ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags7p13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MURA_VIBF1 (Q5E7V0) UDP-N-acetylglucosamine 1-carboxyvinyltransf... 30 7.8

>MURA_VIBF1 (Q5E7V0) UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC|
           2.5.1.7) (Enoylpyruvate transferase)
           (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)
          Length = 422

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = -2

Query: 318 ASGLLCFCSAHETN*QTFLESCLQKLPYTRWCXGP--SRWGNGYPCASLAGXCQFGARPV 145
           ASG+  FC+ ++          ++ +  + W  GP  +R+G G    SL G C  GARPV
Sbjct: 75  ASGVNDFCAPYDL---------VKTMRASIWALGPLVARFGKGQ--VSLPGGCAIGARPV 123


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,038,539
Number of Sequences: 219361
Number of extensions: 1466115
Number of successful extensions: 3238
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3238
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5881538857
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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