = -2 Query: 678 EERLRKEESKLQDIQRKWAASNRWXXXXXXXXXXXXXXXXXXXXXLEVAEGNSILRKTKD 499 + + K++S QRKW AS+RW LE+ + +SIL++T D Sbjct: 1492 DNKRAKDDSHHLQGQRKWLASSRWAAAAQFALAASLTSSHNDLQSLEIEDDSSILKRTND 1551 Query: 498 AVITLQSVLEGKHNTEIEESLTEYQVPPDRWWSSLYKVIEGLATMSKLGRNR-RQPGYSF 322 AV+TL+SVLEGKH+ EI ESL E+ + + W SSLY+++EGLA MS+L RNR +QP Y+F Sbjct: 1552 AVVTLRSVLEGKHDKEIAESLEEHNISREGWLSSLYRMVEGLAVMSRLARNRMQQPDYNF 1611 Query: 321 ENHGSIDWDQI 289 E + + DWD + Sbjct: 1612 EGN-TFDWDNV 1621
>LTBP2_MOUSE (O08999) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1813 Score = 32.0 bits (71), Expect = 1.8 Identities = 17/58 (29%), Positives = 27/58 (46%) Frame = +3 Query: 261 ALQCQCSTPKFDPSQ*TRGFQNCNQVADGCDPVCSSWRGLR*LCKVTTTTYQVEPDTQ 434 + C C T F PS + + ++ D DPVC +WR C+ + +Y+ D Q Sbjct: 1230 SFSCLCETASFQPSPDSGECLDIDECEDREDPVCGAWR-----CENSPGSYRCILDCQ 1282
>SYR1_BACHD (Q9K6C1) Arginyl-tRNA synthetase 1 (EC 6.1.1.19) (Arginine--tRNA| ligase 1) (ArgRS 1) Length = 556 Score = 30.8 bits (68), Expect = 4.0 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 8/76 (10%) Frame = -2 Query: 453 EIEESLTEYQVPPDRWWS--SLY---KVIEGLATMSKLGRNRRQPG---YSFENHGSIDW 298 +I+ L E++VP D W+S SLY KV + L + + G+ Q G + +G D Sbjct: 245 KIKSDLEEFRVPFDNWYSETSLYTTGKVEKTLNVLKEKGKTYEQDGALWFRSTEYGD-DK 303 Query: 297 DQI*VLNTGIAMLLNP 250 D++ V N G L P Sbjct: 304 DRVLVKNDGSYTYLTP 319
>VPS16_MOUSE (Q920Q4) Vacuolar protein sorting 16 (mVPS16)| Length = 839 Score = 29.6 bits (65), Expect = 8.8 Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Frame = -2 Query: 489 TLQSVLEGKHNTEIEESLTEYQVPPDR-WWSSLYKV--IEGLATMSKLGRNRRQP-GY 328 T+ +++ G HN E+ ++++P R WW L + +E + K ++++ P GY Sbjct: 699 TVTTLILGGHNKRAEQLARDFRIPDKRLWWLKLAALADLEDWEELEKFSKSKKSPIGY 756
>VPS16_HUMAN (Q9H269) Vacuolar protein sorting 16 (hVPS16)| Length = 839 Score = 29.6 bits (65), Expect = 8.8 Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Frame = -2 Query: 489 TLQSVLEGKHNTEIEESLTEYQVPPDR-WWSSLYKV--IEGLATMSKLGRNRRQP-GY 328 T+ +++ G HN E+ ++++P R WW L + +E + K ++++ P GY Sbjct: 699 TVTTLILGGHNKRAEQLARDFRIPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGY 756 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 97,338,985 Number of Sequences: 219361 Number of extensions: 1969673 Number of successful extensions: 4537 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 4410 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4536 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6655306086 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)