ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags7o15 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ296273.1|HVU296273 Hordeum vulgare aba7 gene for stress responsive protein Length = 1841 Score = 1160 bits (585), Expect = 0.0 Identities = 645/659 (97%), Gaps = 7/659 (1%) Strand = Plus / Minus Query: 1 acaaagtgcagacagtt-agacatacacatgttgctaacaaaaactcaaccgactatgac 59 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || Sbjct: 1814 acaaagtgcagacagttcagacatacacatgttgctaacaaaaactcaaccgactataac 1755 Query: 60 tcgtacaacgata--tacgctgcaaggagcgcataattttattcattacaatacaataca 117 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1754 tcgtacaacgatcagtacgctgcaaggagcgcataattttattcattacaatacaataca 1695 Query: 118 cacaagtacgaaatgcaaatacgtagctgccagcagcactaactccagggcttgttgcat 177 || || ||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1694 ca--agatcgaaatgcaaatacg-agctgccagcagcactaactccagggcttgttgcat 1638 Query: 178 ttcttcatgaacggaagcaaggattttggcgctccatcctagccaatgcttcgcgtatct 237 || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1637 ttgttcatgaacggaagcaaggattttggcgctccatcctagccaatgcttcacgtatct 1578 Query: 238 ctctgataccttgcatcgcctctcccaggtcgctccttagacgccggatctctgtgctga 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1577 ctctgataccttgcatcgcctctcccaggtcgctccttagacgccggatctctgtgctga 1518 Query: 298 gataggacatcctctgatccatgttcctactcaaatctgccaggattgcaacctgttcat 357 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1517 gataggacatcctctgatccatgttcctactcagatctgccaggattgcaacctgttcat 1458 Query: 358 gggtctcatggccttccaattgctcagaaatttcacgaggcagtcgctttatcagctctt 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1457 gggtctcatggccttccaattgctcagaaatttcacgaggcagtcgctttatcagctctt 1398 Query: 418 ttattttttcaacatctttctctactttgatttgattgatcacctcatcatgatcgctgc 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1397 ttattttttcaacatctttctctactttgatttgattgatcacctcatcatgatcgctgc 1338 Query: 478 ctatgtcactgccaagcttgttcagtaaaaacaagtttgtccagttgagctgcttatgct 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1337 ctatgtcactgccaagcttgttcagtaaaaacaagtttgtccagttgagctgcttatgct 1278 Query: 538 ccccaaagcccccttcaccagcgattatgaaaggcacaaattttccataaggcccaccca 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1277 ccccaaagcccccttcaccagcgattatgaaaggcacaaattttccataaggcccaccca 1218 Query: 598 gatcaaggtagctgtttgatggaagctccctacgctcgaaattgggaagtcctaactcc 656 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1217 gatcaaggtagctgtttgatggaagctccctacgctcgaaatt-ggaagtcctaactcc 1160
>emb|X69817.1|HVABA7 H.vulgare ABA7 mRNA for ABA-induced protein Length = 841 Score = 1160 bits (585), Expect = 0.0 Identities = 645/659 (97%), Gaps = 7/659 (1%) Strand = Plus / Minus Query: 1 acaaagtgcagacagtt-agacatacacatgttgctaacaaaaactcaaccgactatgac 59 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || Sbjct: 814 acaaagtgcagacagttcagacatacacatgttgctaacaaaaactcaaccgactataac 755 Query: 60 tcgtacaacgata--tacgctgcaaggagcgcataattttattcattacaatacaataca 117 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 tcgtacaacgatcagtacgctgcaaggagcgcataattttattcattacaatacaataca 695 Query: 118 cacaagtacgaaatgcaaatacgtagctgccagcagcactaactccagggcttgttgcat 177 || || ||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 694 ca--agatcgaaatgcaaatacg-agctgccagcagcactaactccagggcttgttgcat 638 Query: 178 ttcttcatgaacggaagcaaggattttggcgctccatcctagccaatgcttcgcgtatct 237 || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 637 ttgttcatgaacggaagcaaggattttggcgctccatcctagccaatgcttcacgtatct 578 Query: 238 ctctgataccttgcatcgcctctcccaggtcgctccttagacgccggatctctgtgctga 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 577 ctctgataccttgcatcgcctctcccaggtcgctccttagacgccggatctctgtgctga 518 Query: 298 gataggacatcctctgatccatgttcctactcaaatctgccaggattgcaacctgttcat 357 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 517 gataggacatcctctgatccatgttcctactcagatctgccaggattgcaacctgttcat 458 Query: 358 gggtctcatggccttccaattgctcagaaatttcacgaggcagtcgctttatcagctctt 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 457 gggtctcatggccttccaattgctcagaaatttcacgaggcagtcgctttatcagctctt 398 Query: 418 ttattttttcaacatctttctctactttgatttgattgatcacctcatcatgatcgctgc 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 ttattttttcaacatctttctctactttgatttgattgatcacctcatcatgatcgctgc 338 Query: 478 ctatgtcactgccaagcttgttcagtaaaaacaagtttgtccagttgagctgcttatgct 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 337 ctatgtcactgccaagcttgttcagtaaaaacaagtttgtccagttgagctgcttatgct 278 Query: 538 ccccaaagcccccttcaccagcgattatgaaaggcacaaattttccataaggcccaccca 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 ccccaaagcccccttcaccagcgattatgaaaggcacaaattttccataaggcccaccca 218 Query: 598 gatcaaggtagctgtttgatggaagctccctacgctcgaaattgggaagtcctaactcc 656 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 217 gatcaaggtagctgtttgatggaagctccctacgctcgaaatt-ggaagtcctaactcc 160
>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence Length = 1618915 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 430 catctttctctactttgatttgattgatc 458 |||||| || ||||||||||||||||||| Sbjct: 1582675 catcttactttactttgatttgattgatc 1582647
>gb|AC084397.5| Trypanosoma brucei chromosome 6 clone RPCI93-1I18, complete sequence Length = 169543 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 430 catctttctctactttgatttgattgatc 458 |||||| || ||||||||||||||||||| Sbjct: 133303 catcttactttactttgatttgattgatc 133275
>gb|AC128700.4| Mus musculus BAC clone RP24-130A20 from chromosome 8, complete sequence Length = 161757 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 414 tcttttattttttcaacatctttct 438 |||||||||||||||| |||||||| Sbjct: 89421 tcttttattttttcaaaatctttct 89397
>gb|AC116489.6| Mus musculus chromosome 18, clone RP24-137L16, complete sequence Length = 198242 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 497 gttcagtaaaaacaagtttgtccag 521 ||||||||||||||||| ||||||| Sbjct: 34562 gttcagtaaaaacaagtgtgtccag 34586
>emb|AL049545.6|HSDJ263J7 Human DNA sequence from clone RP1-263J7 on chromosome 6q14.3-15 Contains an 60S Ribosomal Protein L7 (RPL7) pseudogene and a RAB1, member RAS oncogene family (RAB1) pseudogene, complete sequence Length = 104081 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 434 tttctctactttgatttgattgatc 458 ||||||||||||||| ||||||||| Sbjct: 70787 tttctctactttgatctgattgatc 70811
>emb|BX251411.1| Tropheryma whipplei TW08/27, complete genome; segment 2/3 Length = 299050 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 403 gctttatcagctcttttattttttc 427 |||| |||||||||||||||||||| Sbjct: 165908 gcttcatcagctcttttattttttc 165884
>gb|AC103988.7| Homo sapiens chromosome 15, clone RP11-618N24, complete sequence Length = 192400 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 attacaatacaatacacacaa 122 ||||||||||||||||||||| Sbjct: 147074 attacaatacaatacacacaa 147094
>gb|AC073607.19| Homo sapiens 12 BAC RP11-462G20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165085 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 430 catctttctctactttgattt 450 ||||||||||||||||||||| Sbjct: 16776 catctttctctactttgattt 16796
>dbj|D00184.1|STASCAG Staphylococcus aureus gene for staphylocoagulase, complete cds Length = 3042 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 419 tattttttcaacatctttctc 439 ||||||||||||||||||||| Sbjct: 646 tattttttcaacatctttctc 626
>emb|AJ311974.1|SAU311974 Staphylococcus aureus partial coa gene for coagulase, strain NTCT1803 Length = 1377 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 419 tattttttcaacatctttctc 439 ||||||||||||||||||||| Sbjct: 411 tattttttcaacatctttctc 391
>gb|AE014184.1| Tropheryma whipplei str. Twist, complete genome Length = 927303 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 403 gctttatcagctcttttattttttc 427 |||| |||||||||||||||||||| Sbjct: 403455 gcttcatcagctcttttattttttc 403479
>emb|BX248238.5| Zebrafish DNA sequence from clone CH211-169J21 in linkage group 20, complete sequence Length = 158302 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 tacaatacaatacacacaagt 124 ||||||||||||||||||||| Sbjct: 154150 tacaatacaatacacacaagt 154170
>emb|BX469885.9| Zebrafish DNA sequence from clone DKEY-164N2 in linkage group 19, complete sequence Length = 87215 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 tttctctactttgatttgatt 454 ||||||||||||||||||||| Sbjct: 2385 tttctctactttgatttgatt 2365
>gb|AF488712.1| Mycoplasma synoviae clone KF6B lipoprotein hemagglutinin (vlhA) gene, partial cds Length = 2199 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 agctcttttattttttcaac 430 |||||||||||||||||||| Sbjct: 2045 agctcttttattttttcaac 2026
>gb|AC158148.5| Mus musculus chromosome 1, clone RP24-353B6, complete sequence Length = 158895 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 cagacagttagacatacaca 28 |||||||||||||||||||| Sbjct: 66669 cagacagttagacatacaca 66650
>gb|DQ180962.1| Erwinia pyrifoliae hrp gene cluster, partial sequence; and unknown genes Length = 28886 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 410 cagctcttttattttttcaacatc 433 |||||||||||||| ||||||||| Sbjct: 20333 cagctcttttatttcttcaacatc 20310
>gb|AC124806.11| Mus musculus chromosome 1, clone RP24-282F20, complete sequence Length = 153901 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 cagacagttagacatacaca 28 |||||||||||||||||||| Sbjct: 9860 cagacagttagacatacaca 9841
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 444 ttgatttgattgatcacctcatca 467 ||||||||||||||||||| |||| Sbjct: 1933851 ttgatttgattgatcacctgatca 1933874
>gb|AC148980.6| Mus musculus BAC clone RP23-230C16 from chromosome 7, complete sequence Length = 192433 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 416 ttttattttttcaacatctttctctact 443 |||| |||| |||||||||||||||||| Sbjct: 99545 ttttgttttctcaacatctttctctact 99518
>emb|CR974429.7| Mouse DNA sequence from clone RP23-177B9 on chromosome 12, complete sequence Length = 212593 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 acatacacatgttgctaaca 39 |||||||||||||||||||| Sbjct: 127884 acatacacatgttgctaaca 127903
>ref|XM_382578.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02402.1) partial mRNA Length = 1194 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 tcgctgcctatgtcactgcc 490 |||||||||||||||||||| Sbjct: 386 tcgctgcctatgtcactgcc 405
>gb|AC110534.11| Mus musculus chromosome 17, clone RP23-174D11, complete sequence Length = 174600 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 416 ttttattttttcaacatctttctctact 443 |||| |||| |||||||||||||||||| Sbjct: 96106 ttttgttttctcaacatctttctctact 96079
>gb|AC102590.9| Mus musculus chromosome 12, clone RP23-335D14, complete sequence Length = 202328 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 acatacacatgttgctaaca 39 |||||||||||||||||||| Sbjct: 191215 acatacacatgttgctaaca 191234
>ref|XM_501986.1| Yarrowia lipolytica CLIB122, YALI0C18689g predicted mRNA Length = 3075 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 acgtagctgccagcagcact 157 |||||||||||||||||||| Sbjct: 1726 acgtagctgccagcagcact 1707
>emb|AL161900.8| Human DNA sequence from clone RP11-479J22 on chromosome 13, complete sequence Length = 31248 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 cacatgttgctaacaaaaac 44 |||||||||||||||||||| Sbjct: 1211 cacatgttgctaacaaaaac 1192
>emb|AL137185.7| Human DNA sequence from clone RP1-64L14 on chromosome 6, complete sequence Length = 41503 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 acatacacatgttgctaacaaaaa 43 ||||||| |||||||||||||||| Sbjct: 33292 acatacaaatgttgctaacaaaaa 33315
>emb|AL050333.18|HSDJ93K22 Human DNA sequence from clone RP1-93K22 on chromosome 6q14.1-15.3 Contains the gene for a novel BTB/POZ domain containing protein (KIAA1417) and a CpG island, complete sequence Length = 113804 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ataattttattcattacaat 109 |||||||||||||||||||| Sbjct: 56369 ataattttattcattacaat 56388
>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06, complete sequence Length = 122218 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 444 ttgatttgattgatcacctcatca 467 ||||||||||||||||||| |||| Sbjct: 41560 ttgatttgattgatcacctgatca 41537
>emb|BX571862.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 4/17 Length = 349519 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 tcagtaaaaacaagtttgtc 518 |||||||||||||||||||| Sbjct: 30096 tcagtaaaaacaagtttgtc 30115
>emb|CR749745.16| Zebrafish DNA sequence from clone DKEY-7O20 in linkage group 5, complete sequence Length = 110199 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 ctcttttattttttcaacat 432 |||||||||||||||||||| Sbjct: 65388 ctcttttattttttcaacat 65369
>emb|CR388147.13| Zebrafish DNA sequence from clone DKEYP-72E1 in linkage group 3, complete sequence Length = 194517 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 ttattcattacaatacaatacaca 119 ||||||| |||||||||||||||| Sbjct: 64599 ttattcaatacaatacaatacaca 64622
>gb|AC164561.2| Mus musculus BAC clone RP23-187G5 from chromosome 12, complete sequence Length = 210186 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 ttacaatacaatacacacaa 122 |||||||||||||||||||| Sbjct: 113721 ttacaatacaatacacacaa 113740
>emb|BX530068.35| Zebrafish DNA sequence from clone CH211-1N9 in linkage group 13, complete sequence Length = 185626 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 cagacagttagacatacaca 28 |||||||||||||||||||| Sbjct: 83678 cagacagttagacatacaca 83697
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 172 ttgcatttcttcatgaacggaagcaagg 199 |||||||||||||||| || |||||||| Sbjct: 1294644 ttgcatttcttcatgatcgcaagcaagg 1294617
>gb|DP000058.1| Felis catus target 117 genomic scaffold Length = 458092 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 tgcctatgtcactgccaagcttgt 498 ||||||||||||| |||||||||| Sbjct: 48863 tgcctatgtcactaccaagcttgt 48886
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 Length = 1779707 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 tttctctactttgatttgat 453 |||||||||||||||||||| Sbjct: 1718869 tttctctactttgatttgat 1718850
>dbj|AB188196.1| Botryotinia fuckeliana bcg3 gene for G protein alpha subunit, complete cds Length = 5232 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 tttattcattacaatacaat 114 |||||||||||||||||||| Sbjct: 4553 tttattcattacaatacaat 4572
>ref|XM_631533.1| Dictyostelium discoideum AX4 hypothetical protein (DDB0191153), partial mRNA Length = 498 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 418 ttattttttcaacatctttctcta 441 ||||||||||||||||||| |||| Sbjct: 46 ttattttttcaacatctttttcta 23
>gb|AF120501.1|AF120501 Ancylostoma ceylanicum cysteine proteinase mRNA, complete cds Length = 1100 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 ttttcaacatctttctctac 442 |||||||||||||||||||| Sbjct: 117 ttttcaacatctttctctac 98
>gb|AC127352.5| Mus musculus BAC clone RP23-81P4 from chromosome 7, complete sequence Length = 196031 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 416 ttttattttttcaacatctttctctact 443 |||| |||| |||||||||||||||||| Sbjct: 159667 ttttgttttctcaacatctttctctact 159694
>dbj|AK052078.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230043N15 product:unclassifiable, full insert sequence Length = 3550 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 cagacagttagacatacaca 28 |||||||||||||||||||| Sbjct: 412 cagacagttagacatacaca 431
>ref|NM_066767.3| Caenorhabditis elegans R10E11.5 (R10E11.5) mRNA, complete cds Length = 1706 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 ttttttcaacatctttctctactt 444 |||||||||||||||||| ||||| Sbjct: 1267 ttttttcaacatctttctttactt 1244
>gb|AC011703.8|AC011703 Drosophila melanogaster, chromosome X, region 16A-16B, BAC clone BACR35P18, complete sequence Length = 163307 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ttacaatacaatacacacaa 122 |||||||||||||||||||| Sbjct: 33603 ttacaatacaatacacacaa 33584
>gb|AC011702.10|AC011702 Drosophila melanogaster, chromosome X, region 15F-16A, BAC clone BACR42I14, complete sequence Length = 167688 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ttacaatacaatacacacaa 122 |||||||||||||||||||| Sbjct: 47250 ttacaatacaatacacacaa 47231
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 444 ttgatttgattgatcacctcatca 467 ||||||||||||||||||| |||| Sbjct: 1933849 ttgatttgattgatcacctgatca 1933872
>gb|AF195902.1|AF195902 Lactobacillus johnsonii prophage Lj928 late gene cluster sequence Length = 7120 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 agtcgctttatcagctcttttatt 422 |||||||||||||||| ||||||| Sbjct: 2265 agtcgctttatcagcttttttatt 2242
>gb|AF339098.1|AF339098 Ancylostoma ceylanicum cathepsin b-like precursor protein mRNA, partial cds Length = 555 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 ttttcaacatctttctctac 442 |||||||||||||||||||| Sbjct: 113 ttttcaacatctttctctac 94
>gb|AF288090.1| Rhodomonas salina mitochondrial DNA, complete genome Length = 48063 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 498 ttcagtaaaaacaagtttgt 517 |||||||||||||||||||| Sbjct: 33486 ttcagtaaaaacaagtttgt 33467
>gb|AF494013.1| Phytophthora infestans putative endo-1,3-beta-glucanase (endo1) gene, complete cds Length = 3149 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 617 tggaagctccctacgctcga 636 |||||||||||||||||||| Sbjct: 1841 tggaagctccctacgctcga 1860
>gb|AC083874.2|AC083874 Homo sapiens chromosome 7 clone RP11-792L21, complete sequence Length = 186281 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 566 gaaaggcacaaattttccat 585 |||||||||||||||||||| Sbjct: 99084 gaaaggcacaaattttccat 99103
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 cttttattttttcaacatct 434 |||||||||||||||||||| Sbjct: 696232 cttttattttttcaacatct 696213
>emb|BX321890.5| Zebrafish DNA sequence from clone CH211-258D5 in linkage group 5, complete sequence Length = 147231 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 ctcttttattttttcaacat 432 |||||||||||||||||||| Sbjct: 126241 ctcttttattttttcaacat 126260
>gb|AE003506.3| Drosophila melanogaster chromosome X, section 58 of 74 of the complete sequence Length = 302073 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ttacaatacaatacacacaa 122 |||||||||||||||||||| Sbjct: 68446 ttacaatacaatacacacaa 68427
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 414 tcttttattttttcaacatctttctcta 441 |||||||||||||||||| |||| |||| Sbjct: 113267 tcttttattttttcaacaactttttcta 113294
>emb|CT033780.10| Mouse DNA sequence from clone RP24-329E14 on chromosome 12, complete sequence Length = 205515 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 ttacaatacaatacacacaa 122 |||||||||||||||||||| Sbjct: 196002 ttacaatacaatacacacaa 196021
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 acgtagctgccagcagcact 157 |||||||||||||||||||| Sbjct: 2565734 acgtagctgccagcagcact 2565753
>emb|AL583884.20| Mouse DNA sequence from clone RP23-324B16 on chromosome 15, complete sequence Length = 202342 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 atggccttccaattgctcagaaat 388 ||||||||||||||| |||||||| Sbjct: 167217 atggccttccaattggtcagaaat 167240
>dbj|AB070451.1| Dictyostelium discoideum cbpH mRNA for calcium binding protein CBP8, complete cds, clone:SSD753 Length = 655 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 418 ttattttttcaacatctttctcta 441 ||||||||||||||||||| |||| Sbjct: 74 ttattttttcaacatctttttcta 51
>gb|L23858.1|YSJATPASEA Yarrowia lipolytica ATPase (PAY4) gene, complete cds Length = 4567 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 acgtagctgccagcagcact 157 |||||||||||||||||||| Sbjct: 2722 acgtagctgccagcagcact 2703 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,949,637 Number of Sequences: 3902068 Number of extensions: 6949637 Number of successful extensions: 131411 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 131054 Number of HSP's gapped (non-prelim): 347 length of query: 656 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 633 effective length of database: 17,143,297,704 effective search space: 10851707446632 effective search space used: 10851707446632 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
