ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags7o12 |
|---|---|
| Clone Library Name | barley_pub |
>IF37_ARATH (P56820) Eukaryotic translation initiation factor 3 subunit 7| (eIF-3 zeta) (eIF3d) (p66) Length = 591 Score = 243 bits (620), Expect = 3e-64 Identities = 112/141 (79%), Positives = 131/141 (92%) Frame = -2 Query: 606 KQKLESQRGAVLATELKNNANKLARWTAQALLSGADMMKLGYVSRVHPRDHFNHSILTVM 427 +QKLE+QRGAVLATELKNN NKLA+WTAQALL+ ADMMK+G+VSRVHPRDHFNH IL+V+ Sbjct: 429 RQKLETQRGAVLATELKNNGNKLAKWTAQALLANADMMKIGFVSRVHPRDHFNHVILSVL 488 Query: 426 GYKPRDFATQINLNTANMWGIVKSIVDICMKFEEGKYVLVKDPAKPQMRIYQVPNDAFEN 247 GYKP+DFA QINLNT+NMWGIVKSIVD+CMK EGKYVLVKDP+KPQ+RIY+VP DAFEN Sbjct: 489 GYKPKDFAGQINLNTSNMWGIVKSIVDLCMKLSEGKYVLVKDPSKPQVRIYEVPPDAFEN 548 Query: 246 DYVEEPLPEEEQVRPATDDVD 184 DYVEEPLPE+EQV+P ++ + Sbjct: 549 DYVEEPLPEDEQVQPTEENTE 569
>IF37_HUMAN (O15371) Eukaryotic translation initiation factor 3 subunit 7| (eIF-3 zeta) (eIF3 p66) (eIF3d) Length = 548 Score = 160 bits (405), Expect = 3e-39 Identities = 74/132 (56%), Positives = 100/132 (75%) Frame = -2 Query: 606 KQKLESQRGAVLATELKNNANKLARWTAQALLSGADMMKLGYVSRVHPRDHFNHSILTVM 427 +QKL+SQRGAV+ATELKNN+ KLARWT ALL+G++ +KLGYVSR H +D H IL Sbjct: 410 RQKLDSQRGAVIATELKNNSYKLARWTCCALLAGSEYLKLGYVSRYHVKDSSRHVILGTQ 469 Query: 426 GYKPRDFATQINLNTANMWGIVKSIVDICMKFEEGKYVLVKDPAKPQMRIYQVPNDAFEN 247 +KP +FA+QINL+ N WGI++ ++DICMK EEGKY+++KDP K +R+Y +P+ F + Sbjct: 470 QFKPNEFASQINLSVENAWGILRCVIDICMKLEEGKYLILKDPNKQVIRVYSLPDGTFSS 529 Query: 246 DYVEEPLPEEEQ 211 D EE EEE+ Sbjct: 530 DEDEEEEEEEEE 541
>IF37_MOUSE (O70194) Eukaryotic translation initiation factor 3 subunit 7| (eIF-3 zeta) (eIF3 p66) (eIF3d) Length = 547 Score = 159 bits (401), Expect = 8e-39 Identities = 73/132 (55%), Positives = 100/132 (75%) Frame = -2 Query: 606 KQKLESQRGAVLATELKNNANKLARWTAQALLSGADMMKLGYVSRVHPRDHFNHSILTVM 427 +QKL+SQRGAV+ATELKNN+ KLARWT ALL+G++ +KLGYVSR H +D H IL Sbjct: 409 RQKLDSQRGAVIATELKNNSYKLARWTCCALLAGSEYLKLGYVSRYHVKDSSRHVILGTQ 468 Query: 426 GYKPRDFATQINLNTANMWGIVKSIVDICMKFEEGKYVLVKDPAKPQMRIYQVPNDAFEN 247 +KP +FA+QINL+ N WGI++ ++DICMK EEGKY+++KDP K +R+Y +P+ F + Sbjct: 469 QFKPNEFASQINLSVENAWGILRCVIDICMKLEEGKYLILKDPNKQVIRVYSLPDGTFSS 528 Query: 246 DYVEEPLPEEEQ 211 + EE EEE+ Sbjct: 529 EEDEEDEEEEEE 540
>IF37_SCHPO (O94236) Eukaryotic translation initiation factor 3 subunit 7| homolog (Microtubule-destabilizing protein moe1) Length = 567 Score = 154 bits (388), Expect = 2e-37 Identities = 71/119 (59%), Positives = 94/119 (78%) Frame = -2 Query: 606 KQKLESQRGAVLATELKNNANKLARWTAQALLSGADMMKLGYVSRVHPRDHFNHSILTVM 427 + KLESQRGAV ATE+KNN+ KLARWT +ALL+G D MK+G+VSR + RD +H IL V+ Sbjct: 436 RSKLESQRGAVFATEMKNNSCKLARWTVEALLAGVDSMKVGFVSRSNARDAQHHGILGVV 495 Query: 426 GYKPRDFATQINLNTANMWGIVKSIVDICMKFEEGKYVLVKDPAKPQMRIYQVPNDAFE 250 YKP D A+Q+NL+ +N WGIV++I D+C+K +GKYVLVKDP +P +R+Y VP + FE Sbjct: 496 AYKPADLASQMNLSLSNGWGIVRTIADVCLKMPDGKYVLVKDPNRPILRLYSVPPNTFE 554
>IF37_CAEEL (P30642) Putative eukaryotic translation initiation factor 3| subunit 7 (eIF-3 zeta) (eIF3d) Length = 570 Score = 139 bits (349), Expect = 8e-33 Identities = 64/121 (52%), Positives = 89/121 (73%) Frame = -2 Query: 606 KQKLESQRGAVLATELKNNANKLARWTAQALLSGADMMKLGYVSRVHPRDHFNHSILTVM 427 + KL+ Q+GAV+ATE+KNN+ K+A+WT QALL+G+D MKLGYVSR + R NHSIL Sbjct: 437 RTKLDVQKGAVMATEIKNNSAKVAKWTLQALLAGSDTMKLGYVSRNNARSTQNHSILLTQ 496 Query: 426 GYKPRDFATQINLNTANMWGIVKSIVDICMKFEEGKYVLVKDPAKPQMRIYQVPNDAFEN 247 KP +FA+ I LN N WGI++ ++D CMK + GKY+L+KDP P +R+Y +P FE+ Sbjct: 497 YVKPTEFASNIALNMDNCWGILRCVIDSCMKQKPGKYLLMKDPQSPVIRLYSLPEGTFES 556 Query: 246 D 244 + Sbjct: 557 E 557
>AKR1_GIBZE (Q4I8B6) Palmitoyltransferase AKR1 (EC 2.3.1.-) (Ankyrin| repeat-containing protein AKR1) Length = 702 Score = 32.0 bits (71), Expect = 1.4 Identities = 19/57 (33%), Positives = 23/57 (40%) Frame = -1 Query: 508 WRGHDEVGLCVSCAPPRPLQPLHTHCHGLQAKRFCYPDQPQHCKHVGNCQVDCGHMH 338 W+ +DE CV+C PL+ HC Q C HC V NC H H Sbjct: 422 WK-YDETNFCVTCMIQTPLR--SKHCRRCQR---CVAKHDHHCPWVYNCVGINNHRH 472
>MUC13_RAT (P97881) Mucin-13 precursor| Length = 547 Score = 32.0 bits (71), Expect = 1.4 Identities = 26/77 (33%), Positives = 34/77 (44%) Frame = -3 Query: 605 SRSSSPSAVPCLLQSSRTMPTSSLAGLPRLYYLART**SWVMCLVCTPATTSTTPYSLSW 426 S+SS ++ P ++ T PTS+ P L T TP TT+T P S S Sbjct: 2 SQSSGGTSTPT---TTATQPTSTSTQTPGTTQLLST--------TSTPTTTATQPTSTST 50 Query: 425 ATSQEILLPRSTSTLQT 375 T LP +TST T Sbjct: 51 QTPGTTQLPSTTSTPTT 67 Score = 30.4 bits (67), Expect = 4.2 Identities = 22/63 (34%), Positives = 27/63 (42%) Frame = -3 Query: 563 SSRTMPTSSLAGLPRLYYLART**SWVMCLVCTPATTSTTPYSLSWATSQEILLPRSTST 384 ++ T PT + P L T TP TT+T P S S+ T LP STST Sbjct: 67 TTATQPTXTSTQTPGTTQLPGT--------TSTPTTTATQPTSTSFQTPGTTQLPSSTST 118 Query: 383 LQT 375 T Sbjct: 119 PTT 121
>FRAS1_MOUSE (Q80T14) Extracellular matrix protein FRAS1 precursor| Length = 4010 Score = 32.0 bits (71), Expect = 1.4 Identities = 31/109 (28%), Positives = 39/109 (35%), Gaps = 19/109 (17%) Frame = -1 Query: 553 QCQQARSL--------DCPGFTIWRGH-DEVGLCVSCAPPRPLQPLHTHCHGLQAKRFCY 401 +CQ AR L +CP GH E G C +C H+ C R C Sbjct: 828 KCQHARHLLLGDHCVPECPP-----GHYKERGTCKTC---------HSSC------RSCQ 867 Query: 400 PDQPQHCK---------HVGNCQVDCGHMHEV*RGQVC-ACERSCQATD 284 P C H+G C C H + QVC C R C++ D Sbjct: 868 NGGPFSCSSCDTGLVLTHIGTCSTACFPGHYLDDNQVCQPCNRHCRSCD 916
>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor| Length = 1161 Score = 31.6 bits (70), Expect = 1.9 Identities = 23/85 (27%), Positives = 39/85 (45%) Frame = -3 Query: 599 SSSPSAVPCLLQSSRTMPTSSLAGLPRLYYLART**SWVMCLVCTPATTSTTPYSLSWAT 420 +S+ S P +S T TS+ + P + T + T +TTSTTP + + +T Sbjct: 164 TSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTST 223 Query: 419 SQEILLPRSTSTLQTCGELSSRLWT 345 + +TST T + S++ T Sbjct: 224 TPTTSTTPTTSTTSTTSQTSTKSTT 248
>AKR1_ASPOR (Q7Z8U2) Palmitoyltransferase akr1 (EC 2.3.1.-) (Ankyrin| repeat-containing protein akr1) Length = 737 Score = 31.2 bits (69), Expect = 2.4 Identities = 20/61 (32%), Positives = 25/61 (40%) Frame = -1 Query: 544 QARSLDCPGFTIWRGHDEVGLCVSCAPPRPLQPLHTHCHGLQAKRFCYPDQPQHCKHVGN 365 Q R++ F W+ DE CVSC RPL+ HC C HC + N Sbjct: 437 QQRAVITELFEQWK-FDEENFCVSCMVRRPLR--SKHCKRCAR---CVAKHDHHCPWIDN 490 Query: 364 C 362 C Sbjct: 491 C 491
>PCSK6_RAT (Q63415) Proprotein convertase subtilisin/kexin type 6 precursor| (EC 3.4.21.-) (Paired basic amino acid cleaving enzyme 4) (Subtilisin/kexin-like protease PACE4) (Subtilisin-like proprotein convertase 4) (SPC4) Length = 937 Score = 31.2 bits (69), Expect = 2.4 Identities = 26/90 (28%), Positives = 33/90 (36%), Gaps = 12/90 (13%) Frame = -1 Query: 583 RCRACYRAQEQCQQARSLDCPGFTIWRG---HDEVGLCVSCAP----PRPLQPLHTHCHG 425 RCR C++ E C C + RG H E CV+ P Q L CH Sbjct: 713 RCRRCHKGCETCTGRSPTQC--LSCRRGFYHHQETNTCVTLCPAGLYADESQRLCLRCHP 770 Query: 424 LQAKRFCYPDQPQHCKH-----VGNCQVDC 350 K P++ CK G+C DC Sbjct: 771 SCQKCVDEPEKSTVCKEGFSLARGSCIPDC 800
>PFA4_NEUCR (Q7SCY6) Palmitoyltransferase PFA4 (EC 2.3.1.-) (Protein fatty| acyltransferase 4) Length = 486 Score = 30.8 bits (68), Expect = 3.2 Identities = 16/48 (33%), Positives = 18/48 (37%) Frame = -1 Query: 505 RGHDEVGLCVSCAPPRPLQPLHTHCHGLQAKRFCYPDQPQHCKHVGNC 362 RG + C C P+P P HC C P HC GNC Sbjct: 96 RGPQKAKWCKKCDAPKP--PRAHHCRHCAR---CIPRMDHHCPWTGNC 138
>AKR1_NEUCR (Q7S3M5) Palmitoyltransferase AKR1 (EC 2.3.1.-) (Ankyrin| repeat-containing protein AKR1) Length = 729 Score = 30.4 bits (67), Expect = 4.2 Identities = 19/59 (32%), Positives = 24/59 (40%) Frame = -1 Query: 514 TIWRGHDEVGLCVSCAPPRPLQPLHTHCHGLQAKRFCYPDQPQHCKHVGNCQVDCGHMH 338 ++W+ DE CV+C PL+ HC Q C HC V NC H H Sbjct: 432 SLWK-FDESNFCVTCMIRTPLR--SKHCRRCQR---CVAKHDHHCPWVYNCIGVNNHRH 484
>ZDH13_MOUSE (Q9CWU2) Probable palmitoyltransferase ZDHHC13 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 13) (DHHC-13) (Huntingtin-interacting protein 14-related protein) (HIP14-related protein) Length = 622 Score = 30.4 bits (67), Expect = 4.2 Identities = 17/50 (34%), Positives = 20/50 (40%) Frame = -1 Query: 481 CVSCAPPRPLQPLHTHCHGLQAKRFCYPDQPQHCKHVGNCQVDCGHMHEV 332 C SC +PL+ LH H RF QHC G C H H + Sbjct: 428 CTSCLIRKPLRSLHCHVCNSCVARF-----DQHCFWTGRCIGFGNHHHYI 472
>PCSK6_HUMAN (P29122) Proprotein convertase subtilisin/kexin type 6 precursor (EC| 3.4.21.-) (Paired basic amino acid cleaving enzyme 4) (Subtilisin/kexin-like protease PACE4) (Subtilisin-like proprotein convertase 4) (SPC4) Length = 969 Score = 30.0 bits (66), Expect = 5.4 Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 12/90 (13%) Frame = -1 Query: 583 RCRACYRAQEQCQQARSLDCPGFTIWRG---HDEVGLCVSCAP----PRPLQPLHTHCHG 425 RCR C++ E C + C + RG H E+ CV+ P Q CH Sbjct: 745 RCRRCHKGCETCSSRAATQC--LSCRRGFYHHQEMNTCVTLCPAGFYADESQKNCLKCHP 802 Query: 424 LQAKRFCYPDQPQHCKH-----VGNCQVDC 350 K P++ CK G+C DC Sbjct: 803 SCKKCVDEPEKCTVCKEGFSLARGSCIPDC 832
>ZDH13_PONPY (Q5NVB9) Probable palmitoyltransferase ZDHHC13 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 13) (DHHC-13) Length = 622 Score = 30.0 bits (66), Expect = 5.4 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Frame = -1 Query: 481 CVSCAPPRPLQPLHTH-CHGLQAKRFCYPDQPQHCKHVGNCQVDCGHMH 338 C SC +PL+ LH H C+ C QHC G C + G+ H Sbjct: 428 CTSCLIRKPLRSLHCHVCNS------CVARYDQHCLWTGRC-IGFGNHH 469
>ZDH13_MACFA (Q4R690) Probable palmitoyltransferase ZDHHC13 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 13) (DHHC-13) Length = 622 Score = 30.0 bits (66), Expect = 5.4 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Frame = -1 Query: 481 CVSCAPPRPLQPLHTH-CHGLQAKRFCYPDQPQHCKHVGNCQVDCGHMH 338 C SC +PL+ LH H C+ C QHC G C + G+ H Sbjct: 428 CTSCLIRKPLRSLHCHVCNS------CVARYDQHCLWTGRC-IGFGNHH 469
>ADA17_RAT (Q9Z1K9) ADAM 17 precursor (EC 3.4.24.86) (A disintegrin and| metalloproteinase domain 17) (TNF-alpha-converting enzyme) (TNF-alpha convertase) (CD156b antigen) Length = 827 Score = 29.3 bits (64), Expect = 9.3 Identities = 30/109 (27%), Positives = 43/109 (39%), Gaps = 5/109 (4%) Frame = -1 Query: 580 CRACY--RAQEQCQQARSLDCPGFTIWRGHDEVGLCVSCAPPRPLQPLHTHCHGLQAKRF 407 C+ C AQ++CQ+A + C G + G+ C PP + T C L Sbjct: 522 CKNCQFETAQKKCQEAINATCKGVSYCTGNSS-----ECPPPGDAED-DTVCLDL----- 570 Query: 406 CYPDQPQHCKHVGNCQVDCGHMHEV*RGQVCAC---ERSCQATDEDLSG 269 CK G C C E+ + CAC + SC+ +LSG Sbjct: 571 ------GKCK-AGKCIPFCKREQEL---ESCACADTDNSCKVCCRNLSG 609
>ADA17_MOUSE (Q9Z0F8) ADAM 17 precursor (EC 3.4.24.86) (A disintegrin and| metalloproteinase domain 17) (TNF-alpha-converting enzyme) (TNF-alpha convertase) (CD156b antigen) Length = 827 Score = 29.3 bits (64), Expect = 9.3 Identities = 30/109 (27%), Positives = 43/109 (39%), Gaps = 5/109 (4%) Frame = -1 Query: 580 CRACY--RAQEQCQQARSLDCPGFTIWRGHDEVGLCVSCAPPRPLQPLHTHCHGLQAKRF 407 C+ C AQ++CQ+A + C G + G+ C PP + T C L Sbjct: 522 CKNCQFETAQKKCQEAINATCKGVSYCTGNSS-----ECPPPGDAED-DTVCLDL----- 570 Query: 406 CYPDQPQHCKHVGNCQVDCGHMHEV*RGQVCAC---ERSCQATDEDLSG 269 CK G C C E+ + CAC + SC+ +LSG Sbjct: 571 ------GKCK-AGKCIPFCKREQEL---ESCACVDTDNSCKVCCRNLSG 609
>ENGC_ERWCT (Q6D036) Probable GTPase engC (EC 3.6.1.-)| Length = 349 Score = 29.3 bits (64), Expect = 9.3 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Frame = +1 Query: 316 ILALFKLHAYVHNRLDNSPHVCSVEVDL-----GSKISWLVAHDSEYGVVEVVAGVHTRH 480 I++ F +HA V D C++ + G ++ W H+S G+ +V VH RH Sbjct: 44 IISRFGMHADVE-ATDGVVRRCNIRRTISSLVTGDRVVWRPGHESLAGISGIVEAVHPRH 102
>ZDH13_HUMAN (Q8IUH4) Probable palmitoyltransferase ZDHHC13 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 13) (DHHC-13) (Huntingtin-interacting protein 14-related protein) (HIP14-related protein) (Huntingtin-interacting protein HIP3RP) (Putativ Length = 622 Score = 29.3 bits (64), Expect = 9.3 Identities = 16/48 (33%), Positives = 20/48 (41%) Frame = -1 Query: 481 CVSCAPPRPLQPLHTHCHGLQAKRFCYPDQPQHCKHVGNCQVDCGHMH 338 C SC +PL+ LH H C QHC G C + G+ H Sbjct: 428 CTSCLIRKPLRSLHCH-----VCNCCVARYDQHCLWTGRC-IGFGNHH 469
>JAK2_RAT (Q62689) Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase| 2) (JAK-2) Length = 1132 Score = 29.3 bits (64), Expect = 9.3 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = -1 Query: 484 LCVSCAPPRPLQPLHTHCHG 425 LC APP L+ +H++CHG Sbjct: 383 LCKEVAPPAVLENIHSNCHG 402
>ADA17_HUMAN (P78536) ADAM 17 precursor (EC 3.4.24.86) (A disintegrin and| metalloproteinase domain 17) (TNF-alpha-converting enzyme) (TNF-alpha convertase) (Snake venom-like protease) (CD156b antigen) Length = 824 Score = 29.3 bits (64), Expect = 9.3 Identities = 30/109 (27%), Positives = 43/109 (39%), Gaps = 5/109 (4%) Frame = -1 Query: 580 CRACY--RAQEQCQQARSLDCPGFTIWRGHDEVGLCVSCAPPRPLQPLHTHCHGLQAKRF 407 C+ C AQ++CQ+A + C G + G+ C PP + T C L Sbjct: 522 CKNCQFETAQKKCQEAINATCKGVSYCTGNSS-----ECPPPGNAED-DTVCLDL----- 570 Query: 406 CYPDQPQHCKHVGNCQVDCGHMHEV*RGQVCAC---ERSCQATDEDLSG 269 CK G C C ++ + CAC + SC+ DLSG Sbjct: 571 ------GKCKD-GKCIPFCEREQQL---ESCACNETDNSCKVCCRDLSG 609
>K0195_HUMAN (Q12767) Protein KIAA0195 (Transmembrane protein 94)| Length = 1356 Score = 29.3 bits (64), Expect = 9.3 Identities = 23/98 (23%), Positives = 40/98 (40%) Frame = +1 Query: 217 LLWKWLFNIIVLKRIIRNLIDPHLWLGRIFHKHILALFKLHAYVHNRLDNSPHVCSVEVD 396 L W +++L ++++ +D LW R H VH L++ P Sbjct: 1267 LWWAVTVPVVLLGQVVQTAVDLQLWTHRDSH------------VHFGLEDVP-------- 1306 Query: 397 LGSKISWLVAHDSEYGVVEVVAGVHTRHITQLHHVRAR 510 ++WL+ G + +V V T I +LH +R R Sbjct: 1307 ---LLTWLL------GCLSLVLVVVTNEIVKLHEIRVR 1335
>JAK2_MOUSE (Q62120) Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase| 2) (JAK-2) Length = 1129 Score = 29.3 bits (64), Expect = 9.3 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = -1 Query: 484 LCVSCAPPRPLQPLHTHCHG 425 LC APP L+ +H++CHG Sbjct: 383 LCKEVAPPAVLENIHSNCHG 402 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,926,943 Number of Sequences: 219361 Number of extensions: 1571786 Number of successful extensions: 5024 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 4862 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5016 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
