ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags7o02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY103610.1| Zea mays PCO085932 mRNA sequence 321 2e-84
2dbj|AK099019.1| Oryza sativa (japonica cultivar-group) cDNA clon... 293 4e-76
3dbj|AK060429.1| Oryza sativa (japonica cultivar-group) cDNA clon... 293 4e-76
4ref|XM_467888.1| Oryza sativa (japonica cultivar-group), mRNA 202 1e-48
5dbj|AK061269.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 1e-48
6gb|AY109465.1| Zea mays CL6587_1 mRNA sequence 202 1e-48
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
8dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
9ref|XM_467889.1| Oryza sativa (japonica cultivar-group), mRNA 123 8e-25
10dbj|AK071146.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 8e-25
11dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 88 5e-14
12dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic D... 88 5e-14
13ref|NM_124491.2| Arabidopsis thaliana RNA binding / nucleic acid... 66 2e-07
14gb|BT014077.1| Lycopersicon esculentum clone 133177F, mRNA sequence 66 2e-07
15gb|AY116673.1| Arabidopsis thaliana unknown protein (At5g51120) ... 66 2e-07
16gb|AY079392.1| Arabidopsis thaliana unknown protein (At5g51120) ... 66 2e-07
17gb|AY057580.1| Arabidopsis thaliana unknown protein (At5g51120) ... 66 2e-07
18gb|AY054186.1| Arabidopsis thaliana AT5g51120/MWD22_6 mRNA, comp... 66 2e-07
19gb|AY084464.1| Arabidopsis thaliana clone 10876 mRNA, complete s... 66 2e-07
20dbj|AB023044.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 66 2e-07
21gb|AC121245.17| Medicago truncatula clone mth2-33g3, complete se... 58 4e-05
22ref|NM_125924.2| Arabidopsis thaliana RNA binding / nucleic acid... 56 2e-04
23gb|BT000018.1| Arabidopsis thaliana poly(A)-binding protein II-l... 56 2e-04
24gb|AF386984.1|AF386984 Arabidopsis thaliana poly(A)-binding prot... 56 2e-04
25emb|BX830904.1|CNS09YS7 Arabidopsis thaliana Full-length cDNA Co... 56 2e-04
26ref|NM_121073.2| Arabidopsis thaliana RNA binding / nucleic acid... 50 0.010
27ref|NM_180472.1| Arabidopsis thaliana RNA binding / nucleic acid... 50 0.010
28emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, B... 50 0.010
29emb|BX829898.1|CNS0A187 Arabidopsis thaliana Full-length cDNA Co... 50 0.010
30emb|BX829525.1|CNS0A1G5 Arabidopsis thaliana Full-length cDNA Co... 50 0.010
31gb|BT005003.1| Arabidopsis thaliana clone U20623 putative polyad... 50 0.010
32gb|BT003893.1| Arabidopsis thaliana clone RAFL15-13-K12 (R20623)... 50 0.010
33gb|AC114699.5| Rattus norvegicus 19 BAC CH230-235A3 (Children's ... 44 0.62
34gb|AC102288.11| Mus musculus chromosome 18, clone RP24-346H24, c... 42 2.4
35gb|AF488416.1| Zea mays chromosome 9 BAC 9C20 complete sequence 42 2.4
36gb|AC101777.8| Mus musculus chromosome 1, clone RP24-123J3, comp... 42 2.4
37gb|AE006255.1| Lactococcus lactis subsp. lactis IL1403 section 1... 42 2.4
38gb|AC004851.2| Homo sapiens PAC clone RP4-665P5 from 7, complete... 42 2.4
39gb|AC091296.3| Pan troglodytes clone RP43-109G19, complete sequence 42 2.4
40gb|AC011478.3| Homo sapiens chromosome 19 clone CTC-565M22, comp... 42 2.4
41gb|AC011477.5| Homo sapiens chromosome 19 clone CTC-559E9, compl... 42 2.4
42gb|AC131072.13| Mus musculus chromosome 1, clone RP23-396F21, co... 42 2.4
43gb|AC027229.17| Homo sapiens chromosome 18, clone RP11-737G21, c... 42 2.4
44gb|AC021302.11| Homo sapiens chromosome 18, clone RP11-203G13, c... 42 2.4
45gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1)... 42 2.4
46dbj|AK061346.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.4
47gb|AC004168.2|AC004168 Homo sapiens chromosome 4 clone B159L21 m... 42 2.4
48gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome 40 9.7
49ref|XM_366814.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 40 9.7
50gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 9.7
51gb|AY574035.1| Zea mays rust resistance protein rp3-1 (rp3-1) ge... 40 9.7
52gb|AY316747.1| Rhizobium sp. NGR234 megaplasmid 2 contig 1, comp... 40 9.7
53emb|CR954256.1| Anopheles gambiae Pen-1 region; BAC clones 30N20... 40 9.7
54gb|AC087728.3| Papio anubis clone RP41-340H23, complete sequence 40 9.7
55ref|XM_651341.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 9.7
56gb|AC009508.3| Homo sapiens BAC clone RP11-564N1 from 7, complet... 40 9.7
57gb|AC146050.3| Pan troglodytes BAC clone RP43-72L14 from 7, comp... 40 9.7
58gb|AC091763.25| Mus musculus strain C57BL/6J clone rp23-198o2 ma... 40 9.7
59gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume ... 40 9.7
60emb|BX927225.7| Zebrafish DNA sequence from clone CH211-106F9 in... 40 9.7
61gb|AC165173.2| Zea mays clone ZMMBBb-125O19, complete sequence 40 9.7
62emb|AL139819.8| Human DNA sequence from clone RP11-34D15 on chro... 40 9.7
63emb|AL157694.7| Human DNA sequence from clone RP11-157B21 on chr... 40 9.7
64gb|AC166741.1| Brassica rapa subsp. pekinensis clone KBrH080C09,... 40 9.7
65emb|AL596169.1| Listeria innocua Clip11262 complete genome, segm... 40 9.7
66gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 9.7
67gb|AC025647.9| Homo sapiens, clone RP11-316J7, complete sequence 40 9.7
68gb|AC090403.8| Homo sapiens chromosome 18, clone RP11-739N10, co... 40 9.7
69gb|AC083837.4| Homo sapiens chromosome 8, clone RP11-79H23, comp... 40 9.7
70gb|AC022176.6| Homo sapiens chromosome , clone RP11-149C3, compl... 40 9.7
71ref|NM_001021695.1| Schizosaccharomyces pombe 972h- hypothetical... 40 9.7
72gb|AC153546.10| Mus musculus 10 BAC RP23-356P21 (Roswell Park Ca... 40 9.7
73gb|AF546189.1| Contiguous genomic DNA sequence comprising the 19... 40 9.7
74gb|AY555143.1| Zea may BAC clone c573L14, complete sequence 40 9.7
75emb|AL590148.8| Zebrafish DNA sequence from clone RP71-30I22 in ... 40 9.7
76dbj|AP001359.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 9.7
77dbj|AP001924.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.7
78dbj|AP003474.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 9.7
79gb|AC174767.1| Gasterosteus aculeatus chromosome VMRC28-49C03, c... 40 9.7
80gb|AC141473.4| Mus musculus BAC clone RP24-187J17 from 3, comple... 40 9.7
81gb|AC133160.4| Mus musculus BAC clone RP24-531K24 from chromosom... 40 9.7
82gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete ge... 40 9.7
83emb|AL138498.5|CNS01DWT Human chromosome 14 DNA sequence BAC R-1... 40 9.7

>gb|AY103610.1| Zea mays PCO085932 mRNA sequence
          Length = 994

 Score =  321 bits (162), Expect = 2e-84
 Identities = 309/357 (86%), Gaps = 7/357 (1%)
 Strand = Plus / Minus

                                                                       
Query: 349 cggggctgcttcaacccaggaacgttagtccgcttcggtgcaaccttgatttgccgacca 408
           ||||| ||||||| ||||||||||||||||| ||||||||| |||||||  || ||||||
Sbjct: 612 cggggttgcttcatcccaggaacgttagtcctcttcggtgccaccttgagctggcgacca 553

                                                                       
Query: 409 tgaagctctgactcactaagcttgacagcttcctgaatagcttctgcttcaacaaattca 468
           || |  ||||| ||| | | ||| | ||||||||||| ||||||  ||||||||||||| 
Sbjct: 552 tgcaattctgattcattcaacttaatagcttcctgaacagcttcaacttcaacaaattcc 493

                                                                       
Query: 469 acataagcaaaacctttaggctgcccaaacttgtcagtcaggatagtcacttcggttgac 528
           ||||||||||||||||| || ||||||||||||||||||||||| |||||| | ||| ||
Sbjct: 492 acataagcaaaaccttttggttgcccaaacttgtcagtcaggattgtcact-ctgttaac 434

                                                                       
Query: 529 ggttccgcaagaattaaaatgctgctgcacttcttctggagtgcatgcatagtcaacatt 588
            ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 agttccacaagaattgaaatgctgctgcacttcttctggagtgcatgcatagtcaacatt 374

                                                                       
Query: 589 tccaacaaaaacagaacgagaatccatctcttcttttgcttcagatgtggtcgcattagg 648
           |||||| || || || |||||||||||||| |||||   |||||||||||| ||||| ||
Sbjct: 373 tccaacgaataccgaccgagaatccatctcctctttgttttcagatgtggttgcattggg 314

                                                                    
Query: 649 atctccgccttgcatctccttggcgaccttggcctgcatctcgcggagggcggcggc 705
           ||      ||||||| |||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 313 at------cttgcatatccttggcgaccttagcctgcatctcgcggagcgcggcggc 263



to top

>dbj|AK099019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118A14, full
           insert sequence
          Length = 938

 Score =  293 bits (148), Expect = 4e-76
 Identities = 311/364 (85%), Gaps = 1/364 (0%)
 Strand = Plus / Minus

                                                                       
Query: 333 gaatcctcggccccctcggggctgcttcaacccaggaacgttagtccgcttcggtgcaac 392
           |||||||| ||| || ||||||||||||| |||||| |||||||||| ||| || || ||
Sbjct: 616 gaatcctctgcctccgcggggctgcttcatcccagggacgttagtcctctttggcgccac 557

                                                                       
Query: 393 cttgatttgccgaccatgaagctctgactcactaagcttgacagcttcctgaatagcttc 452
           ||||||||| |||||||| || ||||| ||  | | ||| ||||||||||||| ||||||
Sbjct: 556 cttgatttggcgaccatgcagttctgattcgttcaacttaacagcttcctgaacagcttc 497

                                                                       
Query: 453 tgcttcaacaaattcaacataagcaaaacctttaggctgcccaaacttgtcagtcaggat 512
           | ||||||  |||||||||||||| |||||||| || |||||||||||||| ||||||||
Sbjct: 496 tacttcaaggaattcaacataagcgaaaccttttggttgcccaaacttgtctgtcaggat 437

                                                                       
Query: 513 agtcacttcggttgacggttccgcaagaattaaaatgctgctgcacttcttctggagtgc 572
            |||||  | |||||| ||||| || ||||||||||||||||| ||||| ||||| ||||
Sbjct: 436 tgtcac-cctgttgaccgttccacaggaattaaaatgctgctggacttcctctggggtgc 378

                                                                       
Query: 573 atgcatagtcaacatttccaacaaaaacagaacgagaatccatctcttcttttgcttcag 632
           ||||||||||||| ||||||||| | || || ||||  ||||| || ||||||| |||||
Sbjct: 377 atgcatagtcaacgtttccaacatataccgaccgagcgtccatttcctcttttgattcag 318

                                                                       
Query: 633 atgtggtcgcattaggatctccgccttgcatctccttggcgaccttggcctgcatctcgc 692
           ||| || ||||||||||||    ||||||||||||||||||||||||| |||||||||||
Sbjct: 317 atgaggacgcattaggatccagaccttgcatctccttggcgaccttggtctgcatctcgc 258

               
Query: 693 ggag 696
           ||||
Sbjct: 257 ggag 254



to top

>dbj|AK060429.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-A07, full
           insert sequence
          Length = 944

 Score =  293 bits (148), Expect = 4e-76
 Identities = 311/364 (85%), Gaps = 1/364 (0%)
 Strand = Plus / Minus

                                                                       
Query: 333 gaatcctcggccccctcggggctgcttcaacccaggaacgttagtccgcttcggtgcaac 392
           |||||||| ||| || ||||||||||||| |||||| |||||||||| ||| || || ||
Sbjct: 620 gaatcctctgcctccgcggggctgcttcatcccagggacgttagtcctctttggcgccac 561

                                                                       
Query: 393 cttgatttgccgaccatgaagctctgactcactaagcttgacagcttcctgaatagcttc 452
           ||||||||| |||||||| || ||||| ||  | | ||| ||||||||||||| ||||||
Sbjct: 560 cttgatttggcgaccatgcagttctgattcgttcaacttaacagcttcctgaacagcttc 501

                                                                       
Query: 453 tgcttcaacaaattcaacataagcaaaacctttaggctgcccaaacttgtcagtcaggat 512
           | ||||||  |||||||||||||| |||||||| || |||||||||||||| ||||||||
Sbjct: 500 tacttcaaggaattcaacataagcgaaaccttttggttgcccaaacttgtctgtcaggat 441

                                                                       
Query: 513 agtcacttcggttgacggttccgcaagaattaaaatgctgctgcacttcttctggagtgc 572
            |||||  | |||||| ||||| || ||||||||||||||||| ||||| ||||| ||||
Sbjct: 440 tgtcac-cctgttgaccgttccacaggaattaaaatgctgctggacttcctctggggtgc 382

                                                                       
Query: 573 atgcatagtcaacatttccaacaaaaacagaacgagaatccatctcttcttttgcttcag 632
           ||||||||||||| ||||||||| | || || ||||  ||||| || ||||||| |||||
Sbjct: 381 atgcatagtcaacgtttccaacatataccgaccgagcgtccatttcctcttttgattcag 322

                                                                       
Query: 633 atgtggtcgcattaggatctccgccttgcatctccttggcgaccttggcctgcatctcgc 692
           ||| || ||||||||||||    ||||||||||||||||||||||||| |||||||||||
Sbjct: 321 atgaggacgcattaggatccagaccttgcatctccttggcgaccttggtctgcatctcgc 262

               
Query: 693 ggag 696
           ||||
Sbjct: 261 ggag 258



to top

>ref|XM_467888.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1075

 Score =  202 bits (102), Expect = 1e-48
 Identities = 292/354 (82%), Gaps = 1/354 (0%)
 Strand = Plus / Minus

                                                                       
Query: 353 gctgcttcaacccaggaacgttagtccgcttcggtgcaaccttgatttgccgaccatgaa 412
           ||||||||| |||||| || ||||||| ||| ||||| ||||| || || |||||||| |
Sbjct: 587 gctgcttcatcccagggacattagtcctctttggtgccacctttatctgacgaccatgca 528

                                                                       
Query: 413 gctctgactcactaagcttgacagcttcctgaatagcttctgcttcaacaaattcaacat 472
           | || || ||| | |  || | ||| |||||||  ||||||  ||| | |||||| ||||
Sbjct: 527 gttcagattcattcaaattcagagcctcctgaactgcttcttgttccagaaattccacat 468

                                                                       
Query: 473 aagcaaaacctttaggctgcccaaacttgtcagtcaggatagtcacttcggttgacggtt 532
           ||||||||||||| ||||| |||||||||||||| | ||| |||||| |  ||||| || 
Sbjct: 467 aagcaaaaccttttggctgtccaaacttgtcagttaagatcgtcact-ctattgactgtg 409

                                                                       
Query: 533 ccgcaagaattaaaatgctgctgcacttcttctggagtgcatgcatagtcaacatttcca 592
           || || |  | |||||||||||||||||||||||| || |||||||| ||||||||||||
Sbjct: 408 ccacacgcttgaaaatgctgctgcacttcttctggggtacatgcataatcaacatttcca 349

                                                                       
Query: 593 acaaaaacagaacgagaatccatctcttcttttgcttcagatgtggtcgcattaggatct 652
           ||| | ||||| |||| ||||| ||  || ||||| |||| ||| | |||  ||||||||
Sbjct: 348 acatacacagatcgagcatccacctgctcctttgcctcagctgtagacgcgctaggatct 289

                                                                 
Query: 653 ccgccttgcatctccttggcgaccttggcctgcatctcgcggagggcggcggcc 706
           || |||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 288 cctccttgcatctccttggcgaccttggcctgcatgtcgcggagggccgcggcc 235



to top

>dbj|AK061269.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D06, full
           insert sequence
          Length = 1075

 Score =  202 bits (102), Expect = 1e-48
 Identities = 292/354 (82%), Gaps = 1/354 (0%)
 Strand = Plus / Minus

                                                                       
Query: 353 gctgcttcaacccaggaacgttagtccgcttcggtgcaaccttgatttgccgaccatgaa 412
           ||||||||| |||||| || ||||||| ||| ||||| ||||| || || |||||||| |
Sbjct: 587 gctgcttcatcccagggacattagtcctctttggtgccacctttatctgacgaccatgca 528

                                                                       
Query: 413 gctctgactcactaagcttgacagcttcctgaatagcttctgcttcaacaaattcaacat 472
           | || || ||| | |  || | ||| |||||||  ||||||  ||| | |||||| ||||
Sbjct: 527 gttcagattcattcaaattcagagcctcctgaactgcttcttgttccagaaattccacat 468

                                                                       
Query: 473 aagcaaaacctttaggctgcccaaacttgtcagtcaggatagtcacttcggttgacggtt 532
           ||||||||||||| ||||| |||||||||||||| | ||| |||||| |  ||||| || 
Sbjct: 467 aagcaaaaccttttggctgtccaaacttgtcagttaagatcgtcact-ctattgactgtg 409

                                                                       
Query: 533 ccgcaagaattaaaatgctgctgcacttcttctggagtgcatgcatagtcaacatttcca 592
           || || |  | |||||||||||||||||||||||| || |||||||| ||||||||||||
Sbjct: 408 ccacacgcttgaaaatgctgctgcacttcttctggggtacatgcataatcaacatttcca 349

                                                                       
Query: 593 acaaaaacagaacgagaatccatctcttcttttgcttcagatgtggtcgcattaggatct 652
           ||| | ||||| |||| ||||| ||  || ||||| |||| ||| | |||  ||||||||
Sbjct: 348 acatacacagatcgagcatccacctgctcctttgcctcagctgtagacgcgctaggatct 289

                                                                 
Query: 653 ccgccttgcatctccttggcgaccttggcctgcatctcgcggagggcggcggcc 706
           || |||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 288 cctccttgcatctccttggcgaccttggcctgcatgtcgcggagggccgcggcc 235



to top

>gb|AY109465.1| Zea mays CL6587_1 mRNA sequence
          Length = 1192

 Score =  202 bits (102), Expect = 1e-48
 Identities = 289/350 (82%), Gaps = 1/350 (0%)
 Strand = Plus / Minus

                                                                       
Query: 353 gctgcttcaacccaggaacgttagtccgcttcggtgcaaccttgatttgccgaccatgaa 412
           ||||||||| |||||| || ||||||| |||||| |||||||| || || |||||||| |
Sbjct: 569 gctgcttcatcccagggacattagtcctcttcggcgcaaccttaatctgtcgaccatgca 510

                                                                       
Query: 413 gctctgactcactaagcttgacagcttcctgaatagcttctgcttcaacaaattcaacat 472
             || || ||| | |  || | ||||||||| | |||||||  ||| | |||||||||||
Sbjct: 509 attccgattcattcaagttcagagcttcctggacagcttcttgttccagaaattcaacat 450

                                                                       
Query: 473 aagcaaaacctttaggctgcccaaacttgtcagtcaggatagtcacttcggttgacggtt 532
           ||||||||||||| |||||||||||||||||||||| ||| |||||  | |||||| |||
Sbjct: 449 aagcaaaaccttttggctgcccaaacttgtcagtcaagattgtcac-cctgttgacagtt 391

                                                                       
Query: 533 ccgcaagaattaaaatgctgctgcacttcttctggagtgcatgcatagtcaacatttcca 592
           || ||||  |  |||||||| |||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 390 ccacaagcttggaaatgctgttgcacttcttctggggtgcaagcataatcaacatttcca 331

                                                                       
Query: 593 acaaaaacagaacgagaatccatctcttcttttgcttcagatgtggtcgcattaggatct 652
           ||| | |||||||| | ||||| ||  || || || |||| ||| |  | | |||| || 
Sbjct: 330 acatacacagaacgggcatccacctgctccttcgcctcagctgtagatgtactagggtca 271

                                                             
Query: 653 ccgccttgcatctccttggcgaccttggcctgcatctcgcggagggcggc 702
           || |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 270 cctccttgcatctccttggcgaccttggcctgcatatcgcggagggcggc 221



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  165 bits (83), Expect = 2e-37
 Identities = 168/195 (86%), Gaps = 1/195 (0%)
 Strand = Plus / Minus

                                                                           
Query: 391     accttgatttgccgaccatgaagctctgactcactaagcttgacagcttcctgaatagct 450
               ||||||||||| |||||||| || ||||| ||  | | ||| ||||||||||||| ||||
Sbjct: 6170066 accttgatttggcgaccatgcagttctgattcgttcaacttaacagcttcctgaacagct 6170007

                                                                           
Query: 451     tctgcttcaacaaattcaacataagcaaaacctttaggctgcccaaacttgtcagtcagg 510
               ||| ||||||  |||||||||||||| |||||||| || |||||||||||||| ||||||
Sbjct: 6170006 tctacttcaaggaattcaacataagcgaaaccttttggttgcccaaacttgtctgtcagg 6169947

                                                                           
Query: 511     atagtcacttcggttgacggttccgcaagaattaaaatgctgctgcacttcttctggagt 570
               || |||||  | |||||| ||||| || ||||||||||||||||| ||||| ||||| ||
Sbjct: 6169946 attgtcac-cctgttgaccgttccacaggaattaaaatgctgctggacttcctctggggt 6169888

                              
Query: 571     gcatgcatagtcaac 585
               |||||||||||||||
Sbjct: 6169887 gcatgcatagtcaac 6169873



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                        
Query: 656     ccttgcatctccttggcgaccttggcctgcatctcgcggag 696
               ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 6167174 ccttgcatctccttggcgaccttggtctgcatctcgcggag 6167134



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                              
Query: 333     gaatcctcggccccctcggggctgcttcaacccaggaacgttagtcc 379
               |||||||| ||| || ||||||||||||| |||||| ||||||||||
Sbjct: 6170227 gaatcctctgcctccgcggggctgcttcatcccagggacgttagtcc 6170181



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                        
Query: 611     tccatctcttcttttgcttcagatgtggtcgcattaggatc 651
               ||||| || ||||||| |||||||| || ||||||||||||
Sbjct: 6168614 tccatttcctcttttgattcagatgaggacgcattaggatc 6168574



to top

>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0436F11
          Length = 165550

 Score =  165 bits (83), Expect = 2e-37
 Identities = 168/195 (86%), Gaps = 1/195 (0%)
 Strand = Plus / Minus

                                                                         
Query: 391   accttgatttgccgaccatgaagctctgactcactaagcttgacagcttcctgaatagct 450
             ||||||||||| |||||||| || ||||| ||  | | ||| ||||||||||||| ||||
Sbjct: 83885 accttgatttggcgaccatgcagttctgattcgttcaacttaacagcttcctgaacagct 83826

                                                                         
Query: 451   tctgcttcaacaaattcaacataagcaaaacctttaggctgcccaaacttgtcagtcagg 510
             ||| ||||||  |||||||||||||| |||||||| || |||||||||||||| ||||||
Sbjct: 83825 tctacttcaaggaattcaacataagcgaaaccttttggttgcccaaacttgtctgtcagg 83766

                                                                         
Query: 511   atagtcacttcggttgacggttccgcaagaattaaaatgctgctgcacttcttctggagt 570
             || |||||  | |||||| ||||| || ||||||||||||||||| ||||| ||||| ||
Sbjct: 83765 attgtcac-cctgttgaccgttccacaggaattaaaatgctgctggacttcctctggggt 83707

                            
Query: 571   gcatgcatagtcaac 585
             |||||||||||||||
Sbjct: 83706 gcatgcatagtcaac 83692



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                      
Query: 656   ccttgcatctccttggcgaccttggcctgcatctcgcggag 696
             ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 80993 ccttgcatctccttggcgaccttggtctgcatctcgcggag 80953



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 333   gaatcctcggccccctcggggctgcttcaacccaggaacgttagtcc 379
             |||||||| ||| || ||||||||||||| |||||| ||||||||||
Sbjct: 84046 gaatcctctgcctccgcggggctgcttcatcccagggacgttagtcc 84000



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 611   tccatctcttcttttgcttcagatgtggtcgcattaggatc 651
             ||||| || ||||||| |||||||| || ||||||||||||
Sbjct: 82433 tccatttcctcttttgattcagatgaggacgcattaggatc 82393



to top

>ref|XM_467889.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 963

 Score =  123 bits (62), Expect = 8e-25
 Identities = 213/262 (81%), Gaps = 1/262 (0%)
 Strand = Plus / Minus

                                                                       
Query: 353 gctgcttcaacccaggaacgttagtccgcttcggtgcaaccttgatttgccgaccatgaa 412
           ||||||||| |||||| || ||||||| ||| ||||| ||||| || || |||||||| |
Sbjct: 565 gctgcttcatcccagggacattagtcctctttggtgccacctttatctgacgaccatgca 506

                                                                       
Query: 413 gctctgactcactaagcttgacagcttcctgaatagcttctgcttcaacaaattcaacat 472
           | || || ||| | |  || | ||| |||||||  ||||||  ||| | |||||| ||||
Sbjct: 505 gttcagattcattcaaattcagagcctcctgaactgcttcttgttccagaaattccacat 446

                                                                       
Query: 473 aagcaaaacctttaggctgcccaaacttgtcagtcaggatagtcacttcggttgacggtt 532
           ||||||||||||| ||||| |||||||||||||| | ||| |||||| |  ||||| || 
Sbjct: 445 aagcaaaaccttttggctgtccaaacttgtcagttaagatcgtcact-ctattgactgtg 387

                                                                       
Query: 533 ccgcaagaattaaaatgctgctgcacttcttctggagtgcatgcatagtcaacatttcca 592
           || || |  | |||||||||||||||||||||||| || |||||||| ||||||||||||
Sbjct: 386 ccacacgcttgaaaatgctgctgcacttcttctggggtacatgcataatcaacatttcca 327

                                 
Query: 593 acaaaaacagaacgagaatcca 614
           ||| | ||||| |||| |||||
Sbjct: 326 acatacacagatcgagcatcca 305



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                              
Query: 656 ccttgcatctccttggcgaccttggcctgcatctcgcggagggcggcggcc 706
           |||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 251 ccttgcatctccttggcgaccttggcctgcatgtcgcggagggccgcggcc 201



to top

>dbj|AK071146.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081D16, full
           insert sequence
          Length = 963

 Score =  123 bits (62), Expect = 8e-25
 Identities = 213/262 (81%), Gaps = 1/262 (0%)
 Strand = Plus / Minus

                                                                       
Query: 353 gctgcttcaacccaggaacgttagtccgcttcggtgcaaccttgatttgccgaccatgaa 412
           ||||||||| |||||| || ||||||| ||| ||||| ||||| || || |||||||| |
Sbjct: 565 gctgcttcatcccagggacattagtcctctttggtgccacctttatctgacgaccatgca 506

                                                                       
Query: 413 gctctgactcactaagcttgacagcttcctgaatagcttctgcttcaacaaattcaacat 472
           | || || ||| | |  || | ||| |||||||  ||||||  ||| | |||||| ||||
Sbjct: 505 gttcagattcattcaaattcagagcctcctgaactgcttcttgttccagaaattccacat 446

                                                                       
Query: 473 aagcaaaacctttaggctgcccaaacttgtcagtcaggatagtcacttcggttgacggtt 532
           ||||||||||||| ||||| |||||||||||||| | ||| |||||| |  ||||| || 
Sbjct: 445 aagcaaaaccttttggctgtccaaacttgtcagttaagatcgtcact-ctattgactgtg 387

                                                                       
Query: 533 ccgcaagaattaaaatgctgctgcacttcttctggagtgcatgcatagtcaacatttcca 592
           || || |  | |||||||||||||||||||||||| || |||||||| ||||||||||||
Sbjct: 386 ccacacgcttgaaaatgctgctgcacttcttctggggtacatgcataatcaacatttcca 327

                                 
Query: 593 acaaaaacagaacgagaatcca 614
           ||| | ||||| |||| |||||
Sbjct: 326 acatacacagatcgagcatcca 305



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                              
Query: 656 ccttgcatctccttggcgaccttggcctgcatctcgcggagggcggcggcc 706
           |||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 251 ccttgcatctccttggcgaccttggcctgcatgtcgcggagggccgcggcc 201



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 105/124 (84%), Gaps = 1/124 (0%)
 Strand = Plus / Plus

                                                                            
Query: 462      aaattcaacataagcaaaacctttaggctgcccaaacttgtcagtcaggatagtcacttc 521
                |||||| ||||||||||||||||| ||||| |||||||||||||| | ||| ||||| ||
Sbjct: 31935397 aaattccacataagcaaaaccttttggctgtccaaacttgtcagttaagatcgtcac-tc 31935455

                                                                            
Query: 522      ggttgacggttccgcaagaattaaaatgctgctgcacttcttctggagtgcatgcatagt 581
                  ||||| || || || |  | |||||||||||||||||||||||| || |||||||| |
Sbjct: 31935456 tattgactgtgccacacgcttgaaaatgctgctgcacttcttctggggtacatgcataat 31935515

                    
Query: 582      caac 585
                ||||
Sbjct: 31935516 caac 31935519



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 49/51 (96%)
 Strand = Plus / Plus

                                                                   
Query: 656      ccttgcatctccttggcgaccttggcctgcatctcgcggagggcggcggcc 706
                |||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 31938719 ccttgcatctccttggcgaccttggcctgcatgtcgcggagggccgcggcc 31938769



to top

>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0471A11
          Length = 157740

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 105/124 (84%), Gaps = 1/124 (0%)
 Strand = Plus / Plus

                                                                         
Query: 462   aaattcaacataagcaaaacctttaggctgcccaaacttgtcagtcaggatagtcacttc 521
             |||||| ||||||||||||||||| ||||| |||||||||||||| | ||| ||||| ||
Sbjct: 96398 aaattccacataagcaaaaccttttggctgtccaaacttgtcagttaagatcgtcac-tc 96456

                                                                         
Query: 522   ggttgacggttccgcaagaattaaaatgctgctgcacttcttctggagtgcatgcatagt 581
               ||||| || || || |  | |||||||||||||||||||||||| || |||||||| |
Sbjct: 96457 tattgactgtgccacacgcttgaaaatgctgctgcacttcttctggggtacatgcataat 96516

                 
Query: 582   caac 585
             ||||
Sbjct: 96517 caac 96520



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 49/51 (96%)
 Strand = Plus / Plus

                                                                
Query: 656   ccttgcatctccttggcgaccttggcctgcatctcgcggagggcggcggcc 706
             |||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 99720 ccttgcatctccttggcgaccttggcctgcatgtcgcggagggccgcggcc 99770



to top

>ref|NM_124491.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT5G51120
           mRNA, complete cds
          Length = 1053

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 441 ctgaatagcttctgcttcaacaaattcaacataagcaaaacctttaggctgcccaaactt 500
           ||||| ||||||| |||| |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 551 ctgaacagcttctacttccacaaattcgacatacgcaaaacctttaggttgaccaaactt 492

                    
Query: 501 gtcagtcag 509
            || |||||
Sbjct: 491 atctgtcag 483



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 544 aaaatgctgctgcacttcttctggagtgcatgcatagtcaacatttccaaca 595
           |||||||||||| ||||| |||||||| ||||||||||| ||||| ||||||
Sbjct: 449 aaaatgctgctggacttcctctggagtacatgcatagtccacattgccaaca 398



to top

>gb|BT014077.1| Lycopersicon esculentum clone 133177F, mRNA sequence
          Length = 1196

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                       
Query: 455 cttcaacaaattcaacataagcaaaacctttaggctgcccaaacttgtcagtcaggatag 514
           ||||||| ||||| ||||| ||| ||||||| ||||| ||||||||||| ||||||||||
Sbjct: 592 cttcaacgaattcgacataggcataacctttgggctggccaaacttgtctgtcaggatag 533

            
Query: 515 t 515
           |
Sbjct: 532 t 532



to top

>gb|AY116673.1| Arabidopsis thaliana unknown protein (At5g51120) mRNA, complete cds
          Length = 941

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 441 ctgaatagcttctgcttcaacaaattcaacataagcaaaacctttaggctgcccaaactt 500
           ||||| ||||||| |||| |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 514 ctgaacagcttctacttccacaaattcgacatacgcaaaacctttaggttgaccaaactt 455

                    
Query: 501 gtcagtcag 509
            || |||||
Sbjct: 454 atctgtcag 446



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 544 aaaatgctgctgcacttcttctggagtgcatgcatagtcaacatttccaaca 595
           |||||||||||| ||||| |||||||| ||||||||||| ||||| ||||||
Sbjct: 412 aaaatgctgctggacttcctctggagtacatgcatagtccacattgccaaca 361



to top

>gb|AY079392.1| Arabidopsis thaliana unknown protein (At5g51120) mRNA, complete cds
          Length = 715

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 441 ctgaatagcttctgcttcaacaaattcaacataagcaaaacctttaggctgcccaaactt 500
           ||||| ||||||| |||| |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 471 ctgaacagcttctacttccacaaattcgacatacgcaaaacctttaggttgaccaaactt 412

                    
Query: 501 gtcagtcag 509
            || |||||
Sbjct: 411 atctgtcag 403



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 544 aaaatgctgctgcacttcttctggagtgcatgcatagtcaacatttccaaca 595
           |||||||||||| ||||| |||||||| ||||||||||| ||||| ||||||
Sbjct: 369 aaaatgctgctggacttcctctggagtacatgcatagtccacattgccaaca 318



to top

>gb|AY057580.1| Arabidopsis thaliana unknown protein (At5g51120) mRNA, complete cds
          Length = 992

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 441 ctgaatagcttctgcttcaacaaattcaacataagcaaaacctttaggctgcccaaactt 500
           ||||| ||||||| |||| |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 517 ctgaacagcttctacttccacaaattcgacatacgcaaaacctttaggttgaccaaactt 458

                    
Query: 501 gtcagtcag 509
            || |||||
Sbjct: 457 atctgtcag 449



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 544 aaaatgctgctgcacttcttctggagtgcatgcatagtcaacatttccaaca 595
           |||||||||||| ||||| |||||||| ||||||||||| ||||| ||||||
Sbjct: 415 aaaatgctgctggacttcctctggagtacatgcatagtccacattgccaaca 364



to top

>gb|AY054186.1| Arabidopsis thaliana AT5g51120/MWD22_6 mRNA, complete cds
          Length = 994

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 441 ctgaatagcttctgcttcaacaaattcaacataagcaaaacctttaggctgcccaaactt 500
           ||||| ||||||| |||| |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 530 ctgaacagcttctacttccacaaattcgacatacgcaaaacctttaggttgaccaaactt 471

                    
Query: 501 gtcagtcag 509
            || |||||
Sbjct: 470 atctgtcag 462



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 544 aaaatgctgctgcacttcttctggagtgcatgcatagtcaacatttccaaca 595
           |||||||||||| ||||| |||||||| ||||||||||| ||||| ||||||
Sbjct: 428 aaaatgctgctggacttcctctggagtacatgcatagtccacattgccaaca 377



to top

>gb|AY084464.1| Arabidopsis thaliana clone 10876 mRNA, complete sequence
          Length = 1078

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 441 ctgaatagcttctgcttcaacaaattcaacataagcaaaacctttaggctgcccaaactt 500
           ||||| ||||||| |||| |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 551 ctgaacagcttctacttccacaaattcgacatacgcaaaacctttaggttgaccaaactt 492

                    
Query: 501 gtcagtcag 509
            || |||||
Sbjct: 491 atctgtcag 483



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 544 aaaatgctgctgcacttcttctggagtgcatgcatagtcaacatttccaaca 595
           |||||||||||| ||||| |||||||| ||||||||||| ||||| ||||||
Sbjct: 449 aaaatgctgctggacttcctctggagtacatgcatagtccacattgccaaca 398



to top

>dbj|AB023044.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWD22
          Length = 87180

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                         
Query: 441   ctgaatagcttctgcttcaacaaattcaacataagcaaaacctttaggctgcccaaactt 500
             ||||| ||||||| |||| |||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 14605 ctgaacagcttctacttccacaaattcgacatacgcaaaacctttaggttgaccaaactt 14546

                      
Query: 501   gtcagtcag 509
              || |||||
Sbjct: 14545 atctgtcag 14537



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                    
Query: 544   aaaatgctgctgcacttcttctggagtgcatgcatagtc 582
             |||||||||||| ||||| |||||||| |||||||||||
Sbjct: 14503 aaaatgctgctggacttcctctggagtacatgcatagtc 14465



to top

>gb|AC121245.17| Medicago truncatula clone mth2-33g3, complete sequence
          Length = 125763

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 114/141 (80%), Gaps = 1/141 (0%)
 Strand = Plus / Minus

                                                                         
Query: 442   tgaatagcttctgcttcaacaaattcaacataagcaaaacctttaggctgcccaaacttg 501
             |||| ||||||| |||| |||||||| ||||||||| |||| || || || |||||||| 
Sbjct: 92041 tgaacagcttctacttcgacaaattctacataagcataacccttgggttggccaaactta 91982

                                                                         
Query: 502   tcagtcaggatagtcacttcggttgacggttccgcaagaattaaaatgctgctgcacttc 561
             |||||  | ||||| ||  ||||| || || || || || |  |||||||||||||| ||
Sbjct: 91981 tcagtgcgaatagtaaca-cggtttacagtaccacacgattggaaatgctgctgcacgtc 91923

                                  
Query: 562   ttctggagtgcatgcatagtc 582
             ||| ||||| |||||||||||
Sbjct: 91922 ttcaggagtacatgcatagtc 91902



to top

>ref|NM_125924.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT5G65260
           mRNA, complete cds
          Length = 966

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 545 aaatgctgctgcacttcttctggagtgcatgcatagtcaacatttccaacaaaaac 600
           ||||||||||| |||||||| || ||||| || || |||||||| |||||||||||
Sbjct: 368 aaatgctgctgaacttcttcaggtgtgcaagcgtaatcaacattgccaacaaaaac 313



to top

>gb|BT000018.1| Arabidopsis thaliana poly(A)-binding protein II-like (At5g65260)
           mRNA, complete cds
          Length = 744

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 545 aaatgctgctgcacttcttctggagtgcatgcatagtcaacatttccaacaaaaac 600
           ||||||||||| |||||||| || ||||| || || |||||||| |||||||||||
Sbjct: 335 aaatgctgctgaacttcttcaggtgtgcaagcgtaatcaacattgccaacaaaaac 280



to top

>gb|AF386984.1|AF386984 Arabidopsis thaliana poly(A)-binding protein II-like (MQN23.20)
           mRNA, complete cds
          Length = 929

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 545 aaatgctgctgcacttcttctggagtgcatgcatagtcaacatttccaacaaaaac 600
           ||||||||||| |||||||| || ||||| || || |||||||| |||||||||||
Sbjct: 368 aaatgctgctgaacttcttcaggtgtgcaagcgtaatcaacattgccaacaaaaac 313



to top

>emb|BX830904.1|CNS09YS7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS38ZF12 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 805

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 545 aaatgctgctgcacttcttctggagtgcatgcatagtcaacatttccaacaaaaac 600
           ||||||||||| |||||||| || ||||| || || |||||||| |||||||||||
Sbjct: 214 aaatgctgctgaacttcttcaggtgtgcaagcgtaatcaacattgccaacaaaaac 159



to top

>ref|NM_121073.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT5G10350
           transcript variant AT5G10350.1 mRNA, complete cds
          Length = 881

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 82/101 (81%)
 Strand = Plus / Minus

                                                                       
Query: 403 cgaccatgaagctctgactcactaagcttgacagcttcctgaatagcttctgcttcaaca 462
           ||||||||||||||||| ||| | ||||  | |||||| || |  |||||  |||| |||
Sbjct: 494 cgaccatgaagctctgattcattcagctgcagagcttcttgcacggcttccacttctaca 435

                                                    
Query: 463 aattcaacataagcaaaacctttaggctgcccaaacttgtc 503
           || || ||||||||||| || || ||||| |||||||||||
Sbjct: 434 aactccacataagcaaatccctttggctgtccaaacttgtc 394



to top

>ref|NM_180472.1| Arabidopsis thaliana RNA binding / nucleic acid binding AT5G10350
           transcript variant AT5G10350.2 mRNA, complete cds
          Length = 1006

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 82/101 (81%)
 Strand = Plus / Minus

                                                                       
Query: 403 cgaccatgaagctctgactcactaagcttgacagcttcctgaatagcttctgcttcaaca 462
           ||||||||||||||||| ||| | ||||  | |||||| || |  |||||  |||| |||
Sbjct: 494 cgaccatgaagctctgattcattcagctgcagagcttcttgcacggcttccacttctaca 435

                                                    
Query: 463 aattcaacataagcaaaacctttaggctgcccaaacttgtc 503
           || || ||||||||||| || || ||||| |||||||||||
Sbjct: 434 aactccacataagcaaatccctttggctgtccaaacttgtc 394



to top

>emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, BAC clone F12B17 (ESSA project)
          Length = 113053

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 82/101 (81%)
 Strand = Plus / Minus

                                                                          
Query: 403    cgaccatgaagctctgactcactaagcttgacagcttcctgaatagcttctgcttcaaca 462
              ||||||||||||||||| ||| | ||||  | |||||| || |  |||||  |||| |||
Sbjct: 108829 cgaccatgaagctctgattcattcagctgcagagcttcttgcacggcttccacttctaca 108770

                                                       
Query: 463    aattcaacataagcaaaacctttaggctgcccaaacttgtc 503
              || || ||||||||||| || || ||||| |||||||||||
Sbjct: 108769 aactccacataagcaaatccctttggctgtccaaacttgtc 108729



to top

>emb|BX829898.1|CNS0A187 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB44ZG03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 501

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 82/101 (81%)
 Strand = Plus / Minus

                                                                       
Query: 403 cgaccatgaagctctgactcactaagcttgacagcttcctgaatagcttctgcttcaaca 462
           ||||||||||||||||| ||| | ||||  | |||||| || |  |||||  |||| |||
Sbjct: 140 cgaccatgaagctctgattcattcagctgcagagcttcttgcacggcttccacttctaca 81

                                                    
Query: 463 aattcaacataagcaaaacctttaggctgcccaaacttgtc 503
           || || ||||||||||| || || ||||| |||||||||||
Sbjct: 80  aactccacataagcaaatccctttggctgtccaaacttgtc 40



to top

>emb|BX829525.1|CNS0A1G5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB19ZA11 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1847

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 82/101 (81%)
 Strand = Plus / Minus

                                                                        
Query: 403  cgaccatgaagctctgactcactaagcttgacagcttcctgaatagcttctgcttcaaca 462
            ||||||||||||||||| ||| | ||||  | |||||| || |  |||||  |||| |||
Sbjct: 1511 cgaccatgaagctctgattcattcagctgcagagcttcttgcacggcttccacttctaca 1452

                                                     
Query: 463  aattcaacataagcaaaacctttaggctgcccaaacttgtc 503
            || || ||||||||||| || || ||||| |||||||||||
Sbjct: 1451 aactccacataagcaaatccctttggctgtccaaacttgtc 1411



to top

>gb|BT005003.1| Arabidopsis thaliana clone U20623 putative polyadenylate-binding
           protein II (PAB2) (At5g10350) mRNA, complete cds
          Length = 685

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 82/101 (81%)
 Strand = Plus / Minus

                                                                       
Query: 403 cgaccatgaagctctgactcactaagcttgacagcttcctgaatagcttctgcttcaaca 462
           ||||||||||||||||| ||| | ||||  | |||||| || |  |||||  |||| |||
Sbjct: 467 cgaccatgaagctctgattcattcagctgcagagcttcttgcacggcttccacttctaca 408

                                                    
Query: 463 aattcaacataagcaaaacctttaggctgcccaaacttgtc 503
           || || ||||||||||| || || ||||| |||||||||||
Sbjct: 407 aactccacataagcaaatccctttggctgtccaaacttgtc 367



to top

>gb|BT003893.1| Arabidopsis thaliana clone RAFL15-13-K12 (R20623) putative
           polyadenylate-binding protein II (PAB2) (At5g10350)
           mRNA, complete cds
          Length = 889

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 82/101 (81%)
 Strand = Plus / Minus

                                                                       
Query: 403 cgaccatgaagctctgactcactaagcttgacagcttcctgaatagcttctgcttcaaca 462
           ||||||||||||||||| ||| | ||||  | |||||| || |  |||||  |||| |||
Sbjct: 494 cgaccatgaagctctgattcattcagctgcagagcttcttgcacggcttccacttctaca 435

                                                    
Query: 463 aattcaacataagcaaaacctttaggctgcccaaacttgtc 503
           || || ||||||||||| || || ||||| |||||||||||
Sbjct: 434 aactccacataagcaaatccctttggctgtccaaacttgtc 394



to top

>gb|AC114699.5| Rattus norvegicus 19 BAC CH230-235A3 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 224930

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 11     ttgattgctaagtnaatgtacataa 35
              ||||||||||||| |||||||||||
Sbjct: 105488 ttgattgctaagtcaatgtacataa 105512



to top

>gb|AC102288.11| Mus musculus chromosome 18, clone RP24-346H24, complete sequence
          Length = 154552

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 252    gggagctctcccataaccacc 272
              |||||||||||||||||||||
Sbjct: 143694 gggagctctcccataaccacc 143674



to top

>gb|AF488416.1| Zea mays chromosome 9 BAC 9C20 complete sequence
          Length = 143300

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 676    cttggcctgcatctcgcggag 696
              |||||||||||||||||||||
Sbjct: 137738 cttggcctgcatctcgcggag 137758



to top

>gb|AC101777.8| Mus musculus chromosome 1, clone RP24-123J3, complete sequence
          Length = 177788

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 609    aatccatctcttcttttgctt 629
              |||||||||||||||||||||
Sbjct: 169253 aatccatctcttcttttgctt 169233



to top

>gb|AE006255.1| Lactococcus lactis subsp. lactis IL1403 section 17 of 218 of the
            complete genome
          Length = 10098

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1    tatccgtgacttgattgctaa 21
            |||||||||||||||||||||
Sbjct: 2360 tatccgtgacttgattgctaa 2380



to top

>gb|AC004851.2| Homo sapiens PAC clone RP4-665P5 from 7, complete sequence
          Length = 71627

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 598   aacagaacgagaatccatctc 618
             |||||||||||||||||||||
Sbjct: 61143 aacagaacgagaatccatctc 61163



to top

>gb|AC091296.3| Pan troglodytes clone RP43-109G19, complete sequence
          Length = 185979

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 598   aacagaacgagaatccatctc 618
             |||||||||||||||||||||
Sbjct: 66104 aacagaacgagaatccatctc 66084



to top

>gb|AC011478.3| Homo sapiens chromosome 19 clone CTC-565M22, complete sequence
          Length = 100147

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 598   aacagaacgagaatccatctc 618
             |||||||||||||||||||||
Sbjct: 51399 aacagaacgagaatccatctc 51379



to top

>gb|AC011477.5| Homo sapiens chromosome 19 clone CTC-559E9, complete sequence
          Length = 178710

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 598    aacagaacgagaatccatctc 618
              |||||||||||||||||||||
Sbjct: 105798 aacagaacgagaatccatctc 105778



to top

>gb|AC131072.13| Mus musculus chromosome 1, clone RP23-396F21, complete sequence
          Length = 192542

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 609    aatccatctcttcttttgctt 629
              |||||||||||||||||||||
Sbjct: 161469 aatccatctcttcttttgctt 161489



to top

>gb|AC027229.17| Homo sapiens chromosome 18, clone RP11-737G21, complete sequence
          Length = 61501

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 598   aacagaacgagaatccatctc 618
             |||||||||||||||||||||
Sbjct: 23857 aacagaacgagaatccatctc 23837



to top

>gb|AC021302.11| Homo sapiens chromosome 18, clone RP11-203G13, complete sequence
          Length = 168535

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 598    aacagaacgagaatccatctc 618
              |||||||||||||||||||||
Sbjct: 147370 aacagaacgagaatccatctc 147390



to top

>gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1), unknown (Z438D03.5),
              epsilon-COP (Z438D03.6), putative kinase (Z438D03.7),
              unknown (Z438D03.25), and C1-B73 (Z438D03.27) genes,
              complete cds
          Length = 185988

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 676    cttggcctgcatctcgcggag 696
              |||||||||||||||||||||
Sbjct: 110252 cttggcctgcatctcgcggag 110272



to top

>dbj|AK061346.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-E12, full
           insert sequence
          Length = 1165

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 659 tgcatctccttggcgaccttg 679
           |||||||||||||||||||||
Sbjct: 667 tgcatctccttggcgaccttg 647



to top

>gb|AC004168.2|AC004168 Homo sapiens chromosome 4 clone B159L21 map 4q25, complete sequence
          Length = 185566

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 535   gcaagaattaaaatgctgctg 555
             |||||||||||||||||||||
Sbjct: 93057 gcaagaattaaaatgctgctg 93077



to top

>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome
          Length = 1796226

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 445    atagcttctgcttcaacaaattca 468
              ||||||||||||||||||| ||||
Sbjct: 559269 atagcttctgcttcaacaacttca 559246



to top

>ref|XM_366814.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
            (MG02890.4) partial mRNA
          Length = 1854

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 398  tttgccgaccatgaagctct 417
            ||||||||||||||||||||
Sbjct: 1128 tttgccgaccatgaagctct 1109



to top

>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 672    cgaccttggcctgcatctcgcgga 695
              ||||||||||| ||||||||||||
Sbjct: 466956 cgaccttggccagcatctcgcgga 466979



to top

>gb|AY574035.1| Zea mays rust resistance protein rp3-1 (rp3-1) gene, complete cds; and
              truncated rust resistance protein rp3-2t (rp3-2) gene,
              complete sequence
          Length = 276326

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 676    cttggcctgcatctcgcgga 695
              ||||||||||||||||||||
Sbjct: 248099 cttggcctgcatctcgcgga 248118



to top

>gb|AY316747.1| Rhizobium sp. NGR234 megaplasmid 2 contig 1, complete sequence
          Length = 357655

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 662    atctccttggcgaccttggc 681
              ||||||||||||||||||||
Sbjct: 305671 atctccttggcgaccttggc 305652



to top

>emb|CR954256.1| Anopheles gambiae Pen-1 region; BAC clones 30N20, 10K02, 13E09, 31J16 and
              01G10 from library NotreDame1 of Anopheles gambiae (African
              malaria mosquito) strain PEST
          Length = 447895

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 642    cattaggatctccgccttgcatct 665
              ||||||| ||||||||||||||||
Sbjct: 337815 cattaggttctccgccttgcatct 337838



to top

>gb|AC087728.3| Papio anubis clone RP41-340H23, complete sequence
          Length = 198888

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 599    acagaacgagaatccatctc 618
              ||||||||||||||||||||
Sbjct: 141336 acagaacgagaatccatctc 141317



to top

>ref|XM_651341.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (12.t00054)
           partial mRNA
          Length = 837

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 81  gattacacaacaaccatcac 100
           ||||||||||||||||||||
Sbjct: 453 gattacacaacaaccatcac 472



to top

>gb|AC009508.3| Homo sapiens BAC clone RP11-564N1 from 7, complete sequence
          Length = 119414

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 537  aagaattaaaatgctgctgcactt 560
            ||||||||||||||||||| ||||
Sbjct: 5189 aagaattaaaatgctgctgaactt 5212



to top

>gb|AC146050.3| Pan troglodytes BAC clone RP43-72L14 from 7, complete sequence
          Length = 154653

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 537    aagaattaaaatgctgctgcactt 560
              ||||||||||||||||||| ||||
Sbjct: 149518 aagaattaaaatgctgctgaactt 149541



to top

>gb|AC091763.25| Mus musculus strain C57BL/6J clone rp23-198o2 map 10, complete sequence
          Length = 221545

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 446   tagcttctgcttcaacaaat 465
             ||||||||||||||||||||
Sbjct: 25685 tagcttctgcttcaacaaat 25666



to top

>gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume architecture 1 (tga1)
             gene, complete cds
          Length = 169976

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 676   cttggcctgcatctcgcgga 695
             ||||||||||||||||||||
Sbjct: 68214 cttggcctgcatctcgcgga 68195



to top

>emb|BX927225.7| Zebrafish DNA sequence from clone CH211-106F9 in linkage group 6,
             complete sequence
          Length = 161068

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 176   tagttttgtcatgtgttgacaaaa 199
             ||||||| ||||||||||||||||
Sbjct: 73119 tagttttatcatgtgttgacaaaa 73142



to top

>gb|AC165173.2| Zea mays clone ZMMBBb-125O19, complete sequence
          Length = 157660

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 676    cttggcctgcatctcgcgga 695
              ||||||||||||||||||||
Sbjct: 129567 cttggcctgcatctcgcgga 129586



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 676   cttggcctgcatctcgcgga 695
             ||||||||||||||||||||
Sbjct: 49104 cttggcctgcatctcgcgga 49085



to top

>emb|AL139819.8| Human DNA sequence from clone RP11-34D15 on chromosome 10 Contains the 5'
              end of gene FLJ30135, the PKD2L1 gene for polycystic kidney
              disease 2-like 1, the SCD gene for stearoyl-CoA desaturase
              (delta-9-desturase), two novel genes and two CpG islands,
              complete sequence
          Length = 115278

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 423    actaagcttgacagcttcct 442
              ||||||||||||||||||||
Sbjct: 101487 actaagcttgacagcttcct 101506



to top

>emb|AL157694.7| Human DNA sequence from clone RP11-157B21 on chromosome 13q12.2-13.3
             Contains part of the DCAMKL1 gene for doublecortin and CaM
             kinase-like 1 (DCLK KIAA0369), complete sequence
          Length = 76339

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 461   caaattcaacataagcaaaa 480
             ||||||||||||||||||||
Sbjct: 17184 caaattcaacataagcaaaa 17165



to top

>gb|AC166741.1| Brassica rapa subsp. pekinensis clone KBrH080C09, complete sequence
          Length = 132099

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 674   accttggcctgcatctcgcg 693
             ||||||||||||||||||||
Sbjct: 10017 accttggcctgcatctcgcg 9998



to top

>emb|AL596169.1| Listeria innocua Clip11262 complete genome, segment 7/12
          Length = 239050

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 585   catttccaacaaaaacagaacgag 608
             ||||| ||||||||||||||||||
Sbjct: 84252 catttacaacaaaaacagaacgag 84275



to top

>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 549     gctgctgcacttcttctgga 568
               ||||||||||||||||||||
Sbjct: 3225418 gctgctgcacttcttctgga 3225437



to top

>gb|AC025647.9| Homo sapiens, clone RP11-316J7, complete sequence
          Length = 155663

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 599   acagaacgagaatccatctc 618
             ||||||||||||||||||||
Sbjct: 83143 acagaacgagaatccatctc 83162



to top

>gb|AC090403.8| Homo sapiens chromosome 18, clone RP11-739N10, complete sequence
          Length = 181250

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 611   tccatctcttcttttgcttc 630
             ||||||||||||||||||||
Sbjct: 87904 tccatctcttcttttgcttc 87923



to top

>gb|AC083837.4| Homo sapiens chromosome 8, clone RP11-79H23, complete sequence
          Length = 166114

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 437    cttcctgaatagcttctgct 456
              ||||||||||||||||||||
Sbjct: 124599 cttcctgaatagcttctgct 124618



to top

>gb|AC022176.6| Homo sapiens chromosome , clone RP11-149C3, complete sequence
          Length = 184026

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 611    tccatctcttcttttgcttc 630
              ||||||||||||||||||||
Sbjct: 179268 tccatctcttcttttgcttc 179287



to top

>ref|NM_001021695.1| Schizosaccharomyces pombe 972h- hypothetical protein
           (SPBC16E9.12c), partial mRNA
          Length = 501

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 364 ccaggaacgttagtccgcttcggtgcaacctt 395
           ||||||||||| |||||||| |||| ||||||
Sbjct: 407 ccaggaacgtttgtccgcttgggtgtaacctt 376



to top

>gb|AC153546.10| Mus musculus 10 BAC RP23-356P21 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 207122

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 446   tagcttctgcttcaacaaat 465
             ||||||||||||||||||||
Sbjct: 30002 tagcttctgcttcaacaaat 30021



to top

>gb|AF546189.1| Contiguous genomic DNA sequence comprising the 19-kDa-zein gene family
             from Zea mays, complete sequence
          Length = 116115

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 676   cttggcctgcatctcgcgga 695
             ||||||||||||||||||||
Sbjct: 90249 cttggcctgcatctcgcgga 90268



to top

>gb|AY555143.1| Zea may BAC clone c573L14, complete sequence
          Length = 144792

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 676   cttggcctgcatctcgcgga 695
             ||||||||||||||||||||
Sbjct: 95246 cttggcctgcatctcgcgga 95227



to top

>emb|AL590148.8| Zebrafish DNA sequence from clone RP71-30I22 in linkage group 8 Contains
              part of a novel gene for a protein similar to human
              FLJ12550, the pim1 gene for pim-1 oncogene (proviral
              integration site 1), part of a novel gene for a protein
              similar to vertebrate UDP-galactose transporters, a novel
              gene for a protein similar to vertebrate caldesmon 1
              (CALD1) and a CpG island, complete sequence
          Length = 140984

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 582    caacatttccaacaaaaaca 601
              ||||||||||||||||||||
Sbjct: 140696 caacatttccaacaaaaaca 140677



to top

>dbj|AP001359.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-820L6, complete
             sequences
          Length = 221535

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 599   acagaacgagaatccatctc 618
             ||||||||||||||||||||
Sbjct: 47384 acagaacgagaatccatctc 47403



to top

>dbj|AP001924.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-166D19, complete
              sequence
          Length = 190360

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 599    acagaacgagaatccatctc 618
              ||||||||||||||||||||
Sbjct: 129023 acagaacgagaatccatctc 129042



to top

>dbj|AP003474.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1942A3, complete
              sequence
          Length = 165901

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 599    acagaacgagaatccatctc 618
              ||||||||||||||||||||
Sbjct: 135024 acagaacgagaatccatctc 135043



to top

>gb|AC174767.1| Gasterosteus aculeatus chromosome VMRC28-49C03, complete sequence
          Length = 136807

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 540    aattaaaatgctgctgcacttctt 563
              ||||||||||||||| ||||||||
Sbjct: 136674 aattaaaatgctgctccacttctt 136697



to top

>gb|AC141473.4| Mus musculus BAC clone RP24-187J17 from 3, complete sequence
          Length = 178156

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 456    ttcaacaaattcaacataagcaaa 479
              |||||||||||||||| |||||||
Sbjct: 177450 ttcaacaaattcaacagaagcaaa 177473



to top

>gb|AC133160.4| Mus musculus BAC clone RP24-531K24 from chromosome 3, complete sequence
          Length = 163562

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 456   ttcaacaaattcaacataagcaaa 479
             |||||||||||||||| |||||||
Sbjct: 71518 ttcaacaaattcaacagaagcaaa 71541



to top

>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome
          Length = 1796846

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 445    atagcttctgcttcaacaaattca 468
              ||||||||||||||||||| ||||
Sbjct: 564085 atagcttctgcttcaacaacttca 564062



to top

>emb|AL138498.5|CNS01DWT Human chromosome 14 DNA sequence BAC R-168D12 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 158885

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 599   acagaacgagaatccatctc 618
             ||||||||||||||||||||
Sbjct: 78454 acagaacgagaatccatctc 78473


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,573,059
Number of Sequences: 3902068
Number of extensions: 6573059
Number of successful extensions: 135128
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 134738
Number of HSP's gapped (non-prelim): 374
length of query: 706
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 683
effective length of database: 17,143,297,704
effective search space: 11708872331832
effective search space used: 11708872331832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top