ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags7o02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1PAB2_SCHPO (O14327) Polyadenylate-binding protein 2 (Poly(A)-bin... 72 1e-24
2PABP2_HUMAN (Q86U42) Polyadenylate-binding protein 2 (Poly(A)-bi... 68 3e-23
3PABP2_BOVIN (Q28165) Polyadenylate-binding protein 2 (Poly(A)-bi... 68 3e-23
4PABP2_MOUSE (Q8CCS6) Polyadenylate-binding protein 2 (Poly(A)-bi... 68 3e-23
5YQOC_CAEEL (Q09301) Putative RNA-binding protein EEED8.12 59 9e-16
6YQO4_CAEEL (Q09295) Putative RNA-binding protein EEED8.4 58 1e-15
7SGN1_YEAST (P40561) RNA-binding protein SGN1 50 8e-14
8RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif p... 38 3e-07
9RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif pro... 37 4e-07
10RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif p... 37 6e-07
11DAZL_CHICK (Q804A9) Deleted in azoospermia-like (DAZ-like protein) 43 1e-05
12NOP12_KLULA (Q6CKV6) Nucleolar protein 12 33 2e-04
13NOP12_CANGA (Q6FUS6) Nucleolar protein 12 34 2e-04
14PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g... 34 2e-04
15NOP12_ASHGO (Q75BJ7) Nucleolar protein 12 35 3e-04
16SART3_PONPY (Q5REG1) Squamous cell carcinoma antigen recognized ... 37 8e-04
17SART3_HUMAN (Q15020) Squamous cell carcinoma antigen recognized ... 36 0.001
18NOP12_YEAST (Q08208) Nucleolar protein 12 32 0.001
19SART3_MOUSE (Q9JLI8) Squamous cell carcinoma antigen recognized ... 37 0.002
20PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-bind... 40 0.005
21PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-bi... 40 0.005
22PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-bi... 40 0.005
23PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-bi... 40 0.005
24PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-bi... 40 0.005
25CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit... 32 0.010
26CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit... 32 0.010
27NOP12_SCHPO (O13741) Nucleolar protein 12 30 0.013
28SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nucl... 30 0.013
29RBM11_HUMAN (P57052) Putative RNA-binding protein 11 (RNA-bindin... 39 0.015
30IF4H_MOUSE (Q9WUK2) Eukaryotic translation initiation factor 4H ... 39 0.015
31IF4H_HUMAN (Q15056) Eukaryotic translation initiation factor 4H ... 39 0.015
32NUCL_XENLA (P20397) Nucleolin (Protein C23) 34 0.017
33ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (... 38 0.026
34ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor 35 0.029
35NCBP2_YEAST (Q08920) Nuclear cap-binding protein subunit 2 38 0.034
36DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autoso... 37 0.045
37DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autoso... 37 0.045
38DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autoso... 37 0.045
39DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autoso... 37 0.045
40HRB1_YEAST (P38922) Protein HRB1 (Protein TOM34) 37 0.077
41NOP12_YARLI (Q6C2Q7) Nucleolar protein 12 28 0.099
42NOP12_CANAL (Q5AHI7) Nucleolar protein 12 28 0.100
43RBM14_PONPY (Q5RC41) RNA-binding protein 14 (RNA-binding motif p... 36 0.10
44RBM14_HUMAN (Q96PK6) RNA-binding protein 14 (RNA-binding motif p... 36 0.10
45NUCL_CHICK (P15771) Nucleolin (Protein C23) 36 0.10
46RNP24_SCHPO (Q09100) RNA-binding protein rnp24 36 0.10
47PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic a... 36 0.13
48NUCL_MOUSE (P09405) Nucleolin (Protein C23) 36 0.13
49SCE3_SCHPO (O14369) Probable RNA-binding protein sce3 35 0.22
50RBM14_MOUSE (Q8C2Q3) RNA-binding protein 14 (RNA-binding motif p... 35 0.22
51RBM14_BOVIN (Q5EA36) RNA-binding protein 14 (RNA-binding motif p... 35 0.22
52GAR2_SCHPO (P41891) Protein gar2 30 0.27
53RBM7_HUMAN (Q9Y580) RNA-binding protein 7 (RNA-binding motif pro... 35 0.29
54ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloro... 35 0.29
55CB017_HUMAN (Q8NC44) Protein C2orf17 34 0.38
56PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-... 34 0.50
57CB017_MOUSE (Q6NS82) Protein C2orf17 homolog 34 0.50
58RBM7_BOVIN (Q3MHY8) RNA-binding protein 7 (RNA-binding motif pro... 33 0.65
59HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (... 33 0.85
60RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U... 33 0.85
61GRSF1_MOUSE (Q8C5Q4) G-rich sequence factor 1 (GRSF-1) 33 0.85
62GRSF1_HUMAN (Q12849) G-rich sequence factor 1 (GRSF-1) 33 0.85
63PPIE_SCHMA (Q26548) Peptidyl-prolyl cis-trans isomerase E (EC 5.... 33 0.85
64MRD1_SCHPO (O13620) Multiple RNA-binding domain-containing prote... 32 1.4
65NUCL_PONPY (Q5RF26) Nucleolin 32 1.4
66NCBP2_ASHGO (Q754W7) Nuclear cap-binding protein subunit 2 32 1.4
67NUCL_HUMAN (P19338) Nucleolin (Protein C23) 32 1.4
68NUCL_MACFA (Q4R4J7) Nucleolin 32 1.4
69NUCL_MESAU (P08199) Nucleolin (Protein C23) 32 1.4
70NUCL_RAT (P13383) Nucleolin (Protein C23) 32 1.4
71U2AF2_DROME (Q24562) Splicing factor U2AF 50 kDa subunit (U2 aux... 27 1.6
72GBP2_YEAST (P25555) Single-strand telomeric DNA-binding protein ... 32 1.9
73IF4B_MOUSE (Q8BGD9) Eukaryotic translation initiation factor 4B ... 32 2.5
74IF4B_HUMAN (P23588) Eukaryotic translation initiation factor 4B ... 32 2.5
75PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5.... 32 2.5
76PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5.... 32 2.5
77PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-... 32 2.5
78YNR5_YEAST (P53883) Hypothetical 45.7 kDa protein in RPS3-PSD1 i... 31 3.2
79CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit... 31 3.2
80CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit... 31 3.2
81CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit... 31 3.2
82ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, ... 31 3.2
83AKAP9_RABIT (Q28628) A-kinase anchor protein 9 (Protein kinase A... 31 3.2
84PABPX_SCHPO (Q9P6M8) mRNA export factor crp79 (Polyadenylate-bin... 31 4.2
85NSR1_YEAST (P27476) Nuclear localization sequence-binding protei... 31 4.2
86CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit... 31 4.2
87U2AF2_CAEEL (P90978) Splicing factor U2AF 65 kDa subunit (U2 aux... 26 4.3
88MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing prote... 30 5.5
89NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NO... 30 5.5
90U2AF2_CAEBR (P90727) Splicing factor U2AF 65 kDa subunit (U2 aux... 26 5.5
91PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-bi... 27 6.9
92PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-bindi... 30 7.2
93NOP3_YEAST (Q01560) Nucleolar protein 3 (Mitochondrial targeting... 30 7.2
94YHC4_YEAST (P38741) Hypothetical 80.1 kDa protein in SNF6-SPO11 ... 30 7.2
95RB97D_DROME (Q02926) Ribonucleoprotein RB97D 30 7.2
96MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing prote... 30 7.2
97U2AF2_MOUSE (P26369) Splicing factor U2AF 65 kDa subunit (U2 aux... 24 9.1
98U2AF2_HUMAN (P26368) Splicing factor U2AF 65 kDa subunit (U2 aux... 24 9.1
99NOP12_DEBHA (Q6BTS9) Nucleolar protein 12 27 9.1
100G3BP_SCHPO (O94260) Putative G3BP-like protein 30 9.4
101MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing prote... 30 9.4
102MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing prote... 30 9.4
103ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 ... 30 9.4
104NOP12_NEUCR (Q7S2L7) Nucleolar protein 12 30 9.4
105HEMO_RAT (P20059) Hemopexin precursor 30 9.4 
>PAB2_SCHPO (O14327) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (Poly(A)-binding protein II) (PABII)
          Length = 166

 Score = 71.6 bits (174), Expect(2) = 1e-24
 Identities = 38/63 (60%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
 Frame = -3

Query: 518 VTILTDKF-GQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAPKRTNVPGLKQPRG- 345
           VTIL DKF G PKGFAY+EF E   +  A+ L+ S LH R +KV PKRTNVPG+ + RG 
Sbjct: 84  VTILCDKFTGHPKGFAYIEFSEPSLVPNALLLNGSMLHERPLKVTPKRTNVPGMSRGRGR 143

Query: 344 GRG 336
           GRG
Sbjct: 144 GRG 146



 Score = 61.2 bits (147), Expect(2) = 1e-24
 Identities = 31/62 (50%), Positives = 41/62 (66%)
 Frame = -2

Query: 705 AAALREMQAKVAKEMQGGDPNATTSEAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTV 526
           AA LR MQ ++  E +           KE +D++SV+VGNVDY+ TPEE+Q HF SCG+V
Sbjct: 28  AAKLRAMQEQLDNETEA------LRNDKESIDAQSVYVGNVDYSVTPEELQSHFASCGSV 81

Query: 525 NR 520
           NR
Sbjct: 82  NR 83
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>PABP2_HUMAN (Q86U42) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (PolyA binding protein II) (PABII)
           (Polyadenylate-binding nuclear protein 1) (Nuclear
           poly(A)-binding protein 1)
          Length = 305

 Score = 67.8 bits (164), Expect(2) = 3e-23
 Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
 Frame = -3

Query: 518 VTILTDKF-GQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAPKRTNVPGLKQPRGG 342
           VTIL DKF G PKGFAY+EF + E+++ ++ L ES   GRQIKV PKRTN PG+      
Sbjct: 200 VTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTT--D 257

Query: 341 RGF 333
           RGF
Sbjct: 258 RGF 260



 Score = 60.8 bits (146), Expect(2) = 3e-23
 Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
 Frame = -2

Query: 705 AAALREMQAKVAKEMQGGDPNATTS------EAKEEMDSRSVFVGNVDYACTPEEVQQHF 544
           A  L+E+Q +V K+M    P           E K E D+RS++VGNVDY  T EE++ HF
Sbjct: 132 AEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHF 191

Query: 543 NSCGTVNR 520
           + CG+VNR
Sbjct: 192 HGCGSVNR 199
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>PABP2_BOVIN (Q28165) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (PolyA-binding protein II) (PABII)
           (Polyadenylate-binding nuclear protein 1) (Nuclear
           poly(A)-binding protein 1)
          Length = 305

 Score = 67.8 bits (164), Expect(2) = 3e-23
 Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
 Frame = -3

Query: 518 VTILTDKF-GQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAPKRTNVPGLKQPRGG 342
           VTIL DKF G PKGFAY+EF + E+++ ++ L ES   GRQIKV PKRTN PG+      
Sbjct: 200 VTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTT--D 257

Query: 341 RGF 333
           RGF
Sbjct: 258 RGF 260



 Score = 60.8 bits (146), Expect(2) = 3e-23
 Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
 Frame = -2

Query: 705 AAALREMQAKVAKEMQGGDPNATTS------EAKEEMDSRSVFVGNVDYACTPEEVQQHF 544
           A  L+E+Q +V K+M    P           E K E D+RS++VGNVDY  T EE++ HF
Sbjct: 132 AEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHF 191

Query: 543 NSCGTVNR 520
           + CG+VNR
Sbjct: 192 HGCGSVNR 199
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>PABP2_MOUSE (Q8CCS6) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (PolyA binding protein II) (PABII)
           (Polyadenylate-binding nuclear protein 1) (Nuclear
           poly(A)-binding protein 1)
          Length = 301

 Score = 67.8 bits (164), Expect(2) = 3e-23
 Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
 Frame = -3

Query: 518 VTILTDKF-GQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAPKRTNVPGLKQPRGG 342
           VTIL DKF G PKGFAY+EF + E+++ ++ L ES   GRQIKV PKRTN PG+      
Sbjct: 196 VTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTT--D 253

Query: 341 RGF 333
           RGF
Sbjct: 254 RGF 256



 Score = 60.8 bits (146), Expect(2) = 3e-23
 Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
 Frame = -2

Query: 705 AAALREMQAKVAKEMQGGDPNATTS------EAKEEMDSRSVFVGNVDYACTPEEVQQHF 544
           A  L+E+Q +V K+M    P           E K E D+RS++VGNVDY  T EE++ HF
Sbjct: 128 AEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYVGNVDYGATAEELEAHF 187

Query: 543 NSCGTVNR 520
           + CG+VNR
Sbjct: 188 HGCGSVNR 195
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>YQOC_CAEEL (Q09301) Putative RNA-binding protein EEED8.12|
          Length = 197

 Score = 58.5 bits (140), Expect(2) = 9e-16
 Identities = 26/66 (39%), Positives = 43/66 (65%)
 Frame = -2

Query: 705 AAALREMQAKVAKEMQGGDPNATTSEAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTV 526
           +A L ++Q K+AK ++       T E ++ +D++SVF+GNVD+  T EEV++HF  CG +
Sbjct: 28  SAILEQIQNKMAKNLESAAYVPPTEEEQKAIDAKSVFIGNVDFNSTIEEVEEHFKGCGHI 87

Query: 525 NRSDYP 508
            R+  P
Sbjct: 88  VRTTIP 93



 Score = 44.7 bits (104), Expect(2) = 9e-16
 Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
 Frame = -3

Query: 515 TILTDKFGQP-KGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAPKRTNVPGL 360
           TI  DKF +  K FAY+EF ++ +I+ A+ ++ S    R I V  KRTN+PG+
Sbjct: 91  TIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPIVVTAKRTNIPGM 143
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>YQO4_CAEEL (Q09295) Putative RNA-binding protein EEED8.4|
          Length = 237

 Score = 57.8 bits (138), Expect(2) = 1e-15
 Identities = 24/66 (36%), Positives = 44/66 (66%)
 Frame = -2

Query: 705 AAALREMQAKVAKEMQGGDPNATTSEAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTV 526
           +A L+++Q K+AK ++       T E ++ +D++SVF+GNVD+  T EE+++HF  CG +
Sbjct: 68  SAILQQIQNKMAKHLESAAYVPPTEEEQKAIDAKSVFIGNVDFNSTIEEIEEHFKGCGQI 127

Query: 525 NRSDYP 508
            ++  P
Sbjct: 128 VKTTIP 133



 Score = 45.1 bits (105), Expect(2) = 1e-15
 Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = -3

Query: 521 EVTILTDKFGQP-KGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAPKRTNVPGL 360
           + TI  DKF +  K FAY+EF ++ +I+ A+ ++ S    R I V  KRTN+PG+
Sbjct: 129 KTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPIVVTAKRTNIPGM 183
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>SGN1_YEAST (P40561) RNA-binding protein SGN1|
          Length = 250

 Score = 49.7 bits (117), Expect(2) = 8e-14
 Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
 Frame = -3

Query: 518 VTILTDK-FGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAPKRTNVPGLKQ 354
           +T+L D+  G PKG+ Y+EF      ++A++L+  EL G++I V+ KRTN+PG  +
Sbjct: 93  ITLLYDRNTGTPKGYGYIEFESPAYREKALQLNGGELKGKKIAVSRKRTNIPGFNR 148



 Score = 47.0 bits (110), Expect(2) = 8e-14
 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
 Frame = -2

Query: 690 EMQAKVAKEMQGGDPNATTSEAKEEM-------DSRSVFVGNVDYACTPEEVQQHFNSCG 532
           E+   V K    G P  +   +KEE        DSRS+FVGN+    TPE+++ HF  CG
Sbjct: 29  ELDELVGKLSIEGTPQVSQKLSKEEKHAHQLEADSRSIFVGNITPDVTPEQIEDHFKDCG 88

Query: 531 TVNR 520
            + R
Sbjct: 89  QIKR 92
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>RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif protein 34)|
          Length = 375

 Score = 37.7 bits (86), Expect(2) = 3e-07
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = -2

Query: 705 AAALREMQAKVAKEMQGGDPNATTSEAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTV 526
           +AA + +Q   A+  +G       +      D RSVFVGN+ Y      +++HF  CG++
Sbjct: 258 SAAAKALQRNGAQIAEGFRIRVDLASETASRDKRSVFVGNLPYKIEDSALEEHFLDCGSI 317



 Score = 36.6 bits (83), Expect(2) = 3e-07
 Identities = 20/47 (42%), Positives = 29/47 (61%)
 Frame = -3

Query: 494 GQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAPKRTNVPGLKQ 354
           G  +GF YV F   +A+  A+KL+ SEL GR+++V  +  N   LKQ
Sbjct: 329 GVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRVM-RSVNKEKLKQ 374
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>RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif protein 34)|
          Length = 428

 Score = 37.4 bits (85), Expect(2) = 4e-07
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = -2

Query: 702 AALREMQAKVAKEMQGGDPNATTSEAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTV 526
           AA + +Q   A+  +G       +      D RSVFVGN+ Y      +++HF  CG++
Sbjct: 253 AAAKALQRNGAQIAEGFRIRVDLASETASRDKRSVFVGNLPYRVDESALEEHFLDCGSI 311



 Score = 36.6 bits (83), Expect(2) = 4e-07
 Identities = 20/47 (42%), Positives = 29/47 (61%)
 Frame = -3

Query: 494 GQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAPKRTNVPGLKQ 354
           G  +GF YV F   +A+  A+KL+ SEL GR+++V  +  N   LKQ
Sbjct: 323 GVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRVM-RSVNKEKLKQ 368
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>RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif protein 34)|
          Length = 430

 Score = 37.4 bits (85), Expect(2) = 6e-07
 Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
 Frame = -3

Query: 518 VTILTDKF-GQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKV 390
           V I+ DK  G  KGF YV F   +++  A+KL+ SEL GR+++V
Sbjct: 316 VRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV 359



 Score = 35.8 bits (81), Expect(2) = 6e-07
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = -2

Query: 705 AAALREMQAKVAKEMQGGDPNATTSEAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTV 526
           +AA + ++   A+   G       +      D RSVFVGN+ Y      +++HF  CG++
Sbjct: 254 SAATQALKRNGAQIADGFRIRVDLASETSSRDKRSVFVGNLPYKVEESAIEKHFLDCGSI 313
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>DAZL_CHICK (Q804A9) Deleted in azoospermia-like (DAZ-like protein)|
          Length = 289

 Score = 43.1 bits (100), Expect(2) = 1e-05
 Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
 Frame = -3

Query: 521 EVTILTDKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAP---KRTNVPGLKQP 351
           EV I+TD+ G  KG+ +V F++   +Q+ V+ S+  +HG+++K+ P   K+ N+    QP
Sbjct: 64  EVKIITDRTGVSKGYGFVSFLDNVDVQKIVE-SQISVHGKRLKLGPAIRKQQNLCSYMQP 122

Query: 350 R 348
           R
Sbjct: 123 R 123



 Score = 25.8 bits (55), Expect(2) = 1e-05
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 603 SVFVGNVDYACTPEEVQQHFNSCGTV 526
           +VFVG +D      E++ +F   GTV
Sbjct: 37  TVFVGGIDIRMNEAEIRSYFEQYGTV 62
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>NOP12_KLULA (Q6CKV6) Nucleolar protein 12|
          Length = 524

 Score = 33.1 bits (74), Expect(2) = 2e-04
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -2

Query: 606 RSVFVGNVDYACTPEEVQQHFNSCGTV 526
           RSVFVGN+D+    E + +HF  CG +
Sbjct: 359 RSVFVGNLDFEEVEESLWKHFEPCGDI 385



 Score = 31.6 bits (70), Expect(2) = 2e-04
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -3

Query: 518 VTILTD-KFGQPKGFAYVEFVEAEAIQEAVKLSESELH 408
           V I+ D K    KGFAYV+F + +++ +A+ L E ++H
Sbjct: 388 VRIIRDSKTNMGKGFAYVQFKDFQSVSKALLLHEKKIH 425
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>NOP12_CANGA (Q6FUS6) Nucleolar protein 12|
          Length = 396

 Score = 34.3 bits (77), Expect(2) = 2e-04
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = -2

Query: 606 RSVFVGNVDYACTPEEVQQHFNSCGTV 526
           RSVFVGN+D+    E + +HF +CG++
Sbjct: 228 RSVFVGNLDFEEDEESLWKHFGACGSI 254



 Score = 30.4 bits (67), Expect(2) = 2e-04
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = -3

Query: 518 VTILTD-KFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAPKRTNVPGLKQPR 348
           V I+ D K    KGFAYV+F E +++ +A+ L+E  +  +   +  ++  V   K  R
Sbjct: 257 VRIVRDPKTNMGKGFAYVQFNELQSVSKALLLNEKPMISQNEHLKKRKLRVTRCKNIR 314
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>PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g36660|
           (Poly(A)-binding protein At2g36660) (PABP)
          Length = 609

 Score = 34.3 bits (77), Expect(2) = 2e-04
 Identities = 12/26 (46%), Positives = 21/26 (80%)
 Frame = -2

Query: 603 SVFVGNVDYACTPEEVQQHFNSCGTV 526
           +++V NV+ A T EE+++HF+ CGT+
Sbjct: 305 NIYVKNVNVAVTEEELRKHFSQCGTI 330



 Score = 30.0 bits (66), Expect(2) = 2e-04
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -3

Query: 524 TEVTILTDKFGQPKGFAYVEFVEAEAIQEAVKLSESEL-HGRQIKVA 387
           T   ++ D+ G+ KGF +V F   E   +AVK    ++ HG+ + VA
Sbjct: 331 TSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVA 377
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>NOP12_ASHGO (Q75BJ7) Nucleolar protein 12|
          Length = 426

 Score = 34.7 bits (78), Expect(2) = 3e-04
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = -2

Query: 606 RSVFVGNVDYACTPEEVQQHFNSCGTV 526
           RSVFVGN+D+  + E + +HF SCG +
Sbjct: 259 RSVFVGNLDFEESEESLWKHFMSCGPI 285



 Score = 29.3 bits (64), Expect(2) = 3e-04
 Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
 Frame = -3

Query: 530 PSTEVTILTD-KFGQPKGFAYVEFVEAEAIQEAVKLSESEL---HGRQIKV 390
           P   V I+ D K    KGFAYV+F +  ++ +A+ L++ ++    GR+++V
Sbjct: 284 PIEYVRIVRDPKTNVGKGFAYVQFADLVSVNKALLLNDKKMAVGKGRKLRV 334
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>SART3_PONPY (Q5REG1) Squamous cell carcinoma antigen recognized by T-cells 3|
            (SART-3)
          Length = 981

 Score = 36.6 bits (83), Expect(2) = 8e-04
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
 Frame = -3

Query: 521  EVTILTDKFGQPKGFAYVEFV-EAEAIQEAVKLSESELHGRQIKVA---PKRTNVPGLKQ 354
            ++ ++T++ G+PKG AYVE+  E++A Q  +K+    +    IKVA   P +  VP   +
Sbjct: 847  DLRLVTNRAGKPKGLAYVEYENESQASQAVMKMDGMTIKENVIKVAISNPPQRKVPEKPE 906

Query: 353  PRGGRG 336
             R   G
Sbjct: 907  TRKAPG 912



 Score = 31.2 bits (69), Expect = 3.2
 Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
 Frame = -3

Query: 575 HALQKKCSSILILAEPSTEVTILTDKF---GQPKGFAYVEFVEAEAIQEAVKLSESELHG 405
           +++Q+  + +  L E   EV  +   F   G  +G+ YVEF E ++  +A+++    + G
Sbjct: 731 YSMQEPDAKLRPLFEACGEVVQIRPIFSNRGDFRGYRYVEFKEEKSALQALEMDRKSVEG 790

Query: 404 RQIKVAP 384
           R + V+P
Sbjct: 791 RPMFVSP 797



 Score = 25.8 bits (55), Expect(2) = 8e-04
 Identities = 9/42 (21%), Positives = 22/42 (52%)
 Frame = -2

Query: 651 DPNATTSEAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTV 526
           +P+         ++   +F+  + ++CT EE+++   + GTV
Sbjct: 804 NPDFKVFRYSTSLEKHKLFISGLPFSCTKEELEEICKAHGTV 845
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>SART3_HUMAN (Q15020) Squamous cell carcinoma antigen recognized by T-cells 3|
            (SART-3) (hSART-3) (Tat-interacting protein of 110 kDa)
            (Tip110)
          Length = 963

 Score = 36.2 bits (82), Expect(2) = 0.001
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
 Frame = -3

Query: 521  EVTILTDKFGQPKGFAYVEFV-EAEAIQEAVKLSESELHGRQIKVA---PKRTNVPGLKQ 354
            ++ ++T++ G+PKG AYVE+  E++A Q  +K+    +    IKVA   P +  VP   +
Sbjct: 829  DLRLVTNRAGKPKGLAYVEYENESQASQAVMKMDGMTIKENIIKVAISNPPQRKVPEKPE 888

Query: 353  PRGGRG 336
             R   G
Sbjct: 889  TRKAPG 894



 Score = 31.6 bits (70), Expect = 2.5
 Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
 Frame = -3

Query: 575 HALQKKCSSILILAEPSTEVTILTDKF---GQPKGFAYVEFVEAEAIQEAVKLSESELHG 405
           +++Q+  + +  L E   EV  +   F   G  +G+ YVEF E ++  +A+++    + G
Sbjct: 713 YSMQEPDTKLRPLFEACGEVVQIRPIFSNRGDFRGYCYVEFKEEKSALQALEMDRKSVEG 772

Query: 404 RQIKVAP 384
           R + V+P
Sbjct: 773 RPMFVSP 779



 Score = 25.8 bits (55), Expect(2) = 0.001
 Identities = 9/42 (21%), Positives = 22/42 (52%)
 Frame = -2

Query: 651 DPNATTSEAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTV 526
           +P+         ++   +F+  + ++CT EE+++   + GTV
Sbjct: 786 NPDFKVFRYSTSLEKHKLFISGLPFSCTKEELEEICKAHGTV 827
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>NOP12_YEAST (Q08208) Nucleolar protein 12|
          Length = 459

 Score = 32.3 bits (72), Expect(2) = 0.001
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -2

Query: 606 RSVFVGNVDYACTPEEVQQHFNSCGTV 526
           RS+FVGN+D+    E + +HF  CG +
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDI 305



 Score = 29.3 bits (64), Expect(2) = 0.001
 Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = -3

Query: 518 VTILTD-KFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQ 399
           V I+ D K    KGFAYV+F + +++ +A+ L+E  +  ++
Sbjct: 308 VRIIRDSKTNMGKGFAYVQFKDLQSVNKALLLNEKPMKSQK 348
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>SART3_MOUSE (Q9JLI8) Squamous cell carcinoma antigen recognized by T-cells 3|
            (SART-3) (mSART-3) (Tumor-rejection antigen SART3)
          Length = 962

 Score = 36.6 bits (83), Expect(2) = 0.002
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
 Frame = -3

Query: 521  EVTILTDKFGQPKGFAYVEFV-EAEAIQEAVKLSESELHGRQIKVA---PKRTNVPGLKQ 354
            ++ ++T++ G+PKG AYVE+  E++A Q  +K+    +    IKVA   P +  VP   +
Sbjct: 829  DLRLVTNRAGKPKGLAYVEYENESQASQAVMKMDGMTIRENVIKVAISNPPQRKVPEKPE 888

Query: 353  PRGGRG 336
             R   G
Sbjct: 889  VRTAPG 894



 Score = 32.3 bits (72), Expect = 1.4
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = -3

Query: 494 GQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAP 384
           G  +G+ YVEF E ++ Q+A++L    + GR + V+P
Sbjct: 743 GDFRGYCYVEFGEEKSAQQALELDRKIVEGRPMFVSP 779



 Score = 24.6 bits (52), Expect(2) = 0.002
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = -2

Query: 615 MDSRSVFVGNVDYACTPEEVQQHFNSCGTV 526
           ++   +F+  + ++CT EE++    + GTV
Sbjct: 798 LEKHKLFISGLPFSCTKEELEDICKAHGTV 827
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>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = -3

Query: 530 PSTEVTILTDKFGQPKGFAYVEFVEAEAIQEAV-KLSESELHGRQIKVAPKRTNV 369
           P+  V ++TD+ G+ KGF +V F   E  Q+AV +++  EL+G+QI V   +  V
Sbjct: 216 PALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
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>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = -3

Query: 530 PSTEVTILTDKFGQPKGFAYVEFVEAEAIQEAV-KLSESELHGRQIKVAPKRTNV 369
           P+  V ++TD+ G+ KGF +V F   E  Q+AV +++  EL+G+QI V   +  V
Sbjct: 216 PALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
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>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = -3

Query: 530 PSTEVTILTDKFGQPKGFAYVEFVEAEAIQEAV-KLSESELHGRQIKVAPKRTNV 369
           P+  V ++TD+ G+ KGF +V F   E  Q+AV +++  EL+G+QI V   +  V
Sbjct: 216 PALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
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>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = -3

Query: 530 PSTEVTILTDKFGQPKGFAYVEFVEAEAIQEAV-KLSESELHGRQIKVAPKRTNV 369
           P+  V ++TD+ G+ KGF +V F   E  Q+AV +++  EL+G+QI V   +  V
Sbjct: 216 PALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
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>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein|
           3) (PABP 3) (Testis-specific poly(A)-binding protein)
          Length = 631

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = -3

Query: 530 PSTEVTILTDKFGQPKGFAYVEFVEAEAIQEAV-KLSESELHGRQIKVAPKRTNV 369
           P+  V ++TD+ G+ KGF +V F   E  Q+AV +++  EL+G+QI V   +  V
Sbjct: 216 PALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
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>CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit, tau variant|
           (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit,
           tau variant) (TauCstF-64)
          Length = 632

 Score = 31.6 bits (70), Expect(2) = 0.010
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -2

Query: 606 RSVFVGNVDYACTPEEVQQHFNSCGTV 526
           RSVFVGN+ Y  T E+++  F+  G+V
Sbjct: 16  RSVFVGNIPYEATEEQLKDIFSEVGSV 42



 Score = 26.9 bits (58), Expect(2) = 0.010
 Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -3

Query: 494 GQPKGFAYVEFVEAEAIQEAVK-LSESELHGRQIKV 390
           G+PKG+ + E+ + E    A++ L+  E  GR ++V
Sbjct: 54  GKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV 89
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>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant|
           (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit,
           tau variant) (TauCstF-64)
          Length = 616

 Score = 31.6 bits (70), Expect(2) = 0.010
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -2

Query: 606 RSVFVGNVDYACTPEEVQQHFNSCGTV 526
           RSVFVGN+ Y  T E+++  F+  G+V
Sbjct: 16  RSVFVGNIPYEATEEQLKDIFSEVGSV 42



 Score = 26.9 bits (58), Expect(2) = 0.010
 Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -3

Query: 494 GQPKGFAYVEFVEAEAIQEAVK-LSESELHGRQIKV 390
           G+PKG+ + E+ + E    A++ L+  E  GR ++V
Sbjct: 54  GKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV 89
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>NOP12_SCHPO (O13741) Nucleolar protein 12|
          Length = 438

 Score = 30.0 bits (66), Expect(2) = 0.013
 Identities = 12/41 (29%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = -3

Query: 485 KGFAYVEFVEAEAIQEAVKLSESEL-HGRQIKVAPKRTNVP 366
           KGFAY++F +   + +A+ L+E ++  GR +++   ++  P
Sbjct: 311 KGFAYIQFKDTMGVDKALLLNEKKMPEGRTLRIMRAKSTKP 351



 Score = 28.1 bits (61), Expect(2) = 0.013
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -2

Query: 606 RSVFVGNVDYACTPEEVQQHFNSCGTVN 523
           R VFVGN+ +    E + ++F  CG+++
Sbjct: 270 RCVFVGNLAFEAEEEPLWRYFGDCGSID 297
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>SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nuclear|
           ribonucleoprotein 40) (HNRNP 40)
          Length = 344

 Score = 30.4 bits (67), Expect(2) = 0.013
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = -2

Query: 681 AKVAKEMQGGDPNATTSEAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTV 526
           A  A    G   N + +  + + D R +FVG + +  T +E++ HF   G +
Sbjct: 32  AGAAGSTNGSSDNQSAASGQRD-DDRKLFVGGLSWETTEKELRDHFGKYGEI 82



 Score = 27.7 bits (60), Expect(2) = 0.013
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -3

Query: 518 VTILTD-KFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAPKR 378
           + + TD + G+ +GFA++ F   EAI +     E  ++ +  KV PK+
Sbjct: 85  INVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHIINSK--KVDPKK 130
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>RBM11_HUMAN (P57052) Putative RNA-binding protein 11 (RNA-binding motif protein|
           11)
          Length = 281

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = -3

Query: 548 ILILAEPSTEVTILTDKFGQPKGFAYVEFVEAEAIQEAVKLSES-ELHGRQIKV 390
           + + A P T+VTI  D+ G+PK F +V F   E++  A+ L     L+GR I V
Sbjct: 29  LFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIALLNGIRLYGRPINV 82
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>IF4H_MOUSE (Q9WUK2) Eukaryotic translation initiation factor 4H (eIF-4H)|
           (Williams-Beuren syndrome chromosome region 1 protein
           homolog)
          Length = 247

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 24/58 (41%), Positives = 33/58 (56%)
 Frame = -3

Query: 506 TDKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAPKRTNVPGLKQPRGGRGF 333
           TDKF   KGF YVEF E ++++EA+    + L  R ++V        G KQ +GG GF
Sbjct: 77  TDKF---KGFCYVEFDEVDSLKEALTYDGALLGDRSLRV----DIAEGRKQDKGGFGF 127
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>IF4H_HUMAN (Q15056) Eukaryotic translation initiation factor 4H (eIF-4H)|
           (Williams-Beuren syndrome chromosome region 1 protein)
          Length = 247

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 24/58 (41%), Positives = 33/58 (56%)
 Frame = -3

Query: 506 TDKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAPKRTNVPGLKQPRGGRGF 333
           TDKF   KGF YVEF E ++++EA+    + L  R ++V        G KQ +GG GF
Sbjct: 77  TDKF---KGFCYVEFDEVDSLKEALTYDGALLGDRSLRV----DIAEGRKQDKGGFGF 127
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>NUCL_XENLA (P20397) Nucleolin (Protein C23)|
          Length = 650

 Score = 34.3 bits (77), Expect(2) = 0.017
 Identities = 14/43 (32%), Positives = 27/43 (62%)
 Frame = -3

Query: 518 VTILTDKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKV 390
           +TI   + G  K F YV+F   E +++A+KL+  ++ G ++K+
Sbjct: 261 LTIQDIRIGNSKKFGYVDFSSEEEVEKALKLTGKKILGTEVKI 303



 Score = 33.5 bits (75), Expect = 0.65
 Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
 Frame = -3

Query: 533 EPSTEVTILTDKFGQPKGFAYVEFVEAEAIQEAV-KLSESELHGRQIKVAPKRTNVPGLK 357
           E +T + I  ++ G+ KGFA++EF  AE  ++A+   + +E+ GR I++   +   P   
Sbjct: 435 EKATSIRIPQNQ-GRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRLEFSQGGGP--- 490

Query: 356 QPRGGRG 336
              GGRG
Sbjct: 491 -QGGGRG 496



 Score = 29.6 bits (65), Expect = 9.4
 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = -3

Query: 527 STEVTILTDK-FGQPKGFAYVEFVEAEAIQEAVK-LSESELHGRQIKVAPKRTNVPGLKQ 354
           S    I+TD+  G  KGF +V+F  AE  + A + + + E+ G ++ +   +   P    
Sbjct: 525 SVNARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAMEDGEIDGNKVTLDFAK---PKGDS 581

Query: 353 PRGGRG 336
            RGGRG
Sbjct: 582 QRGGRG 587



 Score = 23.5 bits (49), Expect(2) = 0.017
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 681 AKVAKEMQGGDPNATTSEAKEEMDSRSVFVGNVD 580
           AK  KEM    P A  ++     +  S+F+GN++
Sbjct: 207 AKRKKEMPKTIPEAKKTKTDTASEGLSIFIGNLN 240
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>ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core|
           protein A1-A) (PEN repeat clone P9)
          Length = 365

 Score = 38.1 bits (87), Expect = 0.026
 Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
 Frame = -3

Query: 521 EVTILTDK-FGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQI---KVAPKRTNVPGLKQ 354
           ++ I+ DK  G+ +GFA+VEF + + + + V   + +L+G+ +   K  PK+ +  G   
Sbjct: 150 DINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQGGGG 209

Query: 353 PRGGRG 336
            RGG G
Sbjct: 210 GRGGPG 215



 Score = 30.8 bits (68), Expect = 4.2
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -2

Query: 657 GGDPNATTSEAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTV 526
           G D +       E    R +F+G +DY  T E ++ HF   G +
Sbjct: 14  GHDDDFPQDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNI 57
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>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor|
          Length = 324

 Score = 34.7 bits (78), Expect = 0.29
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -3

Query: 494 GQPKGFAYVEFVEAEAIQEAV-KLSESELHGRQIKVAPKRTNVPGLKQP 351
           G+ +GF ++ F  AEA+  A+  ++E EL GR     P R NV G K P
Sbjct: 255 GRSRGFGFITFSSAEAMNSALDTMNEVELEGR-----PLRLNVAGQKAP 298



 Score = 30.8 bits (68), Expect(2) = 0.029
 Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
 Frame = -3

Query: 542 ILAEPST--EVTILTDKF-GQPKGFAYVEFVEAEAIQEAVKLSE-SELHGRQIKVAPKRT 375
           I AE  T   V I+ D+   + +GFA+V     E  +EA++L + S++ GR +KV     
Sbjct: 133 IFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKV----- 187

Query: 374 NVPGLKQPRGG 342
           N P  + PRGG
Sbjct: 188 NFP--EVPRGG 196



 Score = 26.2 bits (56), Expect(2) = 0.029
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
 Frame = -2

Query: 630 EAKEEMDSRSV-----FVGNVDYACTPEEVQQHFNSCGTV 526
           E +E ++S SV     +VGN+ ++ T  ++ + F   GTV
Sbjct: 101 EKEERVESESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTV 140
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>NCBP2_YEAST (Q08920) Nuclear cap-binding protein subunit 2|
          Length = 208

 Score = 37.7 bits (86), Expect = 0.034
 Identities = 15/44 (34%), Positives = 28/44 (63%)
 Frame = -2

Query: 651 DPNATTSEAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTVNR 520
           +PN    E +E M S +++VGN+ +  + E++ + F+ CGT+ R
Sbjct: 32  NPNGL-QELRESMKSSTIYVGNLSFYTSEEQIYELFSKCGTIKR 74
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>DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 298

 Score = 37.4 bits (85), Expect = 0.045
 Identities = 17/46 (36%), Positives = 29/46 (63%)
 Frame = -3

Query: 521 EVTILTDKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAP 384
           EV I+TD+ G  KG+ +V F     +Q+ V+ S+   HG+++K+ P
Sbjct: 68  EVKIITDRTGVSKGYGFVSFYNDVDVQKIVE-SQINFHGKKLKLGP 112
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>DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 295

 Score = 37.4 bits (85), Expect = 0.045
 Identities = 17/46 (36%), Positives = 29/46 (63%)
 Frame = -3

Query: 521 EVTILTDKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAP 384
           EV I+TD+ G  KG+ +V F     +Q+ V+ S+   HG+++K+ P
Sbjct: 68  EVKIITDRTGVSKGYGFVSFFNDVDVQKIVE-SQINFHGKKLKLGP 112
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>DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1) (DAZ homolog)
           (SPGY-like-autosomal)
          Length = 295

 Score = 37.4 bits (85), Expect = 0.045
 Identities = 17/46 (36%), Positives = 29/46 (63%)
 Frame = -3

Query: 521 EVTILTDKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAP 384
           EV I+TD+ G  KG+ +V F     +Q+ V+ S+   HG+++K+ P
Sbjct: 68  EVKIITDRTGVSKGYGFVSFFNDVDVQKIVE-SQINFHGKKLKLGP 112
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>DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 296

 Score = 37.4 bits (85), Expect = 0.045
 Identities = 17/46 (36%), Positives = 29/46 (63%)
 Frame = -3

Query: 521 EVTILTDKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAP 384
           EV I+TD+ G  KG+ +V F     +Q+ V+ S+   HG+++K+ P
Sbjct: 68  EVKIITDRTGVSKGYGFVSFFNDVDVQKIVE-SQINFHGKKLKLGP 112
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>HRB1_YEAST (P38922) Protein HRB1 (Protein TOM34)|
          Length = 429

 Score = 36.6 bits (83), Expect = 0.077
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = -2

Query: 645 NATTSEAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTVNRSD 514
           ++T  E      S S+FVGN+ Y  TPE++ + F+  G V R+D
Sbjct: 123 DSTYEEKVNRNYSNSIFVGNLTYDSTPEDLTEFFSQIGKVVRAD 166
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>NOP12_YARLI (Q6C2Q7) Nucleolar protein 12|
          Length = 509

 Score = 28.1 bits (61), Expect(2) = 0.099
 Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
 Frame = -3

Query: 548 ILILAEPSTEVTILTDKFGQPKGFAYVEFVEAEAIQEAV--------KLSESELHGRQIK 393
           + I+ +P T V          KGFAYV+F +  ++++A+        +LS+S  + R+++
Sbjct: 303 VRIVRDPKTNVG---------KGFAYVQFKDVNSVEQALLLNGKGINELSKSTTNKRKLR 353

Query: 392 VA 387
           V+
Sbjct: 354 VS 355



 Score = 26.9 bits (58), Expect(2) = 0.099
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 606 RSVFVGNVDYACTPEEVQQHFNSCGTV 526
           R VFVG +D+    E + + F+SCG V
Sbjct: 274 RCVFVGALDFEEQEESLWEAFSSCGDV 300
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>NOP12_CANAL (Q5AHI7) Nucleolar protein 12|
          Length = 454

 Score = 28.5 bits (62), Expect(2) = 0.100
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
 Frame = -3

Query: 518 VTILTD-KFGQPKGFAYVEFVEAEAIQEAVKLSESELH------GRQIKVAPKRTNV-PG 363
           V I+ D K    KGFA V+F +  ++ +A+ L++  L       GR+++++  ++N  P 
Sbjct: 296 VRIIRDSKTNLGKGFALVQFKDTLSVNKALLLNDKPLETGTQKKGRKLRISRAKSNAKPS 355

Query: 362 LKQP 351
           L  P
Sbjct: 356 LMSP 359



 Score = 26.6 bits (57), Expect(2) = 0.100
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -2

Query: 612 DSRSVFVGNVDYACTPEEVQQHFNS 538
           + R++FVGN+D+    E + ++FNS
Sbjct: 263 NKRTIFVGNLDFEEKEETLWKYFNS 287
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>RBM14_PONPY (Q5RC41) RNA-binding protein 14 (RNA-binding motif protein 14)|
          Length = 669

 Score = 36.2 bits (82), Expect = 0.10
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = -2

Query: 705 AAALREMQAKVAKEMQGGDPNATTSEAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTV 526
           A ALR ++A    E++ G            +++  +FVGNV  ACT +E++  F   G V
Sbjct: 46  AGALRAIEALHGHELRPGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRV 105

Query: 525 NRSD 514
              D
Sbjct: 106 IECD 109
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>RBM14_HUMAN (Q96PK6) RNA-binding protein 14 (RNA-binding motif protein 14)|
           (RRM-containing coactivator activator/modulator)
           (Synaptotagmin-interacting protein) (SYT-interacting
           protein)
          Length = 669

 Score = 36.2 bits (82), Expect = 0.10
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = -2

Query: 705 AAALREMQAKVAKEMQGGDPNATTSEAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTV 526
           A ALR ++A    E++ G            +++  +FVGNV  ACT +E++  F   G V
Sbjct: 46  AGALRAIEALHGHELRPGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRV 105

Query: 525 NRSD 514
              D
Sbjct: 106 IECD 109
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>NUCL_CHICK (P15771) Nucleolin (Protein C23)|
          Length = 694

 Score = 36.2 bits (82), Expect = 0.10
 Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
 Frame = -3

Query: 539 LAEPSTEVTILTDKFGQPKGFAYVEFVEAEAIQEAV-KLSESELHGRQIKV 390
           L + +T + +  +  G+PKG+A+VEF  AE  +EA+   + +E+ GR I++
Sbjct: 480 LFKKATSIKMPQNNQGRPKGYAFVEFPTAEDAKEALNSCNNTEIEGRAIRL 530



 Score = 33.1 bits (74), Expect = 0.85
 Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
 Frame = -3

Query: 500 KFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKV--APKRTNVPGLKQPRGGR 339
           + G  K F YV+F+ AE + +A++L+  +L G +IK+  A  + ++   K+ R  R
Sbjct: 316 RIGSSKRFGYVDFLSAEDMDKALQLNGKKLMGLEIKLEKAKSKESLKENKKERDAR 371
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>RNP24_SCHPO (Q09100) RNA-binding protein rnp24|
          Length = 369

 Score = 36.2 bits (82), Expect = 0.10
 Identities = 17/38 (44%), Positives = 26/38 (68%)
 Frame = -3

Query: 503 DKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKV 390
           +K  Q KGFAYV+F   +A++ A++ SE  L+GR I +
Sbjct: 159 EKRFQNKGFAYVDFATEDALKLALQCSEKALNGRNILI 196



 Score = 31.6 bits (70), Expect(2) = 0.13
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = -2

Query: 642 ATTSEAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTVNR 520
           A+   +K+E  S  +FVGN+D+  T  ++++HF   G + R
Sbjct: 217 ASIQSSKKEPSS-ILFVGNLDFETTDADLKEHFGQVGQIRR 256



 Score = 23.1 bits (48), Expect(2) = 0.13
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = -3

Query: 494 GQPKGFAYVEFVEAEAIQEAVKLSES 417
           G+ KGF +V+F + +   +A++L  +
Sbjct: 266 GKCKGFGFVDFPDIDTCMKAMELGHN 291
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>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear|
           (Poly(A)-binding protein) (PABP) (ARS consensus-binding
           protein ACBP-67) (Polyadenylate tail-binding protein)
          Length = 576

 Score = 35.8 bits (81), Expect = 0.13
 Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
 Frame = -3

Query: 512 ILTDKFGQPKGFAYVEFVEAEAIQEAV-KLSESELHGRQIKVAP 384
           I TD+ G+ KGF +V F E  A +EA+  L+   L+G++I VAP
Sbjct: 156 IATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAP 199
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>NUCL_MOUSE (P09405) Nucleolin (Protein C23)|
          Length = 706

 Score = 35.8 bits (81), Expect = 0.13
 Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = -3

Query: 533 EPSTEVTILTDKFGQPKGFAYVEFVEAEAIQEAV-KLSESELHGRQIKVAPKRTN 372
           E +T + +  +  G+PKG+A++EF   E  +EA+   ++ E+ GR I++  + +N
Sbjct: 507 EKATFIKVPQNPHGKPKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLELQGSN 561



 Score = 30.4 bits (67), Expect = 5.5
 Identities = 12/44 (27%), Positives = 29/44 (65%)
 Frame = -3

Query: 521 EVTILTDKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKV 390
           ++ ++  + G  + F YV+F  AE +++A++L+  ++ G +IK+
Sbjct: 336 DLAVVDVRTGTNRKFGYVDFESAEDLEKALELTGLKVFGNEIKL 379
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>SCE3_SCHPO (O14369) Probable RNA-binding protein sce3|
          Length = 388

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
 Frame = -3

Query: 554 SSILILAEPSTEVTILTDKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVA---P 384
           +SI ++ +P TE         + +GF YVEF  A+ +  A+ LS  +L GR +++    P
Sbjct: 119 TSIRLVIDPLTE---------RSRGFGYVEFETADTLSAALALSGEDLMGRPVRITVAEP 169

Query: 383 KRT 375
           +R+
Sbjct: 170 RRS 172
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>RBM14_MOUSE (Q8C2Q3) RNA-binding protein 14 (RNA-binding motif protein 14)|
          Length = 669

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 19/64 (29%), Positives = 31/64 (48%)
 Frame = -2

Query: 705 AAALREMQAKVAKEMQGGDPNATTSEAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTV 526
           A A+R ++A    E++ G            +++  +FVGNV  ACT +E++  F   G V
Sbjct: 46  AGAVRAIEALHGHELRPGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRV 105

Query: 525 NRSD 514
              D
Sbjct: 106 IECD 109
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>RBM14_BOVIN (Q5EA36) RNA-binding protein 14 (RNA-binding motif protein 14)|
          Length = 669

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 19/64 (29%), Positives = 31/64 (48%)
 Frame = -2

Query: 705 AAALREMQAKVAKEMQGGDPNATTSEAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTV 526
           A A+R ++A    E++ G            +++  +FVGNV  ACT +E++  F   G V
Sbjct: 46  AGAVRAIEALHGHELRPGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRV 105

Query: 525 NRSD 514
              D
Sbjct: 106 IECD 109
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>GAR2_SCHPO (P41891) Protein gar2|
          Length = 500

 Score = 30.0 bits (66), Expect(2) = 0.27
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = -3

Query: 512 ILTDKFGQPKGFAYVEFVEAEAIQEAVKLS-ESELHGRQIKV---APKRTNVPGLKQPRG 345
           I+  + G+ KG+ YV+F   EA + AV  +   E+ GR + +    P+  N     Q R 
Sbjct: 295 IMDGQSGRSKGYGYVDFETPEAAKAAVAANGTKEIDGRMVNLDLSNPRPANPQPYAQQRA 354

Query: 344 G 342
           G
Sbjct: 355 G 355



 Score = 23.5 bits (49), Expect(2) = 0.27
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = -2

Query: 648 PNATTSEAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTV 526
           P   T  +++  ++ +VFVG + +    + + Q F   GT+
Sbjct: 249 PAKITKPSQDSNETCTVFVGRLSWNVDDQWLGQEFEEYGTI 289
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>RBM7_HUMAN (Q9Y580) RNA-binding protein 7 (RNA-binding motif protein 7)|
          Length = 266

 Score = 34.7 bits (78), Expect = 0.29
 Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = -3

Query: 536 AEPSTEVTILTDKFGQPKGFAYVEFVEAEAIQEAVKLSES-ELHGRQIKV 390
           A P  +V I  DK G+PK FA+V F    ++  A+ L    +L+GR IK+
Sbjct: 33  AGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLNGIKLYGRPIKI 82
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>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast|
           precursor
          Length = 289

 Score = 34.7 bits (78), Expect = 0.29
 Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
 Frame = -3

Query: 521 EVTILTDK-FGQPKGFAYVEFVEAEAIQEAVK-LSESELHGRQIKVAPKRTNVP 366
           E  ++ D+  G+ KGF +V +  ++ +Q A+K L  ++L GRQI+V+      P
Sbjct: 232 EARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPP 285
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>CB017_HUMAN (Q8NC44) Protein C2orf17|
          Length = 543

 Score = 34.3 bits (77), Expect = 0.38
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
 Frame = -2

Query: 372 RSWVEAAPRGPRIQPIWRPPLHEAISTTVLQSLWWLWESSQVPP---TAQALLLKFLL 208
           R W        R+  +W  PLH  ++   L  L+WL  SS + P    + +LL  FLL
Sbjct: 61  RGWEAVLAAAQRLL-VWEKPLHSLVTAAALNGLFWLLSSSSLRPFFLLSVSLLAYFLL 117
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>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein|
           1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A)
           (PABP 1-A) (xPABP1-A)
          Length = 633

 Score = 33.9 bits (76), Expect = 0.50
 Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
 Frame = -3

Query: 530 PSTEVTILTDKFGQPKGFAYVEFVEAEAIQEAV-KLSESELHGRQIKVAPKRTNV 369
           P+  V ++TD  G+ KGF +V F   E  Q+AV +++  +++G+ + V   +  V
Sbjct: 216 PALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKV 270
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>CB017_MOUSE (Q6NS82) Protein C2orf17 homolog|
          Length = 541

 Score = 33.9 bits (76), Expect = 0.50
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
 Frame = -2

Query: 372 RSWVEAAPRGPRIQPIWRPPLHEAISTTVLQSLWWLWESSQVPP---TAQALLLKFLL 208
           R W        R+  +W  PLH  ++   L  L+WL  SS + P    + +LL  FLL
Sbjct: 56  RGWEAVLAAAQRLL-VWEKPLHSLVTAATLNGLFWLLSSSSLRPFFLLSISLLTYFLL 112
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>RBM7_BOVIN (Q3MHY8) RNA-binding protein 7 (RNA-binding motif protein 7)|
          Length = 262

 Score = 33.5 bits (75), Expect = 0.65
 Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = -3

Query: 536 AEPSTEVTILTDKFGQPKGFAYVEFVEAEAIQEAVKLSES-ELHGRQIKV 390
           A P  +V I  DK G+PK FA+V F    ++  A+ L    +L GR IK+
Sbjct: 33  AGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLNGIKLFGRPIKI 82
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>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)|
          Length = 633

 Score = 33.1 bits (74), Expect = 0.85
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = -3

Query: 536 AEPSTEVTILTDKF-GQPKGFAYVEFVEAEAIQEAVKLSES 417
           A P  ++ ++ D   GQ +G+A++ F   EA QEAVKL +S
Sbjct: 188 AGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDS 228
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>RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 427

 Score = 33.1 bits (74), Expect = 0.85
 Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
 Frame = -3

Query: 530 PSTEVTILTDKF-GQPKGFAYVEFVEAEAIQEAVKLSESE-LHGRQIKVAPKR-TNVPGL 360
           P   V ++TD+   +PKG+A++E++    ++ A K ++ + + GR++ V  +R   VP  
Sbjct: 163 PIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQADGQKIDGRRVLVDVERGRTVPNW 222

Query: 359 KQPRGGRG 336
           +  R G G
Sbjct: 223 RPRRLGGG 230
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>GRSF1_MOUSE (Q8C5Q4) G-rich sequence factor 1 (GRSF-1)|
          Length = 479

 Score = 33.1 bits (74), Expect = 0.85
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -3

Query: 521 EVTILTDKFGQPK-GFAYVEFVEAEAIQEAVKLSESELHGRQIKVAPKRTN 372
           ++T + D  G+ K G AYV+F E E   +A+     E+  R I++ P R N
Sbjct: 276 DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRN 326
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>GRSF1_HUMAN (Q12849) G-rich sequence factor 1 (GRSF-1)|
          Length = 447

 Score = 33.1 bits (74), Expect = 0.85
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -3

Query: 521 EVTILTDKFGQPK-GFAYVEFVEAEAIQEAVKLSESELHGRQIKVAPKRTN 372
           ++T + D  G+ K G AYV+F E E   +A+     E+  R I++ P R N
Sbjct: 244 DITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRN 294
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>PPIE_SCHMA (Q26548) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase|
           E) (Rotamase E) (Cyclophilin E)
          Length = 273

 Score = 33.1 bits (74), Expect = 0.85
 Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = -3

Query: 485 KGFAYVEFVEAEAIQEAV-KLSESELHGRQIKV 390
           +GFA+VEF E E    A+  ++ESE+ GR I+V
Sbjct: 11  RGFAFVEFEEVEDAMSAIDNMNESEIFGRTIRV 43
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>MRD1_SCHPO (O13620) Multiple RNA-binding domain-containing protein 1|
          Length = 833

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -3

Query: 500 KFGQPKGFAYVEFVEA-EAIQEAVKLSESELHGRQIKVAPKR 378
           K   PKGFAY++F +A +A++  ++L      GR + V P +
Sbjct: 359 KTNNPKGFAYIDFHDADDAVRAYLELDAKPFQGRLLHVLPAK 400
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>NUCL_PONPY (Q5RF26) Nucleolin|
          Length = 711

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = -3

Query: 533 EPSTEVTILTDKFGQPKGFAYVEFVEAEAIQEAV-KLSESELHGRQIKVAPKRTNVPGLK 357
           E +T + +  ++ G+ KG+A++EF   E  +EA+   ++ E+ GR I++         L+
Sbjct: 508 EKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLE--------LQ 559

Query: 356 QPRG 345
            PRG
Sbjct: 560 GPRG 563



 Score = 32.0 bits (71), Expect = 1.9
 Identities = 12/44 (27%), Positives = 29/44 (65%)
 Frame = -3

Query: 521 EVTILTDKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKV 390
           ++ ++  + G  + F YV+F  AE +++A++L+  ++ G +IK+
Sbjct: 336 DLAVVDVRIGMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKL 379
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>NCBP2_ASHGO (Q754W7) Nuclear cap-binding protein subunit 2|
          Length = 218

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 10/37 (27%), Positives = 25/37 (67%)
 Frame = -2

Query: 630 EAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTVNR 520
           E ++ M S +++VGN+ +  + E++ + F+ CG++ +
Sbjct: 38  ELRKSMTSATIYVGNLSFYTSEEQLYELFSKCGSIEK 74
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>NUCL_HUMAN (P19338) Nucleolin (Protein C23)|
          Length = 709

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = -3

Query: 533 EPSTEVTILTDKFGQPKGFAYVEFVEAEAIQEAV-KLSESELHGRQIKVAPKRTNVPGLK 357
           E +T + +  ++ G+ KG+A++EF   E  +EA+   ++ E+ GR I++         L+
Sbjct: 506 EKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLE--------LQ 557

Query: 356 QPRG 345
            PRG
Sbjct: 558 GPRG 561



 Score = 32.0 bits (71), Expect = 1.9
 Identities = 12/44 (27%), Positives = 29/44 (65%)
 Frame = -3

Query: 521 EVTILTDKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKV 390
           ++ ++  + G  + F YV+F  AE +++A++L+  ++ G +IK+
Sbjct: 334 DLAVVDVRIGMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKL 377
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>NUCL_MACFA (Q4R4J7) Nucleolin|
          Length = 710

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = -3

Query: 533 EPSTEVTILTDKFGQPKGFAYVEFVEAEAIQEAV-KLSESELHGRQIKVAPKRTNVPGLK 357
           E +T + +  ++ G+ KG+A++EF   E  +EA+   ++ E+ GR I++         L+
Sbjct: 507 EKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLE--------LQ 558

Query: 356 QPRG 345
            PRG
Sbjct: 559 GPRG 562



 Score = 32.0 bits (71), Expect = 1.9
 Identities = 12/44 (27%), Positives = 29/44 (65%)
 Frame = -3

Query: 521 EVTILTDKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKV 390
           ++ ++  + G  + F YV+F  AE +++A++L+  ++ G +IK+
Sbjct: 335 DLAVVDVRIGMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKL 378
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>NUCL_MESAU (P08199) Nucleolin (Protein C23)|
          Length = 713

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = -3

Query: 533 EPSTEVTILTDKFGQPKGFAYVEFVEAEAIQEAV-KLSESELHGRQIKVAPKRTNVPGLK 357
           E +T + +  ++ G+ KG+A++EF   E  +EA+   ++ E+ GR I++         L+
Sbjct: 506 EKATFIKVPQNQQGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLE--------LQ 557

Query: 356 QPRG 345
            PRG
Sbjct: 558 GPRG 561



 Score = 31.2 bits (69), Expect = 3.2
 Identities = 14/52 (26%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
 Frame = -3

Query: 539 LAEP--STEVTILTDKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKV 390
           ++EP    ++ ++  + G  + F YV+F  AE +++A++L+  ++ G +IK+
Sbjct: 327 ISEPFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALELTGLKVFGNEIKL 378
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>NUCL_RAT (P13383) Nucleolin (Protein C23)|
          Length = 712

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = -3

Query: 533 EPSTEVTILTDKFGQPKGFAYVEFVEAEAIQEAV-KLSESELHGRQIKVAPKRTNVPGLK 357
           E +T + +  +  G+ KG+A++EF   E  +EA+   ++ E+ GR I++         L+
Sbjct: 509 EKATFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLE--------LQ 560

Query: 356 QPRG 345
            PRG
Sbjct: 561 GPRG 564
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>U2AF2_DROME (Q24562) Splicing factor U2AF 50 kDa subunit (U2 auxiliary factor|
           50 kDa subunit) (U2 snRNP auxiliary factor large
           subunit)
          Length = 416

 Score = 26.6 bits (57), Expect(2) = 1.6
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 609 SRSVFVGNVDYACTPEEVQQHFN 541
           +R ++VGN+ +  T EE+ + FN
Sbjct: 92  ARRLYVGNIPFGVTEEEMMEFFN 114



 Score = 24.3 bits (51), Expect(2) = 1.6
 Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 8/60 (13%)
 Frame = -3

Query: 512 ILTDKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKV--------APKRTNVPGLK 357
           +L  +    K FA++EF   +   +A+      L G+ +K+         P  T+ P +K
Sbjct: 130 VLACQINLDKNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPMPGITDTPAIK 189
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>GBP2_YEAST (P25555) Single-strand telomeric DNA-binding protein GBP2|
           (G-strand-binding protein 2) (RAP1 localization factor
           6)
          Length = 427

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = -2

Query: 630 EAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTVNRSD 514
           +A +     S+FV N+ + CTPE++++ F + G V  +D
Sbjct: 114 DATKRNFENSIFVRNLTFDCTPEDLKELFGTVGEVVEAD 152
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>IF4B_MOUSE (Q8BGD9) Eukaryotic translation initiation factor 4B (eIF-4B)|
          Length = 611

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -3

Query: 485 KGFAYVEFVEAEAIQEAVKLSESELHGRQIKV 390
           KGF Y EF + +++  A+ L+E  L  R+I+V
Sbjct: 137 KGFGYAEFEDLDSLLSALSLNEESLGNRRIRV 168
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>IF4B_HUMAN (P23588) Eukaryotic translation initiation factor 4B (eIF-4B)|
          Length = 611

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -3

Query: 485 KGFAYVEFVEAEAIQEAVKLSESELHGRQIKV 390
           KGF Y EF + +++  A+ L+E  L  R+I+V
Sbjct: 137 KGFGYAEFEDLDSLLSALSLNEESLGNRRIRV 168
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>PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase|
           E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33)
          Length = 301

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = -3

Query: 485 KGFAYVEFVEAEAIQEAV-KLSESELHGRQIKV 390
           +GFA+VEF  AE    A+  ++ESEL GR I+V
Sbjct: 47  RGFAFVEFELAEDAAAAIDNMNESELFGRTIRV 79
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>PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase|
           E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33)
          Length = 301

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = -3

Query: 485 KGFAYVEFVEAEAIQEAV-KLSESELHGRQIKV 390
           +GFA+VEF  AE    A+  ++ESEL GR I+V
Sbjct: 47  RGFAFVEFELAEDAAAAIDNMNESELFGRTIRV 79
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>PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-binding protein|
           1-B) (Cytoplasmic poly(A)-binding protein 1-B) (PABP-B)
           (PABP 1-B) (xPABP1-B)
          Length = 633

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = -3

Query: 518 VTILTDKFGQPKGFAYVEFVEAEAIQEAV-KLSESELHGRQIKVAPKRTNV 369
           V ++TD  G+ +GF +V F   E  Q+AV  ++  +L+G+ I V   +  V
Sbjct: 220 VKVMTDDHGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKV 270
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>YNR5_YEAST (P53883) Hypothetical 45.7 kDa protein in RPS3-PSD1 intergenic|
           region
          Length = 403

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = -2

Query: 693 REMQAKVAKEMQGGDPNATTSEAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTV 526
           R M  K ++   G           +   SR +FVGN+ +  T + +++HF  CG +
Sbjct: 210 RNMLIKDSENYSGRPDKDDLVAMSKNPPSRILFVGNLSFDVTDDLLRKHFQHCGDI 265



 Score = 30.8 bits (68), Expect = 4.2
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -3

Query: 485 KGFAYVEFVEAEAIQEAVKLSESELHGRQIKV 390
           KGF Y+ F   E ++  ++LSES L+GR + +
Sbjct: 183 KGFCYMFFKNVEQMKAVLELSESHLNGRNMLI 214
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>CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 572

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 639 TTSEAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTV 526
           T  +   +   RSVFVGN+ Y  T E+++  F+  G V
Sbjct: 5   TVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPV 42
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>CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 577

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 639 TTSEAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTV 526
           T  +   +   RSVFVGN+ Y  T E+++  F+  G V
Sbjct: 5   TVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPV 42
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>CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 577

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 639 TTSEAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTV 526
           T  +   +   RSVFVGN+ Y  T E+++  F+  G V
Sbjct: 5   TVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPV 42
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>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog|
          Length = 342

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 606 RSVFVGNVDYACTPEEVQQHFNSCGTV 526
           R +F+G +DY  T E ++QHF   G +
Sbjct: 17  RKLFIGGLDYRTTDESLKQHFEQWGEI 43
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>AKAP9_RABIT (Q28628) A-kinase anchor protein 9 (Protein kinase A-anchoring|
           protein 9) (PRKA9) (A-kinase anchor protein 120 kDa)
           (AKAP 120) (Fragment)
          Length = 1087

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 21/60 (35%), Positives = 28/60 (46%)
 Frame = -3

Query: 524 TEVTILTDKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAPKRTNVPGLKQPRG 345
           T++  L     +    A V  V+ EA+QE VKL   +     +   P RT VPGL Q  G
Sbjct: 555 TKIVSLQKVLEEKVAAALVSQVQLEAVQEYVKLCADK---PAVSSDPARTEVPGLSQLAG 611
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>PABPX_SCHPO (Q9P6M8) mRNA export factor crp79 (Polyadenylate-binding protein|
           crp79) (Poly(A)-binding protein) (PABP) (Meiotic
           expression up-regulated protein 5)
          Length = 710

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -2

Query: 618 EMDSRSVFVGNVDYACTPEEVQQHFNSCGTV 526
           E +S +++VGN+D   + EE+ +HF+  G V
Sbjct: 13  EDESSTIYVGNIDSRLSDEEIIKHFSKYGQV 43
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>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)|
          Length = 414

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
 Frame = -3

Query: 551 SILILAEPSTEVTILTDKFGQPKGFAYVEFVEAEAIQEAVKLSESE-LHGRQIKV---AP 384
           S+ I   P TE         QPKGF YV+F   E  ++A+   + E +  R +++   +P
Sbjct: 295 SVRIPTHPETE---------QPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDFSSP 345

Query: 383 KRTNVPGLKQPR--GGRG 336
           +  N  G    R  GGRG
Sbjct: 346 RPNNDGGRGGSRGFGGRG 363
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>CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 580

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -2

Query: 606 RSVFVGNVDYACTPEEVQQHFNSCGTV 526
           RSVFVGN+ Y  T E+++  F+  G V
Sbjct: 16  RSVFVGNIPYEATEEQLKDIFSEVGPV 42
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>U2AF2_CAEEL (P90978) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor|
           65 kDa subunit) (U2 snRNP auxiliary factor large
           subunit) (U2AF65)
          Length = 496

 Score = 26.2 bits (56), Expect(2) = 4.3
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 4/38 (10%)
 Frame = -2

Query: 609 SRSVFVGNVDYACTPEEVQQHFNS----CGTVNRSDYP 508
           SR ++VGN+ + C  E +   FN     CG       P
Sbjct: 183 SRRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNP 220



 Score = 23.1 bits (48), Expect(2) = 4.3
 Identities = 13/49 (26%), Positives = 20/49 (40%)
 Frame = -3

Query: 512 ILTDKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAPKRTNVP 366
           IL  +    K FA++EF   +     +        G+Q+KV   R   P
Sbjct: 221 ILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDYQP 269
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>MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing protein 1|
          Length = 887

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -3

Query: 509 LTDKFGQPKGFAYVEFVEAE-AIQEAVKLSESELHGRQIKVAP 384
           L  + GQ KGFAYV F +++ A+   V+L +    GR + + P
Sbjct: 378 LDTRTGQSKGFAYVLFKDSKNAVNAYVELDKQIFQGRLLHILP 420
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>NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NOP77)|
          Length = 685

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 630 EAKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTV 526
           +A+ + +  SVFV NV Y  T E +  HF+  G+V
Sbjct: 282 KAQNKREDFSVFVRNVPYDATEESLAPHFSKFGSV 316
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>U2AF2_CAEBR (P90727) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor|
           65 kDa subunit) (U2 snRNP auxiliary factor large
           subunit) (U2AF65)
          Length = 488

 Score = 25.8 bits (55), Expect(2) = 5.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 609 SRSVFVGNVDYACTPEEVQQHFN 541
           SR ++VGN+ + C  E +   FN
Sbjct: 174 SRRLYVGNIPFGCNEEAMLDFFN 196



 Score = 23.1 bits (48), Expect(2) = 5.5
 Identities = 13/49 (26%), Positives = 20/49 (40%)
 Frame = -3

Query: 512 ILTDKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAPKRTNVP 366
           IL  +    K FA++EF   +     +        G+Q+KV   R   P
Sbjct: 212 ILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDYQP 260
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>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 668

 Score = 27.3 bits (59), Expect(2) = 6.9
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -3

Query: 512 ILTDKFGQPKGFAYVEFVEAEAIQEAV-KLSESELHGRQIKV 390
           +  D  G+ KG+ +V+F + E  Q A+ KL+   L+ +Q+ V
Sbjct: 163 VAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFV 204



 Score = 21.2 bits (43), Expect(2) = 6.9
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = -2

Query: 603 SVFVGNVDYACTPEEVQQHFNSCGTV 526
           +VF+ N+D +   + + + F+S GT+
Sbjct: 133 NVFIKNLDASIDNKALYETFSSFGTI 158
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>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)|
           (PABP)
          Length = 653

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = -3

Query: 524 TEVTILTDKFGQPKGFAYVEFVEAEAIQEAV-KLSESELHGRQIKVA 387
           T   I+TD+ G+ KGF +V +   E   +AV ++++  L G+ + VA
Sbjct: 391 TSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVA 437
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>NOP3_YEAST (Q01560) Nucleolar protein 3 (Mitochondrial targeting suppressor 1|
           protein) (Nuclear polyadenylated RNA-binding protein 1)
          Length = 414

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 19/49 (38%), Positives = 26/49 (53%)
 Frame = -3

Query: 530 PSTEVTILTDKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAP 384
           P  EV IL        GFA+VEF EAE+  +A++    E+HG+     P
Sbjct: 150 PMKEVKILN-------GFAFVEFEEAESAAKAIE----EVHGKSFANQP 187
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>YHC4_YEAST (P38741) Hypothetical 80.1 kDa protein in SNF6-SPO11 intergenic|
           region
          Length = 713

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -2

Query: 615 MDSRSVFVGNVDYACTPEEVQQHFNSCGTV 526
           +D RS+FVG +D   T EE+ + F++ G +
Sbjct: 343 IDKRSIFVGQLDKETTREELNRRFSTHGKI 372
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>RB97D_DROME (Q02926) Ribonucleoprotein RB97D|
          Length = 471

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 14/30 (46%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
 Frame = -3

Query: 518 VTILTDKF-GQPKGFAYVEFVEAEAIQEAV 432
           V +LTDK  G+ +GFA+VEF + +A+ +A+
Sbjct: 152 VKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181
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>MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing protein 1|
          Length = 878

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = -3

Query: 521 EVTILTD-KFGQPKGFAYVEFVEAE-AIQEAVKLSESELHGRQIKVAP 384
           EV I  D + GQ KGFAYV F  A+ A    V+L +    GR + + P
Sbjct: 358 EVHIAVDTRTGQSKGFAYVLFKNADNAATAFVELDKQIFQGRLLHILP 405
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>U2AF2_MOUSE (P26369) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor|
           65 kDa subunit) (U2 snRNP auxiliary factor large
           subunit)
          Length = 475

 Score = 24.3 bits (51), Expect(2) = 9.1
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = -3

Query: 512 ILTDKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKV 390
           +L  +  Q K FA++EF   +   +A+        G+ +K+
Sbjct: 186 VLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKI 226



 Score = 23.9 bits (50), Expect(2) = 9.1
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 609 SRSVFVGNVDYACTPEEVQQHFNS 538
           +R ++VGN+ +  T E +   FN+
Sbjct: 148 ARRLYVGNIPFGITEEAMMDFFNA 171
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>U2AF2_HUMAN (P26368) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor|
           65 kDa subunit) (U2 snRNP auxiliary factor large
           subunit) (hU2AF(65))
          Length = 475

 Score = 24.3 bits (51), Expect(2) = 9.1
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = -3

Query: 512 ILTDKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKV 390
           +L  +  Q K FA++EF   +   +A+        G+ +K+
Sbjct: 186 VLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKI 226



 Score = 23.9 bits (50), Expect(2) = 9.1
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 609 SRSVFVGNVDYACTPEEVQQHFNS 538
           +R ++VGN+ +  T E +   FN+
Sbjct: 148 ARRLYVGNIPFGITEEAMMDFFNA 171
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>NOP12_DEBHA (Q6BTS9) Nucleolar protein 12|
          Length = 462

 Score = 26.6 bits (57), Expect(2) = 9.1
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -2

Query: 612 DSRSVFVGNVDYACTPEEVQQHFNS 538
           + R++FVGN+D+    E + ++FNS
Sbjct: 264 NKRTIFVGNLDFEEKEETLWRYFNS 288



 Score = 21.6 bits (44), Expect(2) = 9.1
 Identities = 10/49 (20%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
 Frame = -3

Query: 485 KGFAYVEFVEAEAIQEAVKLSESELHG---RQIKVAPKRTNV-PGLKQP 351
           KGFA V+F +  ++ +++ L++  +     R+++++  + +  P +  P
Sbjct: 309 KGFALVQFKDTLSVNKSLLLNDKPMSAEKKRKLRISKAKAHTKPSILSP 357
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>G3BP_SCHPO (O94260) Putative G3BP-like protein|
          Length = 434

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 15/57 (26%), Positives = 27/57 (47%)
 Frame = -3

Query: 500 KFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAPKRTNVPGLKQPRGGRGFN 330
           +F + KG AYV+FV  E +Q A+     +++   + +  +R    G     G +  N
Sbjct: 345 EFARRKGTAYVDFVNHECVQLALNKKTLQINNATLNIEERRRLFSGKFNKSGDKKSN 401
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>MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing protein 1|
          Length = 838

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = -3

Query: 521 EVTILTD-KFGQPKGFAYVEFVEAE-AIQEAVKLSESELHGRQIKVAP 384
           EV +  D + GQ KGFAYV F + E A    ++L +    GR + + P
Sbjct: 329 EVHVAVDTRTGQSKGFAYVLFKDPEHAANAYIELDKQIFQGRLLHILP 376
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>MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing protein 1|
          Length = 825

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -3

Query: 485 KGFAYVEFVEAEAIQEAVK-LSESELHGRQIKVAP 384
           KGFAYV+++E +A  +A K L      GR + + P
Sbjct: 342 KGFAYVQYIEPDAAVQAYKELDGKHFQGRLMHILP 376
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>ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 homolog (hnRNP|
           A1) (Helix-destabilizing protein) (Single-strand binding
           protein) (hnRNP core protein A1)
          Length = 365

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -2

Query: 633 SEAKEEMDS-RSVFVGNVDYACTPEEVQQHFNSCGTV 526
           SEA  E +  R +F+G + +  T E +++HF   GT+
Sbjct: 4   SEAPNEPEQLRKLFIGGLSFETTDESLREHFEQWGTL 40
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>NOP12_NEUCR (Q7S2L7) Nucleolar protein 12|
          Length = 594

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -3

Query: 560 KCSSILILAEPSTEVTILTDKFGQPKGFAYVEFVEAEAIQEAVKLS 423
           K  S+ ++ +P T V          KGFAYV+F +  A++ A+ L+
Sbjct: 371 KVESVRVVRDPVTRVG---------KGFAYVQFCDENAVESAILLN 407
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>HEMO_RAT (P20059) Hemopexin precursor|
          Length = 460

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 11/97 (11%)
 Frame = +3

Query: 249 PGSSPITTIRIVKRWWIWPHVGVAAIWVESSAP-----SGLLQPRNVSPLRCNLDLPTMK 413
           PGSS +      + WW+    G  A W E S P       L   +++ P  C+ + P + 
Sbjct: 365 PGSSKLYVTSGRRLWWLDLKSGAQATWAELSWPHEKVDGALCLEKSLGPYSCSSNGPNL- 423

Query: 414 L*LTKLDSFL---NSFCF---NKFNISKTFRLPKLVS 506
                   F+   N +C+   +K N +K+   P+ V+
Sbjct: 424 -------FFIHGPNLYCYSSIDKLNAAKSLPQPQKVN 453


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,094,154
Number of Sequences: 219361
Number of extensions: 1624313
Number of successful extensions: 5283
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 4979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5281
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7082949625
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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