ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags7o08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK060876.1| Oryza sativa (japonica cultivar-group) cDNA clon... 335 1e-88
2dbj|AK101551.1| Oryza sativa (japonica cultivar-group) cDNA clon... 323 4e-85
3dbj|AK073623.1| Oryza sativa (japonica cultivar-group) cDNA clon... 323 4e-85
4gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome... 149 1e-32
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
6gb|AY104092.1| Zea mays PCO081688 mRNA sequence 137 5e-29
7dbj|AK101507.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 5e-20
8gb|BT016986.1| Zea mays clone EK07D2304D04.c mRNA sequence 84 7e-13
9gb|U58749.1| Caenorhabditis elegans cosmid B0496, complete sequence 46 0.15
10emb|Y10983.1|GMP450CP9 Glycine max mRNA for cytochrome P450-like... 46 0.15
11gb|AC139344.17| Medicago truncatula clone mth2-34b22, complete s... 44 0.59
12gb|AC126695.4| Mus musculus BAC clone RP23-313D2 from 18, comple... 42 2.3
13gb|AC106772.3| Homo sapiens chromosome 5 clone RP11-310P5, compl... 42 2.3
14ref|XM_956627.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.2
15ref|XM_326600.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.2
16gb|AC134869.4| Mus musculus BAC clone RP23-137C6 from chromosome... 40 9.2
17gb|AC113125.8| Mus musculus chromosome 14, clone RP23-350B18, co... 40 9.2
18gb|AC122279.3| Mus musculus BAC clone RP23-237J8 from chromosome... 40 9.2
19gb|AC125350.3| Mus musculus BAC clone RP23-423B11 from chromosom... 40 9.2
20emb|AL603755.4| Human DNA sequence from clone RP11-136G2 on chro... 40 9.2
21emb|AL356672.9| Human DNA sequence from clone RP11-452D24 on chr... 40 9.2
22emb|AL009183.10|HS892F13 Human DNA sequence from clone RP5-892F1... 40 9.2
23emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS... 40 9.2
24gb|AC164166.2| Mus musculus BAC clone RP23-88C18 from chromosome... 40 9.2
25emb|AL670008.1|NCB13O8 Neurospora crassa DNA linkage group V BAC... 40 9.2
26gb|AE014180.1| Mus musculus piebald deletion region section 8 of... 40 9.2
27gb|AC090639.6| Homo sapiens chromosome 11, clone RP11-1114G3, co... 40 9.2
28dbj|AK138648.1| Mus musculus adult male spinal cord cDNA, RIKEN ... 40 9.2
29dbj|AK161804.1| Mus musculus 13 days embryo male testis cDNA, RI... 40 9.2
30gb|AC122472.5| Mus musculus BAC clone RP24-323G20 from chromosom... 40 9.2
31dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome 40 9.2
32gb|AC096664.1| Homo sapiens BAC clone RP11-240J3 from 2, complet... 40 9.2
33gb|AC156272.6| Mus musculus 10 BAC RP24-244K5 (Roswell Park Canc... 40 9.2
34emb|AL928547.12| Mouse DNA sequence from clone RP23-226B16 on ch... 40 9.2
35emb|AL807807.11| Mouse DNA sequence from clone RP23-284L15 on ch... 40 9.2
36emb|CT030736.8| Mouse DNA sequence from clone RP23-396K21 on chr... 40 9.2
37gb|AC004386.1|AC004386 Homo Sapiens Chromosome X clone bWXD691, ... 40 9.2
38gb|AC002418.1|AC002418 Human Chromosome X, complete sequence 40 9.2
39gb|AC117208.3| Mus musculus BAC clone RP23-279D15 from 10, compl... 40 9.2
40gb|AC146601.3| Mus musculus BAC clone RP23-315I4 from 14, comple... 40 9.2 
>dbj|AK060876.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A04, full
           insert sequence
          Length = 1014

 Score =  335 bits (169), Expect = 1e-88
 Identities = 358/421 (85%)
 Strand = Plus / Minus

                                                                       
Query: 176 ttcacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctct 235
           ||||||| |||||||| |||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 756 ttcacttcaggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctct 697

                                                                       
Query: 236 ttacagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccaggga 295
           | |||||||| ||||| ||    || |||||||| |||||||||||   |||||||||||
Sbjct: 696 tgacagcagctgcatcatcattcttgtatctcacagtccatccatgttcaaccccaggga 637

                                                                       
Query: 296 agatcttgacaaagtgagcaatccctgagttagatgatagaacctgctcgaactccttga 355
           ||||||||||||||||  |||||||||| || || || |||||||||||||||| ||| |
Sbjct: 636 agatcttgacaaagtggccaatccctgactttgaagaaagaacctgctcgaactgcttca 577

                                                                       
Query: 356 ccaattctggtggggacatcacatcagtttcagctccaagtacagcgatggggcatttca 415
           ||| |||||||||||||||   |||| ||||||||||||||| ||| || |||||||| |
Sbjct: 576 ccacttctggtggggacatacgatcaatttcagctccaagtatagcaattgggcatttga 517

                                                                       
Query: 416 cctcttttatatcatcgacagtaacaaaagaaggatgcgacataacggctgtctggatct 475
           ||||||| |||||||| ||||| |||||||| || ||  |||| || || | ||||||||
Sbjct: 516 cctctttcatatcatcaacagtcacaaaagaggggtgacacatcacagcagcctggatct 457

                                                                       
Query: 476 cattagctttcgctaactctgcgactacctttgcaccccaacaataacctgcagccccaa 535
           ||| ||||||| |||||||| | || |||||||||||||| ||||||||| |||||||||
Sbjct: 456 catgagctttcactaactctaccaccacctttgcaccccagcaataacctacagccccaa 397

                                                                       
Query: 536 cactagacgctccttgttcctttagagcagcgataacaggctttgcctcttcaaatgctt 595
            ||||||| ||||||  ||||| ||||| || ||||  || || ||||||||||||||||
Sbjct: 396 tactagacactcctttctccttcagagcggcaataattggtttcgcctcttcaaatgctt 337

            
Query: 596 t 596
           |
Sbjct: 336 t 336
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>dbj|AK101551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048O15, full
           insert sequence
          Length = 1127

 Score =  323 bits (163), Expect = 4e-85
 Identities = 355/419 (84%)
 Strand = Plus / Minus

                                                                       
Query: 178 cacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctcttt 237
           ||||| |||||||| |||||||||||||||||||| | |||||| |||||||||||||| 
Sbjct: 938 cacttcaggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctcttg 879

                                                                       
Query: 238 acagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccagggaag 297
           |||||||| ||||| ||    || |||||||| |||||||||||   |||||||||||||
Sbjct: 878 acagcagctgcatcatcattcttgtatctcacagtccatccatgttcaaccccagggaag 819

                                                                       
Query: 298 atcttgacaaagtgagcaatccctgagttagatgatagaacctgctcgaactccttgacc 357
           ||||||||||||||  |||||||||| || || || |||||||||||||||| |||  ||
Sbjct: 818 atcttgacaaagtggccaatccctgactttgaagaaagaacctgctcgaactgcttctcc 759

                                                                       
Query: 358 aattctggtggggacatcacatcagtttcagctccaagtacagcgatggggcatttcacc 417
           | |||||||||||||||   |||| ||||||||||||||| ||| || |||||||| |||
Sbjct: 758 acttctggtggggacatacgatcaatttcagctccaagtatagcaattgggcatttgacc 699

                                                                       
Query: 418 tcttttatatcatcgacagtaacaaaagaaggatgcgacataacggctgtctggatctca 477
           ||||| |||||||| ||||| |||||||| || ||  |||| || || | ||||||||||
Sbjct: 698 tctttcatatcatcaacagtcacaaaagaggggtgacacatcacagcagcctggatctca 639

                                                                       
Query: 478 ttagctttcgctaactctgcgactacctttgcaccccaacaataacctgcagccccaaca 537
           | ||||||| |||||||| | || |||||||||||||| ||||||||| ||||||||| |
Sbjct: 638 tgagctttcactaactctaccaccacctttgcaccccagcaataacctacagccccaata 579

                                                                      
Query: 538 ctagacgctccttgttcctttagagcagcgataacaggctttgcctcttcaaatgcttt 596
           |||||| ||||||  ||||| ||||| || ||||  || || |||||||||||||||||
Sbjct: 578 ctagacactcctttctccttcagagcggcaataattggtttcgcctcttcaaatgcttt 520
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>dbj|AK073623.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048N15, full
           insert sequence
          Length = 1127

 Score =  323 bits (163), Expect = 4e-85
 Identities = 355/419 (84%)
 Strand = Plus / Minus

                                                                       
Query: 178 cacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctcttt 237
           ||||| |||||||| |||||||||||||||||||| | |||||| |||||||||||||| 
Sbjct: 938 cacttcaggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctcttg 879

                                                                       
Query: 238 acagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccagggaag 297
           |||||||| ||||| ||    || |||||||| |||||||||||   |||||||||||||
Sbjct: 878 acagcagctgcatcatcattcttgtatctcacagtccatccatgttcaaccccagggaag 819

                                                                       
Query: 298 atcttgacaaagtgagcaatccctgagttagatgatagaacctgctcgaactccttgacc 357
           ||||||||||||||  |||||||||| || || || |||||||||||||||| |||  ||
Sbjct: 818 atcttgacaaagtggccaatccctgactttgaagaaagaacctgctcgaactgcttctcc 759

                                                                       
Query: 358 aattctggtggggacatcacatcagtttcagctccaagtacagcgatggggcatttcacc 417
           | |||||||||||||||   |||| ||||||||||||||| ||| || |||||||| |||
Sbjct: 758 acttctggtggggacatacgatcaatttcagctccaagtatagcaattgggcatttgacc 699

                                                                       
Query: 418 tcttttatatcatcgacagtaacaaaagaaggatgcgacataacggctgtctggatctca 477
           ||||| |||||||| ||||| |||||||| || ||  |||| || || | ||||||||||
Sbjct: 698 tctttcatatcatcaacagtcacaaaagaggggtgacacatcacagcagcctggatctca 639

                                                                       
Query: 478 ttagctttcgctaactctgcgactacctttgcaccccaacaataacctgcagccccaaca 537
           | ||||||| |||||||| | || |||||||||||||| ||||||||| ||||||||| |
Sbjct: 638 tgagctttcactaactctaccaccacctttgcaccccagcaataacctacagccccaata 579

                                                                      
Query: 538 ctagacgctccttgttcctttagagcagcgataacaggctttgcctcttcaaatgcttt 596
           |||||| ||||||  ||||| ||||| || ||||  || || |||||||||||||||||
Sbjct: 578 ctagacactcctttctccttcagagcggcaataattggtttcgcctcttcaaatgcttt 520
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>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01,
             complete sequence
          Length = 146303

 Score =  149 bits (75), Expect = 1e-32
 Identities = 126/143 (88%)
 Strand = Plus / Minus

                                                                         
Query: 176   ttcacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctct 235
             |||||||||||||||| ||||||||||| |||||||||| |||||| |||||||||||||
Sbjct: 66628 ttcacttgaggttcttattaaaccagtcgatcatgtctgccagggcttcctcggcgctct 66569

                                                                         
Query: 236   ttacagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccaggga 295
             | |||||||| ||||| ||  | || ||||| ||||||||||||||    ||||||||||
Sbjct: 66568 tgacagcagcggcatcgtcatccttgtatcttacggtccatccatgctcgaccccaggga 66509

                                    
Query: 296   agatcttgacaaagtgagcaatc 318
             ||||||||||||||||| |||||
Sbjct: 66508 agatcttgacaaagtgaccaatc 66486



 Score =  135 bits (68), Expect = 2e-28
 Identities = 119/136 (87%)
 Strand = Plus / Minus

                                                                         
Query: 176   ttcacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctct 235
             ||||||| |||||||| |||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 73161 ttcacttcaggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctct 73102

                                                                         
Query: 236   ttacagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccaggga 295
             | |||||||| ||||| ||    || |||||||| |||||||||||   |||||||||||
Sbjct: 73101 tgacagcagctgcatcatcattcttgtatctcacagtccatccatgttcaaccccaggga 73042

                             
Query: 296   agatcttgacaaagtg 311
             ||||||||||||||||
Sbjct: 73041 agatcttgacaaagtg 73026



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                         
Query: 334   agaacctgctcgaactccttgaccaattctggtggggacatcacatcagtttcagctcca 393
             |||||||||||||||| ||| |||| |||||||||||||||   |||| |||||||||||
Sbjct: 72353 agaacctgctcgaactgcttcaccacttctggtggggacatacgatcaatttcagctcca 72294

                                        
Query: 394   agtacagcgatggggcatttcacctct 420
             |||| ||| || |||||||| ||||||
Sbjct: 72293 agtatagcaattgggcatttgacctct 72267



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 75/88 (85%)
 Strand = Plus / Minus

                                                                         
Query: 509   caccccaacaataacctgcagccccaacactagacgctccttgttcctttagagcagcga 568
             ||||||| ||||||||| ||||||||| ||||||| ||||||  ||||| ||||| || |
Sbjct: 71979 caccccagcaataacctacagccccaatactagacactcctttctccttcagagcggcaa 71920

                                         
Query: 569   taacaggctttgcctcttcaaatgcttt 596
             |||  || || |||||||||||||||||
Sbjct: 71919 taattggtttcgcctcttcaaatgcttt 71892



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                         
Query: 509   caccccaacaataacctgcagccccaacactagacgctccttgttcctttagagcagcga 568
             ||||||||||||||||||||||||| |    ||| ||||| |  ||||||||||| || |
Sbjct: 77323 caccccaacaataacctgcagccccgatgaaagatgctcccttctcctttagagcggcaa 77264

                                      
Query: 569   taacaggctttgcctcttcaaatgc 593
             |||| || |||||||||||||||||
Sbjct: 77263 taactggttttgcctcttcaaatgc 77239



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 100/123 (81%)
 Strand = Plus / Minus

                                                                         
Query: 196   aaccagtcaatcatgtctgtcagggcctcctcggcgctctttacagcagccgcatcttcg 255
             ||||| || |||||||||  |||||| ||||| |||||||| || ||||| ||||| |||
Sbjct: 82772 aaccaatccatcatgtcttccagggcttcctcagcgctcttgacggcagctgcatcatcg 82713

                                                                         
Query: 256   ccattatatctcacggtccatccatgagaaaccccagggaagatcttgacaaagtgagca 315
               ||| |||||||| | |||||||||    || || ||||| |||||||| |||||||||
Sbjct: 82712 tgattgtatctcacagcccatccatgctctacgccggggaaaatcttgacgaagtgagca 82653

                
Query: 316   atc 318
             |||
Sbjct: 82652 atc 82650



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 75/91 (82%)
 Strand = Plus / Minus

                                                                         
Query: 419   cttttatatcatcgacagtaacaaaagaaggatgcgacataacggctgtctggatctcat 478
             |||| |||||||| ||||| |||||||| || ||  |||| || || | |||||||||||
Sbjct: 72172 ctttcatatcatcaacagtcacaaaagaggggtgacacatcacagcagcctggatctcat 72113

                                            
Query: 479   tagctttcgctaactctgcgactacctttgc 509
              ||||||| |||||||| | || ||||||||
Sbjct: 72112 gagctttcactaactctaccaccacctttgc 72082
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  149 bits (75), Expect = 1e-32
 Identities = 126/143 (88%)
 Strand = Plus / Minus

                                                                            
Query: 176      ttcacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctct 235
                |||||||||||||||| ||||||||||| |||||||||| |||||| |||||||||||||
Sbjct: 19262553 ttcacttgaggttcttattaaaccagtcgatcatgtctgccagggcttcctcggcgctct 19262494

                                                                            
Query: 236      ttacagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccaggga 295
                | |||||||| ||||| ||  | || ||||| ||||||||||||||    ||||||||||
Sbjct: 19262493 tgacagcagcggcatcgtcatccttgtatcttacggtccatccatgctcgaccccaggga 19262434

                                       
Query: 296      agatcttgacaaagtgagcaatc 318
                ||||||||||||||||| |||||
Sbjct: 19262433 agatcttgacaaagtgaccaatc 19262411



 Score =  135 bits (68), Expect = 2e-28
 Identities = 119/136 (87%)
 Strand = Plus / Minus

                                                                            
Query: 176      ttcacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctct 235
                ||||||| |||||||| |||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 19269086 ttcacttcaggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctct 19269027

                                                                            
Query: 236      ttacagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccaggga 295
                | |||||||| ||||| ||    || |||||||| |||||||||||   |||||||||||
Sbjct: 19269026 tgacagcagctgcatcatcattcttgtatctcacagtccatccatgttcaaccccaggga 19268967

                                
Query: 296      agatcttgacaaagtg 311
                ||||||||||||||||
Sbjct: 19268966 agatcttgacaaagtg 19268951



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                            
Query: 334      agaacctgctcgaactccttgaccaattctggtggggacatcacatcagtttcagctcca 393
                |||||||||||||||| ||| |||| |||||||||||||||   |||| |||||||||||
Sbjct: 19268278 agaacctgctcgaactgcttcaccacttctggtggggacatacgatcaatttcagctcca 19268219

                                           
Query: 394      agtacagcgatggggcatttcacctct 420
                |||| ||| || |||||||| ||||||
Sbjct: 19268218 agtatagcaattgggcatttgacctct 19268192



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 75/88 (85%)
 Strand = Plus / Minus

                                                                            
Query: 509      caccccaacaataacctgcagccccaacactagacgctccttgttcctttagagcagcga 568
                ||||||| ||||||||| ||||||||| ||||||| ||||||  ||||| ||||| || |
Sbjct: 19267904 caccccagcaataacctacagccccaatactagacactcctttctccttcagagcggcaa 19267845

                                            
Query: 569      taacaggctttgcctcttcaaatgcttt 596
                |||  || || |||||||||||||||||
Sbjct: 19267844 taattggtttcgcctcttcaaatgcttt 19267817



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                            
Query: 509      caccccaacaataacctgcagccccaacactagacgctccttgttcctttagagcagcga 568
                ||||||||||||||||||||||||| |    ||| ||||| |  ||||||||||| || |
Sbjct: 19273248 caccccaacaataacctgcagccccgatgaaagatgctcccttctcctttagagcggcaa 19273189

                                         
Query: 569      taacaggctttgcctcttcaaatgc 593
                |||| || |||||||||||||||||
Sbjct: 19273188 taactggttttgcctcttcaaatgc 19273164



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 100/123 (81%)
 Strand = Plus / Minus

                                                                            
Query: 196      aaccagtcaatcatgtctgtcagggcctcctcggcgctctttacagcagccgcatcttcg 255
                ||||| || |||||||||  |||||| ||||| |||||||| || ||||| ||||| |||
Sbjct: 19278697 aaccaatccatcatgtcttccagggcttcctcagcgctcttgacggcagctgcatcatcg 19278638

                                                                            
Query: 256      ccattatatctcacggtccatccatgagaaaccccagggaagatcttgacaaagtgagca 315
                  ||| |||||||| | |||||||||    || || ||||| |||||||| |||||||||
Sbjct: 19278637 tgattgtatctcacagcccatccatgctctacgccggggaaaatcttgacgaagtgagca 19278578

                   
Query: 316      atc 318
                |||
Sbjct: 19278577 atc 19278575



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 75/91 (82%)
 Strand = Plus / Minus

                                                                            
Query: 419      cttttatatcatcgacagtaacaaaagaaggatgcgacataacggctgtctggatctcat 478
                |||| |||||||| ||||| |||||||| || ||  |||| || || | |||||||||||
Sbjct: 19268097 ctttcatatcatcaacagtcacaaaagaggggtgacacatcacagcagcctggatctcat 19268038

                                               
Query: 479      tagctttcgctaactctgcgactacctttgc 509
                 ||||||| |||||||| | || ||||||||
Sbjct: 19268037 gagctttcactaactctaccaccacctttgc 19268007
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>gb|AY104092.1| Zea mays PCO081688 mRNA sequence
          Length = 1359

 Score =  137 bits (69), Expect = 5e-29
 Identities = 332/419 (79%), Gaps = 3/419 (0%)
 Strand = Plus / Minus

                                                                        
Query: 175  gttcacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctc 234
            ||||| || ||||||||||| |||||||| | |||||| |  | ||| ||||| ||||||
Sbjct: 1045 gttcattttaggttcttgttgaaccagtcgagcatgtccgcaaaggcttcctcagcgctc 986

                                                                        
Query: 235  tttacagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccaggg 294
            || || ||||| ||||| |||    | ||||||||| |||| ||||| |  || ||||||
Sbjct: 985  ttcacggcagctgcatcatcgaggctgtatctcacgctccacccatgcgccacgccaggg 926

                                                                        
Query: 295  aagatcttgacaaagtgagcaatccctgagttagatgatagaacctgctcgaactccttg 354
            |||| |||||| |||||| ||| |||||||||    || ||  | |||||||| | ||||
Sbjct: 925  aagaccttgacgaagtgaccaacccctgagttcacagaaagggcttgctcgaattgcttg 866

                                                                        
Query: 355  accaattctggtggggacatcacatcagtttcagctccaagtacagcgatggggcatttc 414
            || || |||||||||||| |||||||  | ||||||||||||| || ||| | |||||| 
Sbjct: 865  actaactctggtggggacctcacatccatctcagctccaagtatagagattgagcatttg 806

                                                                        
Query: 415  acctcttttatatcatcgacagtaacaaaagaaggatgcgacataacggctgtct---gg 471
            |||||||| ||||| | ||| |||||||||||||| ||| |||  || || | ||   ||
Sbjct: 805  acctctttgatatcgtagacggtaacaaaagaagggtgcaacagtacagcagccttgagg 746

                                                                        
Query: 472  atctcattagctttcgctaactctgcgactacctttgcaccccaacaataacctgcagcc 531
            | |||||| ||||| || |||||  | || |||||||||||||| ||||| |||||||| 
Sbjct: 745  agctcatttgcttttgccaactccacaacgacctttgcaccccagcaataccctgcagct 686

                                                                       
Query: 532  ccaacactagacgctccttgttcctttagagcagcgataacaggctttgcctcttcaaa 590
            |||||   |||| |||| |  ||||||||||| || ||||| || ||||||||||||||
Sbjct: 685  ccaacggcagacactcccttctcctttagagccgcaataactggttttgcctcttcaaa 627
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>dbj|AK101507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044O16, full
           insert sequence
          Length = 1039

 Score =  107 bits (54), Expect = 5e-20
 Identities = 312/398 (78%)
 Strand = Plus / Minus

                                                                       
Query: 196 aaccagtcaatcatgtctgtcagggcctcctcggcgctctttacagcagccgcatcttcg 255
           ||||| || |||||||||  |||||| ||||| |||||||| || ||||| ||||| |||
Sbjct: 747 aaccaatccatcatgtcttccagggcttcctcagcgctcttgacggcagctgcatcatcg 688

                                                                       
Query: 256 ccattatatctcacggtccatccatgagaaaccccagggaagatcttgacaaagtgagca 315
             ||| |||||||| | |||||||||    || || ||||| |||||||| |||||||||
Sbjct: 687 tgattgtatctcacagcccatccatgctctacgccggggaaaatcttgacgaagtgagca 628

                                                                       
Query: 316 atccctgagttagatgatagaacctgctcgaactccttgaccaattctggtggggacatc 375
           ||| | | |||||  || || | |||||| |||| ||| | ||  |||||||| ||| ||
Sbjct: 627 atctcggggttaggagaaaggatctgctcaaactgctttaacagctctggtggagacgtc 568

                                                                       
Query: 376 acatcagtttcagctccaagtacagcgatggggcatttcacctcttttatatcatcgaca 435
              ||| ||||||| ||||||| ||  || |||||||| || ||||| || |||||||||
Sbjct: 567 ttgtcaatttcagcaccaagtatagaaattgggcatttgacttctttgatgtcatcgaca 508

                                                                       
Query: 436 gtaacaaaagaaggatgcgacataacggctgtctggatctcattagctttcgctaactct 495
           | ||  |||||||| ||   ||  || || | |||||| ||||   ||||  ||||||| 
Sbjct: 507 gcaagtaaagaagggtgtagcaatacagcagcctggatttcatggactttgcctaactcc 448

                                                                       
Query: 496 gcgactacctttgcaccccaacaataacctgcagccccaacactagacgctccttgttcc 555
            | ||||||||||||||||||||||||||||||||||| |    ||| ||||| |  |||
Sbjct: 447 accactacctttgcaccccaacaataacctgcagccccgatgaaagatgctcccttctcc 388

                                                 
Query: 556 tttagagcagcgataacaggctttgcctcttcaaatgc 593
           |||||||| || ||||| || |||||||||||||||||
Sbjct: 387 tttagagcggcaataactggttttgcctcttcaaatgc 350
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>gb|BT016986.1| Zea mays clone EK07D2304D04.c mRNA sequence
          Length = 1139

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 195/246 (79%)
 Strand = Plus / Minus

                                                                       
Query: 175 gttcacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctc 234
           ||||| || ||||||||||| |||||||| | |||||| |  | ||| ||||| ||||||
Sbjct: 914 gttcattttaggttcttgttgaaccagtcgagcatgtccgcaaaggcttcctcagcgctc 855

                                                                       
Query: 235 tttacagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccaggg 294
           || || ||||| ||||| |||    | ||||||||| |||| ||||| |  || ||||||
Sbjct: 854 ttcacggcagctgcatcatcgaggctgtatctcacgctccacccatgcgccacgccaggg 795

                                                                       
Query: 295 aagatcttgacaaagtgagcaatccctgagttagatgatagaacctgctcgaactccttg 354
           |||| |||||| |||||| ||| |||||||||    || ||  | |||||||| | ||||
Sbjct: 794 aagaccttgacgaagtgaccaacccctgagttcacagaaagggcttgctcgaattgcttg 735

                                                                       
Query: 355 accaattctggtggggacatcacatcagtttcagctccaagtacagcgatggggcatttc 414
           || || |||||||||||| |||||||  | ||||||||||||| || ||| | |||||| 
Sbjct: 734 actaactctggtggggacctcacatccatctcagctccaagtatagagattgagcatttg 675

                 
Query: 415 acctct 420
           ||||||
Sbjct: 674 acctct 669



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                       
Query: 502 acctttgcaccccaacaataacctgcagccccaacactagacgctccttgttcctttaga 561
           |||||||||||||| ||||| |||||||| |||||   |||| |||| |  |||||||||
Sbjct: 596 acctttgcaccccagcaataccctgcagctccaacggcagacactcccttctcctttaga 537

                                        
Query: 562 gcagcgataacaggctttgcctcttcaaa 590
           || |||||||| || ||||||||||||||
Sbjct: 536 gccgcgataactggttttgcctcttcaaa 508
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>gb|U58749.1| Caenorhabditis elegans cosmid B0496, complete sequence
          Length = 40466

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 578  ttgcctcttcaaatgcttttccc 600
            |||||||||||||||||||||||
Sbjct: 8021 ttgcctcttcaaatgcttttccc 8043
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>emb|Y10983.1|GMP450CP9 Glycine max mRNA for cytochrome P450-like protein, clone CP9
          Length = 1818

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 178  cacttgaggttcttgttaaacca 200
            |||||||||||||||||||||||
Sbjct: 1551 cacttgaggttcttgttaaacca 1573
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>gb|AC139344.17| Medicago truncatula clone mth2-34b22, complete sequence
          Length = 129728

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 190   ttgttaaaccagtcaatcatgt 211
             ||||||||||||||||||||||
Sbjct: 89158 ttgttaaaccagtcaatcatgt 89179
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>gb|AC126695.4| Mus musculus BAC clone RP23-313D2 from 18, complete sequence
          Length = 171427

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 567    gataacaggctttgcctcttc 587
              |||||||||||||||||||||
Sbjct: 101192 gataacaggctttgcctcttc 101212
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>gb|AC106772.3| Homo sapiens chromosome 5 clone RP11-310P5, complete sequence
          Length = 161984

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 577   tttgcctcttcaaatgctttt 597
             |||||||||||||||||||||
Sbjct: 43913 tttgcctcttcaaatgctttt 43893
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>ref|XM_956627.1| Neurospora crassa OR74A hypothetical protein (NCU01108.1) partial
           mRNA
          Length = 384

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 224 cctcggcgctctttacagcagccgcatc 251
           ||||||||||||  ||||||||||||||
Sbjct: 277 cctcggcgctctcaacagcagccgcatc 250
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>ref|XM_326600.1| Neurospora crassa OR74A hypothetical protein (NCU01108.1) partial
           mRNA
          Length = 384

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 224 cctcggcgctctttacagcagccgcatc 251
           ||||||||||||  ||||||||||||||
Sbjct: 277 cctcggcgctctcaacagcagccgcatc 250
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>gb|AC134869.4| Mus musculus BAC clone RP23-137C6 from chromosome 13, complete sequence
          Length = 213473

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 522    acctgcagccccaacactag 541
              ||||||||||||||||||||
Sbjct: 195431 acctgcagccccaacactag 195450
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>gb|AC113125.8| Mus musculus chromosome 14, clone RP23-350B18, complete sequence
          Length = 220629

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   aaaccagtcaatcatgtctg 214
             ||||||||||||||||||||
Sbjct: 37371 aaaccagtcaatcatgtctg 37390
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>gb|AC122279.3| Mus musculus BAC clone RP23-237J8 from chromosome 14, complete sequence
          Length = 203640

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    aaaccagtcaatcatgtctg 214
              ||||||||||||||||||||
Sbjct: 113503 aaaccagtcaatcatgtctg 113484
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>gb|AC125350.3| Mus musculus BAC clone RP23-423B11 from chromosome 13, complete sequence
          Length = 205567

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 522    acctgcagccccaacactag 541
              ||||||||||||||||||||
Sbjct: 199924 acctgcagccccaacactag 199905
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>emb|AL603755.4| Human DNA sequence from clone RP11-136G2 on chromosome 6, complete
             sequence
          Length = 167565

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 520   taacctgcagccccaacact 539
             ||||||||||||||||||||
Sbjct: 98601 taacctgcagccccaacact 98582
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>emb|AL356672.9| Human DNA sequence from clone RP11-452D24 on chromosome 6, complete
              sequence
          Length = 166517

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 520    taacctgcagccccaacact 539
              ||||||||||||||||||||
Sbjct: 109097 taacctgcagccccaacact 109116
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>emb|AL009183.10|HS892F13 Human DNA sequence from clone RP5-892F13 on chromosome 1p36.2-36.3
             Contains the TNFRSF9 gene for tumor necrosis factor
             receptor superfamily member 9, complete sequence
          Length = 65848

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 440   caaaagaaggatgcgacata 459
             ||||||||||||||||||||
Sbjct: 12517 caaaagaaggatgcgacata 12498
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>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces
              hansenii
          Length = 2037969

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 435    agtaacaaaagaaggatgcgacat 458
              ||||||||| ||||||||||||||
Sbjct: 387543 agtaacaaatgaaggatgcgacat 387566
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>gb|AC164166.2| Mus musculus BAC clone RP23-88C18 from chromosome 16, complete sequence
          Length = 140552

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 222    ctcctcggcgctctttacagcagc 245
              ||||||||||||||||||| ||||
Sbjct: 138617 ctcctcggcgctctttacaacagc 138594
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>emb|AL670008.1|NCB13O8 Neurospora crassa DNA linkage group V BAC contig B13O8
          Length = 80765

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 224   cctcggcgctctttacagcagccgcatc 251
             ||||||||||||  ||||||||||||||
Sbjct: 13956 cctcggcgctctcaacagcagccgcatc 13929
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>gb|AE014180.1| Mus musculus piebald deletion region section 8 of 11 of the complete
             sequence
          Length = 400029

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   aaaccagtcaatcatgtctg 214
             ||||||||||||||||||||
Sbjct: 29399 aaaccagtcaatcatgtctg 29418
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>gb|AC090639.6| Homo sapiens chromosome 11, clone RP11-1114G3, complete sequence
          Length = 139604

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 412   ttcacctcttttatatcatc 431
             ||||||||||||||||||||
Sbjct: 68201 ttcacctcttttatatcatc 68182
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>dbj|AK138648.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched
            library, clone:A330093B16 product:unclassifiable, full
            insert sequence
          Length = 2519

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 522  acctgcagccccaacactag 541
            ||||||||||||||||||||
Sbjct: 2309 acctgcagccccaacactag 2290
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>dbj|AK161804.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
            enriched library, clone:6030445B21 product:HESB like
            domain containing 2, full insert sequence
          Length = 2553

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 522  acctgcagccccaacactag 541
            ||||||||||||||||||||
Sbjct: 1689 acctgcagccccaacactag 1670
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>gb|AC122472.5| Mus musculus BAC clone RP24-323G20 from chromosome 10, complete
             sequence
          Length = 180612

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   ttattagttattacaaaagg 158
             ||||||||||||||||||||
Sbjct: 10445 ttattagttattacaaaagg 10464
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>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome
          Length = 1669695

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 416    cctcttttatatcatcgaca 435
              ||||||||||||||||||||
Sbjct: 577275 cctcttttatatcatcgaca 577256
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>gb|AC096664.1| Homo sapiens BAC clone RP11-240J3 from 2, complete sequence
          Length = 83996

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 176   ttcacttgaggttcttgtta 195
             ||||||||||||||||||||
Sbjct: 76162 ttcacttgaggttcttgtta 76143
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>gb|AC156272.6| Mus musculus 10 BAC RP24-244K5 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 166962

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   aaccccagggaagatcttga 304
             ||||||||||||||||||||
Sbjct: 24647 aaccccagggaagatcttga 24628
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>emb|AL928547.12| Mouse DNA sequence from clone RP23-226B16 on chromosome 2, complete
             sequence
          Length = 131255

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   gaatgacacaggcttattag 145
             ||||||||||||||||||||
Sbjct: 10016 gaatgacacaggcttattag 10035
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>emb|AL807807.11| Mouse DNA sequence from clone RP23-284L15 on chromosome 4, complete
             sequence
          Length = 171570

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 523   cctgcagccccaacactaga 542
             ||||||||||||||||||||
Sbjct: 35979 cctgcagccccaacactaga 35998
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>emb|CT030736.8| Mouse DNA sequence from clone RP23-396K21 on chromosome 16, complete
             sequence
          Length = 181320

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 222   ctcctcggcgctctttacagcagc 245
             ||||||||||||||||||| ||||
Sbjct: 29744 ctcctcggcgctctttacaacagc 29721
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>gb|AC004386.1|AC004386 Homo Sapiens Chromosome X clone bWXD691, complete sequence
          Length = 172657

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     aaacaccataacataaaccc 99
              ||||||||||||||||||||
Sbjct: 110387 aaacaccataacataaaccc 110406
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>gb|AC002418.1|AC002418 Human Chromosome X, complete sequence
          Length = 128915

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    aaacaccataacataaaccc 99
             ||||||||||||||||||||
Sbjct: 60316 aaacaccataacataaaccc 60297
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>gb|AC117208.3| Mus musculus BAC clone RP23-279D15 from 10, complete sequence
          Length = 174202

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    ttattagttattacaaaagg 158
              ||||||||||||||||||||
Sbjct: 137220 ttattagttattacaaaagg 137239
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>gb|AC146601.3| Mus musculus BAC clone RP23-315I4 from 14, complete sequence
          Length = 172271

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 195    aaaccagtcaatcatgtctg 214
              ||||||||||||||||||||
Sbjct: 150717 aaaccagtcaatcatgtctg 150736


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,369,295
Number of Sequences: 3902068
Number of extensions: 5369295
Number of successful extensions: 83652
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83518
Number of HSP's gapped (non-prelim): 125
length of query: 671
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 648
effective length of database: 17,143,297,704
effective search space: 11108856912192
effective search space used: 11108856912192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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