| Clone Name | rbags7p21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473753.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1425 Score = 351 bits (177), Expect = 2e-93 Identities = 330/381 (86%) Strand = Plus / Minus Query: 263 tgcagacttgggagcatcaggagtcccaaacacattccagaagcgcagggtctcgtctgc 322 ||||| |||||| || ||||||| |||||| || |||||||| | ||||||||| ||||| Sbjct: 1368 tgcagtcttgggtgcttcaggagccccaaatacgttccagaatctcagggtctcatctgc 1309 Query: 323 ggccgcagatgccaccgtgcaaccatcagggctctgagccatgaagaggacacgggaagt 382 || |||||||| || ||| ||||||||||||||||||| |||| |||||||| || || Sbjct: 1308 tgcagcagatgctactgtgagaccatcagggctctgagccgtgaaaaggacacgagaggt 1249 Query: 383 atggccattgagctcggccatcttagtcatcgacgggtacttccacaacgtgagctggtt 442 ||||||| |||| || ||||||||| ||| ||||||||||||||||| |||||||| || Sbjct: 1248 atggccagtgagttcagccatcttaaccattgacgggtacttccacaaagtgagctgatt 1189 Query: 443 ctgagtgaatccatgcgagctcaacagctctctgtcgttcttgttccagagcagtgcgca 502 ||||| ||||||||| ||||| | ||||||||| || ||||||||||||| ||| | ||| Sbjct: 1188 ctgagcgaatccatgtgagcttagcagctctctctcattcttgttccagaccagcgagca 1129 Query: 503 cacttgtgacccggtgtcgactgagttgaggcatgcgcccgtgtgtgtgttccagaactt 562 |||||||||||| ||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 1128 cacttgtgacccagtgtcgatcgagttgaggcatgcgccggtatgtgtgttccagaactt 1069 Query: 563 gatgcaacggtcatttgcgccaccacctgatgccagcaggttgctctggaacgggcacca 622 |||||| |||||| | | |||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1068 gatgcaccggtcactcccaccaccaccagatgccagcaggttgctctggaatgggcacca 1009 Query: 623 tgcaagcgccttcacagcagc 643 || || |||||||||||||| Sbjct: 1008 cgcgagagccttcacagcagc 988
>ref|XM_467317.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2262 Score = 323 bits (163), Expect = 4e-85 Identities = 325/379 (85%) Strand = Plus / Minus Query: 262 ctgcagacttgggagcatcaggagtcccaaacacattccagaagcgcagggtctcgtctg 321 |||||| |||||| || |||||| | ||||||||||||||||| ||||||||||| |||| Sbjct: 1674 ctgcaggcttgggggcttcaggactaccaaacacattccagaaccgcagggtctcatctg 1615 Query: 322 cggccgcagatgccaccgtgcaaccatcagggctctgagccatgaagaggacacgggaag 381 | || || ||||| || |||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 1614 cagcagccgatgctactgtgcaaccatcaggactctgagccatgaaaaggacacgggaag 1555 Query: 382 tatggccattgagctcggccatcttagtcatcgacgggtacttccacaacgtgagctggt 441 |||||||| |||| || ||||||||| ||||||||||||||||||||| || ||||||| Sbjct: 1554 tatggccagtgagttcagccatcttaaccatcgacgggtacttccacaatgtcagctggt 1495 Query: 442 tctgagtgaatccatgcgagctcaacagctctctgtcgttcttgttccagagcagtgcgc 501 |||| |||||||| || || |||| |||||||| || || |||||||| || || |||| Sbjct: 1494 tctgcgtgaatccgtgtgaactcagaagctctctctcatttttgttccatagaagagcgc 1435 Query: 502 acacttgtgacccggtgtcgactgagttgaggcatgcgcccgtgtgtgtgttccagaact 561 |||| || || ||||| ||||| ||||| | |||||| || ||||||||||||||||||| Sbjct: 1434 acacctgcgatccggtatcgacagagttcaagcatgcaccggtgtgtgtgttccagaact 1375 Query: 562 tgatgcaacggtcatttgcgccaccacctgatgccagcaggttgctctggaacgggcacc 621 ||||||| ||||| | | ||||| || | ||| ||||||||||||||||| ||||||| Sbjct: 1374 tgatgcaccggtcgctaccaccacctccagttgcaagcaggttgctctggaatgggcacc 1315 Query: 622 atgcaagcgccttcacagc 640 |||||||||| |||||||| Sbjct: 1314 atgcaagcgctttcacagc 1296
>dbj|AK102954.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115E13, full insert sequence Length = 2262 Score = 323 bits (163), Expect = 4e-85 Identities = 325/379 (85%) Strand = Plus / Minus Query: 262 ctgcagacttgggagcatcaggagtcccaaacacattccagaagcgcagggtctcgtctg 321 |||||| |||||| || |||||| | ||||||||||||||||| ||||||||||| |||| Sbjct: 1674 ctgcaggcttgggggcttcaggactaccaaacacattccagaaccgcagggtctcatctg 1615 Query: 322 cggccgcagatgccaccgtgcaaccatcagggctctgagccatgaagaggacacgggaag 381 | || || ||||| || |||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 1614 cagcagccgatgctactgtgcaaccatcaggactctgagccatgaaaaggacacgggaag 1555 Query: 382 tatggccattgagctcggccatcttagtcatcgacgggtacttccacaacgtgagctggt 441 |||||||| |||| || ||||||||| ||||||||||||||||||||| || ||||||| Sbjct: 1554 tatggccagtgagttcagccatcttaaccatcgacgggtacttccacaatgtcagctggt 1495 Query: 442 tctgagtgaatccatgcgagctcaacagctctctgtcgttcttgttccagagcagtgcgc 501 |||| |||||||| || || |||| |||||||| || || |||||||| || || |||| Sbjct: 1494 tctgcgtgaatccgtgtgaactcagaagctctctctcatttttgttccatagaagagcgc 1435 Query: 502 acacttgtgacccggtgtcgactgagttgaggcatgcgcccgtgtgtgtgttccagaact 561 |||| || || ||||| ||||| ||||| | |||||| || ||||||||||||||||||| Sbjct: 1434 acacctgcgatccggtatcgacagagttcaagcatgcaccggtgtgtgtgttccagaact 1375 Query: 562 tgatgcaacggtcatttgcgccaccacctgatgccagcaggttgctctggaacgggcacc 621 ||||||| ||||| | | ||||| || | ||| ||||||||||||||||| ||||||| Sbjct: 1374 tgatgcaccggtcgctaccaccacctccagttgcaagcaggttgctctggaatgggcacc 1315 Query: 622 atgcaagcgccttcacagc 640 |||||||||| |||||||| Sbjct: 1314 atgcaagcgctttcacagc 1296
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 285 bits (144), Expect = 9e-74 Identities = 252/288 (87%) Strand = Plus / Minus Query: 356 ctgagccatgaagaggacacgggaagtatggccattgagctcggccatcttagtcatcga 415 ||||||| |||| |||||||| || ||||||||| |||| || ||||||||| ||| || Sbjct: 30303974 ctgagccgtgaaaaggacacgagaggtatggccagtgagttcagccatcttaaccattga 30303915 Query: 416 cgggtacttccacaacgtgagctggttctgagtgaatccatgcgagctcaacagctctct 475 ||||||||||||||| |||||||| ||||||| ||||||||| ||||| | ||||||||| Sbjct: 30303914 cgggtacttccacaaagtgagctgattctgagcgaatccatgtgagcttagcagctctct 30303855 Query: 476 gtcgttcttgttccagagcagtgcgcacacttgtgacccggtgtcgactgagttgaggca 535 || ||||||||||||| ||| | ||||||||||||||| ||||||| ||||||||||| Sbjct: 30303854 ctcattcttgttccagaccagcgagcacacttgtgacccagtgtcgatcgagttgaggca 30303795 Query: 536 tgcgcccgtgtgtgtgttccagaacttgatgcaacggtcatttgcgccaccacctgatgc 595 |||||| || ||||||||||||||||||||||| |||||| | | |||||||| ||||| Sbjct: 30303794 tgcgccggtatgtgtgttccagaacttgatgcaccggtcactcccaccaccaccagatgc 30303735 Query: 596 cagcaggttgctctggaacgggcaccatgcaagcgccttcacagcagc 643 |||||||||||||||||| |||||||| || || |||||||||||||| Sbjct: 30303734 cagcaggttgctctggaatgggcaccacgcgagagccttcacagcagc 30303687 Score = 71.9 bits (36), Expect = 3e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 263 tgcagacttgggagcatcaggagtcccaaacacattccagaagcgcagggtctcgtctgc 322 ||||| |||||| || ||||||| |||||| || |||||||| | ||||||||| ||||| Sbjct: 30304157 tgcagtcttgggtgcttcaggagccccaaatacgttccagaatctcagggtctcatctgc 30304098 Query: 323 ggccgcagatgccaccgtgcaaccatcagggctctg 358 || |||||||| || ||| ||||||||||||||| Sbjct: 30304097 tgcagcagatgctactgtgagaccatcagggctctg 30304062
>dbj|AK103675.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136B14, full insert sequence Length = 2568 Score = 285 bits (144), Expect = 9e-74 Identities = 252/288 (87%) Strand = Plus / Minus Query: 356 ctgagccatgaagaggacacgggaagtatggccattgagctcggccatcttagtcatcga 415 ||||||| |||| |||||||| || ||||||||| |||| || ||||||||| ||| || Sbjct: 1834 ctgagccgtgaaaaggacacgagaggtatggccagtgagttcagccatcttaaccattga 1775 Query: 416 cgggtacttccacaacgtgagctggttctgagtgaatccatgcgagctcaacagctctct 475 ||||||||||||||| |||||||| ||||||| ||||||||| ||||| | ||||||||| Sbjct: 1774 cgggtacttccacaaagtgagctgattctgagcgaatccatgtgagcttagcagctctct 1715 Query: 476 gtcgttcttgttccagagcagtgcgcacacttgtgacccggtgtcgactgagttgaggca 535 || ||||||||||||| ||| | ||||||||||||||| ||||||| ||||||||||| Sbjct: 1714 ctcattcttgttccagaccagcgagcacacttgtgacccagtgtcgatcgagttgaggca 1655 Query: 536 tgcgcccgtgtgtgtgttccagaacttgatgcaacggtcatttgcgccaccacctgatgc 595 |||||| || ||||||||||||||||||||||| |||||| | | |||||||| ||||| Sbjct: 1654 tgcgccggtatgtgtgttccagaacttgatgcaccggtcactcccaccaccaccagatgc 1595 Query: 596 cagcaggttgctctggaacgggcaccatgcaagcgccttcacagcagc 643 |||||||||||||||||| |||||||| || || |||||||||||||| Sbjct: 1594 cagcaggttgctctggaatgggcaccacgcgagagccttcacagcagc 1547 Score = 71.9 bits (36), Expect = 3e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 263 tgcagacttgggagcatcaggagtcccaaacacattccagaagcgcagggtctcgtctgc 322 ||||| |||||| || ||||||| |||||| || |||||||| | ||||||||| ||||| Sbjct: 2017 tgcagtcttgggtgcttcaggagccccaaatacgttccagaatctcagggtctcatctgc 1958 Query: 323 ggccgcagatgccaccgtgcaaccatcagggctctg 358 || |||||||| || ||| ||||||||||||||| Sbjct: 1957 tgcagcagatgctactgtgagaccatcagggctctg 1922
>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12, complete sequence Length = 160989 Score = 285 bits (144), Expect = 9e-74 Identities = 252/288 (87%) Strand = Plus / Minus Query: 356 ctgagccatgaagaggacacgggaagtatggccattgagctcggccatcttagtcatcga 415 ||||||| |||| |||||||| || ||||||||| |||| || ||||||||| ||| || Sbjct: 53870 ctgagccgtgaaaaggacacgagaggtatggccagtgagttcagccatcttaaccattga 53811 Query: 416 cgggtacttccacaacgtgagctggttctgagtgaatccatgcgagctcaacagctctct 475 ||||||||||||||| |||||||| ||||||| ||||||||| ||||| | ||||||||| Sbjct: 53810 cgggtacttccacaaagtgagctgattctgagcgaatccatgtgagcttagcagctctct 53751 Query: 476 gtcgttcttgttccagagcagtgcgcacacttgtgacccggtgtcgactgagttgaggca 535 || ||||||||||||| ||| | ||||||||||||||| ||||||| ||||||||||| Sbjct: 53750 ctcattcttgttccagaccagcgagcacacttgtgacccagtgtcgatcgagttgaggca 53691 Query: 536 tgcgcccgtgtgtgtgttccagaacttgatgcaacggtcatttgcgccaccacctgatgc 595 |||||| || ||||||||||||||||||||||| |||||| | | |||||||| ||||| Sbjct: 53690 tgcgccggtatgtgtgttccagaacttgatgcaccggtcactcccaccaccaccagatgc 53631 Query: 596 cagcaggttgctctggaacgggcaccatgcaagcgccttcacagcagc 643 |||||||||||||||||| |||||||| || || |||||||||||||| Sbjct: 53630 cagcaggttgctctggaatgggcaccacgcgagagccttcacagcagc 53583 Score = 71.9 bits (36), Expect = 3e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 263 tgcagacttgggagcatcaggagtcccaaacacattccagaagcgcagggtctcgtctgc 322 ||||| |||||| || ||||||| |||||| || |||||||| | ||||||||| ||||| Sbjct: 54053 tgcagtcttgggtgcttcaggagccccaaatacgttccagaatctcagggtctcatctgc 53994 Query: 323 ggccgcagatgccaccgtgcaaccatcagggctctg 358 || |||||||| || ||| ||||||||||||||| Sbjct: 53993 tgcagcagatgctactgtgagaccatcagggctctg 53958
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 240 bits (121), Expect = 5e-60 Identities = 244/285 (85%) Strand = Plus / Minus Query: 356 ctgagccatgaagaggacacgggaagtatggccattgagctcggccatcttagtcatcga 415 |||||||||||| ||||||||||||||||||||| |||| || ||||||||| |||||| Sbjct: 28823246 ctgagccatgaaaaggacacgggaagtatggccagtgagttcagccatcttaaccatcga 28823187 Query: 416 cgggtacttccacaacgtgagctggttctgagtgaatccatgcgagctcaacagctctct 475 ||||||||||||||| || ||||||||||| |||||||| || || |||| |||||||| Sbjct: 28823186 cgggtacttccacaatgtcagctggttctgcgtgaatccgtgtgaactcagaagctctct 28823127 Query: 476 gtcgttcttgttccagagcagtgcgcacacttgtgacccggtgtcgactgagttgaggca 535 || || |||||||| || || |||||||| || || ||||| ||||| ||||| | ||| Sbjct: 28823126 ctcatttttgttccatagaagagcgcacacctgcgatccggtatcgacagagttcaagca 28823067 Query: 536 tgcgcccgtgtgtgtgttccagaacttgatgcaacggtcatttgcgccaccacctgatgc 595 ||| || |||||||||||||||||||||||||| ||||| | | ||||| || | ||| Sbjct: 28823066 tgcaccggtgtgtgtgttccagaacttgatgcaccggtcgctaccaccacctccagttgc 28823007 Query: 596 cagcaggttgctctggaacgggcaccatgcaagcgccttcacagc 640 ||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 28823006 aagcaggttgctctggaatgggcaccatgcaagcgctttcacagc 28822962 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 262 ctgcagacttgggagcatcaggagtcccaaacacattccagaagcgcagggtctcgtctg 321 |||||| |||||| || |||||| | ||||||||||||||||| ||||||||||| |||| Sbjct: 28823429 ctgcaggcttgggggcttcaggactaccaaacacattccagaaccgcagggtctcatctg 28823370 Query: 322 cggccgcagatgccaccgtgcaaccatcagggctctg 358 | || || ||||| || |||||||||||||| ||||| Sbjct: 28823369 cagcagccgatgctactgtgcaaccatcaggactctg 28823333
>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0459B01 Length = 163087 Score = 240 bits (121), Expect = 5e-60 Identities = 244/285 (85%) Strand = Plus / Minus Query: 356 ctgagccatgaagaggacacgggaagtatggccattgagctcggccatcttagtcatcga 415 |||||||||||| ||||||||||||||||||||| |||| || ||||||||| |||||| Sbjct: 139819 ctgagccatgaaaaggacacgggaagtatggccagtgagttcagccatcttaaccatcga 139760 Query: 416 cgggtacttccacaacgtgagctggttctgagtgaatccatgcgagctcaacagctctct 475 ||||||||||||||| || ||||||||||| |||||||| || || |||| |||||||| Sbjct: 139759 cgggtacttccacaatgtcagctggttctgcgtgaatccgtgtgaactcagaagctctct 139700 Query: 476 gtcgttcttgttccagagcagtgcgcacacttgtgacccggtgtcgactgagttgaggca 535 || || |||||||| || || |||||||| || || ||||| ||||| ||||| | ||| Sbjct: 139699 ctcatttttgttccatagaagagcgcacacctgcgatccggtatcgacagagttcaagca 139640 Query: 536 tgcgcccgtgtgtgtgttccagaacttgatgcaacggtcatttgcgccaccacctgatgc 595 ||| || |||||||||||||||||||||||||| ||||| | | ||||| || | ||| Sbjct: 139639 tgcaccggtgtgtgtgttccagaacttgatgcaccggtcgctaccaccacctccagttgc 139580 Query: 596 cagcaggttgctctggaacgggcaccatgcaagcgccttcacagc 640 ||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 139579 aagcaggttgctctggaatgggcaccatgcaagcgctttcacagc 139535 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 262 ctgcagacttgggagcatcaggagtcccaaacacattccagaagcgcagggtctcgtctg 321 |||||| |||||| || |||||| | ||||||||||||||||| ||||||||||| |||| Sbjct: 140002 ctgcaggcttgggggcttcaggactaccaaacacattccagaaccgcagggtctcatctg 139943 Query: 322 cggccgcagatgccaccgtgcaaccatcagggctctg 358 | || || ||||| || |||||||||||||| ||||| Sbjct: 139942 cagcagccgatgctactgtgcaaccatcaggactctg 139906
>dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1111_E07 Length = 123613 Score = 240 bits (121), Expect = 5e-60 Identities = 244/285 (85%) Strand = Plus / Minus Query: 356 ctgagccatgaagaggacacgggaagtatggccattgagctcggccatcttagtcatcga 415 |||||||||||| ||||||||||||||||||||| |||| || ||||||||| |||||| Sbjct: 15938 ctgagccatgaaaaggacacgggaagtatggccagtgagttcagccatcttaaccatcga 15879 Query: 416 cgggtacttccacaacgtgagctggttctgagtgaatccatgcgagctcaacagctctct 475 ||||||||||||||| || ||||||||||| |||||||| || || |||| |||||||| Sbjct: 15878 cgggtacttccacaatgtcagctggttctgcgtgaatccgtgtgaactcagaagctctct 15819 Query: 476 gtcgttcttgttccagagcagtgcgcacacttgtgacccggtgtcgactgagttgaggca 535 || || |||||||| || || |||||||| || || ||||| ||||| ||||| | ||| Sbjct: 15818 ctcatttttgttccatagaagagcgcacacctgcgatccggtatcgacagagttcaagca 15759 Query: 536 tgcgcccgtgtgtgtgttccagaacttgatgcaacggtcatttgcgccaccacctgatgc 595 ||| || |||||||||||||||||||||||||| ||||| | | ||||| || | ||| Sbjct: 15758 tgcaccggtgtgtgtgttccagaacttgatgcaccggtcgctaccaccacctccagttgc 15699 Query: 596 cagcaggttgctctggaacgggcaccatgcaagcgccttcacagc 640 ||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 15698 aagcaggttgctctggaatgggcaccatgcaagcgctttcacagc 15654 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 262 ctgcagacttgggagcatcaggagtcccaaacacattccagaagcgcagggtctcgtctg 321 |||||| |||||| || |||||| | ||||||||||||||||| ||||||||||| |||| Sbjct: 16121 ctgcaggcttgggggcttcaggactaccaaacacattccagaaccgcagggtctcatctg 16062 Query: 322 cggccgcagatgccaccgtgcaaccatcagggctctg 358 | || || ||||| || |||||||||||||| ||||| Sbjct: 16061 cagcagccgatgctactgtgcaaccatcaggactctg 16025
>gb|AY110985.1| Zea mays CL11432_1 mRNA sequence Length = 609 Score = 226 bits (114), Expect = 7e-56 Identities = 237/278 (85%) Strand = Plus / Plus Query: 297 ttccagaagcgcagggtctcgtctgcggccgcagatgccaccgtgcaaccatcagggctc 356 |||||||| || ||||||||||| || || || || || || ||||| |||||||| ||| Sbjct: 326 ttccagaaccggagggtctcgtcagcagcagctgacgctactgtgcatccatcaggactc 385 Query: 357 tgagccatgaagaggacacgggaagtatggccattgagctcggccatcttagtcatcgac 416 ||||||||||||||||| || || ||||||||||| || || |||||||| |||||| Sbjct: 386 tgagccatgaagaggacgcgagaggtatggccattaagttcagccatcttcaccatcgat 445 Query: 417 gggtacttccacaacgtgagctggttctgagtgaatccatgcgagctcaacagctctctg 476 |||||||||||||| ||||| |||||||| ||||||||||| ||||||| |||||| || Sbjct: 446 gggtacttccacaaggtgagttggttctgtgtgaatccatgtgagctcagcagctccctc 505 Query: 477 tcgttcttgttccagagcagtgcgcacacttgtgacccggtgtcgactgagttgaggcat 536 |||||||||||||| ||||| |||||||| ||||| ||||| || || ||||||||||| Sbjct: 506 tcgttcttgttccacagcagagcgcacacctgtgatccggtatcaaccgagttgaggcac 565 Query: 537 gcgcccgtgtgtgtgttccagaacttgatgcaacggtc 574 | || ||||| |||||||||||||||||||| ||||| Sbjct: 566 acaccggtgtgcgtgttccagaacttgatgcagcggtc 603
>gb|BT018609.1| Zea mays clone EL01N0450G05.d mRNA sequence Length = 1595 Score = 216 bits (109), Expect = 7e-53 Identities = 292/353 (82%) Strand = Plus / Minus Query: 288 ccaaacacattccagaagcgcagggtctcgtctgcggccgcagatgccaccgtgcaacca 347 ||||| || ||||||||||| |||||||| || || || || ||||| || ||||||||| Sbjct: 1004 ccaaatacgttccagaagcgaagggtctcatccgcagcggctgatgctactgtgcaacca 945 Query: 348 tcagggctctgagccatgaagaggacacgggaagtatggccattgagctcggccatctta 407 |||||||||||||||||||| |||||||| || ||||||||| |||| || |||||||| Sbjct: 944 tcagggctctgagccatgaaaaggacacgagaggtatggccactgagttcagccatcttt 885 Query: 408 gtcatcgacgggtacttccacaacgtgagctggttctgagtgaatccatgcgagctcaac 467 ||| || |||||||||||||| || || |||||||| |||||||| || ||||||| | Sbjct: 884 accattgatgggtacttccacaaggttagttggttctgtgtgaatccgtgtgagctcagc 825 Query: 468 agctctctgtcgttcttgttccagagcagtgcgcacacttgtgacccggtgtcgactgag 527 |||||||| || || |||||||| || || || || || ||||| || |||| || ||| Sbjct: 824 agctctctctcatttttgttccatagaagggcacagacctgtgatccagtgttaacagag 765 Query: 528 ttgaggcatgcgcccgtgtgtgtgttccagaacttgatgcaacggtcatttgcgccacca 587 || || ||||| || |||||||||||||||||||| ||||| | ||| | |||||||| Sbjct: 764 ttcagacatgctccagtgtgtgtgttccagaacttaatgcatctatcactgccgccacca 705 Query: 588 cctgatgccagcaggttgctctggaacgggcaccatgcaagcgccttcacagc 640 || | |||||||| |||||||||||| || ||||| || || ||||||||||| Sbjct: 704 ccagttgccagcaagttgctctggaaaggacaccacgcgagtgccttcacagc 652
>dbj|AP007293.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34C12, TM0361, complete sequence Length = 108947 Score = 101 bits (51), Expect = 3e-18 Identities = 228/287 (79%) Strand = Plus / Minus Query: 282 ggagtcccaaacacattccagaagcgcagggtctcgtctgcggccgcagatgccaccgtg 341 ||||| ||||| ||||||||||| || || ||||| || || || ||||| ||||| || Sbjct: 72440 ggagttccaaagacattccagaatcgaagagtctcatcagctgctgcagaggccacagta 72381 Query: 342 caaccatcagggctctgagccatgaagaggacacgggaagtatggccattgagctcggcc 401 || ||||| || |||||||||||| | || || | ||| ||||| ||||||||||| ||| Sbjct: 72380 cacccatctggactctgagccatgtacagcaccctggaggtatgaccattgagctctgcc 72321 Query: 402 atcttagtcatcgacgggtacttccacaacgtgagctggttctgagtgaatccatgcgag 461 ||||| ||| || ||||| ||||| | |||||||||||||| ||||| || |||||| Sbjct: 72320 atcttcagcatagaagggtatttccagagagtgagctggttctgggtgaaaccgtgcgag 72261 Query: 462 ctcaacagctctctgtcgttcttgttccagagcagtgcgcacacttgtgacccggtgtcg 521 || | || ||||| || ||||| |||| || || || ||||| || || || |||| | Sbjct: 72260 ctaagcaactctcgctcactcttgctccaaagaagggcacacacctgagagccagtgttg 72201 Query: 522 actgagttgaggcatgcgcccgtgtgtgtgttccagaacttgatgca 568 || | ||| |||||||| || || ||||||||||| ||||||||||| Sbjct: 72200 acagtgttcaggcatgcaccagtatgtgtgttccaaaacttgatgca 72154
>dbj|AP006703.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01O03, TM0588b, complete sequence Length = 45450 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 477 tcgttcttgttccagagcagtgcgcacacttgtgacccggtgtcgactgagttgaggcat 536 |||||||||||||| |||| | ||| ||||| ||||||||||| || ||||| | ||| Sbjct: 35076 tcgttcttgttccacagcaaggagcaaacttgagacccggtgtccacagagttcaagcaa 35135 Query: 537 gcgcccgtgtgtgtgttccagaacttgatgcaacg 571 ||||| |||||||||||||| |||||||||||||| Sbjct: 35136 gcgccggtgtgtgtgttccaaaacttgatgcaacg 35170
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 83.8 bits (42), Expect = 7e-13 Identities = 87/102 (85%) Strand = Plus / Minus Query: 543 gtgtgtgtgttccagaacttgatgcaacggtcatttgcgccaccacctgatgccagcagg 602 |||||||| ||||| ||| ||||||| || |||| | | |||||||| ||||| |||| Sbjct: 3116596 gtgtgtgtattccaaaacctgatgcaccgatcatctccaccaccaccagatgcaagcaaa 3116537 Query: 603 ttgctctggaacgggcaccatgcaagcgccttcacagcagct 644 |||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 3116536 ttgctctggaacggacaccatgcaagggccttcactgcagct 3116495
>dbj|AP005727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0038I09 Length = 153520 Score = 83.8 bits (42), Expect = 7e-13 Identities = 87/102 (85%) Strand = Plus / Minus Query: 543 gtgtgtgtgttccagaacttgatgcaacggtcatttgcgccaccacctgatgccagcagg 602 |||||||| ||||| ||| ||||||| || |||| | | |||||||| ||||| |||| Sbjct: 26259 gtgtgtgtattccaaaacctgatgcaccgatcatctccaccaccaccagatgcaagcaaa 26200 Query: 603 ttgctctggaacgggcaccatgcaagcgccttcacagcagct 644 |||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 26199 ttgctctggaacggacaccatgcaagggccttcactgcagct 26158
>gb|BT013238.1| Lycopersicon esculentum clone 134512F, mRNA sequence Length = 1805 Score = 77.8 bits (39), Expect = 4e-11 Identities = 294/379 (77%) Strand = Plus / Minus Query: 279 tcaggagtcccaaacacattccagaagcgcagggtctcgtctgcggccgcagatgccacc 338 |||||||| ||||| ||||||||||| | ||||| || ||| | || |||||||| || Sbjct: 1491 tcaggagtaccaaatacattccagaatctgagggtttcatctccagctgcagatgcaact 1432 Query: 339 gtgcaaccatcagggctctgagccatgaagaggacacgggaagtatggccattgagctcg 398 ||||||||||| || |||||||||||||| || || | || || |||||| | ||||| Sbjct: 1431 gtgcaaccatctggactctgagccatgaaaagtactctagatgtgtggccagttagctca 1372 Query: 399 gccatcttagtcatcgacgggtacttccacaacgtgagctggttctgagtgaatccatgc 458 || | |||| ||| || ||||| ||||| | |||||||| ||||||||||| ||||| Sbjct: 1371 gctaccttaaccatagaagggtatttccaaagggtgagctgattctgagtgaaaccatga 1312 Query: 459 gagctcaacagctctctgtcgttcttgttccagagcagtgcgcacacttgtgacccggtg 518 || || | |||||| | || ||||||||||| ||||| | || || || || || || Sbjct: 1311 gaacttagcagctcacgctcattcttgttccacagcagggaacaaacctgagatcctgta 1252 Query: 519 tcgactgagttgaggcatgcgcccgtgtgtgtgttccagaacttgatgcaacggtcattt 578 || | |||||| | ||| ||||| || || || |||||||| || ||||| | |||| || Sbjct: 1251 tcaattgagttcaagcaagcgccagtatgggtattccagaattttatgcacctgtcactt 1192 Query: 579 gcgccaccacctgatgccagcaggttgctctggaacgggcaccatgcaagcgccttcaca 638 | |||||||| || |||| | ||| | |||||| || ||||| ||||| || || ||| Sbjct: 1191 ccaccaccaccagaggccaataagttaccctggaaaggacaccaagcaagggctttaaca 1132 Query: 639 gcagctgagtggtcttcca 657 ||||||| ||| ||||||| Sbjct: 1131 gcagctgtgtgatcttcca 1113
>emb|AJ224078.1|BNAJ4078 Brassica napus mRNA with similarity to p55cdc and fizzy genes Length = 1721 Score = 71.9 bits (36), Expect = 3e-09 Identities = 177/224 (79%) Strand = Plus / Minus Query: 339 gtgcaaccatcagggctctgagccatgaagaggacacgggaagtatggccattgagctcg 398 ||||||||||| || |||||||||||| | || || | || ||||| ||| ||||||| Sbjct: 1399 gtgcaaccatctggactctgagccatgtatagaactcttgacgtatgaccagtgagctca 1340 Query: 399 gccatcttagtcatcgacgggtacttccacaacgtgagctggttctgagtgaatccatgc 458 ||||| || ||| || ||||||||||||||||| ||||||||||| || || || || Sbjct: 1339 gccattttcaccatagatgggtacttccacaacgtaagctggttctgtgtaaacccgtgt 1280 Query: 459 gagctcaacagctctctgtcgttcttgttccagagcagtgcgcacacttgtgacccggtg 518 ||||| | || |||||| || |||||| |||| | ||| | || ||||| || || ||| Sbjct: 1279 gagctaagcaactctctttcattcttgctccataacagcgaacaaacttgggagccagtg 1220 Query: 519 tcgactgagttgaggcatgcgcccgtgtgtgtgttccagaactt 562 || ||||| || | ||| || || ||||| |||||||||||||| Sbjct: 1219 tctactgaattcaagcaagctcctgtgtgagtgttccagaactt 1176
>emb|CT571264.2| Medicago truncatula chromosome 5 clone mth2-146m15, COMPLETE SEQUENCE Length = 141614 Score = 65.9 bits (33), Expect = 2e-07 Identities = 150/189 (79%) Strand = Plus / Minus Query: 378 gaagtatggccattgagctcggccatcttagtcatcgacgggtacttccacaacgtgagc 437 |||||||| ||||||||||| |||||||| ||| || || || ||||| | || ||| Sbjct: 63512 gaagtatgaccattgagctctgccatcttgaccattgaaggatatttccaaagtgttagc 63453 Query: 438 tggttctgagtgaatccatgcgagctcaacagctctctgtcgttcttgttccagagcagt 497 || ||||||| || ||||| ||||| | || ||| || || ||||||||||| || || Sbjct: 63452 tgattctgagcaaaaccatgagagctgagcaactccctttcattcttgttccatagtagg 63393 Query: 498 gcgcacacttgtgacccggtgtcgactgagttgaggcatgcgcccgtgtgtgtgttccag 557 | || || || ||||||||||| || ||||| |||||||| || |||||||| ||||| Sbjct: 63392 gaacatacctgagacccggtgtcaaccgagttcaggcatgcacctgtgtgtgtattccaa 63333 Query: 558 aacttgatg 566 ||||||||| Sbjct: 63332 aacttgatg 63324
>emb|AL590444.1|CNS07EGB chromosome IV of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 218329 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Minus Query: 615 gggcaccatgcaagcgccttcacagcag 642 |||||||||||||||||||| ||||||| Sbjct: 161886 gggcaccatgcaagcgccttaacagcag 161859
>ref|NM_119480.2| Arabidopsis thaliana CDC20.2; signal transducer AT4G33260 (CDC20.2) mRNA, complete cds Length = 1737 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Minus Query: 609 tggaacgggcaccatgcaagcgccttcacagcag 642 ||||| |||||||| ||||| ||||||||||||| Sbjct: 1178 tggaaagggcaccacgcaagagccttcacagcag 1145
>ref|NM_119481.2| Arabidopsis thaliana CDC20.1; signal transducer AT4G33270 (CDC20.1) mRNA, complete cds Length = 1769 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Minus Query: 609 tggaacgggcaccatgcaagcgccttcacagcag 642 ||||| |||||||| ||||| ||||||||||||| Sbjct: 1179 tggaaagggcaccacgcaagagccttcacagcag 1146
>emb|AL161583.2|ATCHRIV79 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 79 Length = 199536 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Plus Query: 609 tggaacgggcaccatgcaagcgccttcacagcag 642 ||||| |||||||| ||||| ||||||||||||| Sbjct: 73136 tggaaagggcaccacgcaagagccttcacagcag 73169 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Plus Query: 609 tggaacgggcaccatgcaagcgccttcacagcag 642 ||||| |||||||| ||||| ||||||||||||| Sbjct: 69813 tggaaagggcaccacgcaagagccttcacagcag 69846
>emb|AL035678.1|ATF17M5 Arabidopsis thaliana DNA chromosome 4, BAC clone F17M5 (ESSA project) Length = 96475 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Plus Query: 609 tggaacgggcaccatgcaagcgccttcacagcag 642 ||||| |||||||| ||||| ||||||||||||| Sbjct: 8357 tggaaagggcaccacgcaagagccttcacagcag 8390 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Plus Query: 609 tggaacgggcaccatgcaagcgccttcacagcag 642 ||||| |||||||| ||||| ||||||||||||| Sbjct: 5034 tggaaagggcaccacgcaagagccttcacagcag 5067
>emb|BX827882.1|CNS0A3XV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZF10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1717 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Minus Query: 609 tggaacgggcaccatgcaagcgccttcacagcag 642 ||||| |||||||| ||||| ||||||||||||| Sbjct: 1167 tggaaagggcaccacgcaagagccttcacagcag 1134
>dbj|AK117888.1| Arabidopsis thaliana At4g33270 mRNA for putative WD-repeat protein, complete cds, clone: RAFL19-06-M11 Length = 893 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Minus Query: 609 tggaacgggcaccatgcaagcgccttcacagcag 642 ||||| |||||||| ||||| ||||||||||||| Sbjct: 344 tggaaagggcaccacgcaagagccttcacagcag 311
>gb|AF029263.1|AF029263 Arabidopsis thaliana putative cdc20 protein (CDC20.2) mRNA, complete cds Length = 1790 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Minus Query: 609 tggaacgggcaccatgcaagcgccttcacagcag 642 ||||| |||||||| ||||| ||||||||||||| Sbjct: 1226 tggaaagggcaccacgcaagagccttcacagcag 1193
>gb|AF029262.1|AF029262 Arabidopsis thaliana putative cdc20 protein (CDC20.1) mRNA, complete cds Length = 1848 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Minus Query: 609 tggaacgggcaccatgcaagcgccttcacagcag 642 ||||| |||||||| ||||| ||||||||||||| Sbjct: 1227 tggaaagggcaccacgcaagagccttcacagcag 1194
>gb|AY675107.1| Ostreococcus tauri CDC20 protein (CDC20) gene, complete cds Length = 1188 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 549 gtgttccagaacttgatgcaacggtc 574 |||||||||||||||||||| ||||| Sbjct: 851 gtgttccagaacttgatgcagcggtc 826
>gb|AC133876.8| Mus musculus chromosome 5, clone RP23-190E15, complete sequence Length = 187088 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 atatataatgcgacatatgta 24 ||||||||||||||||||||| Sbjct: 31512 atatataatgcgacatatgta 31492
>gb|AC124532.4| Mus musculus BAC clone RP23-312P22 from chromosome 15, complete sequence Length = 218337 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 aactgttgaacattctgctctgggg 247 |||||| |||||||||||||||||| Sbjct: 81558 aactgtggaacattctgctctgggg 81582
>gb|AC121916.3| Mus musculus BAC clone RP24-192K21 from chromosome 13, complete sequence Length = 157970 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 cagtacacacaaagaatttct 143 ||||||||||||||||||||| Sbjct: 123737 cagtacacacaaagaatttct 123757
>emb|AL845333.3| Mouse DNA sequence from clone RP23-245E19 on chromosome 4 Contains part of the Ptprd gene for receptor type protein tyrosine phosphatase D, complete sequence Length = 186256 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 atatgtatgtataacatacat 38 ||||||||||||||||||||| Sbjct: 707 atatgtatgtataacatacat 727
>emb|AL845335.13| Mouse DNA sequence from clone RP23-245N3 on chromosome 4, complete sequence Length = 122715 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 atatgtatgtataacatacat 38 ||||||||||||||||||||| Sbjct: 121422 atatgtatgtataacatacat 121442
>dbj|AK044978.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130017G07 product:EGF-like repeats and discordin I-like domains 3, full insert sequence Length = 2829 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 cagtacacacaaagaatttct 143 ||||||||||||||||||||| Sbjct: 1912 cagtacacacaaagaatttct 1932
>gb|AC090290.5| Mus musculus chromosome 15, clone RP23-393P12, complete sequence Length = 201650 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 223 aactgttgaacattctgctctgggg 247 |||||| |||||||||||||||||| Sbjct: 47540 aactgtggaacattctgctctgggg 47516
>gb|AC154668.2| Mus musculus BAC clone RP24-285D22 from 13, complete sequence Length = 147595 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 cagtacacacaaagaatttct 143 ||||||||||||||||||||| Sbjct: 111412 cagtacacacaaagaatttct 111392
>gb|AC160979.2| Mus musculus BAC clone RP23-437B11 from chromosome 15, complete sequence Length = 216014 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 223 aactgttgaacattctgctctgggg 247 |||||| |||||||||||||||||| Sbjct: 3526 aactgtggaacattctgctctgggg 3502
>ref|NM_122639.1| Arabidopsis thaliana signal transducer AT5G27570 mRNA, complete cds Length = 1236 Score = 40.1 bits (20), Expect = 9.0 Identities = 119/152 (78%) Strand = Plus / Minus Query: 312 gtctcgtctgcggccgcagatgccaccgtgcaaccatcagggctctgagccatgaagagg 371 |||||||| |||| ||||| ||||| || |||||||| || ||||| ||||| || || Sbjct: 1133 gtctcgtcaccggctgcagaagccacggtacaaccatccggactctgtgccataaaaaga 1074 Query: 372 acacgggaagtatggccattgagctcggccatcttagtcatcgacgggtacttccacaac 431 || | || ||||| |||||||| || ||||| || ||| || ||||||||||| | Sbjct: 1073 actcttgatgtatgaccattgagttcagccattttcaccatagatgggtacttccaaagt 1014 Query: 432 gtgagctggttctgagtgaatccatgcgagct 463 || ||||||||||| || || ||||| ||||| Sbjct: 1013 gtaagctggttctgtgtaaacccatgtgagct 982
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome Length = 2401520 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 cggtcatttgcgccaccacc 589 |||||||||||||||||||| Sbjct: 2162490 cggtcatttgcgccaccacc 2162509
>gb|AY526242.1| Trypanosoma cruzi putative amino acid transporter PAT1 gene, complete cds Length = 1668 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 catgaagaggacacgggaag 381 |||||||||||||||||||| Sbjct: 124 catgaagaggacacgggaag 143
>gb|AC163015.4| Mus musculus chromosome 3, clone RP23-149I5, complete sequence Length = 200423 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 acatatgtatgtataacata 35 |||||||||||||||||||| Sbjct: 114336 acatatgtatgtataacata 114355
>gb|AC123507.4| Rattus norvegicus 11 BAC CH230-18C5 (Children's Hospital Oakland Research Institute) complete sequence Length = 166073 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 tatgtatgtataacatacat 38 |||||||||||||||||||| Sbjct: 74241 tatgtatgtataacatacat 74260
>emb|AL356133.17| Human DNA sequence from clone RP11-337A23 on chromosome 9 Contains a novel gene (FLJ13657), the PLAA gene for phospholipase A2-activating protein (PLAP), a novel gene, the 5' end of capillary morphogenesis protein 1 (CMG-1, FLJ22621)(CMG1) and 3 CpG islands, complete sequence Length = 187805 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ggagtcccaaacacattcca 301 |||||||||||||||||||| Sbjct: 46226 ggagtcccaaacacattcca 46245
>emb|AL672272.10| Mouse DNA sequence from clone RP23-47N2 on chromosome 4 Contains the Rgs3 gene for regulator of G-protein signaling 3, three novel genes and a CpG island, complete sequence Length = 184345 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 acatatgtatgtataacata 35 |||||||||||||||||||| Sbjct: 88327 acatatgtatgtataacata 88346
>gb|AC026741.6| Homo sapiens chromosome 5 clone CTD-2653M23, complete sequence Length = 195849 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 gtaaaatcagcctgctaatt 165 |||||||||||||||||||| Sbjct: 186286 gtaaaatcagcctgctaatt 186267
>gb|AC093791.3| Homo sapiens BAC clone RP11-261K4 from 4, complete sequence Length = 166189 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 atatgtatgtataacataca 37 |||||||||||||||||||| Sbjct: 84890 atatgtatgtataacataca 84871
>gb|AC158231.2| Mus musculus BAC clone RP24-510K1 from chromosome 7, complete sequence Length = 207943 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 tgcgagctcaacagctctct 475 |||||||||||||||||||| Sbjct: 17309 tgcgagctcaacagctctct 17290
>gb|AC026463.5| Homo sapiens chromosome 5 clone RP11-317I23, complete sequence Length = 169199 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 gtaaaatcagcctgctaatt 165 |||||||||||||||||||| Sbjct: 114961 gtaaaatcagcctgctaatt 114980
>gb|AC119038.4| Homo sapiens 3 BAC RP11-508O18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 175249 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 ataacatacatcaaactggt 47 |||||||||||||||||||| Sbjct: 83856 ataacatacatcaaactggt 83875
>gb|AC007389.7| Homo sapiens BAC clone RP11-418H16 from 2, complete sequence Length = 209197 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 ataacatacatcaaactggt 47 |||||||||||||||||||| Sbjct: 29780 ataacatacatcaaactggt 29799
>gb|AC008080.1|AC008080 Homo sapiens clone RP11-89N17 from 7p14-15, complete sequence Length = 178635 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 tatgtatgtataacatacat 38 |||||||||||||||||||| Sbjct: 153181 tatgtatgtataacatacat 153162
>emb|BX548165.11| Mouse DNA sequence from clone RP24-89M13 on chromosome 11, complete sequence Length = 51451 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 tgcaaccatcagggctctga 359 |||||||||||||||||||| Sbjct: 42608 tgcaaccatcagggctctga 42589
>gb|AC135255.2| Homo sapiens 12 BAC RP11-118B13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 55548 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 acatatgtatgtataacata 35 |||||||||||||||||||| Sbjct: 15775 acatatgtatgtataacata 15794
>gb|AC007478.1|AC007478 Arabidopsis thaliana BAC F15A18 from chromosome V near 68.5 cM, complete sequence Length = 107931 Score = 40.1 bits (20), Expect = 9.0 Identities = 119/152 (78%) Strand = Plus / Plus Query: 312 gtctcgtctgcggccgcagatgccaccgtgcaaccatcagggctctgagccatgaagagg 371 |||||||| |||| ||||| ||||| || |||||||| || ||||| ||||| || || Sbjct: 44286 gtctcgtcaccggctgcagaagccacggtacaaccatccggactctgtgccataaaaaga 44345 Query: 372 acacgggaagtatggccattgagctcggccatcttagtcatcgacgggtacttccacaac 431 || | || ||||| |||||||| || ||||| || ||| || ||||||||||| | Sbjct: 44346 actcttgatgtatgaccattgagttcagccattttcaccatagatgggtacttccaaagt 44405 Query: 432 gtgagctggttctgagtgaatccatgcgagct 463 || ||||||||||| || || ||||| ||||| Sbjct: 44406 gtaagctggttctgtgtaaacccatgtgagct 44437
>gb|AC005771.1|AC005771 Homo sapiens chromosome 17, clone hRPK.1058_G_23, complete sequence Length = 190434 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 ggatcaatgtaaaatataccaact 85 ||||||||||||||||||| |||| Sbjct: 21261 ggatcaatgtaaaatatacaaact 21284
>gb|AC150895.2| Mus musculus BAC clone RP24-274J5 from 7, complete sequence Length = 179893 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 tgcgagctcaacagctctct 475 |||||||||||||||||||| Sbjct: 25936 tgcgagctcaacagctctct 25955
>gb|AC004598.1|AC004598 Homo sapiens chromosome 19, cosmid F21944, complete sequence Length = 41133 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 gcatgcgcccgtgtgtgtgt 552 |||||||||||||||||||| Sbjct: 25833 gcatgcgcccgtgtgtgtgt 25814 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,120,217 Number of Sequences: 3902068 Number of extensions: 6120217 Number of successful extensions: 101961 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 101782 Number of HSP's gapped (non-prelim): 174 length of query: 657 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 634 effective length of database: 17,143,297,704 effective search space: 10868850744336 effective search space used: 10868850744336 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)