ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags7o23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK104932.1| Oryza sativa (japonica cultivar-group) cDNA clon... 341 2e-90
2ref|NM_192312.1| Oryza sativa (japonica cultivar-group), predic... 339 7e-90
3dbj|AK069337.1| Oryza sativa (japonica cultivar-group) cDNA clon... 333 4e-88
4gb|AY568720.1| Lycopersicon esculentum putative anion:sodium sym... 149 1e-32
5ref|NM_179758.2| Arabidopsis thaliana bile acid:sodium symporter... 137 5e-29
6gb|AF498303.1| Arabidopsis thaliana putative sodium-dependent bi... 137 5e-29
7emb|BX821670.1|CNS0A947 Arabidopsis thaliana Full-length cDNA Co... 137 5e-29
8gb|BT003925.1| Arabidopsis thaliana clone RAFL15-23-I10 (R20694)... 137 5e-29
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
10dbj|AP002910.1| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
11gb|AC005168.3| Arabidopsis thaliana chromosome 2 clone F12C20 ma... 92 3e-15
12emb|BX821429.1|CNS0A9AK Arabidopsis thaliana Full-length cDNA Co... 80 1e-11
13gb|AC161384.4| Gallus gallus BAC clone CH261-69B2 from chromosom... 46 0.14
14gb|AC167334.3| Gallus gallus BAC clone CH261-18C17 from chromoso... 46 0.14
15gb|AC140916.17| Medicago truncatula clone mth2-12b2, complete se... 44 0.56
16emb|BX571774.9| Zebrafish DNA sequence from clone DKEY-250A19 in... 44 0.56
17gb|AC112507.7| Homo sapiens 3 BAC RP11-321C3 (Roswell Park Cance... 44 0.56
18gb|AC096735.3| Homo sapiens BAC clone RP11-135M12 from 4, comple... 44 0.56
19gb|AC159424.1| Trypanosoma brucei chromosome 6 clone RPCI93-26F1... 42 2.2
20gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence 42 2.2
21gb|AC079606.6| Trypanosoma brucei chromosome 2 clone RPCI93-3B10... 42 2.2
22gb|AC073246.5| Trypanosoma brucei chromosome 2 clone RPCI93-25N2... 42 2.2
23gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence 42 2.2
24ref|XM_841290.1| Trypanosoma brucei TREU927 retrotransposon hot ... 42 2.2
25ref|XM_946386.1| Trypanosoma brucei TREU927 retrotransposon hot ... 42 2.2
26ref|XM_946390.1| Trypanosoma brucei TREU927 retrotransposon hot ... 42 2.2
27ref|XM_946391.1| Trypanosoma brucei TREU927 retrotransposon hot ... 42 2.2
28ref|XM_946393.1| Trypanosoma brucei TREU927 retrotransposon hot ... 42 2.2
29ref|XM_946404.1| Trypanosoma brucei TREU927 retrotransposon hot ... 42 2.2
30emb|BX248585.1| Blochmannia floridanus complete genome; segment 2/3 42 2.2
31emb|AL671259.1|TBH25N7 Trypanosoma brucei 221 VSG expression sit... 42 2.2
32emb|AL671256.1|TBN19B2 Trypanosoma brucei VO2 VSG expression sit... 42 2.2
33gb|AY046890.1| Trypanosoma brucei RHS4a (RHS4a) gene, complete cds 42 2.2
34gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 42 2.2
35emb|CR974587.14| Pig DNA sequence from clone CH242-288P9 on chro... 42 2.2
36gb|AC155099.1| Medicago truncatula chromosome 7 BAC clone mth2-1... 40 8.8
37gb|AC169819.2| Rhesus Macaque BAC CH250-132C22 (Children's Hosp... 40 8.8
38gb|AC112979.9| Mus musculus chromosome 3, clone RP24-530C22, com... 40 8.8
39gb|AC130483.6| Mus musculus chromosome 15, clone RP24-137D10, co... 40 8.8
40gb|AC101984.13| Mus musculus chromosome 10, clone RP24-352K10, c... 40 8.8
41gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.8
42ref|XM_382306.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 8.8
43emb|AL031663.2|HS461P17 Human DNA sequence from clone RP3-461P17... 40 8.8
44emb|AL590965.17| Human DNA sequence from clone RP11-185B12 on ch... 40 8.8
45emb|AL356095.11| Human DNA sequence from clone RP11-369J21 on ch... 40 8.8
46gb|AE017160.1| Chlamydophila pneumoniae TW-183, section 4 of 4 o... 40 8.8
47gb|AC159975.4| Mus musculus chromosome 3, clone RP24-204F16, com... 40 8.8
48emb|AL021452.20|HS285F3 Human DNA sequence from clone CTA-285F3 ... 40 8.8
49ref|XM_961740.1| PREDICTED: Tribolium castaneum similar to CG125... 40 8.8
50emb|AL096856.1|ATT24C20 Arabidopsis thaliana DNA chromosome 3, B... 40 8.8
51gb|AC026130.15| Homo sapiens chromosome 17, clone RP11-801J18, c... 40 8.8
52gb|AC025518.8| Homo sapiens chromosome 17, clone RP11-713H12, co... 40 8.8
53gb|AC145335.15| Pan troglodytes clone rp43-26k12, complete sequence 40 8.8
54emb|BX537314.17| Zebrafish DNA sequence from clone CH211-120E1 i... 40 8.8
55gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome 40 8.8
56gb|AC159214.2| Pan troglodytes BAC clone CH251-522M3 from chromo... 40 8.8
57gb|AF116276.1|AF116276 Trichomonas vaginalis surface immunogen P... 40 8.8
58gb|AE002098.2| Neisseria meningitidis MC58, complete genome 40 8.8
59gb|AC091501.1|AC091501 Drosophila melanogaster, chromosome 2R, r... 40 8.8
60dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
61gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033... 40 8.8
62gb|AC157018.6| Mus musculus 10 BAC RP24-414A19 (Roswell Park Can... 40 8.8
63gb|AC138336.3| Homo sapiens chromosome 17, clone CTC-386K3, comp... 40 8.8
64gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome 40 8.8
65dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, compl... 40 8.8
66emb|AL391262.3|CNS06C86 Human chromosome 14 DNA sequence BAC R-8... 40 8.8
67emb|BX323007.11| Zebrafish DNA sequence from clone CH211-262K23 ... 40 8.8
68gb|AE003806.3| Drosophila melanogaster chromosome 2R, section 44... 40 8.8
69gb|AF004355.1|AF004355 Trichomonas vaginalis surface immunogen P... 40 8.8
70gb|AC004289.1|AC004289 Drosophila melanogaster DNA sequence (P1 ... 40 8.8
71emb|AL357615.7|HS373D10 Homo sapiens chromosome 9 BAC RP11-373D1... 40 8.8
72dbj|AP001166.4| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 8.8
73dbj|AP006639.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 8.8
74emb|AL391667.19| Human DNA sequence from clone RP11-214L15 on ch... 40 8.8 
>dbj|AK104932.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-B10, full
            insert sequence
          Length = 1616

 Score =  341 bits (172), Expect = 2e-90
 Identities = 313/360 (86%)
 Strand = Plus / Minus

                                                                        
Query: 275  ttcattccttgaaatcgtccttgtcatctgctggaaggcctctgtttctccagaaaactg 334
            ||||||||||||||||||| ||||||| ||||||||| |||||||| ||||| |||||||
Sbjct: 1315 ttcattccttgaaatcgtctttgtcatttgctggaagccctctgttcctccaaaaaactg 1256

                                                                        
Query: 335  cgagagcactgcctccgagcgccatgcacacaacactgacagcagaaggaacagcaacaa 394
            | |||||||| ||||| ||||||||||| ||||||||||||||||| |||||||| || |
Sbjct: 1255 caagagcactccctccaagcgccatgcatacaacactgacagcagatggaacagctacga 1196

                                                                        
Query: 395  gagggtttgtgaagtgcttttgggcaagtaaaaatccaagtgcagaactctgcattccac 454
            | || || ||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 1195 gtggattcgtgaagtgcttttgggcaagtaaaaatccaagtgcagaactctgcatcccgc 1136

                                                                        
Query: 455  actcaattgagatggttctagaagttgattccccaaaagaagaccatttcgacatccaat 514
            | ||||| ||||| || ||||||||||||||||||||||| ||   ||| || | |||||
Sbjct: 1135 attcaatagagatagtcctagaagttgattccccaaaagaggaaacttttgataaccaat 1076

                                                                        
Query: 515  agccaagagtgaatgcaacagcatgcagcagagcaacagggagaataagttgagcacctt 574
            | ||||| |  || ||| || |||||||||||||||| || |  ||||||||| ||||||
Sbjct: 1075 acccaagtgcaaaggcagcaacatgcagcagagcaacgggaattataagttgaccacctt 1016

                                                                        
Query: 575  gagttttcaacacttctgcgacttgcccaatagggctagcacaaagcaaggtggtgagga 634
            ||| ||||||||| |||| |||||| || ||||| |||||||||||||| ||||||||||
Sbjct: 1015 gagctttcaacacctctgagacttgtccgataggactagcacaaagcaaagtggtgagga 956
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>ref|NM_192312.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1227

 Score =  339 bits (171), Expect = 7e-90
 Identities = 312/359 (86%)
 Strand = Plus / Minus

                                                                        
Query: 276  tcattccttgaaatcgtccttgtcatctgctggaaggcctctgtttctccagaaaactgc 335
            |||||||||||||||||| ||||||| ||||||||| |||||||| ||||| ||||||||
Sbjct: 1227 tcattccttgaaatcgtctttgtcatttgctggaagccctctgttcctccaaaaaactgc 1168

                                                                        
Query: 336  gagagcactgcctccgagcgccatgcacacaacactgacagcagaaggaacagcaacaag 395
             |||||||| ||||| ||||||||||| ||||||||||||||||| |||||||| || ||
Sbjct: 1167 aagagcactccctccaagcgccatgcatacaacactgacagcagatggaacagctacgag 1108

                                                                        
Query: 396  agggtttgtgaagtgcttttgggcaagtaaaaatccaagtgcagaactctgcattccaca 455
             || || ||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 1107 tggattcgtgaagtgcttttgggcaagtaaaaatccaagtgcagaactctgcatcccgca 1048

                                                                        
Query: 456  ctcaattgagatggttctagaagttgattccccaaaagaagaccatttcgacatccaata 515
             ||||| ||||| || ||||||||||||||||||||||| ||   ||| || | ||||||
Sbjct: 1047 ttcaatagagatagtcctagaagttgattccccaaaagaggaaacttttgataaccaata 988

                                                                        
Query: 516  gccaagagtgaatgcaacagcatgcagcagagcaacagggagaataagttgagcaccttg 575
             ||||| |  || ||| || |||||||||||||||| || |  ||||||||| |||||||
Sbjct: 987  cccaagtgcaaaggcagcaacatgcagcagagcaacgggaattataagttgaccaccttg 928

                                                                       
Query: 576  agttttcaacacttctgcgacttgcccaatagggctagcacaaagcaaggtggtgagga 634
            || ||||||||| |||| |||||| || ||||| |||||||||||||| ||||||||||
Sbjct: 927  agctttcaacacctctgagacttgtccgataggactagcacaaagcaaagtggtgagga 869
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>dbj|AK069337.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014F07, full
            insert sequence
          Length = 1887

 Score =  333 bits (168), Expect = 4e-88
 Identities = 312/360 (86%)
 Strand = Plus / Minus

                                                                        
Query: 275  ttcattccttgaaatcgtccttgtcatctgctggaaggcctctgtttctccagaaaactg 334
            ||||||||||||||||||| ||||||| ||||||||| |||||||| ||||| |||||||
Sbjct: 1559 ttcattccttgaaatcgtctttgtcatttgctggaagccctctgttcctccaaaaaactg 1500

                                                                        
Query: 335  cgagagcactgcctccgagcgccatgcacacaacactgacagcagaaggaacagcaacaa 394
            | |||||||| ||||| ||||||||||| ||||||||||||||||| |||||||| || |
Sbjct: 1499 caagagcactccctccaagcgccatgcatacaacactgacagcagatggaacagctacga 1440

                                                                        
Query: 395  gagggtttgtgaagtgcttttgggcaagtaaaaatccaagtgcagaactctgcattccac 454
            | || || ||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 1439 gtggattcgtgaagtgcttttgggcaagtaaaaatccaagtgcagaactctgcatcccgc 1380

                                                                        
Query: 455  actcaattgagatggttctagaagttgattccccaaaagaagaccatttcgacatccaat 514
            | ||||| ||||| || ||||||||||||||||||||||| ||   ||| || | |||||
Sbjct: 1379 attcaatagagatagtcctagaagttgattccccaaaagaggaaacttttgataaccaat 1320

                                                                        
Query: 515  agccaagagtgaatgcaacagcatgcagcagagcaacagggagaataagttgagcacctt 574
            | ||||| |  || ||| || |||||||||||||||| || |  ||||||||| ||||||
Sbjct: 1319 acccaagtgcaaaggcagcaacatgcagcagagcaacgggaattataagttgaccacctt 1260

                                                                        
Query: 575  gagttttcaacacttctgcgacttgcccaatagggctagcacaaagcaaggtggtgagga 634
            ||| |||||| || |||| |||||| || ||||| |||||||||||||| ||||||||||
Sbjct: 1259 gagctttcaatacctctgagacttgtccgataggactagcacaaagcaaagtggtgagga 1200
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>gb|AY568720.1| Lycopersicon esculentum putative anion:sodium symporter mRNA,
            complete cds
          Length = 1224

 Score =  149 bits (75), Expect = 1e-32
 Identities = 135/155 (87%)
 Strand = Plus / Minus

                                                                        
Query: 337  agagcactgcctccgagcgccatgcacacaacactgacagcagaaggaacagcaacaaga 396
            |||||||| || || || |||||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 1163 agagcacttccaccaagtgccatgcagacaacactaacagcagaaggtacagcaacaaga 1104

                                                                        
Query: 397  gggtttgtgaagtgcttttgggcaagtaaaaatccaagtgcagaactctgcattccacac 456
            ||||||||||| |||||||| ||||||| |||||| ||||| ||||||||||||||||| 
Sbjct: 1103 gggtttgtgaaatgcttttgtgcaagtagaaatccgagtgccgaactctgcattccacat 1044

                                               
Query: 457  tcaattgagatggttctagaagttgattccccaaa 491
            || || || || ||||| || |||||||| |||||
Sbjct: 1043 tctatcgaaatagttctggatgttgattcaccaaa 1009



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 574 tgagttttcaacacttctgcgacttgcccaatagggctagcacaaag 620
           |||||||||| ||| ||||||||||| ||||| || |||||||||||
Sbjct: 929 tgagttttcagcacatctgcgacttgaccaatcggactagcacaaag 883
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>ref|NM_179758.2| Arabidopsis thaliana bile acid:sodium symporter/ transporter
            AT2G26900 mRNA, complete cds
          Length = 1504

 Score =  137 bits (69), Expect = 5e-29
 Identities = 221/271 (81%), Gaps = 3/271 (1%)
 Strand = Plus / Minus

                                                                        
Query: 352  agcgccatgcacacaacactgacagcagaaggaacagcaacaagagggtttgtgaagtgc 411
            |||||||| || ||||||||||| ||||||||||||||||| |||||||||||||| |||
Sbjct: 1228 agcgccatacagacaacactgactgcagaaggaacagcaactagagggtttgtgaaatgc 1169

                                                                        
Query: 412  ttttgggcaagtaaaaatccaagtgcagaactctgcattccacactcaattgagatggtt 471
            ||||| ||||| || || || || || ||||| ||||||||||| || || || ||||| 
Sbjct: 1168 ttttgtgcaagcaagaacccgagcgctgaactttgcattccacattctatagaaatggta 1109

                                                                        
Query: 472  ctagaagttgattccccaaaagaagaccatttcgacatccaatagccaagagtgaatgca 531
            |  ||||| || || || |||||| ||   || || ||||||||||||| ||  || || 
Sbjct: 1108 cgcgaagtggactcgccgaaagaaaac---tttgaaatccaatagccaatagcaaaggct 1052

                                                                        
Query: 532  acagcatgcagcagagcaacagggagaataagttgagcaccttgagttttcaacacttct 591
             ||||||| || || || || ||||| ||||||||||| ||||| |||||||| || |||
Sbjct: 1051 gcagcatgaaggagtgccaccgggagtataagttgagctccttgggttttcaaaacatct 992

                                           
Query: 592  gcgacttgcccaatagggctagcacaaagca 622
            || ||||| ||||||||||| ||||| ||||
Sbjct: 991  gcaacttgtccaatagggctggcacagagca 961
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>gb|AF498303.1| Arabidopsis thaliana putative sodium-dependent bile acid symporter
            (Sbf1) mRNA, complete cds
          Length = 1340

 Score =  137 bits (69), Expect = 5e-29
 Identities = 221/271 (81%), Gaps = 3/271 (1%)
 Strand = Plus / Minus

                                                                        
Query: 352  agcgccatgcacacaacactgacagcagaaggaacagcaacaagagggtttgtgaagtgc 411
            |||||||| || ||||||||||| ||||||||||||||||| |||||||||||||| |||
Sbjct: 1229 agcgccatacagacaacactgactgcagaaggaacagcaactagagggtttgtgaaatgc 1170

                                                                        
Query: 412  ttttgggcaagtaaaaatccaagtgcagaactctgcattccacactcaattgagatggtt 471
            ||||| ||||| || || || || || ||||| ||||||||||| || || || ||||| 
Sbjct: 1169 ttttgtgcaagcaagaacccgagcgctgaactttgcattccacattctatagaaatggta 1110

                                                                        
Query: 472  ctagaagttgattccccaaaagaagaccatttcgacatccaatagccaagagtgaatgca 531
            |  ||||| || || || |||||| ||   || || ||||||||||||| ||  || || 
Sbjct: 1109 cgcgaagtggactcgccgaaagaaaac---tttgaaatccaatagccaatagcaaaggct 1053

                                                                        
Query: 532  acagcatgcagcagagcaacagggagaataagttgagcaccttgagttttcaacacttct 591
             ||||||| || || || || ||||| ||||||||||| ||||| |||||||| || |||
Sbjct: 1052 gcagcatgaaggagtgccaccgggagtataagttgagctccttgggttttcaaaacatct 993

                                           
Query: 592  gcgacttgcccaatagggctagcacaaagca 622
            || ||||| ||||||||||| ||||| ||||
Sbjct: 992  gcaacttgtccaatagggctggcacagagca 962
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>emb|BX821670.1|CNS0A947 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL63ZE07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 601

 Score =  137 bits (69), Expect = 5e-29
 Identities = 221/271 (81%), Gaps = 3/271 (1%)
 Strand = Plus / Minus

                                                                       
Query: 352 agcgccatgcacacaacactgacagcagaaggaacagcaacaagagggtttgtgaagtgc 411
           |||||||| || ||||||||||| ||||||||||||||||| |||||||||||||| |||
Sbjct: 325 agcgccatacagacaacactgactgcagaaggaacagcaactagagggtttgtgaaatgc 266

                                                                       
Query: 412 ttttgggcaagtaaaaatccaagtgcagaactctgcattccacactcaattgagatggtt 471
           ||||| ||||| || || || || || ||||| ||||||||||| || || || ||||| 
Sbjct: 265 ttttgtgcaagcaagaacccgagcgctgaactttgcattccacattctatagaaatggta 206

                                                                       
Query: 472 ctagaagttgattccccaaaagaagaccatttcgacatccaatagccaagagtgaatgca 531
           |  ||||| || || || |||||| ||   || || ||||||||||||| ||  || || 
Sbjct: 205 cgcgaagtggactcgccgaaagaaaac---tttgaaatccaatagccaatagcaaaggct 149

                                                                       
Query: 532 acagcatgcagcagagcaacagggagaataagttgagcaccttgagttttcaacacttct 591
            ||||||| || || || || ||||| ||||||||||| ||||| |||||||| || |||
Sbjct: 148 gcagcatgaaggagtgccaccgggagtataagttgagctccttgggttttcaaaacatct 89

                                          
Query: 592 gcgacttgcccaatagggctagcacaaagca 622
           || ||||| ||||||||||| ||||| ||||
Sbjct: 88  gcaacttgtccaatagggctggcacagagca 58
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>gb|BT003925.1| Arabidopsis thaliana clone RAFL15-23-I10 (R20694) putative Na+
            dependent ileal bile acid transporter (At2g26900) mRNA,
            complete cds
          Length = 1409

 Score =  137 bits (69), Expect = 5e-29
 Identities = 221/271 (81%), Gaps = 3/271 (1%)
 Strand = Plus / Minus

                                                                        
Query: 352  agcgccatgcacacaacactgacagcagaaggaacagcaacaagagggtttgtgaagtgc 411
            |||||||| || ||||||||||| ||||||||||||||||| |||||||||||||| |||
Sbjct: 1118 agcgccatacagacaacactgactgcagaaggaacagcaactagagggtttgtgaaatgc 1059

                                                                        
Query: 412  ttttgggcaagtaaaaatccaagtgcagaactctgcattccacactcaattgagatggtt 471
            ||||| ||||| || || || || || ||||| ||||||||||| || || || ||||| 
Sbjct: 1058 ttttgtgcaagcaagaacccgagcgctgaactttgcattccacattctatagaaatggta 999

                                                                        
Query: 472  ctagaagttgattccccaaaagaagaccatttcgacatccaatagccaagagtgaatgca 531
            |  ||||| || || || |||||| ||   || || ||||||||||||| ||  || || 
Sbjct: 998  cgcgaagtggactcgccgaaagaaaac---tttgaaatccaatagccaatagcaaaggct 942

                                                                        
Query: 532  acagcatgcagcagagcaacagggagaataagttgagcaccttgagttttcaacacttct 591
             ||||||| || || || || ||||| ||||||||||| ||||| |||||||| || |||
Sbjct: 941  gcagcatgaaggagtgccaccgggagtataagttgagctccttgggttttcaaaacatct 882

                                           
Query: 592  gcgacttgcccaatagggctagcacaaagca 622
            || ||||| ||||||||||| ||||| ||||
Sbjct: 881  gcaacttgtccaatagggctggcacagagca 851
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  129 bits (65), Expect = 1e-26
 Identities = 86/93 (92%)
 Strand = Plus / Minus

                                                                            
Query: 354      cgccatgcacacaacactgacagcagaaggaacagcaacaagagggtttgtgaagtgctt 413
                ||||||||| ||||||||||||||||| |||||||| || || || || |||||||||||
Sbjct: 25973573 cgccatgcatacaacactgacagcagatggaacagctacgagtggattcgtgaagtgctt 25973514

                                                 
Query: 414      ttgggcaagtaaaaatccaagtgcagaactctg 446
                |||||||||||||||||||||||||||||||||
Sbjct: 25973513 ttgggcaagtaaaaatccaagtgcagaactctg 25973481



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                            
Query: 275      ttcattccttgaaatcgtccttgtcatctgctggaaggcctctgtttctccagaaaactg 334
                ||||||||||||||||||| ||||||| ||||||||| |||||||| ||||| |||||||
Sbjct: 25973778 ttcattccttgaaatcgtctttgtcatttgctggaagccctctgttcctccaaaaaactg 25973719

                                
Query: 335      cgagagcactgcctcc 350
                | |||||||| |||||
Sbjct: 25973718 caagagcactccctcc 25973703



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 128/156 (82%)
 Strand = Plus / Minus

                                                                            
Query: 444      ctgcattccacactcaattgagatggttctagaagttgattccccaaaagaagaccattt 503
                |||||| || || ||||| ||||| || ||||||||||||||||||||||| ||   |||
Sbjct: 25973006 ctgcatcccgcattcaatagagatagtcctagaagttgattccccaaaagaggaaacttt 25972947

                                                                            
Query: 504      cgacatccaatagccaagagtgaatgcaacagcatgcagcagagcaacagggagaataag 563
                 || | |||||| ||||| |  || ||| || |||||||||||||||| || |  |||||
Sbjct: 25972946 tgataaccaatacccaagtgcaaaggcagcaacatgcagcagagcaacgggaattataag 25972887

                                                    
Query: 564      ttgagcaccttgagttttcaacacttctgcgacttg 599
                |||| ||||||||| ||||||||| |||| ||||||
Sbjct: 25972886 ttgaccaccttgagctttcaacacctctgagacttg 25972851



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 610      ctagcacaaagcaaggtggtgagga 634
                |||||||||||||| ||||||||||
Sbjct: 25972608 ctagcacaaagcaaagtggtgagga 25972584
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>dbj|AP002910.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0707D10
          Length = 172003

 Score =  129 bits (65), Expect = 1e-26
 Identities = 86/93 (92%)
 Strand = Plus / Minus

                                                                         
Query: 354   cgccatgcacacaacactgacagcagaaggaacagcaacaagagggtttgtgaagtgctt 413
             ||||||||| ||||||||||||||||| |||||||| || || || || |||||||||||
Sbjct: 69640 cgccatgcatacaacactgacagcagatggaacagctacgagtggattcgtgaagtgctt 69581

                                              
Query: 414   ttgggcaagtaaaaatccaagtgcagaactctg 446
             |||||||||||||||||||||||||||||||||
Sbjct: 69580 ttgggcaagtaaaaatccaagtgcagaactctg 69548



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                         
Query: 275   ttcattccttgaaatcgtccttgtcatctgctggaaggcctctgtttctccagaaaactg 334
             ||||||||||||||||||| ||||||| ||||||||| |||||||| ||||| |||||||
Sbjct: 69845 ttcattccttgaaatcgtctttgtcatttgctggaagccctctgttcctccaaaaaactg 69786

                             
Query: 335   cgagagcactgcctcc 350
             | |||||||| |||||
Sbjct: 69785 caagagcactccctcc 69770



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 128/156 (82%)
 Strand = Plus / Minus

                                                                         
Query: 444   ctgcattccacactcaattgagatggttctagaagttgattccccaaaagaagaccattt 503
             |||||| || || ||||| ||||| || ||||||||||||||||||||||| ||   |||
Sbjct: 69073 ctgcatcccgcattcaatagagatagtcctagaagttgattccccaaaagaggaaacttt 69014

                                                                         
Query: 504   cgacatccaatagccaagagtgaatgcaacagcatgcagcagagcaacagggagaataag 563
              || | |||||| ||||| |  || ||| || |||||||||||||||| || |  |||||
Sbjct: 69013 tgataaccaatacccaagtgcaaaggcagcaacatgcagcagagcaacgggaattataag 68954

                                                 
Query: 564   ttgagcaccttgagttttcaacacttctgcgacttg 599
             |||| ||||||||| ||||||||| |||| ||||||
Sbjct: 68953 ttgaccaccttgagctttcaacacctctgagacttg 68918



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 610   ctagcacaaagcaaggtggtgagga 634
             |||||||||||||| ||||||||||
Sbjct: 68675 ctagcacaaagcaaagtggtgagga 68651
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>gb|AC005168.3| Arabidopsis thaliana chromosome 2 clone F12C20 map B68, complete
             sequence
          Length = 87978

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 82/94 (87%)
 Strand = Plus / Minus

                                                                         
Query: 354   cgccatgcacacaacactgacagcagaaggaacagcaacaagagggtttgtgaagtgctt 413
             |||||| || ||||||||||| ||||||||||||||||| |||||||||||||| |||||
Sbjct: 29215 cgccatacagacaacactgactgcagaaggaacagcaactagagggtttgtgaaatgctt 29156

                                               
Query: 414   ttgggcaagtaaaaatccaagtgcagaactctgc 447
             ||| ||||| || || || || || |||||||||
Sbjct: 29155 ttgtgcaagcaagaacccgagcgctgaactctgc 29122



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                         
Query: 508   atccaatagccaagagtgaatgcaacagcatgcagcagagcaacagggagaataagttga 567
             ||||||||||||| ||  || ||  ||||||| || || || || ||||| |||||||||
Sbjct: 28973 atccaatagccaatagcaaaggctgcagcatgaaggagtgccaccgggagtataagttga 28914

                                                   
Query: 568   gcaccttgagttttcaacacttctgcgacttgcccaat 605
             || ||||| |||||||| || ||||| ||||| |||||
Sbjct: 28913 gctccttgggttttcaaaacatctgcaacttgtccaat 28876
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>emb|BX821429.1|CNS0A9AK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL41ZA08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 540

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 217/275 (78%), Gaps = 7/275 (2%)
 Strand = Plus / Minus

                                                                       
Query: 352 agcgccatgcacacaacactgacagcagaaggaacagcaaca----agagggtttgtgaa 407
           |||||||| || |||||||| || |||||||||||||||||     || | |||||| ||
Sbjct: 299 agcgccatacagacaacactaactgcagaaggaacagcaacttagtagtgtgtttgttaa 240

                                                                       
Query: 408 gtgcttttgggcaagtaaaaatccaagtgcagaactctgcattccacactcaattgagat 467
            |||||||| ||||| || || || || || ||||| ||||||||||| || || || ||
Sbjct: 239 atgcttttgtgcaagcaagaacccgagcgctgaactttgcattccacattctatagaaat 180

                                                                       
Query: 468 ggttctagaagttgattccccaaaagaagaccatttcgacatccaatagccaagagtgaa 527
           ||| |  ||||| || || || |||||| ||   || || ||||||||||||| ||  ||
Sbjct: 179 ggtacgcgaagtggactcgccgaaagaaaac---tttgaaatccaatagccaatagcaaa 123

                                                                       
Query: 528 tgcaacagcatgcagcagagcaacagggagaataagttgagcaccttgagttttcaacac 587
            ||  ||||||| || || || || ||||| ||||||||||| ||||| |||||||| ||
Sbjct: 122 ggctgcagcatgaaggagtgccaccgggagtataagttgagctccttgggttttcaaaac 63

                                              
Query: 588 ttctgcgacttgcccaatagggctagcacaaagca 622
            ||||| ||||| ||||||||||| ||||| ||||
Sbjct: 62  atctgcaacttgtccaatagggctggcacagagca 28
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>gb|AC161384.4| Gallus gallus BAC clone CH261-69B2 from chromosome ul, complete
             sequence
          Length = 186366

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 30    tactgctttgtccagaagcagcagctt 56
             ||||||||||| |||||||||||||||
Sbjct: 27365 tactgctttgttcagaagcagcagctt 27391
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>gb|AC167334.3| Gallus gallus BAC clone CH261-18C17 from chromosome unknown, complete
             sequence
          Length = 220538

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 30    tactgctttgtccagaagcagcagctt 56
             ||||||||||| |||||||||||||||
Sbjct: 47927 tactgctttgttcagaagcagcagctt 47901
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>gb|AC140916.17| Medicago truncatula clone mth2-12b2, complete sequence
          Length = 133358

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 259   catcatttttgcttcattcatt 280
             ||||||||||||||||||||||
Sbjct: 59800 catcatttttgcttcattcatt 59821
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>emb|BX571774.9| Zebrafish DNA sequence from clone DKEY-250A19 in linkage group 9,
             complete sequence
          Length = 140812

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 526   aatgcaacagcatgcagcagag 547
             ||||||||||||||||||||||
Sbjct: 43131 aatgcaacagcatgcagcagag 43152
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>gb|AC112507.7| Homo sapiens 3 BAC RP11-321C3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 184696

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 362    acacaacactgacagcagaaggaaca 387
              ||||| ||||||||||||||||||||
Sbjct: 161145 acacatcactgacagcagaaggaaca 161170
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>gb|AC096735.3| Homo sapiens BAC clone RP11-135M12 from 4, complete sequence
          Length = 193510

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 264    tttttgcttcattcattccttg 285
              ||||||||||||||||||||||
Sbjct: 113800 tttttgcttcattcattccttg 113779
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>gb|AC159424.1| Trypanosoma brucei chromosome 6 clone RPCI93-26F19, complete sequence
          Length = 101897

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 260   atcatttttgcttcattcatt 280
             |||||||||||||||||||||
Sbjct: 16395 atcatttttgcttcattcatt 16415
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>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence
          Length = 1618915

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 260   atcatttttgcttcattcatt 280
             |||||||||||||||||||||
Sbjct: 16395 atcatttttgcttcattcatt 16415
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>gb|AC079606.6| Trypanosoma brucei chromosome 2 clone RPCI93-3B10, complete sequence
          Length = 160845

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 260    atcatttttgcttcattcatt 280
              |||||||||||||||||||||
Sbjct: 110253 atcatttttgcttcattcatt 110233



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 260   atcatttttgcttcattcatt 280
             |||||||||||||||||||||
Sbjct: 88465 atcatttttgcttcattcatt 88445



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 260   atcatttttgcttcattcatt 280
             |||||||||||||||||||||
Sbjct: 78729 atcatttttgcttcattcatt 78709



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 260   atcatttttgcttcattcatt 280
             |||||||||||||||||||||
Sbjct: 47748 atcatttttgcttcattcatt 47728
to top
>gb|AC073246.5| Trypanosoma brucei chromosome 2 clone RPCI93-25N24, complete sequence
          Length = 113329

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 260   atcatttttgcttcattcatt 280
             |||||||||||||||||||||
Sbjct: 69672 atcatttttgcttcattcatt 69692



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 260   atcatttttgcttcattcatt 280
             |||||||||||||||||||||
Sbjct: 34036 atcatttttgcttcattcatt 34056
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>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence
          Length = 1193948

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 260    atcatttttgcttcattcatt 280
              |||||||||||||||||||||
Sbjct: 221480 atcatttttgcttcattcatt 221460



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 260    atcatttttgcttcattcatt 280
              |||||||||||||||||||||
Sbjct: 185844 atcatttttgcttcattcatt 185824



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 260    atcatttttgcttcattcatt 280
              |||||||||||||||||||||
Sbjct: 110253 atcatttttgcttcattcatt 110233



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 260   atcatttttgcttcattcatt 280
             |||||||||||||||||||||
Sbjct: 88465 atcatttttgcttcattcatt 88445



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 260   atcatttttgcttcattcatt 280
             |||||||||||||||||||||
Sbjct: 78729 atcatttttgcttcattcatt 78709



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 260   atcatttttgcttcattcatt 280
             |||||||||||||||||||||
Sbjct: 47748 atcatttttgcttcattcatt 47728
to top
>ref|XM_841290.1| Trypanosoma brucei TREU927 retrotransposon hot spot protein, RHS4l
            (Tb927.1.120) partial mRNA
          Length = 2571

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 260  atcatttttgcttcattcatt 280
            |||||||||||||||||||||
Sbjct: 996  atcatttttgcttcattcatt 1016
to top
>ref|XM_946386.1| Trypanosoma brucei TREU927 retrotransposon hot spot (RHS) protein
            (Tb927.2.340) partial mRNA
          Length = 2577

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 260  atcatttttgcttcattcatt 280
            |||||||||||||||||||||
Sbjct: 996  atcatttttgcttcattcatt 1016
to top
>ref|XM_946390.1| Trypanosoma brucei TREU927 retrotransposon hot spot (RHS) protein
            (Tb927.2.450) partial mRNA
          Length = 2574

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 260  atcatttttgcttcattcatt 280
            |||||||||||||||||||||
Sbjct: 996  atcatttttgcttcattcatt 1016
to top
>ref|XM_946391.1| Trypanosoma brucei TREU927 retrotransposon hot spot (RHS) protein
            (Tb927.2.470) partial mRNA
          Length = 2583

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 260  atcatttttgcttcattcatt 280
            |||||||||||||||||||||
Sbjct: 999  atcatttttgcttcattcatt 1019
to top
>ref|XM_946393.1| Trypanosoma brucei TREU927 retrotransposon hot spot (RHS) protein
            (Tb927.2.560) partial mRNA
          Length = 2538

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 260  atcatttttgcttcattcatt 280
            |||||||||||||||||||||
Sbjct: 1017 atcatttttgcttcattcatt 1037
to top
>ref|XM_946404.1| Trypanosoma brucei TREU927 retrotransposon hot spot (RHS) protein
            (Tb927.2.1210) partial mRNA
          Length = 2526

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 260  atcatttttgcttcattcatt 280
            |||||||||||||||||||||
Sbjct: 1005 atcatttttgcttcattcatt 1025
to top
>emb|BX248585.1| Blochmannia floridanus complete genome; segment 2/3
          Length = 267050

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 137    ataatcaattatctaaagtaa 157
              |||||||||||||||||||||
Sbjct: 124173 ataatcaattatctaaagtaa 124193
to top
>emb|AL671259.1|TBH25N7 Trypanosoma brucei 221 VSG expression site BAC
          Length = 123706

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 260   atcatttttgcttcattcatt 280
             |||||||||||||||||||||
Sbjct: 57058 atcatttttgcttcattcatt 57078
to top
>emb|AL671256.1|TBN19B2 Trypanosoma brucei VO2 VSG expression site BAC
          Length = 137759

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 260   atcatttttgcttcattcatt 280
             |||||||||||||||||||||
Sbjct: 94855 atcatttttgcttcattcatt 94875



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 260   atcatttttgcttcattcatt 280
             |||||||||||||||||||||
Sbjct: 30295 atcatttttgcttcattcatt 30315
to top
>gb|AY046890.1| Trypanosoma brucei RHS4a (RHS4a) gene, complete cds
          Length = 9694

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 260  atcatttttgcttcattcatt 280
            |||||||||||||||||||||
Sbjct: 4445 atcatttttgcttcattcatt 4465
to top
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 101     cccgtacctaaatcattaacaaggg 125
               |||||| ||||||||||||||||||
Sbjct: 2368350 cccgtagctaaatcattaacaaggg 2368374
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>emb|CR974587.14| Pig DNA sequence from clone CH242-288P9 on chromosome 7, complete
              sequence
          Length = 165092

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 34     gctttgtccagaagcagcagc 54
              |||||||||||||||||||||
Sbjct: 141540 gctttgtccagaagcagcagc 141560
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>gb|AC155099.1| Medicago truncatula chromosome 7 BAC clone mth2-144f20, complete
             sequence
          Length = 132371

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 404   tgaagtgcttttgggcaagtaaaa 427
             ||||||||||||| ||||||||||
Sbjct: 55183 tgaagtgcttttgagcaagtaaaa 55206
to top
>gb|AC169819.2| Rhesus Macaque  BAC CH250-132C22 (Children's Hospital Oakland Research
             Institute Rhesus macaque Adult Male BAC Library) complete
             sequence
          Length = 176070

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 482   attccccaaaagaagaccat 501
             ||||||||||||||||||||
Sbjct: 28915 attccccaaaagaagaccat 28896
to top
>gb|AC112979.9| Mus musculus chromosome 3, clone RP24-530C22, complete sequence
          Length = 148599

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 362   acacaacactgacagcagaaggaa 385
             |||||||| |||||||||||||||
Sbjct: 86526 acacaacagtgacagcagaaggaa 86549
to top
>gb|AC130483.6| Mus musculus chromosome 15, clone RP24-137D10, complete sequence
          Length = 137626

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 520   agagtgaatgcaacagcatg 539
             ||||||||||||||||||||
Sbjct: 69064 agagtgaatgcaacagcatg 69083
to top
>gb|AC101984.13| Mus musculus chromosome 10, clone RP24-352K10, complete sequence
          Length = 167874

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    catttttgcttcattcattc 281
              ||||||||||||||||||||
Sbjct: 138273 catttttgcttcattcattc 138254
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 105      tacctaaatcattaacaagg 124
                ||||||||||||||||||||
Sbjct: 28529720 tacctaaatcattaacaagg 28529701
to top
>ref|XM_382306.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02130.1)
            partial mRNA
          Length = 6780

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 564  ttgagcaccttgagttttca 583
            ||||||||||||||||||||
Sbjct: 1856 ttgagcaccttgagttttca 1875
to top
>emb|AL031663.2|HS461P17 Human DNA sequence from clone RP3-461P17 on chromosome 20q12-13.2
             Contains two novel genes, the WFDC2 gene for WAP
             four-disulfide core domain 2, the RPL5P2 gene for
             ribosomal protein L5 pseudogene 2, a COX6C (Cytochrome C
             Oxidase subunit VIC) pseudogene, a pseudogene similar to
             part of heat shock 60kDa protein 1 (chaperonin) (HSPD1),
             the SPINT3 gene for Kunitz type serine protease inhibitor
             3 (HKIB9), the SPINLW1 gene for serine protease
             inhibitor-like with Kunitz and WAP domains 1 (eppin), the
             WFDC6 gene for WAP four-disulfide core domain 6, the 3'
             end for WFDC8 gene for WAP four-disulfide core domain 8
             and a CpG island, complete sequence
          Length = 127027

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 254   catagcatcatttttgcttcattc 277
             ||||||||||||||||||| ||||
Sbjct: 95660 catagcatcatttttgctttattc 95683
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>emb|AL590965.17| Human DNA sequence from clone RP11-185B12 on chromosome 1, complete
             sequence
          Length = 71382

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   ggcctctgtttctccagaaa 330
             ||||||||||||||||||||
Sbjct: 42060 ggcctctgtttctccagaaa 42079
to top
>emb|AL356095.11| Human DNA sequence from clone RP11-369J21 on chromosome 10 Contains a
              pseudogene similar to part of homeobox proteins, three
              nuclear DNA binding protein (C1D) pseudogenes, three novel
              genes, a ribosomal protein L22 (RPL22) pseudogene, the 3'
              end of the ANXA11 gene for annexin A11 and two CpG islands,
              complete sequence
          Length = 172079

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 443    tctgcattccacactcaatt 462
              ||||||||||||||||||||
Sbjct: 114281 tctgcattccacactcaatt 114262
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>gb|AE017160.1| Chlamydophila pneumoniae TW-183, section 4 of 4 of the complete genome
          Length = 324746

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 411   cttttgggcaagtaaaaatc 430
             ||||||||||||||||||||
Sbjct: 78926 cttttgggcaagtaaaaatc 78945
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>gb|AC159975.4| Mus musculus chromosome 3, clone RP24-204F16, complete sequence
          Length = 181930

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 362    acacaacactgacagcagaaggaa 385
              |||||||| |||||||||||||||
Sbjct: 126555 acacaacagtgacagcagaaggaa 126578
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>emb|AL021452.20|HS285F3 Human DNA sequence from clone CTA-285F3 on chromosome 22q12.1-12.3
            Contains a GSS, complete sequence
          Length = 8278

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 371  tgacagcagaaggaacagca 390
            ||||||||||||||||||||
Sbjct: 3150 tgacagcagaaggaacagca 3131
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>ref|XM_961740.1| PREDICTED: Tribolium castaneum similar to CG12559-PB.3 (LOC655225),
            mRNA
          Length = 1119

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 372  gacagcagaaggaacagcaacaag 395
            |||||||| |||||||||||||||
Sbjct: 1079 gacagcagcaggaacagcaacaag 1102
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>emb|AL096856.1|ATT24C20 Arabidopsis thaliana DNA chromosome 3, BAC clone T24C20
          Length = 103889

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   tcatttttgcttcattcatt 280
             ||||||||||||||||||||
Sbjct: 29935 tcatttttgcttcattcatt 29916
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>gb|AC026130.15| Homo sapiens chromosome 17, clone RP11-801J18, complete sequence
          Length = 182909

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 361   cacacaacactgacagcaga 380
             ||||||||||||||||||||
Sbjct: 12939 cacacaacactgacagcaga 12958
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>gb|AC025518.8| Homo sapiens chromosome 17, clone RP11-713H12, complete sequence
          Length = 176355

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 361   cacacaacactgacagcaga 380
             ||||||||||||||||||||
Sbjct: 76703 cacacaacactgacagcaga 76722
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>gb|AC145335.15| Pan troglodytes clone rp43-26k12, complete sequence
          Length = 208895

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 371   tgacagcagaaggaacagca 390
             ||||||||||||||||||||
Sbjct: 23398 tgacagcagaaggaacagca 23417
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>emb|BX537314.17| Zebrafish DNA sequence from clone CH211-120E1 in linkage group 19,
             complete sequence
          Length = 168538

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   tcatttttgcttcattcatt 280
             ||||||||||||||||||||
Sbjct: 42061 tcatttttgcttcattcatt 42080
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>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome
          Length = 1229853

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 411     cttttgggcaagtaaaaatc 430
               ||||||||||||||||||||
Sbjct: 1088650 cttttgggcaagtaaaaatc 1088631
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>gb|AC159214.2| Pan troglodytes BAC clone CH251-522M3 from chromosome unknown, complete
             sequence
          Length = 190101

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 371   tgacagcagaaggaacagca 390
             ||||||||||||||||||||
Sbjct: 58711 tgacagcagaaggaacagca 58730
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>gb|AF116276.1|AF116276 Trichomonas vaginalis surface immunogen P270 (p270) gene, complete
            cds
          Length = 2053

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 279  ttccttgaaatcgtccttgt 298
            ||||||||||||||||||||
Sbjct: 1645 ttccttgaaatcgtccttgt 1626
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>gb|AE002098.2| Neisseria meningitidis MC58, complete genome
          Length = 2272360

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 158  acaaacgcccttatcctgttttcc 181
            |||||||||||| |||||||||||
Sbjct: 2971 acaaacgcccttctcctgttttcc 2948
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>gb|AC091501.1|AC091501 Drosophila melanogaster, chromosome 2R, region 53D-53E, BAC clone
              BACR36P23, complete sequence
          Length = 198390

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 373    acagcagaaggaacagcaacaaga 396
              |||||||||||| |||||||||||
Sbjct: 132325 acagcagaaggagcagcaacaaga 132302
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 105      tacctaaatcattaacaagg 124
                ||||||||||||||||||||
Sbjct: 28621044 tacctaaatcattaacaagg 28621025
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>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete
              sequence
          Length = 143681

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    tacctaaatcattaacaagg 124
              ||||||||||||||||||||
Sbjct: 123850 tacctaaatcattaacaagg 123831
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>gb|AC157018.6| Mus musculus 10 BAC RP24-414A19 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 146007

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    catttttgcttcattcattc 281
              ||||||||||||||||||||
Sbjct: 144779 catttttgcttcattcattc 144798
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>gb|AC138336.3| Homo sapiens chromosome 17, clone CTC-386K3, complete sequence
          Length = 94400

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   tggggacatgaaaaatgctc 213
             ||||||||||||||||||||
Sbjct: 33997 tggggacatgaaaaatgctc 33978
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>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome
          Length = 1230230

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 411    cttttgggcaagtaaaaatc 430
              ||||||||||||||||||||
Sbjct: 982792 cttttgggcaagtaaaaatc 982811
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>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence
          Length = 1226565

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 411    cttttgggcaagtaaaaatc 430
              ||||||||||||||||||||
Sbjct: 982113 cttttgggcaagtaaaaatc 982132
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>emb|AL391262.3|CNS06C86 Human chromosome 14 DNA sequence BAC R-817G13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 171296

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 384   aacagcaacaagagggtttg 403
             ||||||||||||||||||||
Sbjct: 38786 aacagcaacaagagggtttg 38767
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>emb|BX323007.11| Zebrafish DNA sequence from clone CH211-262K23 in linkage group 19,
             complete sequence
          Length = 130807

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   tcatttttgcttcattcatt 280
             ||||||||||||||||||||
Sbjct: 36442 tcatttttgcttcattcatt 36461
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>gb|AE003806.3| Drosophila melanogaster chromosome 2R, section 44 of 73 of the complete
              sequence
          Length = 271179

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 373    acagcagaaggaacagcaacaaga 396
              |||||||||||| |||||||||||
Sbjct: 227869 acagcagaaggagcagcaacaaga 227846
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>gb|AF004355.1|AF004355 Trichomonas vaginalis surface immunogen P270 (p270) mRNA, partial
           cds, 3' non-repetitive region
          Length = 1267

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 279 ttccttgaaatcgtccttgt 298
           ||||||||||||||||||||
Sbjct: 793 ttccttgaaatcgtccttgt 774
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>gb|AC004289.1|AC004289 Drosophila melanogaster DNA sequence (P1 DS03646 (D170)), complete
             sequence
          Length = 81625

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 373   acagcagaaggaacagcaacaaga 396
             |||||||||||| |||||||||||
Sbjct: 26810 acagcagaaggagcagcaacaaga 26787
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>emb|AL357615.7|HS373D10 Homo sapiens chromosome 9 BAC RP11-373D10, complete sequence
          Length = 171446

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   atcatttttgcttcattcat 279
             ||||||||||||||||||||
Sbjct: 54119 atcatttttgcttcattcat 54138
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>dbj|AP001166.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-865B13, complete
             sequence
          Length = 104600

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   tgcttcattcattccttgaa 287
             ||||||||||||||||||||
Sbjct: 88922 tgcttcattcattccttgaa 88903
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>dbj|AP006639.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT25N16, TM0216,
             complete sequence
          Length = 95667

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   ccaataatcaattatctaaa 153
             ||||||||||||||||||||
Sbjct: 91685 ccaataatcaattatctaaa 91666
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>emb|AL391667.19| Human DNA sequence from clone RP11-214L15 on chromosome 9, complete
             sequence
          Length = 110444

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   atcatttttgcttcattcat 279
             ||||||||||||||||||||
Sbjct: 21436 atcatttttgcttcattcat 21455


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,700,504
Number of Sequences: 3902068
Number of extensions: 6700504
Number of successful extensions: 132550
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 132137
Number of HSP's gapped (non-prelim): 408
length of query: 642
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 619
effective length of database: 17,143,297,704
effective search space: 10611701278776
effective search space used: 10611701278776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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