>ATPQ_ARATH (Q9FT52) ATP synthase D chain, mitochondrial (EC 3.6.3.14)|
          Length = 167

 Score =  162 bits (411), Expect(2) = 5e-44
 Identities = 78/108 (72%), Positives = 85/108 (78%)
 Frame = -2

Query: 606 QPIDWEYYRKGIGSKVVDMYKEAYDSIEIPKYVDTVTPRYKPKFDALLVELKEAEKTSLK 427
           +PIDW+YYRKGIG+ +VD YKEAYDSIEIPKYVD VTP YKPKFDALLVELKEAE+ SLK
Sbjct: 59  EPIDWDYYRKGIGAGIVDKYKEAYDSIEIPKYVDKVTPEYKPKFDALLVELKEAEQKSLK 118

Query: 426 ESXXXXXXXXXXXXXXXXISTMTADEYFAKHPELKKKFDDEMRNDYWG 283
           ES                +STMTADEYF KHPELKKKFDDE+RND WG
Sbjct: 119 ESERLEKEIADVQEISKKLSTMTADEYFEKHPELKKKFDDEIRNDNWG 166



 Score = 35.0 bits (79), Expect(2) = 5e-44
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = -1

Query: 664 RRTFEDVNHQLQTKFSQEP 608
           RR F++VN QLQTKFSQEP
Sbjct: 40  RRAFDEVNTQLQTKFSQEP 58

>ATP5H_RAT (P31399) ATP synthase D chain, mitochondrial (EC 3.6.3.14)|
          Length = 160

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -2

Query: 600 IDWEYYRKGIGSK-VVDMYKEAYDSIEIPKYVDTVT 496
           IDW YYR  +    +VD +K  Y++++IP   D  T
Sbjct: 51  IDWAYYRANVDKPGLVDDFKNKYNALKIPVPEDKYT 86

>YTDC1_RAT (Q9QY02) YTH domain-containing protein 1 (Putative splicing factor|
           YT521) (RA301-binding protein)
          Length = 738

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 454 EGGREDISEGIREDREGDC*NEGDEEKDQHND 359
           EGG ED+ E    D +GD   E DE+ ++  D
Sbjct: 202 EGGEEDVEEDEEVDEDGDDDEEVDEDAEEEED 233

>AATF_RAT (Q9QYW0) Protein AATF (Apoptosis-antagonizing transcription factor)|
          Length = 523

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = -1

Query: 454 EGGREDISEGIREDREGDC*NEGDEEKDQHNDSRRVL 344
           EG  E+ISE + ED EG+  +E D E+D++++   V+
Sbjct: 139 EGLEEEISEDVEEDLEGE--DEEDREEDRNSEDDGVV 173

>ST1E1_CAVPO (P49887) Estrogen sulfotransferase (EC 2.8.2.4) (Sulfotransferase,|
           estrogen-preferring) (ST1E3)
          Length = 296

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 534 HKPPCTYPQLLIRFLFCSIPSQLAGGSWENLVWSWWLTSSKVR 662
           H  P ++P+ + +F+   +P     GSW + V SWW  S+  R
Sbjct: 150 HPDPGSFPEFVEKFMQGQVPY----GSWYDHVKSWWEKSTDPR 188

>ATP5H_MOUSE (Q9DCX2) ATP synthase D chain, mitochondrial (EC 3.6.3.14)|
          Length = 160

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -2

Query: 600 IDWEYYRKGIGSK-VVDMYKEAYDSIEIPKYVDTVT 496
           IDW YYR  +    +VD +++ Y++++IP   D  T
Sbjct: 51  IDWAYYRANVAKPGLVDDFEKKYNALKIPVPEDKYT 86


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,622,050
Number of Sequences: 219361
Number of extensions: 1635435
Number of successful extensions: 4914
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4908
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)