ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags8d11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467591.1| Oryza sativa (japonica cultivar-group), mRNA Length = 726 Score = 462 bits (233), Expect = e-127 Identities = 395/449 (87%) Strand = Plus / Minus Query: 84 aacatagaagatgtaacctcagcgacttcagttacaacctgcttgtattccgattccagt 143 ||||| |||||||||||||| || ||||||| |||||| || | ||| || || | |||| Sbjct: 516 aacattgaagatgtaacctctgcaacttcagctacaacatggtcgtagtctgacttcagt 457 Query: 144 ttctccttcacctcttcagtgatctcccccttggctggcttggtcatcaccaacacgcag 203 |||||||||||||||||| |||||||||||||||| ||||||||||| |||| ||||| Sbjct: 456 ttctccttcacctcttcattgatctcccccttggcaggcttggtcataaccaggacgcaa 397 Query: 204 caggtgggcctcttggtagtacccgcggtcgcaagctcctcttttgatgtcacatatatg 263 ||||| |||||||| ||||| || || || ||||| ||||||||||||| |||||||||| Sbjct: 396 caggtaggcctcttagtagtcccggcagtagcaagatcctcttttgatggcacatatatg 337 Query: 264 tatgggacattggcttcctcacaaagtatgggaagatgtgtaatcacatcgataggagag 323 || || | ||| ||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 336 taaggaatattagcttcctcacaaagtattggaacatgtgtaatcacatcgataggagaa 277 Query: 324 atgtttccagcaattacacacaaccctttgctcccacggcggatgctcttgaccacctcc 383 || || |||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 276 atattcccagcaattacacacaaccctttgttcccacgacggatgctcttgaccacctcc 217 Query: 384 ttgaccccgcgcttcaggcacttggcctccgaggctcggcgaacgagcttgagggttttc 443 ||||| || ||||||||||||||||||||||| ||||| || ||||||||||||||| | Sbjct: 216 ttgactccccgcttcaggcacttggcctccgatgctcgccggacgagcttgagggttcgc 157 Query: 444 ttggagagcttcttgccggcgagcggcttggcgatgggcgccagcgccaccggggtcttc 503 ||| ||||||||||||||||||| ||||| ||||||||||| |||||| |||| |||| Sbjct: 156 ttgcagagcttcttgccggcgagaggcttcgcgatgggcgcgagcgccgttggggccttc 97 Query: 504 ttcttctccgtctccgtgtcgctccccat 532 ||||||||| |||||||| ||||||||| Sbjct: 96 ttcttctccacctccgtgttgctccccat 68
>dbj|AK063054.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-F02, full insert sequence Length = 726 Score = 462 bits (233), Expect = e-127 Identities = 395/449 (87%) Strand = Plus / Minus Query: 84 aacatagaagatgtaacctcagcgacttcagttacaacctgcttgtattccgattccagt 143 ||||| |||||||||||||| || ||||||| |||||| || | ||| || || | |||| Sbjct: 516 aacattgaagatgtaacctctgcaacttcagctacaacatggtcgtagtctgacttcagt 457 Query: 144 ttctccttcacctcttcagtgatctcccccttggctggcttggtcatcaccaacacgcag 203 |||||||||||||||||| |||||||||||||||| ||||||||||| |||| ||||| Sbjct: 456 ttctccttcacctcttcattgatctcccccttggcaggcttggtcataaccaggacgcaa 397 Query: 204 caggtgggcctcttggtagtacccgcggtcgcaagctcctcttttgatgtcacatatatg 263 ||||| |||||||| ||||| || || || ||||| ||||||||||||| |||||||||| Sbjct: 396 caggtaggcctcttagtagtcccggcagtagcaagatcctcttttgatggcacatatatg 337 Query: 264 tatgggacattggcttcctcacaaagtatgggaagatgtgtaatcacatcgataggagag 323 || || | ||| ||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 336 taaggaatattagcttcctcacaaagtattggaacatgtgtaatcacatcgataggagaa 277 Query: 324 atgtttccagcaattacacacaaccctttgctcccacggcggatgctcttgaccacctcc 383 || || |||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 276 atattcccagcaattacacacaaccctttgttcccacgacggatgctcttgaccacctcc 217 Query: 384 ttgaccccgcgcttcaggcacttggcctccgaggctcggcgaacgagcttgagggttttc 443 ||||| || ||||||||||||||||||||||| ||||| || ||||||||||||||| | Sbjct: 216 ttgactccccgcttcaggcacttggcctccgatgctcgccggacgagcttgagggttcgc 157 Query: 444 ttggagagcttcttgccggcgagcggcttggcgatgggcgccagcgccaccggggtcttc 503 ||| ||||||||||||||||||| ||||| ||||||||||| |||||| |||| |||| Sbjct: 156 ttgcagagcttcttgccggcgagaggcttcgcgatgggcgcgagcgccgttggggccttc 97 Query: 504 ttcttctccgtctccgtgtcgctccccat 532 ||||||||| |||||||| ||||||||| Sbjct: 96 ttcttctccacctccgtgttgctccccat 68
>gb|AY104029.1| Zea mays PCO076082 mRNA sequence Length = 1018 Score = 359 bits (181), Expect = 7e-96 Identities = 376/441 (85%) Strand = Plus / Minus Query: 92 agatgtaacctcagcgacttcagttacaacctgcttgtattccgattccagtttctcctt 151 ||||||| ||||||| ||||| |||||||| || | || || || | |||||| ||||| Sbjct: 501 agatgtagcctcagcaacttccgttacaacttggtcatagtctgacttcagtttatcctt 442 Query: 152 cacctcttcagtgatctcccccttggctggcttggtcatcaccaacacgcagcaggtggg 211 |||||| ||| ||| |||||||||| ||| ||||||| |||| ||||| || || || Sbjct: 441 cacctcgtcactgagctcccccttgtttggtttggtcagaaccaggacgcaacaagttgg 382 Query: 212 cctcttggtagtacccgcggtcgcaagctcctcttttgatgtcacatatatgtatgggac 271 |||||| || || |||||||||||||| ||||||||||||| ||||||||||| || || Sbjct: 381 cctcttagtggttcccgcggtcgcaagatcctcttttgatggaacatatatgtaaggaac 322 Query: 272 attggcttcctcacaaagtatgggaagatgtgtaatcacatcgataggagagatgtttcc 331 ||| | ||||||||| ||||| |||| |||||||||||||| |||||||| || ||||| Sbjct: 321 attagattcctcacatagtattggaacgtgtgtaatcacatcaataggagaaatatttcc 262 Query: 332 agcaattacacacaaccctttgctcccacggcggatgctcttgaccacctccttgacccc 391 |||||| ||||||||||||||| |||| ||||| ||||||||||| ||||| ||||| || Sbjct: 261 agcaatcacacacaaccctttgttcccgcggcgaatgctcttgactacctctttgactcc 202 Query: 392 gcgcttcaggcacttggcctccgaggctcggcgaacgagcttgagggttttcttggagag 451 |||||| |||||||||||||| |||||||| || |||||||||||||| |||| |||| Sbjct: 201 gcgcttgaggcacttggcctcagaggctcgtcgcacgagcttgagggtccgcttgcagag 142 Query: 452 cttcttgccggcgagcggcttggcgatgggcgccagcgccaccggggtcttcttcttctc 511 |||||| || ||||| ||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 141 cttctttccagcgagaggcttcgcgatgggcatcagcgccaccggggtcttcttcttctc 82 Query: 512 cgtctccgtgtcgctccccat 532 ||||||| |||||||||||| Sbjct: 81 cgtctccaggtcgctccccat 61
>gb|BT017981.1| Zea mays clone EL01N0525C06.c mRNA sequence Length = 1073 Score = 351 bits (177), Expect = 2e-93 Identities = 375/441 (85%) Strand = Plus / Minus Query: 92 agatgtaacctcagcgacttcagttacaacctgcttgtattccgattccagtttctcctt 151 ||||||| ||||||| ||||| |||||||| || | || || || | |||||| ||||| Sbjct: 507 agatgtagcctcagcaacttccgttacaacttggtcatagtctgacttcagtttatcctt 448 Query: 152 cacctcttcagtgatctcccccttggctggcttggtcatcaccaacacgcagcaggtggg 211 |||||| ||| ||| |||||||||| ||| ||||||| |||| ||||| || || || Sbjct: 447 cacctcgtcactgagctcccccttgtttggtttggtcagaaccaggacgcaacaagttgg 388 Query: 212 cctcttggtagtacccgcggtcgcaagctcctcttttgatgtcacatatatgtatgggac 271 |||||| || || || ||||||||||| ||||||||||||| ||||||||||| || || Sbjct: 387 cctcttagtggttcctgcggtcgcaagatcctcttttgatggaacatatatgtaaggaac 328 Query: 272 attggcttcctcacaaagtatgggaagatgtgtaatcacatcgataggagagatgtttcc 331 ||| | ||||||||| ||||| |||| |||||||||||||| |||||||| || ||||| Sbjct: 327 attagattcctcacatagtattggaacgtgtgtaatcacatcaataggagaaatatttcc 268 Query: 332 agcaattacacacaaccctttgctcccacggcggatgctcttgaccacctccttgacccc 391 |||||| ||||||||||||||| |||| ||||| ||||||||||| ||||| ||||| || Sbjct: 267 agcaatcacacacaaccctttgttcccgcggcgaatgctcttgactacctctttgactcc 208 Query: 392 gcgcttcaggcacttggcctccgaggctcggcgaacgagcttgagggttttcttggagag 451 |||||| |||||||||||||| |||||||| || |||||||||||||| |||| |||| Sbjct: 207 gcgcttgaggcacttggcctcagaggctcgtcgcacgagcttgagggtccgcttgcagag 148 Query: 452 cttcttgccggcgagcggcttggcgatgggcgccagcgccaccggggtcttcttcttctc 511 |||||| || ||||| ||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 147 cttctttccagcgaggggcttcgcgatgggcatcagcgccaccggggtcttcttcttctc 88 Query: 512 cgtctccgtgtcgctccccat 532 ||||||| |||||||||||| Sbjct: 87 cgtctccaggtcgctccccat 67
>ref|NM_185783.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 453 Score = 289 bits (146), Expect = 5e-75 Identities = 308/362 (85%) Strand = Plus / Minus Query: 171 cccttggctggcttggtcatcaccaacacgcagcaggtgggcctcttggtagtacccgcg 230 ||||||||||||||||||| ||||| || || ||||| |||||||||||||| || || Sbjct: 362 cccttggctggcttggtcagaaccaatacacaacaggtaggcctcttggtagtcccagct 303 Query: 231 gtcgcaagctcctcttttgatgtcacatatatgtatgggacattggcttcctcacaaagt 290 || || || |||||||| || | ||||||| || || | |||||||| || ||||| Sbjct: 302 gttgcgagatcctctttcgacggaacatatacataaggaatgttggcttcttcgcaaagg 243 Query: 291 atgggaagatgtgtaatcacatcgataggagagatgtttccagcaattacacacaaccct 350 ||||||| |||||| |||||||| || ||||| ||||| |||||||| | ||||| ||| Sbjct: 242 atgggaacatgtgttatcacatcaatgggagaaatgttgccagcaatgatgcacaatcct 183 Query: 351 ttgctcccacggcggatgctcttgaccacctccttgaccccgcgcttcaggcacttggcc 410 || ||| ||||||||||||||||| ||||||||||| || ||||||| ||| |||||| Sbjct: 182 ttctgcccgcggcggatgctcttgacgacctccttgactcctcgcttcaagcatttggcc 123 Query: 411 tccgaggctcggcgaacgagcttgagggttttcttggagagcttcttgccggcgagcggc 470 || || |||||||| ||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 122 tcagacgctcggcggacgagcttgagggttcgcttgcagagcttcttgccggcgagcggc 63 Query: 471 ttggcgatgggcgccagcgccaccggggtcttcttcttctccgtctccgtgtcgctcccc 530 || |||||||||||||||||||| || |||||||||||||||| |||||||||||||||| Sbjct: 62 ttcgcgatgggcgccagcgccacgggcgtcttcttcttctccgcctccgtgtcgctcccc 3 Query: 531 at 532 || Sbjct: 2 at 1
>dbj|AK073155.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033011J22, full insert sequence Length = 784 Score = 289 bits (146), Expect = 5e-75 Identities = 308/362 (85%) Strand = Plus / Minus Query: 171 cccttggctggcttggtcatcaccaacacgcagcaggtgggcctcttggtagtacccgcg 230 ||||||||||||||||||| ||||| || || ||||| |||||||||||||| || || Sbjct: 463 cccttggctggcttggtcagaaccaatacacaacaggtaggcctcttggtagtcccagct 404 Query: 231 gtcgcaagctcctcttttgatgtcacatatatgtatgggacattggcttcctcacaaagt 290 || || || |||||||| || | ||||||| || || | |||||||| || ||||| Sbjct: 403 gttgcgagatcctctttcgacggaacatatacataaggaatgttggcttcttcgcaaagg 344 Query: 291 atgggaagatgtgtaatcacatcgataggagagatgtttccagcaattacacacaaccct 350 ||||||| |||||| |||||||| || ||||| ||||| |||||||| | ||||| ||| Sbjct: 343 atgggaacatgtgttatcacatcaatgggagaaatgttgccagcaatgatgcacaatcct 284 Query: 351 ttgctcccacggcggatgctcttgaccacctccttgaccccgcgcttcaggcacttggcc 410 || ||| ||||||||||||||||| ||||||||||| || ||||||| ||| |||||| Sbjct: 283 ttctgcccgcggcggatgctcttgacgacctccttgactcctcgcttcaagcatttggcc 224 Query: 411 tccgaggctcggcgaacgagcttgagggttttcttggagagcttcttgccggcgagcggc 470 || || |||||||| ||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 223 tcagacgctcggcggacgagcttgagggttcgcttgcagagcttcttgccggcgagcggc 164 Query: 471 ttggcgatgggcgccagcgccaccggggtcttcttcttctccgtctccgtgtcgctcccc 530 || |||||||||||||||||||| || |||||||||||||||| |||||||||||||||| Sbjct: 163 ttcgcgatgggcgccagcgccacgggcgtcttcttcttctccgcctccgtgtcgctcccc 104 Query: 531 at 532 || Sbjct: 103 at 102
>dbj|AK058973.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-D03, full insert sequence Length = 1175 Score = 289 bits (146), Expect = 5e-75 Identities = 308/362 (85%) Strand = Plus / Minus Query: 171 cccttggctggcttggtcatcaccaacacgcagcaggtgggcctcttggtagtacccgcg 230 ||||||||||||||||||| ||||| || || ||||| |||||||||||||| || || Sbjct: 846 cccttggctggcttggtcagaaccaatacacaacaggtaggcctcttggtagtcccagct 787 Query: 231 gtcgcaagctcctcttttgatgtcacatatatgtatgggacattggcttcctcacaaagt 290 || || || |||||||| || | ||||||| || || | |||||||| || ||||| Sbjct: 786 gttgcgagatcctctttcgacggaacatatacataaggaatgttggcttcttcgcaaagg 727 Query: 291 atgggaagatgtgtaatcacatcgataggagagatgtttccagcaattacacacaaccct 350 ||||||| |||||| |||||||| || ||||| ||||| |||||||| | ||||| ||| Sbjct: 726 atgggaacatgtgttatcacatcaatgggagaaatgttgccagcaatgatgcacaatcct 667 Query: 351 ttgctcccacggcggatgctcttgaccacctccttgaccccgcgcttcaggcacttggcc 410 || ||| ||||||||||||||||| ||||||||||| || ||||||| ||| |||||| Sbjct: 666 ttctgcccgcggcggatgctcttgacgacctccttgactcctcgcttcaagcatttggcc 607 Query: 411 tccgaggctcggcgaacgagcttgagggttttcttggagagcttcttgccggcgagcggc 470 || || |||||||| ||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 606 tcagacgctcggcggacgagcttgagggttcgcttgcagagcttcttgccggcgagcggc 547 Query: 471 ttggcgatgggcgccagcgccaccggggtcttcttcttctccgtctccgtgtcgctcccc 530 || |||||||||||||||||||| || |||||||||||||||| |||||||||||||||| Sbjct: 546 ttcgcgatgggcgccagcgccacgggcgtcttcttcttctccgcctccgtgtcgctcccc 487 Query: 531 at 532 || Sbjct: 486 at 485
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 165 bits (83), Expect = 2e-37 Identities = 107/115 (93%) Strand = Plus / Minus Query: 418 ctcggcgaacgagcttgagggttttcttggagagcttcttgccggcgagcggcttggcga 477 ||||||| ||||||||||||||| |||| ||||||||||||||||||||||||| |||| Sbjct: 9294193 ctcggcggacgagcttgagggttcgcttgcagagcttcttgccggcgagcggcttcgcga 9294134 Query: 478 tgggcgccagcgccaccggggtcttcttcttctccgtctccgtgtcgctccccat 532 |||||||||||||||| || |||||||||||||||| |||||||||||||||||| Sbjct: 9294133 tgggcgccagcgccacgggcgtcttcttcttctccgcctccgtgtcgctccccat 9294079 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 360 cggcggatgctcttgaccacctccttgaccccgcgcttcaggcacttggcctc 412 ||||||||||||||||| ||||||||||| || ||||||| ||| |||||||| Sbjct: 9294357 cggcggatgctcttgacgacctccttgactcctcgcttcaagcatttggcctc 9294305 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 171 cccttggctggcttggtcatcaccaacacgcagcaggtgggcctcttggtagt 223 ||||||||||||||||||| ||||| || || ||||| |||||||||||||| Sbjct: 9295735 cccttggctggcttggtcagaaccaatacacaacaggtaggcctcttggtagt 9295683
>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0676F10 Length = 142510 Score = 165 bits (83), Expect = 2e-37 Identities = 107/115 (93%) Strand = Plus / Minus Query: 418 ctcggcgaacgagcttgagggttttcttggagagcttcttgccggcgagcggcttggcga 477 ||||||| ||||||||||||||| |||| ||||||||||||||||||||||||| |||| Sbjct: 61534 ctcggcggacgagcttgagggttcgcttgcagagcttcttgccggcgagcggcttcgcga 61475 Query: 478 tgggcgccagcgccaccggggtcttcttcttctccgtctccgtgtcgctccccat 532 |||||||||||||||| || |||||||||||||||| |||||||||||||||||| Sbjct: 61474 tgggcgccagcgccacgggcgtcttcttcttctccgcctccgtgtcgctccccat 61420 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 360 cggcggatgctcttgaccacctccttgaccccgcgcttcaggcacttggcctc 412 ||||||||||||||||| ||||||||||| || ||||||| ||| |||||||| Sbjct: 61698 cggcggatgctcttgacgacctccttgactcctcgcttcaagcatttggcctc 61646 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 171 cccttggctggcttggtcatcaccaacacgcagcaggtgggcctcttggtagt 223 ||||||||||||||||||| ||||| || || ||||| |||||||||||||| Sbjct: 63076 cccttggctggcttggtcagaaccaatacacaacaggtaggcctcttggtagt 63024
>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0038C05 Length = 152941 Score = 165 bits (83), Expect = 2e-37 Identities = 107/115 (93%) Strand = Plus / Minus Query: 418 ctcggcgaacgagcttgagggttttcttggagagcttcttgccggcgagcggcttggcga 477 ||||||| ||||||||||||||| |||| ||||||||||||||||||||||||| |||| Sbjct: 22603 ctcggcggacgagcttgagggttcgcttgcagagcttcttgccggcgagcggcttcgcga 22544 Query: 478 tgggcgccagcgccaccggggtcttcttcttctccgtctccgtgtcgctccccat 532 |||||||||||||||| || |||||||||||||||| |||||||||||||||||| Sbjct: 22543 tgggcgccagcgccacgggcgtcttcttcttctccgcctccgtgtcgctccccat 22489 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 360 cggcggatgctcttgaccacctccttgaccccgcgcttcaggcacttggcctc 412 ||||||||||||||||| ||||||||||| || ||||||| ||| |||||||| Sbjct: 22767 cggcggatgctcttgacgacctccttgactcctcgcttcaagcatttggcctc 22715 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 171 cccttggctggcttggtcatcaccaacacgcagcaggtgggcctcttggtagt 223 ||||||||||||||||||| ||||| || || ||||| |||||||||||||| Sbjct: 24145 cccttggctggcttggtcagaaccaatacacaacaggtaggcctcttggtagt 24093
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 135 bits (68), Expect = 2e-28 Identities = 98/108 (90%) Strand = Plus / Plus Query: 241 cctcttttgatgtcacatatatgtatgggacattggcttcctcacaaagtatgggaagat 300 |||||||||||| |||||||||||| || | ||| ||||||||||||||||| |||| || Sbjct: 30343023 cctcttttgatggcacatatatgtaaggaatattagcttcctcacaaagtattggaacat 30343082 Query: 301 gtgtaatcacatcgataggagagatgtttccagcaattacacacaacc 348 |||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 30343083 gtgtaatcacatcgataggagaaatattcccagcaattacacacaacc 30343130 Score = 127 bits (64), Expect = 4e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 84 aacatagaagatgtaacctcagcgacttcagttacaacctgcttgtattccgattccagt 143 ||||| |||||||||||||| || ||||||| |||||| || | ||| || || | |||| Sbjct: 30342109 aacattgaagatgtaacctctgcaacttcagctacaacatggtcgtagtctgacttcagt 30342168 Query: 144 ttctccttcacctcttcagtgatctcccccttggctggcttggtcatcaccaacacgcag 203 |||||||||||||||||| |||||||||||||||| ||||||||||| |||| ||||| Sbjct: 30342169 ttctccttcacctcttcattgatctcccccttggcaggcttggtcataaccaggacgcaa 30342228 Query: 204 caggtgggcctcttggtagt 223 ||||| |||||||| ||||| Sbjct: 30342229 caggtaggcctcttagtagt 30342248 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 426 acgagcttgagggttttcttggagagcttcttgccggcgagcggcttggcgatgggcgcc 485 ||||||||||||||| |||| ||||||||||||||||||| ||||| ||||||||||| Sbjct: 30343986 acgagcttgagggttcgcttgcagagcttcttgccggcgagaggcttcgcgatgggcgcg 30344045 Query: 486 agcgccaccggggtcttcttcttctccgtctccgtgtcgctccccat 532 |||||| |||| ||||||||||||| |||||||| ||||||||| Sbjct: 30344046 agcgccgttggggccttcttcttctccacctccgtgttgctccccat 30344092 Score = 109 bits (55), Expect = 1e-20 Identities = 67/71 (94%) Strand = Plus / Plus Query: 345 aaccctttgctcccacggcggatgctcttgaccacctccttgaccccgcgcttcaggcac 404 ||||||||| ||||||| |||||||||||||||||||||||||| || |||||||||||| Sbjct: 30343785 aaccctttgttcccacgacggatgctcttgaccacctccttgactccccgcttcaggcac 30343844 Query: 405 ttggcctccga 415 ||||||||||| Sbjct: 30343845 ttggcctccga 30343855 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 499 tcttcttcttctccgtctccg 519 ||||||||||||||||||||| Sbjct: 34044881 tcttcttcttctccgtctccg 34044901 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 cggcgagcggcttggcgatg 479 |||||||||||||||||||| Sbjct: 15798178 cggcgagcggcttggcgatg 15798159
>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0072H09 Length = 160541 Score = 135 bits (68), Expect = 2e-28 Identities = 98/108 (90%) Strand = Plus / Plus Query: 241 cctcttttgatgtcacatatatgtatgggacattggcttcctcacaaagtatgggaagat 300 |||||||||||| |||||||||||| || | ||| ||||||||||||||||| |||| || Sbjct: 23883 cctcttttgatggcacatatatgtaaggaatattagcttcctcacaaagtattggaacat 23942 Query: 301 gtgtaatcacatcgataggagagatgtttccagcaattacacacaacc 348 |||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 23943 gtgtaatcacatcgataggagaaatattcccagcaattacacacaacc 23990 Score = 127 bits (64), Expect = 4e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 84 aacatagaagatgtaacctcagcgacttcagttacaacctgcttgtattccgattccagt 143 ||||| |||||||||||||| || ||||||| |||||| || | ||| || || | |||| Sbjct: 22969 aacattgaagatgtaacctctgcaacttcagctacaacatggtcgtagtctgacttcagt 23028 Query: 144 ttctccttcacctcttcagtgatctcccccttggctggcttggtcatcaccaacacgcag 203 |||||||||||||||||| |||||||||||||||| ||||||||||| |||| ||||| Sbjct: 23029 ttctccttcacctcttcattgatctcccccttggcaggcttggtcataaccaggacgcaa 23088 Query: 204 caggtgggcctcttggtagt 223 ||||| |||||||| ||||| Sbjct: 23089 caggtaggcctcttagtagt 23108 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Plus Query: 426 acgagcttgagggttttcttggagagcttcttgccggcgagcggcttggcgatgggcgcc 485 ||||||||||||||| |||| ||||||||||||||||||| ||||| ||||||||||| Sbjct: 24846 acgagcttgagggttcgcttgcagagcttcttgccggcgagaggcttcgcgatgggcgcg 24905 Query: 486 agcgccaccggggtcttcttcttctccgtctccgtgtcgctccccat 532 |||||| |||| ||||||||||||| |||||||| ||||||||| Sbjct: 24906 agcgccgttggggccttcttcttctccacctccgtgttgctccccat 24952 Score = 109 bits (55), Expect = 1e-20 Identities = 67/71 (94%) Strand = Plus / Plus Query: 345 aaccctttgctcccacggcggatgctcttgaccacctccttgaccccgcgcttcaggcac 404 ||||||||| ||||||| |||||||||||||||||||||||||| || |||||||||||| Sbjct: 24645 aaccctttgttcccacgacggatgctcttgaccacctccttgactccccgcttcaggcac 24704 Query: 405 ttggcctccga 415 ||||||||||| Sbjct: 24705 ttggcctccga 24715
>gb|DQ427235.1| Sorghum propinquum locus C0235 genomic sequence Length = 688 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 346 accctttgctcccacggcggatgctcttgaccacctccttgaccccgcgcttcaggcact 405 |||||||| |||| ||||| ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct: 246 accctttgttcccgcggcgaatgctcttgactacctctttgactccgcgcttgaggcact 187 Query: 406 tggcctccgaggct 419 ||||||| |||||| Sbjct: 186 tggcctcagaggct 173 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 426 acgagcttgagggttttcttggagagcttcttgccggcgagcggcttggcgatgg 480 |||||||||||||| |||| |||||||||| || ||||| ||||| ||||||| Sbjct: 55 acgagcttgagggtccgcttgcagagcttctttccagcgaggggcttcgcgatgg 1
>gb|DQ427234.1| Sorghum bicolor voucher PI585454 locus C0235 genomic sequence Length = 682 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 346 accctttgctcccacggcggatgctcttgaccacctccttgaccccgcgcttcaggcact 405 |||||||| |||| ||||| ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct: 234 accctttgttcccgcggcgaatgctcttgactacctctttgactccgcgcttgaggcact 175 Query: 406 tggcctccgaggct 419 ||||||| |||||| Sbjct: 174 tggcctcagaggct 161 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 426 acgagcttgagggttttcttggagagcttcttgccggcgagcggcttggcgatgg 480 |||||||||||||| |||| |||||||||| || ||||| ||||| ||||||| Sbjct: 55 acgagcttgagggtccgcttgcagagcttctttccagcgaggggcttcgcgatgg 1
>gb|DQ427233.1| Sorghum bicolor voucher PI267539 locus C0235 genomic sequence Length = 682 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 346 accctttgctcccacggcggatgctcttgaccacctccttgaccccgcgcttcaggcact 405 |||||||| |||| ||||| ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct: 234 accctttgttcccgcggcgaatgctcttgactacctctttgactccgcgcttgaggcact 175 Query: 406 tggcctccgaggct 419 ||||||| |||||| Sbjct: 174 tggcctcagaggct 161 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 426 acgagcttgagggttttcttggagagcttcttgccggcgagcggcttggcgatgg 480 |||||||||||||| |||| |||||||||| || ||||| ||||| ||||||| Sbjct: 55 acgagcttgagggtccgcttgcagagcttctttccagcgaggggcttcgcgatgg 1
>gb|DQ427232.1| Sorghum bicolor voucher PI267408 locus C0235 genomic sequence Length = 682 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 346 accctttgctcccacggcggatgctcttgaccacctccttgaccccgcgcttcaggcact 405 |||||||| |||| ||||| ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct: 234 accctttgttcccgcggcgaatgctcttgactacctctttgactccgcgcttgaggcact 175 Query: 406 tggcctccgaggct 419 ||||||| |||||| Sbjct: 174 tggcctcagaggct 161 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 426 acgagcttgagggttttcttggagagcttcttgccggcgagcggcttggcgatgg 480 |||||||||||||| |||| |||||||||| || ||||| ||||| ||||||| Sbjct: 55 acgagcttgagggtccgcttgcagagcttctttccagcgaggggcttcgcgatgg 1
>gb|DQ427231.1| Sorghum bicolor voucher PI221607 locus C0235 genomic sequence Length = 682 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 346 accctttgctcccacggcggatgctcttgaccacctccttgaccccgcgcttcaggcact 405 |||||||| |||| ||||| ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct: 234 accctttgttcccgcggcgaatgctcttgactacctctttgactccgcgcttgaggcact 175 Query: 406 tggcctccgaggct 419 ||||||| |||||| Sbjct: 174 tggcctcagaggct 161 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 426 acgagcttgagggttttcttggagagcttcttgccggcgagcggcttggcgatgg 480 |||||||||||||| |||| |||||||||| || ||||| ||||| ||||||| Sbjct: 55 acgagcttgagggtccgcttgcagagcttctttccagcgaggggcttcgcgatgg 1
>gb|DQ427230.1| Sorghum bicolor voucher PI152702 locus C0235 genomic sequence Length = 682 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 346 accctttgctcccacggcggatgctcttgaccacctccttgaccccgcgcttcaggcact 405 |||||||| |||| ||||| ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct: 234 accctttgttcccgcggcgaatgctcttgactacctctttgactccgcgcttgaggcact 175 Query: 406 tggcctccgaggct 419 ||||||| |||||| Sbjct: 174 tggcctcagaggct 161 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 426 acgagcttgagggttttcttggagagcttcttgccggcgagcggcttggcgatgg 480 |||||||||||||| |||| |||||||||| || ||||| ||||| ||||||| Sbjct: 55 acgagcttgagggtccgcttgcagagcttctttccagcgaggggcttcgcgatgg 1
>gb|DQ427229.1| Sorghum bicolor voucher NSL92371 locus C0235 genomic sequence Length = 682 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 346 accctttgctcccacggcggatgctcttgaccacctccttgaccccgcgcttcaggcact 405 |||||||| |||| ||||| ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct: 234 accctttgttcccgcggcgaatgctcttgactacctctttgactccgcgcttgaggcact 175 Query: 406 tggcctccgaggct 419 ||||||| |||||| Sbjct: 174 tggcctcagaggct 161 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 426 acgagcttgagggttttcttggagagcttcttgccggcgagcggcttggcgatgg 480 |||||||||||||| |||| |||||||||| || ||||| ||||| ||||||| Sbjct: 55 acgagcttgagggtccgcttgcagagcttctttccagcgaggggcttcgcgatgg 1
>gb|DQ427228.1| Sorghum bicolor voucher NSL87902 locus C0235 genomic sequence Length = 682 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 346 accctttgctcccacggcggatgctcttgaccacctccttgaccccgcgcttcaggcact 405 |||||||| |||| ||||| ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct: 234 accctttgttcccgcggcgaatgctcttgactacctctttgactccgcgcttgaggcact 175 Query: 406 tggcctccgaggct 419 ||||||| |||||| Sbjct: 174 tggcctcagaggct 161 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 426 acgagcttgagggttttcttggagagcttcttgccggcgagcggcttggcgatgg 480 |||||||||||||| |||| |||||||||| || ||||| ||||| ||||||| Sbjct: 55 acgagcttgagggtccgcttgcagagcttctttccagcgaggggcttcgcgatgg 1
>gb|DQ427227.1| Sorghum bicolor voucher NSL87666 locus C0235 genomic sequence Length = 682 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 346 accctttgctcccacggcggatgctcttgaccacctccttgaccccgcgcttcaggcact 405 |||||||| |||| ||||| ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct: 234 accctttgttcccgcggcgaatgctcttgactacctctttgactccgcgcttgaggcact 175 Query: 406 tggcctccgaggct 419 ||||||| |||||| Sbjct: 174 tggcctcagaggct 161 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 426 acgagcttgagggttttcttggagagcttcttgccggcgagcggcttggcgatgg 480 |||||||||||||| |||| |||||||||| || ||||| ||||| ||||||| Sbjct: 55 acgagcttgagggtccgcttgcagagcttctttccagcgaggggcttcgcgatgg 1
>gb|DQ427226.1| Sorghum bicolor voucher NSL77217 locus C0235 genomic sequence Length = 682 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 346 accctttgctcccacggcggatgctcttgaccacctccttgaccccgcgcttcaggcact 405 |||||||| |||| ||||| ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct: 234 accctttgttcccgcggcgaatgctcttgactacctctttgactccgcgcttgaggcact 175 Query: 406 tggcctccgaggct 419 ||||||| |||||| Sbjct: 174 tggcctcagaggct 161 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 426 acgagcttgagggttttcttggagagcttcttgccggcgagcggcttggcgatgg 480 |||||||||||||| |||| |||||||||| || ||||| ||||| ||||||| Sbjct: 55 acgagcttgagggtccgcttgcagagcttctttccagcgaggggcttcgcgatgg 1
>gb|DQ427225.1| Sorghum bicolor voucher NSL77034 locus C0235 genomic sequence Length = 682 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 346 accctttgctcccacggcggatgctcttgaccacctccttgaccccgcgcttcaggcact 405 |||||||| |||| ||||| ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct: 234 accctttgttcccgcggcgaatgctcttgactacctctttgactccgcgcttgaggcact 175 Query: 406 tggcctccgaggct 419 ||||||| |||||| Sbjct: 174 tggcctcagaggct 161 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 426 acgagcttgagggttttcttggagagcttcttgccggcgagcggcttggcgatgg 480 |||||||||||||| |||| |||||||||| || ||||| ||||| ||||||| Sbjct: 55 acgagcttgagggtccgcttgcagagcttctttccagcgaggggcttcgcgatgg 1
>gb|DQ427224.1| Sorghum bicolor voucher NSL56174 locus C0235 genomic sequence Length = 682 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 346 accctttgctcccacggcggatgctcttgaccacctccttgaccccgcgcttcaggcact 405 |||||||| |||| ||||| ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct: 234 accctttgttcccgcggcgaatgctcttgactacctctttgactccgcgcttgaggcact 175 Query: 406 tggcctccgaggct 419 ||||||| |||||| Sbjct: 174 tggcctcagaggct 161 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 426 acgagcttgagggttttcttggagagcttcttgccggcgagcggcttggcgatgg 480 |||||||||||||| |||| |||||||||| || ||||| ||||| ||||||| Sbjct: 55 acgagcttgagggtccgcttgcagagcttctttccagcgaggggcttcgcgatgg 1
>gb|DQ427223.1| Sorghum bicolor voucher NSL56003 locus C0235 genomic sequence Length = 682 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 346 accctttgctcccacggcggatgctcttgaccacctccttgaccccgcgcttcaggcact 405 |||||||| |||| ||||| ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct: 234 accctttgttcccgcggcgaatgctcttgactacctctttgactccgcgcttgaggcact 175 Query: 406 tggcctccgaggct 419 ||||||| |||||| Sbjct: 174 tggcctcagaggct 161 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 426 acgagcttgagggttttcttggagagcttcttgccggcgagcggcttggcgatgg 480 |||||||||||||| |||| |||||||||| || ||||| ||||| ||||||| Sbjct: 55 acgagcttgagggtccgcttgcagagcttctttccagcgaggggcttcgcgatgg 1
>gb|DQ427222.1| Sorghum bicolor voucher NSL55243 locus C0235 genomic sequence Length = 682 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 346 accctttgctcccacggcggatgctcttgaccacctccttgaccccgcgcttcaggcact 405 |||||||| |||| ||||| ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct: 234 accctttgttcccgcggcgaatgctcttgactacctctttgactccgcgcttgaggcact 175 Query: 406 tggcctccgaggct 419 ||||||| |||||| Sbjct: 174 tggcctcagaggct 161 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 426 acgagcttgagggttttcttggagagcttcttgccggcgagcggcttggcgatgg 480 |||||||||||||| |||| |||||||||| || ||||| ||||| ||||||| Sbjct: 55 acgagcttgagggtccgcttgcagagcttctttccagcgaggggcttcgcgatgg 1
>gb|DQ427221.1| Sorghum bicolor voucher NSL51365 locus C0235 genomic sequence Length = 682 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 346 accctttgctcccacggcggatgctcttgaccacctccttgaccccgcgcttcaggcact 405 |||||||| |||| ||||| ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct: 234 accctttgttcccgcggcgaatgctcttgactacctctttgactccgcgcttgaggcact 175 Query: 406 tggcctccgaggct 419 ||||||| |||||| Sbjct: 174 tggcctcagaggct 161 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 426 acgagcttgagggttttcttggagagcttcttgccggcgagcggcttggcgatgg 480 |||||||||||||| |||| |||||||||| || ||||| ||||| ||||||| Sbjct: 55 acgagcttgagggtccgcttgcagagcttctttccagcgaggggcttcgcgatgg 1
>gb|DQ427220.1| Sorghum bicolor voucher NSL51030 locus C0235 genomic sequence Length = 682 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 346 accctttgctcccacggcggatgctcttgaccacctccttgaccccgcgcttcaggcact 405 |||||||| |||| ||||| ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct: 234 accctttgttcccgcggcgaatgctcttgactacctctttgactccgcgcttgaggcact 175 Query: 406 tggcctccgaggct 419 ||||||| |||||| Sbjct: 174 tggcctcagaggct 161 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 426 acgagcttgagggttttcttggagagcttcttgccggcgagcggcttggcgatgg 480 |||||||||||||| |||| |||||||||| || ||||| ||||| ||||||| Sbjct: 55 acgagcttgagggtccgcttgcagagcttctttccagcgaggggcttcgcgatgg 1
>gb|DQ427219.1| Sorghum bicolor voucher NSL50875 locus C0235 genomic sequence Length = 682 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 346 accctttgctcccacggcggatgctcttgaccacctccttgaccccgcgcttcaggcact 405 |||||||| |||| ||||| ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct: 234 accctttgttcccgcggcgaatgctcttgactacctctttgactccgcgcttgaggcact 175 Query: 406 tggcctccgaggct 419 ||||||| |||||| Sbjct: 174 tggcctcagaggct 161 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 426 acgagcttgagggttttcttggagagcttcttgccggcgagcggcttggcgatgg 480 |||||||||||||| |||| |||||||||| || ||||| ||||| ||||||| Sbjct: 55 acgagcttgagggtccgcttgcagagcttctttccagcgaggggcttcgcgatgg 1
>gb|DQ427218.1| Sorghum bicolor voucher BTx623 locus C0235 genomic sequence Length = 682 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 346 accctttgctcccacggcggatgctcttgaccacctccttgaccccgcgcttcaggcact 405 |||||||| |||| ||||| ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct: 234 accctttgttcccgcggcgaatgctcttgactacctctttgactccgcgcttgaggcact 175 Query: 406 tggcctccgaggct 419 ||||||| |||||| Sbjct: 174 tggcctcagaggct 161 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 426 acgagcttgagggttttcttggagagcttcttgccggcgagcggcttggcgatgg 480 |||||||||||||| |||| |||||||||| || ||||| ||||| ||||||| Sbjct: 55 acgagcttgagggtccgcttgcagagcttctttccagcgaggggcttcgcgatgg 1
>ref|NM_120901.2| Arabidopsis thaliana RNA binding / structural constituent of ribosome AT5G08180 mRNA, complete cds Length = 731 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 294 ggaagatgtgtaatcacatcgataggagagatgtttccagcaattacacacaacccttt 352 |||||||| ||||| ||||| ||||| || ||||||||||| |||||||| || ||||| Sbjct: 331 ggaagatgagtaataacatcaataggtgaaatgtttccagctattacacataatccttt 273
>gb|AY050477.1| Arabidopsis thaliana AT5g08180/T22D6_120 mRNA, complete cds Length = 471 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 294 ggaagatgtgtaatcacatcgataggagagatgtttccagcaattacacacaacccttt 352 |||||||| ||||| ||||| ||||| || ||||||||||| |||||||| || ||||| Sbjct: 257 ggaagatgagtaataacatcaataggtgaaatgtttccagctattacacataatccttt 199
>gb|AF378885.1|AF378885 Arabidopsis thaliana AT5g08180/T22D6_120 mRNA, complete cds Length = 703 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 294 ggaagatgtgtaatcacatcgataggagagatgtttccagcaattacacacaacccttt 352 |||||||| ||||| ||||| ||||| || ||||||||||| |||||||| || ||||| Sbjct: 331 ggaagatgagtaataacatcaataggtgaaatgtttccagctattacacataatccttt 273
>emb|AL357612.1|ATT22D6 Arabidopsis thaliana DNA chromosome 5, BAC clone T22D6 (ESSA project) Length = 89988 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 294 ggaagatgtgtaatcacatcgataggagagatgtttccagcaattacaca 343 |||||||| ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct: 58818 ggaagatgagtaataacatcaataggtgaaatgtttccagctattacaca 58867
>ref|XM_800434.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510647.20) partial mRNA Length = 2040 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 498 gtcttcttcttctccgtctccgt 520 ||||||||||||||||||||||| Sbjct: 1835 gtcttcttcttctccgtctccgt 1813
>ref|NM_104480.2| Arabidopsis thaliana unknown protein AT1G56020 mRNA, complete cds Length = 1267 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 498 gtcttcttcttctccgtctccg 519 |||||||||||||||||||||| Sbjct: 1156 gtcttcttcttctccgtctccg 1177
>gb|BT012266.1| Arabidopsis thaliana At1g56020 gene, complete cds Length = 1197 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 498 gtcttcttcttctccgtctccg 519 |||||||||||||||||||||| Sbjct: 1086 gtcttcttcttctccgtctccg 1107
>gb|BT011613.1| Arabidopsis thaliana At1g56020 mRNA, complete cds Length = 1343 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 498 gtcttcttcttctccgtctccg 519 |||||||||||||||||||||| Sbjct: 1117 gtcttcttcttctccgtctccg 1138
>gb|AC122265.4| Mus musculus chromosome 8 clone RP23-197I18, complete sequence Length = 191473 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 540 ctgctgctgctgtcgccgccgc 561 |||||||||||||||||||||| Sbjct: 49890 ctgctgctgctgtcgccgccgc 49911
>ref|XM_751507.1| Ustilago maydis 521 hypothetical protein (UM00453.1) partial mRNA Length = 2928 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccgcggca 565 |||||||||||| ||||||||||||| Sbjct: 883 ctgctgctgctgccgccgccgcggca 858
>gb|AC009894.2| Arabidopsis thaliana chromosome I BAC T6H22 genomic sequence, complete sequence Length = 96489 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 498 gtcttcttcttctccgtctccg 519 |||||||||||||||||||||| Sbjct: 76474 gtcttcttcttctccgtctccg 76453
>emb|AL596130.13| Mouse DNA sequence from clone RP23-209O5 on chromosome 11, complete sequence Length = 203000 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 499 tcttcttcttctccgtctccgt 520 |||||||||||||||||||||| Sbjct: 184629 tcttcttcttctccgtctccgt 184608
>emb|BX816468.1|CNS0AE9K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH4ZH05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1344 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 498 gtcttcttcttctccgtctccg 519 |||||||||||||||||||||| Sbjct: 1129 gtcttcttcttctccgtctccg 1150
>emb|BX813710.1|CNS0AC8G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB35ZE05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1349 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 498 gtcttcttcttctccgtctccg 519 |||||||||||||||||||||| Sbjct: 1160 gtcttcttcttctccgtctccg 1181
>emb|BX815838.1|CNS0ABXJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH11ZF05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1392 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 498 gtcttcttcttctccgtctccg 519 |||||||||||||||||||||| Sbjct: 1146 gtcttcttcttctccgtctccg 1167
>emb|BX815837.1|CNS0ABWO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH11ZE12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1375 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 498 gtcttcttcttctccgtctccg 519 |||||||||||||||||||||| Sbjct: 1156 gtcttcttcttctccgtctccg 1177
>emb|BX814099.1|CNS0AC6Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZC09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1378 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 498 gtcttcttcttctccgtctccg 519 |||||||||||||||||||||| Sbjct: 1146 gtcttcttcttctccgtctccg 1167
>emb|BX816955.1|CNS0ABQ2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH78ZE10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1391 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 498 gtcttcttcttctccgtctccg 519 |||||||||||||||||||||| Sbjct: 1153 gtcttcttcttctccgtctccg 1174
>gb|AC002304.3|AC002304 Genomic sequence for Arabidopsis thaliana BAC F14J16 from chromosome I, complete sequence Length = 106320 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 498 gtcttcttcttctccgtctccg 519 |||||||||||||||||||||| Sbjct: 101893 gtcttcttcttctccgtctccg 101914
>gb|AC010510.6|AC010510 Homo sapiens chromosome 19 clone LLNLF-191G6, complete sequence Length = 42307 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 137 ttccagtttctccttcacctct 158 |||||||||||||||||||||| Sbjct: 4734 ttccagtttctccttcacctct 4755
>gb|AC124744.3| Mus musculus BAC clone RP23-223E16 from 13, complete sequence Length = 199767 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 499 tcttcttcttctccgtctccgt 520 |||||||||||||||||||||| Sbjct: 54114 tcttcttcttctccgtctccgt 54135
>emb|AL731650.26| Mouse DNA sequence from clone RP23-368K3 on chromosome 8, complete sequence Length = 185422 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 540 ctgctgctgctgtcgccgccgc 561 |||||||||||||||||||||| Sbjct: 184517 ctgctgctgctgtcgccgccgc 184538
>ref|XM_550397.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4001 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 160 ctgctgctgctgccgccgccgcggc 136
>ref|NM_191283.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 552 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 51 ctgctgctgctgccgccgccgcggc 27
>ref|NM_015914.5| Homo sapiens thioredoxin domain containing 11 (TXNDC11), mRNA Length = 3047 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 103 ctgctgctgctgccgccgccgcggc 79
>ref|NM_192550.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1140 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 500 cttcttcttctccgtctccgt 520 ||||||||||||||||||||| Sbjct: 426 cttcttcttctccgtctccgt 406
>ref|NM_172710.1| Mus musculus RIKEN cDNA 2310045A20 gene (2310045A20Rik), mRNA Length = 4303 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccg 560 ||||||||||||||||||||| Sbjct: 67 ctgctgctgctgtcgccgccg 47
>gb|AC161600.6| Mus musculus BAC clone RP23-350K3 from chromosome 3, complete sequence Length = 218929 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 538 ctctgctgctgctgtcgccgc 558 ||||||||||||||||||||| Sbjct: 134724 ctctgctgctgctgtcgccgc 134744
>ref|XM_747634.1| Aspergillus fumigatus Af293 small nuclear ribonucleoprotein complex protein Nhp2 (Afu1g13570) partial mRNA Length = 972 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 371 cttgaccacctccttgaccccgcgcttcaggcacttg 407 |||||| || |||||||| ||||| |||||||||||| Sbjct: 630 cttgacgacttccttgacaccgcgtttcaggcacttg 594
>gb|AC007613.8| Homo sapiens chromosome 16 clone RP11-490O6, complete sequence Length = 161146 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 108873 ctgctgctgctgccgccgccgcggc 108897
>gb|AC122522.4| Mus musculus BAC clone RP24-486D23 from chromosome 5, complete sequence Length = 186083 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccg 560 ||||||||||||||||||||| Sbjct: 62114 ctgctgctgctgtcgccgccg 62094
>gb|AC124722.3| Mus musculus BAC clone RP23-389E7 from chromosome 6, complete sequence Length = 193830 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 59098 ctgctgctgctgccgccgccgcggc 59122
>emb|BX649606.1| Aspergillus fumigatus BAC pilot project supercontig; segment 2/3 Length = 348551 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 371 cttgaccacctccttgaccccgcgcttcaggcacttg 407 |||||| || |||||||| ||||| |||||||||||| Sbjct: 307507 cttgacgacttccttgacaccgcgtttcaggcacttg 307543
>dbj|AK027646.1| Homo sapiens cDNA FLJ14740 fis, clone NT2RP3002602, weakly similar to PROBABLE PROTEIN DISULFIDE ISOMERASE ER-60 PRECURSOR (EC 5.3.4.1) Length = 3047 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 103 ctgctgctgctgccgccgccgcggc 79
>gb|AC110792.3| Homo sapiens BAC clone RP11-571I18 from 4, complete sequence Length = 170202 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 169339 ctgctgctgctgccgccgccgcggc 169315
>gb|AF306343.1|AF306343S1 Homo sapiens homeobox protein 2 (GSH2) gene, exon 1 Length = 741 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 539 ctgctgctgctgccgccgccgcggc 515
>gb|AC090648.5| Genomic sequence for Mus musculus, clone RP23-331I23, complete sequence Length = 198695 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 135680 ctgctgctgctgccgccgccgcggc 135656
>gb|AC090649.4| Genomic sequence for Mus musculus, clone RP23-361O12, complete sequence Length = 211611 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 203685 ctgctgctgctgccgccgccgcggc 203709
>gb|AF439445.1| Homo sapiens homeobox protein GSH-2 (GSH2) gene, complete cds Length = 4275 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 772 ctgctgctgctgccgccgccgcggc 748
>gb|AC010654.8|AC010654 Homo sapiens chromosome 16 clone RP11-486I11, complete sequence Length = 148412 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 16591 ctgctgctgctgccgccgccgcggc 16615
>ref|NM_067014.2| Caenorhabditis elegans Y48A6B.3 (Y48A6B.3) mRNA, complete cds Length = 616 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 308 cacatcgataggagagatgtttccagcaa 336 ||||||||| ||||||| ||||||||||| Sbjct: 310 cacatcgattggagagacgtttccagcaa 282
>dbj|AK030487.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330418K09 product:hypothetical Concanavalin A-like lectins/glucanases structure containing protein, full insert sequence Length = 4303 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccg 560 ||||||||||||||||||||| Sbjct: 67 ctgctgctgctgtcgccgccg 47
>dbj|AK037220.1| Mus musculus 6 days neonate skin cDNA, RIKEN full-length enriched library, clone:A030011D21 product:weakly similar to KIAA0746 PROTEIN (FRAGMENT) [Homo sapiens], full insert sequence Length = 2372 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccg 560 ||||||||||||||||||||| Sbjct: 64 ctgctgctgctgtcgccgccg 44
>dbj|AK037182.1| Mus musculus 6 days neonate skin cDNA, RIKEN full-length enriched library, clone:A030006O20 product:peptidyl arginine deiminase, type I, full insert sequence Length = 3756 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 499 tcttcttcttctccgtctccgtgtc 523 |||||||||||||| |||||||||| Sbjct: 3573 tcttcttcttctccttctccgtgtc 3549
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 31726059 ctgctgctgctgccgccgccgcggc 31726083 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 500 cttcttcttctccgtctccgt 520 ||||||||||||||||||||| Sbjct: 22893712 cttcttcttctccgtctccgt 22893732 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 499 tcttcttcttctccgtctccg 519 ||||||||||||||||||||| Sbjct: 14974145 tcttcttcttctccgtctccg 14974125 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 4243373 ctgctgctgctgccgccgccgcggc 4243397
>gb|BC075089.2| Homo sapiens GS homeobox 2, mRNA (cDNA clone MGC:103982 IMAGE:30915389), complete cds Length = 962 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 485 ctgctgctgctgccgccgccgcggc 461
>gb|BC075090.2| Homo sapiens GS homeobox 2, mRNA (cDNA clone MGC:104144 IMAGE:30915601), complete cds Length = 963 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 485 ctgctgctgctgccgccgccgcggc 461
>dbj|AB121692.1| Mus musculus peptidylarginine deiminase gene cluster (Padi2, Padi1, Padi23, Padi4, Padi6), complete cds Length = 240498 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 499 tcttcttcttctccgtctccgtgtc 523 |||||||||||||| |||||||||| Sbjct: 149097 tcttcttcttctccttctccgtgtc 149073
>dbj|AB196458.1| Oncorhynchus mykiss HSP90BB mRNA for heat shock 90kDa protein 1 beta isoform b, complete cds Length = 2694 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 370 tcttgaccacctccttgaccc 390 ||||||||||||||||||||| Sbjct: 657 tcttgaccacctccttgaccc 637
>dbj|AB196457.1| Oncorhynchus mykiss HSP90BA mRNA for heat shock 90kDa protein 1 beta isoform a, complete cds Length = 2683 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 370 tcttgaccacctccttgaccc 390 ||||||||||||||||||||| Sbjct: 664 tcttgaccacctccttgaccc 644
>gb|AC007226.3|AC007226 Homo sapiens chromosome 16 clone RPCI-11_520B23, complete sequence Length = 159613 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 131834 ctgctgctgctgccgccgccgcggc 131810
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0700A11 Length = 136321 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 500 cttcttcttctccgtctccgt 520 ||||||||||||||||||||| Sbjct: 97269 cttcttcttctccgtctccgt 97289
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503C12 Length = 147180 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 139791 ctgctgctgctgccgccgccgcggc 139815
>dbj|AP006530.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1329D01 Length = 141938 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 499 tcttcttcttctccgtctccg 519 ||||||||||||||||||||| Sbjct: 392 tcttcttcttctccgtctccg 372
>dbj|AP003375.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1414_E05 Length = 105222 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 4097 ctgctgctgctgccgccgccgcggc 4121
>gb|AF135117.1|AF135117 Salmo salar heat shock protein hsp90 beta (hsp90 beta) mRNA, complete cds Length = 2625 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 370 tcttgaccacctccttgaccc 390 ||||||||||||||||||||| Sbjct: 692 tcttgaccacctccttgaccc 672
>ref|XM_341223.2| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 2310045A20 (LOC360945), mRNA Length = 4866 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccg 560 ||||||||||||||||||||| Sbjct: 369 ctgctgctgctgtcgccgccg 349
>dbj|AP005295.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1695_D07 Length = 110585 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 499 tcttcttcttctccgtctccg 519 ||||||||||||||||||||| Sbjct: 72156 tcttcttcttctccgtctccg 72176
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1174_D05 Length = 128525 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 81340 ctgctgctgctgccgccgccgcggc 81364
>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0666G04 Length = 141983 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 23143 ctgctgctgctgccgccgccgcggc 23167
>dbj|AK122068.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117G13, full insert sequence Length = 4002 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 161 ctgctgctgctgccgccgccgcggc 137
>dbj|AK025430.1| Homo sapiens cDNA: FLJ21777 fis, clone HEP00173 Length = 2618 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 781 ctgctgctgctgccgccgccgcggc 805
>dbj|AK099720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088F12, full insert sequence Length = 1660 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 499 tcttcttcttctccgtctccg 519 ||||||||||||||||||||| Sbjct: 116 tcttcttcttctccgtctccg 136
>dbj|AK107714.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-E01, full insert sequence Length = 677 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 499 tcttcttcttctccgtctccg 519 ||||||||||||||||||||| Sbjct: 108 tcttcttcttctccgtctccg 128
>dbj|AK069648.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026P15, full insert sequence Length = 963 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 150 ctgctgctgctgccgccgccgcggc 126
>dbj|AK122362.1| Mus musculus mRNA for mKIAA0746 protein Length = 4510 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccg 560 ||||||||||||||||||||| Sbjct: 200 ctgctgctgctgtcgccgccg 180
>gb|U35239.1|OCU35239 Oryctolagus cuniculus podocalyxin-like protein 1 (PCLP1) mRNA, complete cds Length = 5313 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 ctgctgctgctgtcgccgccg 560 ||||||||||||||||||||| Sbjct: 337 ctgctgctgctgtcgccgccg 357
>gb|DQ079796.1| Palaemonetes paludosus voucher MLP124 28S large subunit ribosomal RNA gene, partial sequence Length = 2696 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccgcggc 564 ||||||||| ||||||||||||||| Sbjct: 2139 ctgctgctggtgtcgccgccgcggc 2115
>emb|AL807805.7| Mouse DNA sequence from clone RP23-48K5 on chromosome 4, complete sequence Length = 183495 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 499 tcttcttcttctccgtctccgtgtc 523 |||||||||||||| |||||||||| Sbjct: 77424 tcttcttcttctccttctccgtgtc 77448
>ref|NM_133267.1| Homo sapiens GS homeobox 2 (GSH2), mRNA Length = 1262 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 777 ctgctgctgctgccgccgccgcggc 753
>emb|AL513356.8| Mouse DNA sequence from clone RP23-193O17 on chromosome X, complete sequence Length = 216238 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 tttctccttcacctcttcagt 163 ||||||||||||||||||||| Sbjct: 127886 tttctccttcacctcttcagt 127866
>gb|BC002856.1| Homo sapiens thioredoxin domain containing 11, mRNA (cDNA clone MGC:4177 IMAGE:3635977), complete cds Length = 3201 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 158 ctgctgctgctgccgccgccgcggc 134
>gb|BC018635.2| Homo sapiens thioredoxin domain containing 11, mRNA (cDNA clone IMAGE:3677962), complete cds Length = 1730 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 159 ctgctgctgctgccgccgccgcggc 135
>gb|AC110298.5| Homo sapiens BAC clone RP11-367N1 from 4, complete sequence Length = 23992 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 1137 ctgctgctgctgccgccgccgcggc 1113
>dbj|AB028838.1| Homo sapiens mRNA for homeobox protein GSH-2, complete cds Length = 1262 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgccgcggc 564 |||||||||||| |||||||||||| Sbjct: 777 ctgctgctgctgccgccgccgcggc 753
>gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, complete sequence Length = 248540 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gctgctgctgtcgccgccgc 561 |||||||||||||||||||| Sbjct: 248307 gctgctgctgtcgccgccgc 248288
>ref|NM_101533.3| Arabidopsis thaliana oxidoreductase AT1G16720 mRNA, complete cds Length = 2100 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 215 tcttcttcttctccgtctcc 234
>ref|NM_128786.3| Arabidopsis thaliana ZIP3; zinc ion transporter AT2G32270 (ZIP3) mRNA, complete cds Length = 1325 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 86 tcttcttcttctccgtctcc 105
>ref|NM_104423.2| Arabidopsis thaliana protein binding AT1G55480 mRNA, complete cds Length = 1329 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 389 tcttcttcttctccgtctcc 370
>gb|AC024817.1| Caenorhabditis elegans cosmid Y54G2A, complete sequence Length = 286680 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 498 gtcttcttcttctccgtctc 517 |||||||||||||||||||| Sbjct: 251461 gtcttcttcttctccgtctc 251480
>gb|BC086554.1| Rattus norvegicus heat shock factor 2, mRNA (cDNA clone MGC:105394 IMAGE:7302950), complete cds Length = 2570 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gctgctgctgtcgccgccgc 561 |||||||||||||||||||| Sbjct: 85 gctgctgctgtcgccgccgc 104
>ref|XM_465535.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1309 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 cggcgagcggcttggcgatg 479 |||||||||||||||||||| Sbjct: 554 cggcgagcggcttggcgatg 535
>gb|AC154279.2| Mus musculus BAC clone RP24-271E12 from chromosome 17, complete sequence Length = 173729 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 tgctcttgaccacctccttg 386 |||||||||||||||||||| Sbjct: 78295 tgctcttgaccacctccttg 78276
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 452 cttcttgccggcgagcggcttggc 475 |||||||||||||| ||||||||| Sbjct: 580215 cttcttgccggcgatcggcttggc 580238
>gb|AC110569.8| Mus musculus chromosome 15, clone RP23-309J17, complete sequence Length = 213398 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ttcttggagagcttcttgcc 460 |||||||||||||||||||| Sbjct: 152152 ttcttggagagcttcttgcc 152133
>gb|AC132902.9| Mus musculus chromosome 13, clone RP24-286O14, complete sequence Length = 160759 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 152594 tcttcttcttctccgtctcc 152575
>gb|AC140051.10| Mus musculus chromosome 12, clone RP23-296J15, complete sequence Length = 205123 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 tttcttggagagcttcttgc 459 |||||||||||||||||||| Sbjct: 204114 tttcttggagagcttcttgc 204133
>gb|AC164002.4| Mus musculus chromosome 3, clone RP24-114A9, complete sequence Length = 198340 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 tgtattccgattccagtttctcct 150 ||||||| |||||||||||||||| Sbjct: 32735 tgtattctgattccagtttctcct 32712
>gb|AC090330.22| Homo sapiens chromosome 18, clone RP11-813B21, complete sequence Length = 160530 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 ctgctgctgctgtcgccgcc 559 |||||||||||||||||||| Sbjct: 53360 ctgctgctgctgtcgccgcc 53379
>gb|AC121992.3| Mus musculus BAC clone RP24-300I17 from chromosome 12, complete sequence Length = 139943 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 tttcttggagagcttcttgc 459 |||||||||||||||||||| Sbjct: 65039 tttcttggagagcttcttgc 65020
>ref|XM_756827.1| Ustilago maydis 521 hypothetical protein (UM05773.1) partial mRNA Length = 1590 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 540 ctgctgctgctgtcgccgccgcgg 563 |||||||||||| ||||||||||| Sbjct: 245 ctgctgctgctgccgccgccgcgg 268
>emb|AM039950.1| Xanthomonas campestris pv. vesicatoria plasmid pXCV38, complete genome Length = 38116 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 451 gcttcttgccggcgagcggcttgg 474 ||||||||||||| |||||||||| Sbjct: 1356 gcttcttgccggccagcggcttgg 1333
>ref|XM_390480.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10304.1) partial mRNA Length = 720 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 370 tcttgaccacctccttgaccccgcgctt 397 ||||||| ||||||||||| |||||||| Sbjct: 352 tcttgacgacctccttgacaccgcgctt 325
>gb|AC139348.4| Mus musculus BAC clone RP24-336F19 from chromosome 18, complete sequence Length = 145012 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 26545 tcttcttcttctccgtctcc 26526
>gb|AC123867.4| Mus musculus BAC clone RP23-127O13 from chromosome 14, complete sequence Length = 216834 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 538 ctctgctgctgctgtcgccgccgc 561 |||||||||||||| ||||||||| Sbjct: 196423 ctctgctgctgctgccgccgccgc 196400
>ref|XM_804682.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506167.20) partial mRNA Length = 3453 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gctgctgctgtcgccgccgc 561 |||||||||||||||||||| Sbjct: 3359 gctgctgctgtcgccgccgc 3340
>gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14, complete sequence Length = 87967 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 56864 tcttcttcttctccgtctcc 56883
>gb|AC129305.4| Mus musculus BAC clone RP24-472F1 from chromosome 12, complete sequence Length = 159429 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 tttcttggagagcttcttgc 459 |||||||||||||||||||| Sbjct: 53125 tttcttggagagcttcttgc 53144
>gb|AC124419.4| Mus musculus BAC clone RP24-319P11 from chromosome 18, complete sequence Length = 140103 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 16192 tcttcttcttctccgtctcc 16211
>ref|XM_849883.1| PREDICTED: Canis familiaris similar to BCL2 binding component 3 (LOC612153), mRNA Length = 1039 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgcc 559 |||||||||||||||||||| Sbjct: 20 ctgctgctgctgtcgccgcc 1
>emb|AL590785.7| Human DNA sequence from clone RP11-321C1 on chromosome 6, complete sequence Length = 188159 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 266 tgggacattggcttcctcacaaag 289 ||||||||||||||| |||||||| Sbjct: 174420 tgggacattggcttcatcacaaag 174443
>emb|AL034424.9|HS257E24 Human DNA sequence from clone RP1-257E24 on chromosome 20q12-13.1 Contains the 3' end of the SLC13A3 gene for member 3 of solute carrier family 13 (sodium-dependent dicarboxylate transporter), the C20orf123 gene for chromosome 20 open reading frame 123, the 5' end of a novel zinc finger protein gene, ESTs, STSs and GSSs, complete sequence Length = 127735 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 tcatggttcctccaggctgg 63 |||||||||||||||||||| Sbjct: 29417 tcatggttcctccaggctgg 29398
>gb|AC160464.3| Mus musculus chromosome 7, clone RP23-256J14, complete sequence Length = 175716 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gctgctgctgtcgccgccgc 561 |||||||||||||||||||| Sbjct: 136911 gctgctgctgtcgccgccgc 136930
>ref|XM_776682.1| PREDICTED: Strongylocentrotus purpuratus similar to EH domain binding protein 1 (LOC576366), mRNA Length = 3213 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 1244 tcttcttcttctccgtctcc 1225
>gb|AY079359.1| Arabidopsis thaliana unknown protein (At1g55480) mRNA, complete cds Length = 1039 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 251 tcttcttcttctccgtctcc 232
>gb|AY039926.1| Arabidopsis thaliana unknown protein (At1g55480) mRNA, complete cds Length = 1306 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 345 tcttcttcttctccgtctcc 326
>gb|AC124822.10| Mus musculus chromosome 3, clone RP24-217O18, complete sequence Length = 168065 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 tgtattccgattccagtttctcct 150 ||||||| |||||||||||||||| Sbjct: 77245 tgtattctgattccagtttctcct 77268
>gb|AC151836.3| Mus musculus BAC clone RP23-359F5 from chromosome 14, complete sequence Length = 230502 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 538 ctctgctgctgctgtcgccgccgc 561 |||||||||||||| ||||||||| Sbjct: 74966 ctctgctgctgctgccgccgccgc 74943
>gb|AY128723.1| Arabidopsis thaliana unknown protein (At1g16720) mRNA, complete cds Length = 1863 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 142 tcttcttcttctccgtctcc 161
>gb|AC011907.4| Drosophila melanogaster 3L BAC RP98-18B21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164597 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 529 ccatagtttctctgctgctgctgt 552 ||||||||| |||||||||||||| Sbjct: 87387 ccatagtttatctgctgctgctgt 87364
>gb|AE005802.1| Caulobacter crescentus CB15 section 128 of 359 of the complete genome Length = 10827 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 452 cttcttgccggcgagcggcttggc 475 |||||||||||||| ||||||||| Sbjct: 2798 cttcttgccggcgatcggcttggc 2775
>gb|AE005943.1| Caulobacter crescentus CB15 section 269 of 359 of the complete genome Length = 10106 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 457 tgccggcgagcggcttggcgatgg 480 ||||||||| |||||||||||||| Sbjct: 5384 tgccggcgaccggcttggcgatgg 5407
>dbj|AK096190.1| Homo sapiens cDNA FLJ38871 fis, clone MESAN2013611, moderately similar to Ciona savignyi mRNA for PEM-3 Length = 3381 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 ctgctgctgctgtcgccgcc 559 |||||||||||||||||||| Sbjct: 23 ctgctgctgctgtcgccgcc 42
>gb|AE012211.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 119 of 460 of the complete genome Length = 14128 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 542 gctgctgctgtcgccgccgcggca 565 |||||||||| ||||||||||||| Sbjct: 4026 gctgctgctggcgccgccgcggca 4003
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 tcttgccggcgagcggcttg 473 |||||||||||||||||||| Sbjct: 536060 tcttgccggcgagcggcttg 536041
>ref|NM_167834.1| Drosophila melanogaster CG17090-RB, transcript variant B (CG17090), mRNA Length = 6295 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 529 ccatagtttctctgctgctgctgt 552 ||||||||| |||||||||||||| Sbjct: 3450 ccatagtttatctgctgctgctgt 3427
>dbj|AB204520.1| Malus sylvestris SPMS mRNA for spermine synthase, complete cds Length = 1571 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 236 tcttcttcttctccgtctcc 217
>ref|NM_138194.2| Drosophila melanogaster CG17090-RA, transcript variant A (CG17090), mRNA Length = 6215 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 529 ccatagtttctctgctgctgctgt 552 ||||||||| |||||||||||||| Sbjct: 3370 ccatagtttatctgctgctgctgt 3347
>gb|AC005700.3| Arabidopsis thaliana chromosome 2 clone T32F6 map TEn5, complete sequence Length = 100424 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 83932 tcttcttcttctccgtctcc 83913
>ref|NM_016626.2| Homo sapiens ring finger and KH domain containing 2 (RKHD2), mRNA Length = 3493 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 ctgctgctgctgtcgccgcc 559 |||||||||||||||||||| Sbjct: 113 ctgctgctgctgtcgccgcc 132
>ref|XM_938433.1| PREDICTED: Homo sapiens chromosome 20 open reading frame 123 (C20orf123), mRNA Length = 1948 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 tcatggttcctccaggctgg 63 |||||||||||||||||||| Sbjct: 1757 tcatggttcctccaggctgg 1776
>ref|XM_496476.2| PREDICTED: Homo sapiens chromosome 20 open reading frame 123 (C20orf123), mRNA Length = 1948 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 tcatggttcctccaggctgg 63 |||||||||||||||||||| Sbjct: 1757 tcatggttcctccaggctgg 1776
>gb|AY062632.1| Arabidopsis thaliana Unknown protein (At1g16720; F17F16.7) mRNA, complete cds Length = 2040 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 215 tcttcttcttctccgtctcc 234
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 452 cttcttgccggcgagcggcttggc 475 |||||||||||||| ||||||||| Sbjct: 2732367 cttcttgccggcgatcggcttggc 2732390
>gb|AY058785.1| Drosophila melanogaster SD08329 full length cDNA Length = 5670 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 529 ccatagtttctctgctgctgctgt 552 ||||||||| |||||||||||||| Sbjct: 2818 ccatagtttatctgctgctgctgt 2795
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 452 cttcttgccggcgagcggcttggc 475 |||||||||||||| ||||||||| Sbjct: 3096265 cttcttgccggcgatcggcttggc 3096288
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 542 gctgctgctgtcgccgccgcggca 565 |||||||||| ||||||||||||| Sbjct: 3736753 gctgctgctggcgccgccgcggca 3736776
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 tcttgccggcgagcggcttg 473 |||||||||||||||||||| Sbjct: 877977 tcttgccggcgagcggcttg 877958
>dbj|AK086516.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930033K23 product:unclassifiable, full insert sequence Length = 3340 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 tgctcttgaccacctccttg 386 |||||||||||||||||||| Sbjct: 1685 tgctcttgaccacctccttg 1666
>gb|AC139197.10| Mus musculus chromosome 15, clone RP24-119N11, complete sequence Length = 172693 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 ttcttggagagcttcttgcc 460 |||||||||||||||||||| Sbjct: 4311 ttcttggagagcttcttgcc 4292
>gb|AC148688.1| Macaca mulatta Major Histocompatibility Complex BAC MMU218K02, complete sequence Length = 182826 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 tcacaaagtatgggaagatg 301 |||||||||||||||||||| Sbjct: 181168 tcacaaagtatgggaagatg 181149
>gb|AF353514.1|AF353514 Eimeria tenella ribosomal protein P2 mRNA, complete cds Length = 691 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gctgctgctgtcgccgccgc 561 |||||||||||||||||||| Sbjct: 344 gctgctgctgtcgccgccgc 325
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 cttcttcttctccgtctccg 519 |||||||||||||||||||| Sbjct: 22211412 cttcttcttctccgtctccg 22211393
>gb|AC007374.6|AC007374 Homo sapiens chromosome 14 clone RP11-325L17 map 14q31, complete sequence Length = 190565 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 43506 tcttcttcttctccgtctcc 43487
>emb|BX818474.1|CNS0AB28 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL81ZA06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1122 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 306 tcttcttcttctccgtctcc 287
>emb|BX820556.1|CNS0A8MP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH47ZH10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1323 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 85 tcttcttcttctccgtctcc 104
>emb|BX820329.1|CNS0A8M1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH23ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1306 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 87 tcttcttcttctccgtctcc 106
>dbj|AB190499.1| Arabidopsis thaliana ZKT mRNA for hypothetical protein, complete cds Length = 1238 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 360 tcttcttcttctccgtctcc 341
>gb|AC024706.6| Homo sapiens BAC clone RP11-119J20 from 4, complete sequence Length = 169557 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 caaaatcatgctacataata 25 |||||||||||||||||||| Sbjct: 5262 caaaatcatgctacataata 5281
>emb|BX841785.1|CNS09Y5L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZF05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1155 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 307 tcttcttcttctccgtctcc 288
>ref|NM_031694.2| Rattus norvegicus heat shock factor 2 (Hsf2), mRNA Length = 2570 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gctgctgctgtcgccgccgc 561 |||||||||||||||||||| Sbjct: 85 gctgctgctgtcgccgccgc 104
>gb|AY069587.1| Drosophila melanogaster LD33388 full insert cDNA Length = 2917 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 529 ccatagtttctctgctgctgctgt 552 ||||||||| |||||||||||||| Sbjct: 842 ccatagtttatctgctgctgctgt 819
>gb|AC011808.4|AC011808 Arabidopsis thaliana chromosome I BAC F19K19 genomic sequence, complete sequence Length = 93485 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 15357 tcttcttcttctccgtctcc 15338
>gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BAC F17F16 genomic sequence, complete sequence Length = 90498 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 77634 tcttcttcttctccgtctcc 77615
>dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0070E11 Length = 142855 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 cttcttcttctccgtctccg 519 |||||||||||||||||||| Sbjct: 31310 cttcttcttctccgtctccg 31291
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15 Length = 157981 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 cttcttcttctccgtctccg 519 |||||||||||||||||||| Sbjct: 132905 cttcttcttctccgtctccg 132886
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 agagcttcttgccggcgagc 467 |||||||||||||||||||| Sbjct: 4437723 agagcttcttgccggcgagc 4437704
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 ggcgagcggcttggcgatgg 480 |||||||||||||||||||| Sbjct: 2677244 ggcgagcggcttggcgatgg 2677263 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 tcttgccggcgagcggcttg 473 |||||||||||||||||||| Sbjct: 227061 tcttgccggcgagcggcttg 227080
>dbj|AP004850.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1342_D02 Length = 125460 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 cggcgagcggcttggcgatg 479 |||||||||||||||||||| Sbjct: 56118 cggcgagcggcttggcgatg 56099
>ref|XM_310741.2| Anopheles gambiae str. PEST ENSANGP00000021947 (ENSANGG00000019458), partial mRNA Length = 6405 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 tctgctgctgctgtcgccgc 558 |||||||||||||||||||| Sbjct: 1374 tctgctgctgctgtcgccgc 1393
>gb|AF172641.1|AF172641 Rattus norvegicus heat shock transcription factor hsf2 gene, promoter region and partial cds Length = 2641 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gctgctgctgtcgccgccgc 561 |||||||||||||||||||| Sbjct: 2546 gctgctgctgtcgccgccgc 2565
>dbj|AK071209.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087H13, full insert sequence Length = 1309 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 cggcgagcggcttggcgatg 479 |||||||||||||||||||| Sbjct: 554 cggcgagcggcttggcgatg 535
>gb|AE001439.1| Helicobacter pylori J99, complete genome Length = 1643831 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 gtcatcaccaacacgcagca 205 |||||||||||||||||||| Sbjct: 1549798 gtcatcaccaacacgcagca 1549817
>emb|Z22811.1|SCSLA2PA S.cerevisiae of Sla2p gene Length = 3924 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 tctgctgctgctgtcgccgc 558 |||||||||||||||||||| Sbjct: 2474 tctgctgctgctgtcgccgc 2455
>emb|Z71519.1|SCYNL243W S.cerevisiae chromosome XIV reading frame ORF YNL243w Length = 3827 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 tctgctgctgctgtcgccgc 558 |||||||||||||||||||| Sbjct: 2242 tctgctgctgctgtcgccgc 2223
>emb|AL121784.5|CNS01DSH Human chromosome 14 DNA sequence BAC R-305I3 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 180523 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 21025 tcttcttcttctccgtctcc 21006
>gb|AE003468.3| Drosophila melanogaster chromosome 3L, section 2 of 83 of the complete sequence Length = 307657 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 529 ccatagtttctctgctgctgctgt 552 ||||||||| |||||||||||||| Sbjct: 252626 ccatagtttatctgctgctgctgt 252603
>gb|AY986818.1| Arabidopsis thaliana GAN mRNA, complete cds Length = 1033 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 257 tcttcttcttctccgtctcc 238
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 gctgctgtcgccgccgcggc 564 |||||||||||||||||||| Sbjct: 4224882 gctgctgtcgccgccgcggc 4224863
>gb|AF033537.1|AF033537 Arabidopsis thaliana putative zinc transporter (ZIP3) mRNA, complete cds Length = 1249 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 76 tcttcttcttctccgtctcc 95
>gb|AC173485.1| Mus musculus BAC clone RP23-59N18 from chromosome 17, complete sequence Length = 199992 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 83057 tcttcttcttctccgtctcc 83038
>gb|L12352.1|YSCMOP2G Saccharomyces cerevisiae transmembrane protein (MOP2) gene Length = 4641 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 tctgctgctgctgtcgccgc 558 |||||||||||||||||||| Sbjct: 2451 tctgctgctgctgtcgccgc 2432
>emb|AL845364.4| Mouse DNA sequence from clone RP23-301M3 on chromosome 4, complete sequence Length = 205273 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 15694 tcttcttcttctccgtctcc 15713
>emb|AL805923.6| Mouse DNA sequence from clone RP23-65B16 on chromosome 4, complete sequence Length = 182774 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 tcttcttcttctccgtctcc 518 |||||||||||||||||||| Sbjct: 134457 tcttcttcttctccgtctcc 134476
>gb|AC163629.5| Mus musculus BAC clone RP24-542G7 from chromosome 17, complete sequence Length = 198902 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 tgctcttgaccacctccttg 386 |||||||||||||||||||| Sbjct: 12983 tgctcttgaccacctccttg 13002
>gb|AF438303.1| Leishmania donovani microsatellite LIST7113 sequence Length = 400 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 ctgctgctgctgtcgccgcc 559 |||||||||||||||||||| Sbjct: 27 ctgctgctgctgtcgccgcc 8 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,401,408 Number of Sequences: 3902068 Number of extensions: 6401408 Number of successful extensions: 139609 Number of sequences better than 10.0: 196 Number of HSP's better than 10.0 without gapping: 200 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 138024 Number of HSP's gapped (non-prelim): 1582 length of query: 571 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 548 effective length of database: 17,143,297,704 effective search space: 9394527141792 effective search space used: 9394527141792 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
