| Clone Name | rbags7p20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ADA2A_PIG (P18871) Alpha-2A adrenergic receptor (Alpha-2A adreno... | 30 | 5.4 | 2 | CDT1_HUMAN (Q9H211) DNA replication factor Cdt1 (Double parked h... | 30 | 7.1 | 3 | DRD4_HUMAN (P21917) D(4) dopamine receptor (Dopamine D4 receptor... | 30 | 9.3 |
|---|
>ADA2A_PIG (P18871) Alpha-2A adrenergic receptor (Alpha-2A adrenoceptor)| (Alpha-2A adrenoreceptor) (Alpha-2AAR) Length = 450 Score = 30.4 bits (67), Expect = 5.4 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = -3 Query: 513 RRRPAA-GPLKPKTPAQTRRQSRADSTAWKGSRKRIRFQSFTLCLPLALGTWSCC 352 RR P A GP P T A R A ++ W+G + R + FT L + +G + C Sbjct: 334 RRGPGAPGPGAPATGAGEERGGVAKASRWRGRQNREK--RFTFVLAVVIGVFVVC 386
>CDT1_HUMAN (Q9H211) DNA replication factor Cdt1 (Double parked homolog) (DUP)| Length = 546 Score = 30.0 bits (66), Expect = 7.1 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 5/44 (11%) Frame = -3 Query: 522 YTSRRRPAAGPLKP-----KTPAQTRRQSRADSTAWKGSRKRIR 406 + +RRRP + P +TP+ R RA ++A GSRKR R Sbjct: 9 FFARRRPGPPRIAPPKLACRTPSPARPALRAPASATSGSRKRAR 52
>DRD4_HUMAN (P21917) D(4) dopamine receptor (Dopamine D4 receptor) (D(2C)| dopamine receptor) Length = 467 Score = 29.6 bits (65), Expect = 9.3 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = -3 Query: 498 AGPLKPKTPAQTRRQSRADSTAWKGSRKRIRFQSFTLCLPLALGTWSCC 352 A L P+TP QTRR+ RA T + R+ LP+ +G + C Sbjct: 366 AAALPPQTPPQTRRRRRAKITGRERKAMRV--------LPVVVGAFLLC 406 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,852,542 Number of Sequences: 219361 Number of extensions: 1684788 Number of successful extensions: 3861 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3761 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3861 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7026286028 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)