ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags7n18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467743.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
2ref|XM_467742.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
4dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
5dbj|AK102767.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
6dbj|AK100319.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
7emb|CT030660.14| Mouse DNA sequence from clone RP23-455F4 on chr... 46 0.090
8emb|AL935197.7| Zebrafish DNA sequence from clone CH211-255P10 i... 46 0.090
9gb|AC154793.2| Mus musculus BAC clone RP23-88B6 from chromosome ... 46 0.090
10emb|AL355495.10| Human DNA sequence from clone RP11-53N12 on chr... 44 0.36
11gb|AC019103.8| Homo sapiens BAC clone RP11-460I19 from 4, comple... 44 0.36
12gb|AC133598.4| Mus musculus BAC clone RP24-374G16 from 13, compl... 44 0.36
13gb|AC101812.19| Mus musculus chromosome 19, clone RP24-309C5, co... 44 0.36
14gb|AC123684.8| Mus musculus chromosome 3, clone RP23-297F14, com... 42 1.4
15emb|AL929319.4| Zebrafish DNA sequence from clone CH211-59F17 in... 42 1.4
16gb|AC092033.4| Homo sapiens BAC clone RP11-794I22 from 7, comple... 42 1.4
17gb|DP000058.1| Felis catus target 117 genomic scaffold 42 1.4
18emb|CR847960.14| Zebrafish DNA sequence from clone DKEY-30E1 in ... 42 1.4
19gb|AC139675.11| Mus musculus chromosome 3, clone RP23-328D16, co... 40 5.6
20gb|AF130342.2| Homo sapiens chromosome 8, complete sequence 40 5.6
21gb|AC161048.2| Mus musculus BAC clone RP24-105N22 from chromosom... 40 5.6
22gb|AC121805.3| Mus musculus BAC clone RP23-443L2 from chromosome... 40 5.6
23gb|AC123938.3| Mus musculus BAC clone RP23-412I12 from chromosom... 40 5.6
24gb|AC018706.3| Homo sapiens BAC clone RP11-99O17 from 7, complet... 40 5.6
25gb|AC129544.7| Mus musculus chromosome 12, clone RP23-258H6, com... 40 5.6
26emb|AL390059.10| Human DNA sequence from clone RP11-399E10 on ch... 40 5.6
27emb|AL663105.4| Human DNA sequence from clone RP4-743D20 on chro... 40 5.6
28emb|AL035404.20|HS144F13 Human DNA sequence from clone RP1-144F1... 40 5.6
29gb|AC008914.7| Homo sapiens chromosome 5 clone CTD-2270I16, comp... 40 5.6
30gb|AC097638.2| Homo sapiens chromosome 3 clone RP11-353H3, compl... 40 5.6
31ref|XM_684784.1| PREDICTED: Danio rerio similar to protein tyros... 40 5.6
32gb|AC008218.5| Drosophila melanogaster, chromosome 3R, region 99... 40 5.6
33gb|AC153485.9| Mus musculus 10 BAC RP23-319B13 (Roswell Park Can... 40 5.6
34gb|AC007856.7|AC007856 Drosophila melanogaster, chromosome 3R, r... 40 5.6
35gb|AC068389.10| Homo sapiens chromosome 8, clone RP11-91I20, com... 40 5.6
36gb|AC016632.7| Homo sapiens chromosome 5 clone RP11-175M2, compl... 40 5.6
37gb|AC009888.1|AC009888 Drosophila melanogaster, chromosome 3R, r... 40 5.6
38gb|AE003770.2| Drosophila melanogaster chromosome 3R, section 10... 40 5.6
39gb|AC005516.1|AC005516 Homo sapiens Chromosome 4p16.3 BAC clone ... 40 5.6
40dbj|AB042323.1| Gallus gallus ZW10 gene for centromere protein Z... 40 5.6
41emb|Z49154.1|HSL1C2 Human DNA sequence from clone LA04NC01-1C2 o... 40 5.6
42gb|AC114627.8| Mus musculus chromosome 3, clone RP24-108F9, comp... 40 5.6
43gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome 40 5.6
44emb|AL954733.12| Zebrafish DNA sequence from clone CH211-285C24 ... 40 5.6
45emb|AL033526.24|HS110F11 Human DNA sequence from clone RP1-110F1... 40 5.6
46emb|AL929136.5| Mouse DNA sequence from clone RP23-442B16 on chr... 40 5.6
47emb|AL833777.11| Mouse DNA sequence from clone RP23-150D10 on ch... 40 5.6 
>ref|XM_467743.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3493

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 378  ttacccgtctgtttgttgtactctctgccttggtgctt 415
            |||| |||| ||||||||||||||||||||||| ||||
Sbjct: 3077 ttactcgtcggtttgttgtactctctgccttggcgctt 3040
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>ref|XM_467742.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3845

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 378  ttacccgtctgtttgttgtactctctgccttggtgctt 415
            |||| |||| ||||||||||||||||||||||| ||||
Sbjct: 3494 ttactcgtcggtttgttgtactctctgccttggcgctt 3457
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                      
Query: 378      ttacccgtctgtttgttgtactctctgccttggtgctt 415
                |||| |||| ||||||||||||||||||||||| ||||
Sbjct: 31198156 ttactcgtcggtttgttgtactctctgccttggcgctt 31198119
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>dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1734_E02
          Length = 168566

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 378   ttacccgtctgtttgttgtactctctgccttggtgctt 415
             |||| |||| ||||||||||||||||||||||| ||||
Sbjct: 77999 ttactcgtcggtttgttgtactctctgccttggcgctt 77962
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>dbj|AK102767.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107F14, full
            insert sequence
          Length = 3845

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 378  ttacccgtctgtttgttgtactctctgccttggtgctt 415
            |||| |||| ||||||||||||||||||||||| ||||
Sbjct: 3494 ttactcgtcggtttgttgtactctctgccttggcgctt 3457
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>dbj|AK100319.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079B22, full
            insert sequence
          Length = 3494

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 378  ttacccgtctgtttgttgtactctctgccttggtgctt 415
            |||| |||| ||||||||||||||||||||||| ||||
Sbjct: 3078 ttactcgtcggtttgttgtactctctgccttggcgctt 3041
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>emb|CT030660.14| Mouse DNA sequence from clone RP23-455F4 on chromosome 13, complete
             sequence
          Length = 174127

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 85    gaaatggaggggaggagaggtgg 107
             |||||||||||||||||||||||
Sbjct: 56572 gaaatggaggggaggagaggtgg 56594
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>emb|AL935197.7| Zebrafish DNA sequence from clone CH211-255P10 in linkage group 12,
              complete sequence
          Length = 193113

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 80     agagggaaatggaggggaggaga 102
              |||||||||||||||||||||||
Sbjct: 170519 agagggaaatggaggggaggaga 170497
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>gb|AC154793.2| Mus musculus BAC clone RP23-88B6 from chromosome 13, complete sequence
          Length = 182356

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 85     gaaatggaggggaggagaggtgg 107
              |||||||||||||||||||||||
Sbjct: 178227 gaaatggaggggaggagaggtgg 178205
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>emb|AL355495.10| Human DNA sequence from clone RP11-53N12 on chromosome 10, complete
              sequence
          Length = 166118

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 79     aagagggaaatggaggggaggagagg 104
              |||||||||| |||||||||||||||
Sbjct: 133070 aagagggaaaaggaggggaggagagg 133095
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>gb|AC019103.8| Homo sapiens BAC clone RP11-460I19 from 4, complete sequence
          Length = 177950

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 88    atggaggggaggagaggtggta 109
             ||||||||||||||||||||||
Sbjct: 75119 atggaggggaggagaggtggta 75140
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>gb|AC133598.4| Mus musculus BAC clone RP24-374G16 from 13, complete sequence
          Length = 170544

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 81     gagggaaatggaggggaggaga 102
              ||||||||||||||||||||||
Sbjct: 112781 gagggaaatggaggggaggaga 112802
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>gb|AC101812.19| Mus musculus chromosome 19, clone RP24-309C5, complete sequence
          Length = 169224

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 79    aagagggaaatggaggggaggagagg 104
             |||||||||| |||||||||||||||
Sbjct: 73086 aagagggaaagggaggggaggagagg 73111
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>gb|AC123684.8| Mus musculus chromosome 3, clone RP23-297F14, complete sequence
          Length = 200566

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 3      tttccttcttttggttctgactgac 27
              |||||||||||||||||||| ||||
Sbjct: 136162 tttccttcttttggttctgagtgac 136138
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>emb|AL929319.4| Zebrafish DNA sequence from clone CH211-59F17 in linkage group 10,
              complete sequence
          Length = 194614

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 30     tacattacatgtgttgggaca 50
              |||||||||||||||||||||
Sbjct: 167620 tacattacatgtgttgggaca 167600
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>gb|AC092033.4| Homo sapiens BAC clone RP11-794I22 from 7, complete sequence
          Length = 218731

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 47     gacataaaatagccaccattt 67
              |||||||||||||||||||||
Sbjct: 135441 gacataaaatagccaccattt 135421
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>gb|DP000058.1| Felis catus target 117 genomic scaffold
          Length = 458092

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 82     agggaaatggaggggaggagaggtg 106
              |||||||||||||| ||||||||||
Sbjct: 126243 agggaaatggagggaaggagaggtg 126267
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>emb|CR847960.14| Zebrafish DNA sequence from clone DKEY-30E1 in linkage group 10,
             complete sequence
          Length = 216655

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 30    tacattacatgtgttgggaca 50
             |||||||||||||||||||||
Sbjct: 23452 tacattacatgtgttgggaca 23432
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>gb|AC139675.11| Mus musculus chromosome 3, clone RP23-328D16, complete sequence
          Length = 204280

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 81     gagggaaatggaggggaggagagg 104
              ||||| ||||||||||||||||||
Sbjct: 198754 gaggggaatggaggggaggagagg 198777
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>gb|AF130342.2| Homo sapiens chromosome 8, complete sequence
          Length = 349992

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 79     aagagggaaatggaggggaggaga 102
              |||||||||| |||||||||||||
Sbjct: 222321 aagagggaaagggaggggaggaga 222344
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>gb|AC161048.2| Mus musculus BAC clone RP24-105N22 from chromosome 12, complete sequence
          Length = 149575

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 385    tctgtttgttgtactctctg 404
              ||||||||||||||||||||
Sbjct: 136649 tctgtttgttgtactctctg 136668
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>gb|AC121805.3| Mus musculus BAC clone RP23-443L2 from chromosome 10, complete sequence
          Length = 194006

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 81     gagggaaatggaggggaggagagg 104
              |||||||| |||||||||||||||
Sbjct: 145837 gagggaaaaggaggggaggagagg 145814
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>gb|AC123938.3| Mus musculus BAC clone RP23-412I12 from chromosome 8, complete sequence
          Length = 193352

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 81     gagggaaatggaggggaggagagg 104
              ||||||| ||||||||||||||||
Sbjct: 155950 gagggaagtggaggggaggagagg 155927
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>gb|AC018706.3| Homo sapiens BAC clone RP11-99O17 from 7, complete sequence
          Length = 101611

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 82    agggaaatggaggggaggagaggt 105
             ||||| ||||||||||||||||||
Sbjct: 73819 agggatatggaggggaggagaggt 73796
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>gb|AC129544.7| Mus musculus chromosome 12, clone RP23-258H6, complete sequence
          Length = 232275

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 385   tctgtttgttgtactctctg 404
             ||||||||||||||||||||
Sbjct: 57502 tctgtttgttgtactctctg 57521
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>emb|AL390059.10| Human DNA sequence from clone RP11-399E10 on chromosome 4, complete
             sequence
          Length = 200379

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     ctttccttcttttggttctg 21
             ||||||||||||||||||||
Sbjct: 75830 ctttccttcttttggttctg 75811
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>emb|AL663105.4| Human DNA sequence from clone RP4-743D20 on chromosome 1 Contains a
             novel gene and a CpG island, complete sequence
          Length = 157062

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     tctttccttcttttggttct 20
             ||||||||||||||||||||
Sbjct: 15480 tctttccttcttttggttct 15461
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>emb|AL035404.20|HS144F13 Human DNA sequence from clone RP1-144F13 on chromosome 1p33-34.3
             Contains the HEYL gene for hairy/enhancer-of-split related
             protein with YRPW-like motif, a novel gene, the NT5C1A
             gene for cytosolic IA 5'-nucleotidase, the HPCAL4 gene for
             hippocalcin like 4, a novel pseudogene, the 5' end of the
             PPIE gene for peptidylprolyl isomerase E (cyclophilin E)
             and six CpG islands, complete sequence
          Length = 154412

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 22    actgacattacattacatgtgttg 45
             ||||||||||||||| ||||||||
Sbjct: 57931 actgacattacattatatgtgttg 57908
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>gb|AC008914.7| Homo sapiens chromosome 5 clone CTD-2270I16, complete sequence
          Length = 139677

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    gagggaaatggaggggagga 100
             ||||||||||||||||||||
Sbjct: 12196 gagggaaatggaggggagga 12215
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>gb|AC097638.2| Homo sapiens chromosome 3 clone RP11-353H3, complete sequence
          Length = 170330

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 79    aagagggaaatggaggggaggaga 102
             ||||| ||||||||||||||||||
Sbjct: 76783 aagagagaaatggaggggaggaga 76760
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>ref|XM_684784.1| PREDICTED: Danio rerio similar to protein tyrosine phosphatase 2E
           (LOC561374), mRNA
          Length = 3000

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 251 ttacagggaaagcaaaagga 270
           ||||||||||||||||||||
Sbjct: 819 ttacagggaaagcaaaagga 838
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>gb|AC008218.5| Drosophila melanogaster, chromosome 3R, region 99B-99B, BAC clone
             BACR10L12, complete sequence
          Length = 178791

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    aatagccaccatttggtgga 73
             ||||||||||||||||||||
Sbjct: 23711 aatagccaccatttggtgga 23730
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>gb|AC153485.9| Mus musculus 10 BAC RP23-319B13 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 213412

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 81    gagggaaatggaggggaggagagg 104
             |||||||| |||||||||||||||
Sbjct: 44228 gagggaaaaggaggggaggagagg 44205
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>gb|AC007856.7|AC007856 Drosophila melanogaster, chromosome 3R, region 99B-99B, BAC clone
             BACR05L03, complete sequence
          Length = 175124

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    aatagccaccatttggtgga 73
             ||||||||||||||||||||
Sbjct: 71894 aatagccaccatttggtgga 71913
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>gb|AC068389.10| Homo sapiens chromosome 8, clone RP11-91I20, complete sequence
          Length = 171515

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     tctttccttcttttggttct 20
             ||||||||||||||||||||
Sbjct: 97020 tctttccttcttttggttct 97001
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>gb|AC016632.7| Homo sapiens chromosome 5 clone RP11-175M2, complete sequence
          Length = 177185

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    gagggaaatggaggggagga 100
             ||||||||||||||||||||
Sbjct: 36456 gagggaaatggaggggagga 36437
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>gb|AC009888.1|AC009888 Drosophila melanogaster, chromosome 3R, region 99A7-99B5, BAC clones
              BACR48K01 and BACR48O23, complete sequence
          Length = 311043

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     aatagccaccatttggtgga 73
              ||||||||||||||||||||
Sbjct: 281015 aatagccaccatttggtgga 281034
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>gb|AE003770.2| Drosophila melanogaster chromosome 3R, section 108 of 118 of the
             complete sequence
          Length = 224264

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    aatagccaccatttggtgga 73
             ||||||||||||||||||||
Sbjct: 55959 aatagccaccatttggtgga 55978
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>gb|AC005516.1|AC005516 Homo sapiens Chromosome 4p16.3 BAC clone 399e10 containing Huntington's
             Disease gene; exons 1-67, complete sequence
          Length = 200348

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     ctttccttcttttggttctg 21
             ||||||||||||||||||||
Sbjct: 75800 ctttccttcttttggttctg 75781
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>dbj|AB042323.1| Gallus gallus ZW10 gene for centromere protein ZW10, complete cds
          Length = 17419

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 251  ttacagggaaagcaaaagga 270
            ||||||||||||||||||||
Sbjct: 9021 ttacagggaaagcaaaagga 9002
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>emb|Z49154.1|HSL1C2 Human DNA sequence from clone LA04NC01-1C2 on chromosome 4, complete
            sequence
          Length = 32539

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 2    ctttccttcttttggttctg 21
            ||||||||||||||||||||
Sbjct: 4789 ctttccttcttttggttctg 4770
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>gb|AC114627.8| Mus musculus chromosome 3, clone RP24-108F9, complete sequence
          Length = 152152

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 81     gagggaaatggaggggaggagagg 104
              ||||| ||||||||||||||||||
Sbjct: 110501 gaggggaatggaggggaggagagg 110478
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>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome
          Length = 1992676

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 145    tccttgttcaactgttacat 164
              ||||||||||||||||||||
Sbjct: 659463 tccttgttcaactgttacat 659444
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>emb|AL954733.12| Zebrafish DNA sequence from clone CH211-285C24 in linkage group 7,
             complete sequence
          Length = 65352

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    acattacattacatgtgttg 45
             ||||||||||||||||||||
Sbjct: 38003 acattacattacatgtgttg 37984
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>emb|AL033526.24|HS110F11 Human DNA sequence from clone RP1-110F11 on chromosome 1p33-34.3,
             complete sequence
          Length = 112339

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 22    actgacattacattacatgtgttg 45
             ||||||||||||||| ||||||||
Sbjct: 91347 actgacattacattatatgtgttg 91324
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>emb|AL929136.5| Mouse DNA sequence from clone RP23-442B16 on chromosome 2, complete
              sequence
          Length = 112788

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 73     aaacacaagagggaaatggaggggaggagagg 104
              ||||| |||||||||| | |||||||||||||
Sbjct: 109830 aaacagaagagggaaaggaaggggaggagagg 109861
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>emb|AL833777.11| Mouse DNA sequence from clone RP23-150D10 on chromosome X, complete
             sequence
          Length = 189554

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    tggaggggaggagaggtggt 108
             ||||||||||||||||||||
Sbjct: 70260 tggaggggaggagaggtggt 70241


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,830,629
Number of Sequences: 3902068
Number of extensions: 3830629
Number of successful extensions: 82331
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82203
Number of HSP's gapped (non-prelim): 128
length of query: 415
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 393
effective length of database: 17,147,199,772
effective search space: 6738849510396
effective search space used: 6738849510396
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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