| Clone Name | rbags7o08 |
|---|---|
| Clone Library Name | barley_pub |
>E134_MAIZE (Q9ZT66) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-)| Length = 303 Score = 100 bits (249), Expect = 4e-21 Identities = 47/104 (45%), Positives = 67/104 (64%) Frame = -1 Query: 644 DADRPIAVWIKEHTAGKAFEEAKPVIAALKEQGASSVGAAGYCWGAKVVAELAKANEIQT 465 D + W++ H+ KA E+AKP+ AALK++G SV GYCWG K+ E+ K ++++ Sbjct: 111 DDKKNFTEWLEAHSPVKAAEDAKPLFAALKKEG-KSVAVGGYCWGGKLSVEVGKTSDVKA 169 Query: 464 AVMSHPSFVTVDDIKEVKCPIAVLGAETDVMSPPELVKEFEQVL 333 +SHP VT DD+KEVK PI +LGA+ D +PP+ V F VL Sbjct: 170 VCLSHPYSVTADDMKEVKWPIEILGAQNDTTTPPKEVYRFVHVL 213
>YAE9_YEAST (P39721) Protein YAL049C| Length = 246 Score = 68.6 bits (166), Expect = 2e-11 Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 7/157 (4%) Frame = -1 Query: 641 ADRPIA--VWIKEHTAGKAFEEAKPVIAALK-EQGASSVGAAGYCWGAKVVAELAKANE- 474 +D+PI W + H+ + + LK E +G GYC+GAK + + Sbjct: 86 SDKPIDRDAWFQRHSPEVTKKIVDGFMKLLKLEYDPKFIGVVGYCFGAKFAVQHISGDGG 145 Query: 473 -IQTAVMSHPSFVTVDDIKEV--KCPIAVLGAETDVMSPPELVKEFEQVLSSNSGIAHFV 303 A ++HPSFV++++I+ + K PI + AE D + P L E+ L N + + Sbjct: 146 LANAAAIAHPSFVSIEEIEAIDSKKPILISAAEEDHIFPANLRHLTEEKLKDNHA-TYQL 204 Query: 302 KIFPGVSHGWTVRYNGEDAAAVKSAEEALTDMIDWFN 192 +F GV+HG+ R + A + E+ L D I WFN Sbjct: 205 DLFSGVAHGFAARGDISIPAVKYAKEKVLLDQIYWFN 241
>YB4E_SCHPO (O14359) Hypothetical protein C30D10.14 in chromosome II| Length = 249 Score = 52.0 bits (123), Expect = 2e-06 Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 2/105 (1%) Frame = -1 Query: 581 AKPVIAALKEQGAS-SVGAAGYCWGAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCP 405 AK V A G + ++G G+CWGAKV+ + HPSF D V CP Sbjct: 117 AKVVEAVRANHGPNVTIGTYGFCWGAKVLVTYPATIDFVGIASCHPSFPDSADAANVHCP 176 Query: 404 IAVLGAETDVMSPPELVKEFEQVLSSNSGIA-HFVKIFPGVSHGW 273 + L ++ + +++KE+E+ +N A + F + HGW Sbjct: 177 VLFLCSKDE---DAKIIKEWEEAFKTNPAYAKSSFETFSDMFHGW 218
>RTJK_DROME (P21328) RNA-directed DNA polymerase from mobile element jockey (EC| 2.7.7.49) (Reverse transcriptase) Length = 916 Score = 31.6 bits (70), Expect = 2.3 Identities = 19/74 (25%), Positives = 34/74 (45%) Frame = -1 Query: 449 PSFVTVDDIKEVKCPIAVLGAETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSHGWT 270 P+ V ++ E IA +T V++ + + +L++ SG+ ++ F + W Sbjct: 661 PTHTPVTEVDEEDVLIATYADDTAVLT------KSKSILAATSGLQEYLDAFQQWAENWN 714 Query: 269 VRYNGEDAAAVKSA 228 VR N E A V A Sbjct: 715 VRINAEKCANVTFA 728
>NXF1_DROME (Q9U1H9) Nuclear RNA export factor 1 (Protein tip-associating)| (Protein small bristles) (DmNXF1) Length = 672 Score = 31.2 bits (69), Expect = 3.0 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 5/79 (6%) Frame = -1 Query: 506 KVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPI---AVLGAETDVM--SPPELVKEFE 342 K+ +AK IQT + F D+K+V CP+ V+GA D+M + P+L Sbjct: 202 KMKVTMAKRYNIQTKALDLSRFHADPDLKQVFCPLFRQNVMGAAIDIMCDNIPDL----- 256 Query: 341 QVLSSNSGIAHFVKIFPGV 285 + L+ N ++ F GV Sbjct: 257 EALNLNDNSISSMEAFKGV 275
>DLHH_METEX (P71505) Putative carboxymethylenebutenolidase precursor (EC| 3.1.1.45) (Dienelactone hydrolase) (DLH) Length = 291 Score = 31.2 bits (69), Expect = 3.0 Identities = 32/173 (18%), Positives = 63/173 (36%), Gaps = 14/173 (8%) Frame = -1 Query: 665 GDPYVPEDADRPIAVWIKEHTAGKAFEEAKPVIAALKEQGASS---VGAAGYCWGAKVVA 495 GD D + ++ + + + + +A K G + +G G+CWG ++ Sbjct: 118 GDVSTLTDIQQIVSEVVSKVPDDQVMSDLDAAVAFAKGTGKADTARLGITGFCWGGRITW 177 Query: 494 ELAKAN-EIQTAVMSHPSFV----------TVDDIKEVKCPIAVLGAETDVMSPPELVKE 348 A N ++ V + V VD ++K P+ L D P + Sbjct: 178 LYAAHNPAVKAGVAWYGRLVGDSSALMPKNPVDVAADLKAPVLGLYGGADQGIPVATIDR 237 Query: 347 FEQVLSSNSGIAHFVKIFPGVSHGWTVRYNGEDAAAVKSAEEALTDMIDWFNK 189 ++ + FV ++P H + Y A + A++ + DWF + Sbjct: 238 MKEACRAAGKTCDFV-VYPEAGHAFHADYRPSYRA--EPAQDGWKRLQDWFRQ 287
>MLR_LUMTE (P80164) Myosin regulatory light chain, striated muscle, 25 kDa| isoform (LC25) Length = 195 Score = 29.6 bits (65), Expect = 8.7 Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 18/152 (11%) Frame = -1 Query: 587 EEAKPVIAALKEQGASSVGAAGYCWGAKVVAELAKANEIQ------TAV-MSHPSFVTVD 429 EEA AA E+ A + AA V A L K N+IQ T + + D Sbjct: 20 EEAPAAAAAPAEEAAPTPSAAPIHKVGNVFA-LFKQNQIQEFKEAFTMIDQDRDGIIGPD 78 Query: 428 DIKEVKCPIAVLGAETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSHGWTVRYNGED 249 D+ + +G E D P++VKE + HF+ +F HG D Sbjct: 79 DLGNI---FQQIGREVD----PKVVKEMLAESAEKLNFTHFLTLFGEKLHGTDTEGTLRD 131 Query: 248 AAAV-----------KSAEEALTDMIDWFNKN 186 A A+ + ++ LT++ D +NK+ Sbjct: 132 AFALFDEDKLGYLLEEYVKDLLTNVGDQYNKD 163
>Y2373_BACSK (Q5WFF2) UPF0348 protein ABC2373| Length = 405 Score = 29.6 bits (65), Expect = 8.7 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%) Frame = -1 Query: 512 GAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPIAVLGAETDVMSPPELVKEF--EQ 339 GA +V EL A +QTA VT+ + ++C + G+E ++P + EF + Sbjct: 63 GADLVVELPYAYSVQTAERFAEGAVTI--LAALRCSVLNFGSEKGEIAPFYALAEFMNDH 120 Query: 338 VLSSNSGIAHFVKIFPGVSH 279 ++ N + F+K GVS+ Sbjct: 121 QVAFNHHVKQFLK--DGVSY 138
>METX_MOOTA (Q2RIW8) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine| O-trans-acetylase) (Homoserine transacetylase) (HTA) Length = 374 Score = 29.6 bits (65), Expect = 8.7 Identities = 12/48 (25%), Positives = 24/48 (50%) Frame = -1 Query: 422 KEVKCPIAVLGAETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSH 279 ++ CP +G +D + PP V+E ++++ G A + +I H Sbjct: 300 RDFPCPCLGIGISSDFLFPPYQVQEIVRMINDGGGHARYAEIDSPYGH 347 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,397,769 Number of Sequences: 219361 Number of extensions: 1835717 Number of successful extensions: 5231 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 5067 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5227 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6541540170 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)