| Clone Name | rbags8d05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AM158977.1| Messor bouvieri mariner-like transposon, clone Mboumar-PCR-900-39 Length = 903 Score = 40.1 bits (20), Expect = 0.79 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cttatcttttccttcacctc 60 |||||||||||||||||||| Sbjct: 121 cttatcttttccttcacctc 140 Score = 40.1 bits (20), Expect = 0.79 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cttatcttttccttcacctc 60 |||||||||||||||||||| Sbjct: 88 cttatcttttccttcacctc 107
>ref|XM_824634.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.01.8430) partial mRNA Length = 2892 Score = 38.2 bits (19), Expect = 3.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 48 tttccttcacctcctcgtc 66 ||||||||||||||||||| Sbjct: 2389 tttccttcacctcctcgtc 2371
>emb|BX510935.28| Zebrafish DNA sequence from clone DKEY-207L24 in linkage group 14, complete sequence Length = 128666 Score = 38.2 bits (19), Expect = 3.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 37 gcctcttatcttttccttc 55 ||||||||||||||||||| Sbjct: 82249 gcctcttatcttttccttc 82231
>emb|CR388093.11| Zebrafish DNA sequence from clone CH211-279L9 in linkage group 2, complete sequence Length = 153673 Score = 38.2 bits (19), Expect = 3.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 48 tttccttcacctcctcgtc 66 ||||||||||||||||||| Sbjct: 128498 tttccttcacctcctcgtc 128516
>emb|BX571843.19| Zebrafish DNA sequence from clone DKEY-250K10 in linkage group 14, complete sequence Length = 137288 Score = 38.2 bits (19), Expect = 3.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 37 gcctcttatcttttccttc 55 ||||||||||||||||||| Sbjct: 53060 gcctcttatcttttccttc 53042
>emb|BX000703.15| Zebrafish DNA sequence from clone CH211-276I6 in linkage group 14, complete sequence Length = 156295 Score = 38.2 bits (19), Expect = 3.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 37 gcctcttatcttttccttc 55 ||||||||||||||||||| Sbjct: 82078 gcctcttatcttttccttc 82060
>gb|AC090284.6| Homo sapiens chromosome 11, clone RP11-348B14, complete sequence Length = 160146 Score = 38.2 bits (19), Expect = 3.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 41 cttatcttttccttcacct 59 ||||||||||||||||||| Sbjct: 121050 cttatcttttccttcacct 121032
>emb|CR386290.1| Gallus gallus finished cDNA, clone ChEST56n16 Length = 1479 Score = 38.2 bits (19), Expect = 3.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 gcagtcttacagtagtctt 31 ||||||||||||||||||| Sbjct: 883 gcagtcttacagtagtctt 901
>gb|AC017069.12| Homo sapiens BAC clone RP11-380P3 from 2, complete sequence Length = 143252 Score = 38.2 bits (19), Expect = 3.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 38 cctcttatcttttccttca 56 ||||||||||||||||||| Sbjct: 48752 cctcttatcttttccttca 48734
>dbj|AP003784.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-654C20, complete sequence Length = 153539 Score = 38.2 bits (19), Expect = 3.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 41 cttatcttttccttcacct 59 ||||||||||||||||||| Sbjct: 107123 cttatcttttccttcacct 107141 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 533,868 Number of Sequences: 3902068 Number of extensions: 533868 Number of successful extensions: 40498 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 40480 Number of HSP's gapped (non-prelim): 18 length of query: 77 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 56 effective length of database: 17,151,101,840 effective search space: 960461703040 effective search space used: 960461703040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)