>VE6_HPV66 (Q80955) Protein E6|
          Length = 155

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +2

Query: 254 LHLKVDCTLCRKPITR-GLHRYNQFSISLIYRNNTP 358
           L L++ C  C+K +T   L+R+    + L+YRNN P
Sbjct: 27  LDLRLSCVYCKKELTSLELYRFACIELKLVYRNNWP 62

>REPY_ECOLI (P22308) Replication initiation protein|
          Length = 316

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 20/85 (23%), Positives = 40/85 (47%)
 Frame = +2

Query: 152 WLFKDILQKKRRPTNCNLHLAENKITHVSTSS*CLHLKVDCTLCRKPITRGLHRYNQFSI 331
           WL K++ QKK    N  + L E K   +  ++     +++  +  KPI++ L+ Y+   +
Sbjct: 148 WLLKELTQKKTHKANIEISLDEFKFMLMLENNYHEFKRLNQWVL-KPISKDLNTYSNMKL 206

Query: 332 SLIYRNNTPNKLNHTIRLGRQFSIL 406
            +  R    + L   + L RQ  ++
Sbjct: 207 VVDKRGRPTDTLIFQVELDRQMDLV 231


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,306,978
Number of Sequences: 219361
Number of extensions: 1678946
Number of successful extensions: 4031
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4023
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)