| Clone Name | rbags7p13 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_368566.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00678.4) partial mRNA Length = 810 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 417 tggaggcacgtttgcttttgagatg 441 ||||||||| ||||||||||||||| Sbjct: 405 tggaggcacctttgcttttgagatg 429
>gb|AC147082.2| Mus musculus BAC clone RP23-321E5 from chromosome 9, complete sequence Length = 202957 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 tcatgagctgaacaaaagcac 304 ||||||||||||||||||||| Sbjct: 130205 tcatgagctgaacaaaagcac 130225
>gb|AC117219.2| Mus musculus BAC clone RP23-344D18 from chromosome 9, complete sequence Length = 216199 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 tcatgagctgaacaaaagcac 304 ||||||||||||||||||||| Sbjct: 213068 tcatgagctgaacaaaagcac 213088
>emb|AL596170.1| Listeria innocua Clip11262 complete genome, segment 8/12 Length = 313450 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 344 agtgtttcttctacttctaca 364 ||||||||||||||||||||| Sbjct: 232081 agtgtttcttctacttctaca 232101
>gb|AC026226.9| Homo sapiens chromosome 10 clone RP11-81B10, complete sequence Length = 158556 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 432 ttttgagatgttctgttgccc 452 ||||||||||||||||||||| Sbjct: 83462 ttttgagatgttctgttgccc 83482
>emb|BX649398.4| Zebrafish DNA sequence from clone DKEY-202B22 in linkage group 4, complete sequence Length = 166156 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 atcaatctgcttggcgtgtct 560 ||||||||||||||||||||| Sbjct: 43906 atcaatctgcttggcgtgtct 43926
>gb|AC124560.4| Mus musculus BAC clone RP23-166O22 from chromosome 5, complete sequence Length = 222593 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tatagatttaacagcagtca 102 |||||||||||||||||||| Sbjct: 82387 tatagatttaacagcagtca 82406
>gb|AC125038.4| Mus musculus BAC clone RP23-333P7 from chromosome 5, complete sequence Length = 198463 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tatagatttaacagcagtca 102 |||||||||||||||||||| Sbjct: 53710 tatagatttaacagcagtca 53691
>gb|AC146865.11| Medicago truncatula clone mth2-36m14, complete sequence Length = 128493 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 atctatctatagatttaaca 95 |||||||||||||||||||| Sbjct: 26654 atctatctatagatttaaca 26673
>emb|AL139108.17| Human DNA sequence from clone RP4-759O7 on chromosome 6 Contains part of the FUT9 gene for fucosyltransferase 9 (alpha (1,3) fucosyltransferase), complete sequence Length = 30544 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 aaaggtttgctaattagtct 284 |||||||||||||||||||| Sbjct: 17934 aaaggtttgctaattagtct 17915
>gb|AC091184.6| Homo sapiens chromosome 8, clone RP11-353O11, complete sequence Length = 142867 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gtctcatgagctgaacaaaa 300 |||||||||||||||||||| Sbjct: 108427 gtctcatgagctgaacaaaa 108446
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 tttgcttttgagatgttctg 446 |||||||||||||||||||| Sbjct: 1175530 tttgcttttgagatgttctg 1175549
>gb|AC104229.18| Homo sapiens chromosome 15, clone RP11-23A22, complete sequence Length = 168235 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 gatatccatttccccatctc 211 |||||||||||||||||||| Sbjct: 68639 gatatccatttccccatctc 68620
>emb|AL773567.16| Mouse DNA sequence from clone RP23-204P1 on chromosome 4, complete sequence Length = 189970 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 cagtgtttcttctacttcta 362 |||||||||||||||||||| Sbjct: 53524 cagtgtttcttctacttcta 53543
>gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1729_E02, complete sequence Length = 90509 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 tttgcttttgagatgttctg 446 |||||||||||||||||||| Sbjct: 25816 tttgcttttgagatgttctg 25835 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,963,352 Number of Sequences: 3902068 Number of extensions: 4963352 Number of successful extensions: 103695 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103637 Number of HSP's gapped (non-prelim): 58 length of query: 634 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 611 effective length of database: 17,143,297,704 effective search space: 10474554897144 effective search space used: 10474554897144 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)