| Clone Name | rbags7n08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016490.1| Zea mays clone Contig323 mRNA sequence Length = 1035 Score = 345 bits (174), Expect = 1e-91 Identities = 267/298 (89%) Strand = Plus / Plus Query: 352 aactcaagcctcttccacttgctcctcctcttcctggaggaggttctctctgttgtcatg 411 |||||| ||||||||||||||||| |||||||||||||| |||||||| |||||||| || Sbjct: 381 aactcatgcctcttccacttgctcttcctcttcctggagaaggttctccctgttgtcgtg 440 Query: 412 ggcccagaagccgcggacatctataagcatgctggcgatagtcccgccttgcttgcagga 471 |||||||||||| || |||||||||||||||||||| | |||||| ||||||||||| || Sbjct: 441 ggcccagaagccacgcacatctataagcatgctggcaacagtcccaccttgcttgcaaga 500 Query: 472 aaggagatctgcaagtgcgatccggagaggatcggctggtttcaccatgtcccagatttc 531 ||| ||||||| || | ||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 501 aagaagatctgatagcgagatcctgagaggatctgcgggtttcaccatgtcccagatttc 560 Query: 532 atcccttacatcttcaatgcaaagctcatagttcccaccctcgatccacttctggtgcac 591 |||||| || ||||| |||||||||||||||||||| ||||| ||||| |||||||| || Sbjct: 561 atccctcacgtcttctatgcaaagctcatagttccctccctcaatccatttctggtgtac 620 Query: 592 atctctaaatagagtatgaatatcagcagttgtcaggaatccccttccgttgagatca 649 ||||||||||||||||||||||| |||||||| ||||| |||||||| ||||||||| Sbjct: 621 gtctctaaatagagtatgaatatctgcagttgtaaggaaaccccttccattgagatca 678
>dbj|AK070081.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044K03, full insert sequence Length = 2025 Score = 345 bits (174), Expect = 1e-91 Identities = 267/298 (89%) Strand = Plus / Minus Query: 352 aactcaagcctcttccacttgctcctcctcttcctggaggaggttctctctgttgtcatg 411 |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 1582 aactcaggcctcttccacttgctcttcctcttcctggaggaggttctctctgttgtcgtg 1523 Query: 412 ggcccagaagccgcggacatctataagcatgctggcgatagtcccgccttgcttgcagga 471 ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || Sbjct: 1522 ggcccagaagccgcgcacatctataagcatgctggcaatagtcccgccttgcttgcaaga 1463 Query: 472 aaggagatctgcaagtgcgatccggagaggatcggctggtttcaccatgtcccagatttc 531 || ||||||| |||||||||| ||||||||| || || || ||||||||||||||||| Sbjct: 1462 tagaagatctgttagtgcgatcctgagaggatctgccggctttaccatgtcccagatttc 1403 Query: 532 atcccttacatcttcaatgcaaagctcatagttcccaccctcgatccacttctggtgcac 591 |||||| || ||||| |||||||| |||||||| || || || ||||| |||||||| || Sbjct: 1402 atccctcacgtcttcgatgcaaagttcatagtttccgccttcaatccatttctggtgtac 1343 Query: 592 atctctaaatagagtatgaatatcagcagttgtcaggaatccccttccgttgagatca 649 ||| ||||||| ||||| ||||||||||||||||||||||||||||| || |||||| Sbjct: 1342 atccctaaataatgtatggatatcagcagttgtcaggaatccccttccattaagatca 1285
>dbj|AK058366.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-F12, full insert sequence Length = 1435 Score = 345 bits (174), Expect = 1e-91 Identities = 267/298 (89%) Strand = Plus / Minus Query: 352 aactcaagcctcttccacttgctcctcctcttcctggaggaggttctctctgttgtcatg 411 |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 1047 aactcaggcctcttccacttgctcttcctcttcctggaggaggttctctctgttgtcgtg 988 Query: 412 ggcccagaagccgcggacatctataagcatgctggcgatagtcccgccttgcttgcagga 471 ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || Sbjct: 987 ggcccagaagccgcgcacatctataagcatgctggcaatagtcccgccttgcttgcaaga 928 Query: 472 aaggagatctgcaagtgcgatccggagaggatcggctggtttcaccatgtcccagatttc 531 || ||||||| |||||||||| ||||||||| || || || ||||||||||||||||| Sbjct: 927 tagaagatctgttagtgcgatcctgagaggatctgccggctttaccatgtcccagatttc 868 Query: 532 atcccttacatcttcaatgcaaagctcatagttcccaccctcgatccacttctggtgcac 591 |||||| || ||||| |||||||| |||||||| || || || ||||| |||||||| || Sbjct: 867 atccctcacgtcttcgatgcaaagttcatagtttccgccttcaatccatttctggtgtac 808 Query: 592 atctctaaatagagtatgaatatcagcagttgtcaggaatccccttccgttgagatca 649 ||| ||||||| ||||| ||||||||||||||||||||||||||||| || |||||| Sbjct: 807 atccctaaataatgtatggatatcagcagttgtcaggaatccccttccattaagatca 750
>gb|AY103889.1| Zea mays PCO119117 mRNA sequence Length = 1842 Score = 345 bits (174), Expect = 1e-91 Identities = 267/298 (89%) Strand = Plus / Minus Query: 352 aactcaagcctcttccacttgctcctcctcttcctggaggaggttctctctgttgtcatg 411 |||||| ||||||||||||||||| |||||||||||||| |||||||| |||||||| || Sbjct: 1436 aactcatgcctcttccacttgctcttcctcttcctggagaaggttctccctgttgtcgtg 1377 Query: 412 ggcccagaagccgcggacatctataagcatgctggcgatagtcccgccttgcttgcagga 471 |||||||||||| || |||||||||||||||||||||| |||||| ||||||||||| || Sbjct: 1376 ggcccagaagccacgcacatctataagcatgctggcgacagtcccaccttgcttgcaaga 1317 Query: 472 aaggagatctgcaagtgcgatccggagaggatcggctggtttcaccatgtcccagatttc 531 ||| || |||| || | ||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 1316 aagaaggtctgatagcgagatcctgagaggatctgcgggtttcaccatgtcccagatttc 1257 Query: 532 atcccttacatcttcaatgcaaagctcatagttcccaccctcgatccacttctggtgcac 591 |||||| || ||||| |||||||||||||||||||| ||||| ||||| |||||||| || Sbjct: 1256 atccctcacgtcttctatgcaaagctcatagttccctccctcaatccatttctggtgtac 1197 Query: 592 atctctaaatagagtatgaatatcagcagttgtcaggaatccccttccgttgagatca 649 ||||||||||||||||||||||| |||||||| ||||| |||||||| ||||||||| Sbjct: 1196 gtctctaaatagagtatgaatatctgcagttgtaaggaaaccccttccattgagatca 1139
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 291 bits (147), Expect = 1e-75 Identities = 219/243 (90%) Strand = Plus / Plus Query: 352 aactcaagcctcttccacttgctcctcctcttcctggaggaggttctctctgttgtcatg 411 |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 76721 aactcaggcctcttccacttgctcttcctcttcctggaggaggttctctctgttgtcgtg 76780 Query: 412 ggcccagaagccgcggacatctataagcatgctggcgatagtcccgccttgcttgcagga 471 ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || Sbjct: 76781 ggcccagaagccgcgcacatctataagcatgctggcaatagtcccgccttgcttgcaaga 76840 Query: 472 aaggagatctgcaagtgcgatccggagaggatcggctggtttcaccatgtcccagatttc 531 || ||||||| |||||||||| ||||||||| || || || ||||||||||||||||| Sbjct: 76841 tagaagatctgttagtgcgatcctgagaggatctgccggctttaccatgtcccagatttc 76900 Query: 532 atcccttacatcttcaatgcaaagctcatagttcccaccctcgatccacttctggtgcac 591 |||||| || ||||| |||||||| |||||||| ||||| || ||||| |||||||| || Sbjct: 76901 atccctcacgtcttcgatgcaaagttcatagtttccaccttcaatccatttctggtgtac 76960 Query: 592 atc 594 ||| Sbjct: 76961 atc 76963 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 596 ctaaatagagtatgaatatcagcagttgtcaggaatccccttccgttgagatca 649 ||||||| ||||| ||||||||||||||||||||||||||||| || |||||| Sbjct: 77824 ctaaataatgtatggatatcagcagttgtcaggaatccccttccattaagatca 77877
>gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1504_G04, complete sequence Length = 88812 Score = 283 bits (143), Expect = 4e-73 Identities = 218/243 (89%) Strand = Plus / Minus Query: 352 aactcaagcctcttccacttgctcctcctcttcctggaggaggttctctctgttgtcatg 411 |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 69145 aactcaggcctcttccacttgctcttcctcttcctggaggaggttctctctgttgtcgtg 69086 Query: 412 ggcccagaagccgcggacatctataagcatgctggcgatagtcccgccttgcttgcagga 471 ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || Sbjct: 69085 ggcccagaagccgcgcacatctataagcatgctggcaatagtcccgccttgcttgcaaga 69026 Query: 472 aaggagatctgcaagtgcgatccggagaggatcggctggtttcaccatgtcccagatttc 531 || ||||||| |||||||||| ||||||||| || || || ||||||||||||||||| Sbjct: 69025 tagaagatctgttagtgcgatcctgagaggatctgccggctttaccatgtcccagatttc 68966 Query: 532 atcccttacatcttcaatgcaaagctcatagttcccaccctcgatccacttctggtgcac 591 |||||| || ||||| |||||||| |||||||| || || || ||||| |||||||| || Sbjct: 68965 atccctcacgtcttcgatgcaaagttcatagtttccgccttcaatccatttctggtgtac 68906 Query: 592 atc 594 ||| Sbjct: 68905 atc 68903 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 596 ctaaatagagtatgaatatcagcagttgtcaggaatccccttccgttgagatca 649 ||||||| ||||| ||||||||||||||||||||||||||||| || |||||| Sbjct: 68042 ctaaataatgtatggatatcagcagttgtcaggaatccccttccattaagatca 67989
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 283 bits (143), Expect = 4e-73 Identities = 218/243 (89%) Strand = Plus / Minus Query: 352 aactcaagcctcttccacttgctcctcctcttcctggaggaggttctctctgttgtcatg 411 |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 2790819 aactcaggcctcttccacttgctcttcctcttcctggaggaggttctctctgttgtcgtg 2790760 Query: 412 ggcccagaagccgcggacatctataagcatgctggcgatagtcccgccttgcttgcagga 471 ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || Sbjct: 2790759 ggcccagaagccgcgcacatctataagcatgctggcaatagtcccgccttgcttgcaaga 2790700 Query: 472 aaggagatctgcaagtgcgatccggagaggatcggctggtttcaccatgtcccagatttc 531 || ||||||| |||||||||| ||||||||| || || || ||||||||||||||||| Sbjct: 2790699 tagaagatctgttagtgcgatcctgagaggatctgccggctttaccatgtcccagatttc 2790640 Query: 532 atcccttacatcttcaatgcaaagctcatagttcccaccctcgatccacttctggtgcac 591 |||||| || ||||| |||||||| |||||||| || || || ||||| |||||||| || Sbjct: 2790639 atccctcacgtcttcgatgcaaagttcatagtttccgccttcaatccatttctggtgtac 2790580 Query: 592 atc 594 ||| Sbjct: 2790579 atc 2790577 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 596 ctaaatagagtatgaatatcagcagttgtcaggaatccccttccgttgagatca 649 ||||||| ||||| ||||||||||||||||||||||||||||| || |||||| Sbjct: 2789716 ctaaataatgtatggatatcagcagttgtcaggaatccccttccattaagatca 2789663
>gb|BT017064.1| Zea mays clone EL01N0358E03.c mRNA sequence Length = 1417 Score = 234 bits (118), Expect = 3e-58 Identities = 253/298 (84%) Strand = Plus / Minus Query: 352 aactcaagcctcttccacttgctcctcctcttcctggaggaggttctctctgttgtcatg 411 |||||| |||||||||||||| || ||||||||||||| | | |||| |||||||| | Sbjct: 1055 aactcatgcctcttccacttggtcttcctcttcctggaaaaaggtctccctgttgtcggg 996 Query: 412 ggcccagaagccgcggacatctataagcatgctggcgatagtcccgccttgcttgcagga 471 |||||| || || | |||| |||||||||| ||| | |||||| ||||||||||| | Sbjct: 995 ggcccaaaaaccacccacatttataagcatggtgggaacagtcccaccttgcttgcaaaa 936 Query: 472 aaggagatctgcaagtgcgatccggagaggatcggctggtttcaccatgtcccagatttc 531 || | ||||| || | ||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 935 aaaaaaatctgatagcgagatcctgagaggatctgcgggtttcaccatgtcccagatttc 876 Query: 532 atcccttacatcttcaatgcaaagctcatagttcccaccctcgatccacttctggtgcac 591 |||||| || ||||| |||||||||||||||||||| ||||| ||||| |||||||| || Sbjct: 875 atccctcacgtcttctatgcaaagctcatagttccctccctcaatccatttctggtgtac 816 Query: 592 atctctaaatagagtatgaatatcagcagttgtcaggaatccccttccgttgagatca 649 ||||||||||||||||||||||| |||||||| ||||| |||||||| ||||||||| Sbjct: 815 gtctctaaatagagtatgaatatctgcagttgtaaggaaaccccttccattgagatca 758
>gb|BT014514.1| Lycopersicon esculentum clone 133901F, mRNA sequence Length = 2053 Score = 113 bits (57), Expect = 7e-22 Identities = 219/273 (80%) Strand = Plus / Minus Query: 377 tcctcttcctggaggaggttctctctgttgtcatgggcccagaagccgcggacatctata 436 ||||||||||| || || || ||||||||||||||||||||||| || || ||||||||| Sbjct: 1687 tcctcttcctgtagaagattttctctgttgtcatgggcccagaaaccacgcacatctata 1628 Query: 437 agcatgctggcgatagtcccgccttgcttgcaggaaaggagatctgcaagtgcgatccgg 496 |||||||| || | ||| || ||||| ||||| || || | ||| || |||| |||| Sbjct: 1627 agcatgcttgcaacagtgccaccttgtttgcatgatagcaaatcagccagtgatatcctc 1568 Query: 497 agaggatcggctggtttcaccatgtcccagatttcatcccttacatcttcaatgcaaagc 556 | || || | || |||||||| ||||| ||||||||||||||||| || ||||| || Sbjct: 1567 aaagagtcagacggcttcaccatatcccatatttcatcccttacatcctcgatgcatagt 1508 Query: 557 tcatagttcccaccctcgatccacttctggtgcacatctctaaatagagtatgaatatca 616 ||||||||||| || || ||||| || || || |||||||| ||||| || |||||||| Sbjct: 1507 tcatagttccctccttcaatccatttttgatggacatctctgaatagtgtgtgaatatcc 1448 Query: 617 gcagttgtcaggaatccccttccgttgagatca 649 || || || | ||| |||||||| | ||||||| Sbjct: 1447 gctgtagttaagaaaccccttccttggagatca 1415
>gb|AC182669.2| Populus trichocarpa clone Pop1-21I14, complete sequence Length = 149597 Score = 105 bits (53), Expect = 2e-19 Identities = 179/221 (80%) Strand = Plus / Minus Query: 377 tcctcttcctggaggaggttctctctgttgtcatgggcccagaagccgcggacatctata 436 |||||||||||||| || |||||||| || ||||||||||| || ||||| || |||||| Sbjct: 108786 tcctcttcctggagaagattctctctattatcatgggcccaaaaaccgcgcacgtctata 108727 Query: 437 agcatgctggcgatagtcccgccttgcttgcaggaaaggagatctgcaagtgcgatccgg 496 ||||||||||| | |||||| ||||| ||||| | || ||||| || |||| || | Sbjct: 108726 agcatgctggctacagtcccaccttgtttgcaagctagcagatcagccagtgtaatactc 108667 Query: 497 agaggatcggctggtttcaccatgtcccagatttcatcccttacatcttcaatgcaaagc 556 || || || ||||| || ||||| ||||| ||||||||||| ||||| ||||| || | Sbjct: 108666 agtgggtcagctggcttgaccatatcccatatttcatccctcacatcctcaatacacaat 108607 Query: 557 tcatagttcccaccctcgatccacttctggtgcacatctct 597 |||||||| || || || ||||| |||||||| |||||||| Sbjct: 108606 tcatagttaccgccttcaatccatttctggtgtacatctct 108566
>ref|NM_121863.2| Arabidopsis thaliana FASS (FASS 1) AT5G18580 (FASS) mRNA, complete cds Length = 1954 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Minus Query: 509 ggtttcaccatgtcccagatttcatcccttacatcttcaatgcaaagctcatagttccca 568 |||||||||||||||||||| || || | |||||||| ||||| || |||||||||||| Sbjct: 1441 ggtttcaccatgtcccagatctcgtctcgaacatcttctatgcacagttcatagttccca 1382 Query: 569 ccctcgatccacttctggtgcacatctctaaatagagtatgaatatcagcagt 621 || || ||||| |||||||| |||||||| || |||| |||||||||||||| Sbjct: 1381 ccttctatccatttctggtgaacatctctgaaaagagagtgaatatcagcagt 1329 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 392 aggttctctctgttgtcatgggcccagaagccgcggacatctataagcatgct 444 |||||||| | ||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 1558 aggttctcacggttgtcatgagcccagaagccacgcacatctataagcatgct 1506
>gb|AY113888.1| Arabidopsis thaliana unknown protein (At5g18580) mRNA, complete cds Length = 1474 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Minus Query: 509 ggtttcaccatgtcccagatttcatcccttacatcttcaatgcaaagctcatagttccca 568 |||||||||||||||||||| || || | |||||||| ||||| || |||||||||||| Sbjct: 1283 ggtttcaccatgtcccagatctcgtctcgaacatcttctatgcacagttcatagttccca 1224 Query: 569 ccctcgatccacttctggtgcacatctctaaatagagtatgaatatcagcagt 621 || || ||||| |||||||| |||||||| || |||| |||||||||||||| Sbjct: 1223 ccttctatccatttctggtgaacatctctgaaaagagagtgaatatcagcagt 1171 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 392 aggttctctctgttgtcatgggcccagaagccgcggacatctataagcatgct 444 |||||||| | ||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 1400 aggttctcacggttgtcatgagcccagaagccacgcacatctataagcatgct 1348
>gb|AF360316.1| Arabidopsis thaliana unknown protein (At5g18580) mRNA, complete cds Length = 1791 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Minus Query: 509 ggtttcaccatgtcccagatttcatcccttacatcttcaatgcaaagctcatagttccca 568 |||||||||||||||||||| || || | |||||||| ||||| || |||||||||||| Sbjct: 1428 ggtttcaccatgtcccagatctcgtctcgaacatcttctatgcacagttcatagttccca 1369 Query: 569 ccctcgatccacttctggtgcacatctctaaatagagtatgaatatcagcagt 621 || || ||||| |||||||| |||||||| || |||| |||||||||||||| Sbjct: 1368 ccttctatccatttctggtgaacatctctgaaaagagagtgaatatcagcagt 1316 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 392 aggttctctctgttgtcatgggcccagaagccgcggacatctataagcatgct 444 |||||||| | ||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 1545 aggttctcacggttgtcatgagcccagaagccacgcacatctataagcatgct 1493
>gb|AF280057.1| Arabidopsis thaliana tonneau 2 (TON2) mRNA, complete cds Length = 1745 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Minus Query: 509 ggtttcaccatgtcccagatttcatcccttacatcttcaatgcaaagctcatagttccca 568 |||||||||||||||||||| || || | |||||||| ||||| || |||||||||||| Sbjct: 1441 ggtttcaccatgtcccagatctcgtctcgaacatcttctatgcacagttcatagttccca 1382 Query: 569 ccctcgatccacttctggtgcacatctctaaatagagtatgaatatcagcagt 621 || || ||||| |||||||| |||||||| || |||| |||||||||||||| Sbjct: 1381 ccttctatccatttctggtgaacatctctgaaaagagagtgaatatcagcagt 1329 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 392 aggttctctctgttgtcatgggcccagaagccgcggacatctataagcatgct 444 |||||||| | ||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 1558 aggttctcacggttgtcatgagcccagaagccacgcacatctataagcatgct 1506
>emb|BX833832.1|CNS09Z17 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL79ZF08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1685 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Minus Query: 509 ggtttcaccatgtcccagatttcatcccttacatcttcaatgcaaagctcatagttccca 568 |||||||||||||||||||| || || | |||||||| ||||| || |||||||||||| Sbjct: 1417 ggtttcaccatgtcccagatctcgtctcgaacatcttctatgcacagttcatagttccca 1358 Query: 569 ccctcgatccacttctggtgcacatctctaaatagagtatgaatatcagcagt 621 || || ||||| |||||||| |||||||| || |||| |||||||||||||| Sbjct: 1357 ccttctatccatttctggtgaacatctctgaaaagagagtgaatatcagcagt 1305 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 392 aggttctctctgttgtcatgggcccagaagccgcggacatctataagcatgct 444 |||||||| | ||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 1534 aggttctcacggttgtcatgagcccagaagccacgcacatctataagcatgct 1482
>emb|BX833322.1|CNS09Z3V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZF02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1653 Score = 89.7 bits (45), Expect = 1e-14 Identities = 96/113 (84%) Strand = Plus / Minus Query: 509 ggtttcaccatgtcccagatttcatcccttacatcttcaatgcaaagctcatagttccca 568 |||||||||||||||||||| || || | |||||||| ||||| || |||||||||||| Sbjct: 1403 ggtttcaccatgtcccagatctcgtctcgaacatcttctatgcacagttcatagttccca 1344 Query: 569 ccctcgatccacttctggtgcacatctctaaatagagtatgaatatcagcagt 621 || || ||||| |||||||| |||||||| || |||| | |||||||||||| Sbjct: 1343 ccttctatccatttctggtgaacatctctgaaaagagagtaaatatcagcagt 1291 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 392 aggttctctctgttgtcatgggcccagaagccgcggacatctataagcatgct 444 |||||||| | ||||| ||| ||||||||||| || ||||||||||||||||| Sbjct: 1520 aggttctcacggttgttatgagcccagaagccacgcacatctataagcatgct 1468
>ref|NM_121864.2| Arabidopsis thaliana unknown protein AT5G18590 transcript variant AT5G18590.1 mRNA, complete cds Length = 3035 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 509 ggtttcaccatgtcccagatttcatcccttacatcttcaatgcaaagctcatagttccca 568 |||||||||||||||||||| || || | |||||||| ||||| || |||||||||||| Sbjct: 2946 ggtttcaccatgtcccagatctcgtctcgaacatcttctatgcacagttcatagttccca 3005 Query: 569 ccctcgatccacttctggtgcacatctct 597 || || ||||| |||||||| |||||||| Sbjct: 3006 ccttctatccatttctggtgaacatctct 3034 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 392 aggttctctctgttgtcatgggcccagaagccgcggacatctataagcatgct 444 |||||||| | ||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 2829 aggttctcacggttgtcatgagcccagaagccacgcacatctataagcatgct 2881
>ref|NM_180515.1| Arabidopsis thaliana unknown protein AT5G18590 transcript variant AT5G18590.2 mRNA, complete cds Length = 3090 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 509 ggtttcaccatgtcccagatttcatcccttacatcttcaatgcaaagctcatagttccca 568 |||||||||||||||||||| || || | |||||||| ||||| || |||||||||||| Sbjct: 3001 ggtttcaccatgtcccagatctcgtctcgaacatcttctatgcacagttcatagttccca 3060 Query: 569 ccctcgatccacttctggtgcacatctct 597 || || ||||| |||||||| |||||||| Sbjct: 3061 ccttctatccatttctggtgaacatctct 3089 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 392 aggttctctctgttgtcatgggcccagaagccgcggacatctataagcatgct 444 |||||||| | ||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 2884 aggttctcacggttgtcatgagcccagaagccacgcacatctataagcatgct 2936
>gb|AF290025.1| Arabidopsis thaliana tonneau 2 (TON2) gene, complete cds Length = 5756 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 509 ggtttcaccatgtcccagatttcatcccttacatcttcaatgcaaagctcatagttccca 568 |||||||||||||||||||| || || | |||||||| ||||| || |||||||||||| Sbjct: 5345 ggtttcaccatgtcccagatctcgtctcgaacatcttctatgcacagttcatagttccca 5286 Query: 569 ccctcgatccacttctggtgcacatctct 597 || || ||||| |||||||| |||||||| Sbjct: 5285 ccttctatccatttctggtgaacatctct 5257 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 392 aggttctctctgttgtcatgggcccagaagccgcggacatctataagcatgct 444 |||||||| | ||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 5462 aggttctcacggttgtcatgagcccagaagccacgcacatctataagcatgct 5410
>gb|AC069328.1|AC069328 Genomic Sequence For Arabidopsis thaliana Clone T28N17 From Chromosome V, complete sequence Length = 75593 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 509 ggtttcaccatgtcccagatttcatcccttacatcttcaatgcaaagctcatagttccca 568 |||||||||||||||||||| || || | |||||||| ||||| || |||||||||||| Sbjct: 25256 ggtttcaccatgtcccagatctcgtctcgaacatcttctatgcacagttcatagttccca 25315 Query: 569 ccctcgatccacttctggtgcacatctct 597 || || ||||| |||||||| |||||||| Sbjct: 25316 ccttctatccatttctggtgaacatctct 25344 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 392 aggttctctctgttgtcatgggcccagaagccgcggacatctataagcatgct 444 |||||||| | ||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 25139 aggttctcacggttgtcatgagcccagaagccacgcacatctataagcatgct 25191
>gb|AC051627.4|AC051627 Genomic Sequence For Arabidopsis thaliana Clone T1A4 From Chromosome V, complete sequence Length = 85746 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 509 ggtttcaccatgtcccagatttcatcccttacatcttcaatgcaaagctcatagttccca 568 |||||||||||||||||||| || || | |||||||| ||||| || |||||||||||| Sbjct: 84295 ggtttcaccatgtcccagatctcgtctcgaacatcttctatgcacagttcatagttccca 84354 Query: 569 ccctcgatccacttctggtgcacatctct 597 || || ||||| |||||||| |||||||| Sbjct: 84355 ccttctatccatttctggtgaacatctct 84383 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 392 aggttctctctgttgtcatgggcccagaagccgcggacatctataagcatgct 444 |||||||| | ||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 84178 aggttctcacggttgtcatgagcccagaagccacgcacatctataagcatgct 84230
>ref|NM_179485.1| Arabidopsis thaliana transporter AT1G55690 transcript variant AT1G55690.2 mRNA, complete cds Length = 2521 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 528 tttcatcccttacatcttcaatg 550 ||||||||||||||||||||||| Sbjct: 535 tttcatcccttacatcttcaatg 513
>ref|NM_179484.2| Arabidopsis thaliana transporter AT1G55690 transcript variant AT1G55690.1 mRNA, complete cds Length = 2607 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 528 tttcatcccttacatcttcaatg 550 ||||||||||||||||||||||| Sbjct: 659 tttcatcccttacatcttcaatg 637
>ref|NM_104445.2| Arabidopsis thaliana transporter AT1G55690 transcript variant AT1G55690.3 mRNA, complete cds Length = 2756 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 528 tttcatcccttacatcttcaatg 550 ||||||||||||||||||||||| Sbjct: 659 tttcatcccttacatcttcaatg 637
>gb|AC154221.3| Mus musculus BAC clone RP24-373L7 from chromosome 13, complete sequence Length = 157332 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 360 cctcttccacttgctcctcctcttcct 386 |||||||| |||||||||||||||||| Sbjct: 142128 cctcttcctcttgctcctcctcttcct 142154
>gb|AC154523.2| Mus musculus BAC clone RP24-65H12 from chromosome 13, complete sequence Length = 196410 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 360 cctcttccacttgctcctcctcttcct 386 |||||||| |||||||||||||||||| Sbjct: 173751 cctcttcctcttgctcctcctcttcct 173725
>ref|XM_455543.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F10175g predicted mRNA Length = 1731 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 360 cctcttccacttgctcctcctcttcct 386 |||||||| |||||||||||||||||| Sbjct: 1372 cctcttcctcttgctcctcctcttcct 1346
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 360 cctcttccacttgctcctcctcttcct 386 |||||||| |||||||||||||||||| Sbjct: 944860 cctcttcctcttgctcctcctcttcct 944886
>gb|AC091723.3| Sus scrofa clone RP44-349L7, complete sequence Length = 76665 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 362 tcttccacttgctcctcctcttc 384 ||||||||||||||||||||||| Sbjct: 34037 tcttccacttgctcctcctcttc 34059
>emb|BX816980.1|CNS0AASO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZF04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2477 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 528 tttcatcccttacatcttcaatg 550 ||||||||||||||||||||||| Sbjct: 529 tttcatcccttacatcttcaatg 507
>gb|BT021992.1| Arabidopsis thaliana At1g55690 gene, complete cds Length = 2454 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 528 tttcatcccttacatcttcaatg 550 ||||||||||||||||||||||| Sbjct: 522 tttcatcccttacatcttcaatg 500
>gb|AC002328.2|AC002328 Genomic sequence for Arabidopsis thaliana BAC F20N2 from chromosome I, complete sequence Length = 109171 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 528 tttcatcccttacatcttcaatg 550 ||||||||||||||||||||||| Sbjct: 49670 tttcatcccttacatcttcaatg 49692
>gb|AC154406.2| Mus musculus BAC clone RP24-251M20 from 9, complete sequence Length = 169877 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 360 cctcttccacttgctcctcctcttcct 386 |||||||||||| |||||||||||||| Sbjct: 115532 cctcttccacttcctcctcctcttcct 115506
>dbj|AP006410.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT29C05, TM0301a, complete sequence Length = 28124 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 360 cctcttccacttgctcctcctcttcct 386 |||||||||||| |||||||||||||| Sbjct: 23691 cctcttccacttcctcctcctcttcct 23717 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 360 cctcttccacttgctcctcctcttcctg 387 ||||||||| || ||||||||||||||| Sbjct: 23796 cctcttccaattcctcctcctcttcctg 23823
>dbj|AP006351.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT04E21, TM0336, complete sequence Length = 113233 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 360 cctcttccacttgctcctcctcttcct 386 |||||||||||| |||||||||||||| Sbjct: 98775 cctcttccacttcctcctcctcttcct 98749
>gb|AC091660.2| Bos taurus clone RP42-354B6, complete sequence Length = 173068 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 381 cttcctggaggaggttctctct 402 |||||||||||||||||||||| Sbjct: 119086 cttcctggaggaggttctctct 119065
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 365 tccacttgctcctcctcttcct 386 |||||||||||||||||||||| Sbjct: 725324 tccacttgctcctcctcttcct 725345
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 365 tccacttgctcctcctcttcct 386 |||||||||||||||||||||| Sbjct: 682290 tccacttgctcctcctcttcct 682311
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 365 tccacttgctcctcctcttcct 386 |||||||||||||||||||||| Sbjct: 9690570 tccacttgctcctcctcttcct 9690549
>dbj|AP005123.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1015H11 Length = 156897 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 365 tccacttgctcctcctcttcct 386 |||||||||||||||||||||| Sbjct: 88050 tccacttgctcctcctcttcct 88029
>dbj|AK064275.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-F02, full insert sequence Length = 2172 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 365 tccacttgctcctcctcttcct 386 |||||||||||||||||||||| Sbjct: 1796 tccacttgctcctcctcttcct 1775
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 365 tccacttgctcctcctcttcct 386 |||||||||||||||||||||| Sbjct: 682290 tccacttgctcctcctcttcct 682311
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 365 tccacttgctcctcctcttcct 386 |||||||||||||||||||||| Sbjct: 725324 tccacttgctcctcctcttcct 725345
>emb|BX000511.2|CNS08CE1 Oryza sativa chromosome 12, . BAC OJ1136_E08 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 118211 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 365 tccacttgctcctcctcttcct 386 |||||||||||||||||||||| Sbjct: 53810 tccacttgctcctcctcttcct 53789
>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 181322 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 365 tccacttgctcctcctcttcct 386 |||||||||||||||||||||| Sbjct: 60682 tccacttgctcctcctcttcct 60661
>gb|AC115799.10| Mus musculus chromosome 6, clone RP23-406G9, complete sequence Length = 227078 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 360 cctcttccacttgctcctcctcttc 384 |||||||| |||||||||||||||| Sbjct: 100480 cctcttcctcttgctcctcctcttc 100456
>emb|AL355474.15| Human DNA sequence from clone RP11-55C5 on chromosome 10 Contains a novel gene and the 5' end of the FAM13C1 gene for family with sequence similarity 13 member C1, complete sequence Length = 120194 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 386 tggaggaggttctctctgttgtcat 410 ||||||||| ||||||||||||||| Sbjct: 86142 tggaggaggatctctctgttgtcat 86118
>gb|AC158963.3| Mus musculus chromosome 1, clone RP23-321A12, complete sequence Length = 203604 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 354 ctcaagcctcttccacttgctcctcctcttcct 386 |||||||||||||| ||| ||||||||| |||| Sbjct: 72512 ctcaagcctcttcctcttcctcctcctcctcct 72544
>emb|AL389900.2|NCB15I20 Neurospora crassa DNA linkage group II BAC clone B15I20 Length = 47481 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 390 ggaggttctctctgttgtcat 410 ||||||||||||||||||||| Sbjct: 828 ggaggttctctctgttgtcat 808
>gb|AC144905.10| Mus musculus chromosome 1, clone RP23-293I7, complete sequence Length = 215928 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 363 cttccacttgctcctcctcttcctg 387 ||||||||||||||||||| ||||| Sbjct: 166503 cttccacttgctcctcctcatcctg 166479
>dbj|AK091865.1| Homo sapiens cDNA FLJ34546 fis, clone HLUNG2008959 Length = 2105 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 367 cacttgctcctcctcttcctg 387 ||||||||||||||||||||| Sbjct: 983 cacttgctcctcctcttcctg 963
>gb|AC149050.2| Medicago truncatula chromosome 7 BAC clone mth2-6j14, complete sequence Length = 119126 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 360 cctcttccacttgctcctcctcttc 384 |||||||| |||||||||||||||| Sbjct: 91549 cctcttccccttgctcctcctcttc 91573
>gb|AC012668.13| Homo sapiens BAC clone RP11-458D8 from 2, complete sequence Length = 192396 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 367 cacttgctcctcctcttcctg 387 ||||||||||||||||||||| Sbjct: 133850 cacttgctcctcctcttcctg 133870
>gb|AC006205.9| Homo sapiens 12 PAC RP5-1154L15 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 120084 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 362 tcttccacttgctcctcctcttcct 386 |||||||||| |||||||||||||| Sbjct: 17790 tcttccacttcctcctcctcttcct 17814
>gb|AC021054.28| Homo sapiens 12 BAC RP11-218M22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174231 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 362 tcttccacttgctcctcctcttcct 386 |||||||||| |||||||||||||| Sbjct: 138788 tcttccacttcctcctcctcttcct 138812
>gb|AC127372.3| Mus musculus BAC clone RP23-37F11 from chromosome 8, complete sequence Length = 175472 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 360 cctcttccacttgctcctcctcttc 384 |||| |||||||||||||||||||| Sbjct: 32763 cctcctccacttgctcctcctcttc 32739
>emb|AL451011.1|NCB16L14 Neurospora crassa DNA linkage group II BAC clone B16L14 Length = 35066 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 390 ggaggttctctctgttgtcat 410 ||||||||||||||||||||| Sbjct: 10983 ggaggttctctctgttgtcat 11003
>gb|AC131084.13| Mus musculus chromosome 1, clone RP23-450D2, complete sequence Length = 208140 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 354 ctcaagcctcttccacttgctcctcctcttcct 386 |||||||||||||| ||| ||||||||| |||| Sbjct: 113314 ctcaagcctcttcctcttcctcctcctcctcct 113346
>gb|AC140416.2| Mus musculus BAC clone RP24-347A16 from 6, complete sequence Length = 188390 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 361 ctcttccacttgctcctcctcttcc 385 ||||||| ||||||||||||||||| Sbjct: 33067 ctcttccccttgctcctcctcttcc 33043
>emb|AL928538.5| Mouse DNA sequence from clone RP23-102P12 on chromosome X, complete sequence Length = 140604 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 285 gcagacaggagagctgcaccggtgt 309 ||||||||||||||||||| ||||| Sbjct: 24085 gcagacaggagagctgcacaggtgt 24109
>emb|AL844609.6| Mouse DNA sequence from clone RP23-356F8 on chromosome 4, complete sequence Length = 191676 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 358 agcctcttccacttgctcctcctcttcct 386 |||||||||||||| ||||||||| |||| Sbjct: 170146 agcctcttccactttctcctcctcctcct 170174
>ref|NM_120822.3| Arabidopsis thaliana unknown protein AT5G07400 mRNA, complete cds Length = 3558 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 aagcctcttccacttgctcctcctcttc 384 ||||||||||| |||||| ||||||||| Sbjct: 3371 aagcctcttcctcttgcttctcctcttc 3344
>ref|NM_104961.3| Arabidopsis thaliana amine oxidase/ oxidoreductase AT1G62830 mRNA, complete cds Length = 2713 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 358 agcctcttccacttgctcctcctcttcc 385 |||||||||| ||| ||||||||||||| Sbjct: 275 agcctcttcctcttcctcctcctcttcc 302
>gb|AC113987.11| Mus musculus chromosome 9, clone RP24-106M14, complete sequence Length = 170828 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 360 cctcttccacttgctcctcctcttcctg 387 |||||||| ||| ||||||||||||||| Sbjct: 99400 cctcttcctctttctcctcctcttcctg 99427
>gb|AC186003.3| Pan troglodytes BAC clone CH251-72E16 from chromosome 5, complete sequence Length = 191785 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aagcctcttccacttgctcc 376 |||||||||||||||||||| Sbjct: 28898 aagcctcttccacttgctcc 28917
>gb|AC117586.10| Mus musculus chromosome 3, clone RP23-166M8, complete sequence Length = 215166 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 atccacttctggtgcacatc 594 |||||||||||||||||||| Sbjct: 150649 atccacttctggtgcacatc 150630
>gb|AC146191.2| Pan troglodytes BAC clone RP43-25E3 from 7, complete sequence Length = 185364 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 cttgcaggaaaggagatctg 482 |||||||||||||||||||| Sbjct: 62697 cttgcaggaaaggagatctg 62716
>gb|U40238.2| Uncultured crenarchaeote 4B7 40 kb genomic fragment Length = 41327 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 ttcatcccttacatcttcaa 548 |||||||||||||||||||| Sbjct: 38786 ttcatcccttacatcttcaa 38805
>gb|AC121978.2| Mus musculus BAC clone RP24-289K21 from 14, complete sequence Length = 168968 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 ctcttccacttgctcctcct 380 |||||||||||||||||||| Sbjct: 31602 ctcttccacttgctcctcct 31583
>gb|AC009308.3| Homo sapiens BAC clone RP11-299P22 from 7, complete sequence Length = 108182 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 cttgcaggaaaggagatctg 482 |||||||||||||||||||| Sbjct: 209 cttgcaggaaaggagatctg 228
>emb|BX005019.12| Human DNA sequence from clone RP11-490G2 on chromosome 1 Contains the 3' end of a novel gene, complete sequence Length = 36522 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 taacccactcatataaaatg 227 |||||||||||||||||||| Sbjct: 3823 taacccactcatataaaatg 3842
>gb|AY143912.1| Arabidopsis thaliana At1g62830/F23N19_19 mRNA, complete cds Length = 2535 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 358 agcctcttccacttgctcctcctcttcc 385 |||||||||| ||| ||||||||||||| Sbjct: 245 agcctcttcctcttcctcctcctcttcc 272
>ref|NM_001031428.1| Gallus gallus similar to DAZ associated protein 1 (LOC427266), mRNA Length = 2264 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 ctcctcttcctggaggaggt 395 |||||||||||||||||||| Sbjct: 952 ctcctcttcctggaggaggt 933
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 cccatcccgagggagcgtac 31 |||||||||||||||||||| Sbjct: 2860968 cccatcccgagggagcgtac 2860987
>gb|AC153815.7| Mus musculus 6 BAC RP23-205F19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 230983 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 ttcaatgcaaagctcatagt 563 |||||||||||||||||||| Sbjct: 17551 ttcaatgcaaagctcatagt 17570
>emb|AJ719492.1| Gallus gallus mRNA for hypothetical protein, clone 2n4 Length = 2264 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 ctcctcttcctggaggaggt 395 |||||||||||||||||||| Sbjct: 952 ctcctcttcctggaggaggt 933
>emb|AL691510.11| Mouse DNA sequence from clone RP23-125C16 on chromosome 11 Contains a ribosomal protein S6 (Rps6) pseudogene, complete sequence Length = 116174 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 ctcctcctcttcctggagga 392 |||||||||||||||||||| Sbjct: 106579 ctcctcctcttcctggagga 106598
>gb|AC108358.3| Homo sapiens X BAC RP11-420H7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 43632 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 363 cttccacttgctcctcctcttcct 386 ||||||||| |||||||||||||| Sbjct: 5835 cttccacttcctcctcctcttcct 5812
>gb|AC113223.3| Homo sapiens X BAC RP13-597O16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165785 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 363 cttccacttgctcctcctcttcct 386 ||||||||| |||||||||||||| Sbjct: 27897 cttccacttcctcctcctcttcct 27920
>gb|AC020900.5| Homo sapiens chromosome 5 clone CTC-506B8, complete sequence Length = 183768 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aagcctcttccacttgctcc 376 |||||||||||||||||||| Sbjct: 28449 aagcctcttccacttgctcc 28468
>gb|AY074561.1| Arabidopsis thaliana At1g62830/F23N19_19 mRNA, complete cds Length = 2660 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 358 agcctcttccacttgctcctcctcttcc 385 |||||||||| ||| ||||||||||||| Sbjct: 275 agcctcttcctcttcctcctcctcttcc 302
>gb|BT006446.1| Arabidopsis thaliana At5g07400 gene, complete cds Length = 3255 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 aagcctcttccacttgctcctcctcttc 384 ||||||||||| |||||| ||||||||| Sbjct: 3199 aagcctcttcctcttgcttctcctcttc 3172
>gb|AC008906.5|AC008906 Homo sapiens chromosome 5 clone CTD-2260A17, complete sequence Length = 151801 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 aagcctcttccacttgctcc 376 |||||||||||||||||||| Sbjct: 43955 aagcctcttccacttgctcc 43936
>gb|AC007190.4|AC007190 Genomic sequence for Arabidopsis thaliana BAC F23N19 from chromosome I, complete sequence Length = 86801 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 agcctcttccacttgctcctcctcttcc 385 |||||||||| ||| ||||||||||||| Sbjct: 79896 agcctcttcctcttcctcctcctcttcc 79869
>gb|AC009890.12|AC009890 Genomic Sequence For Homo sapiens Clone H_NH0262L04 From Chromosome 18, complete sequence Length = 177223 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 gaacaccatagcttgttgcctggc 343 |||||||||||| ||||||||||| Sbjct: 100870 gaacaccatagcatgttgcctggc 100893
>emb|BX547927.10| Zebrafish DNA sequence from clone CH211-194E15 in linkage group 19, complete sequence Length = 215498 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 ttccacttgctcctcctcttcctg 387 |||||||||| ||||||||||||| Sbjct: 15052 ttccacttgcacctcctcttcctg 15075
>emb|BX000986.4| Zebrafish DNA sequence from clone CH211-210B19 in linkage group 19, complete sequence Length = 151501 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 ttccacttgctcctcctcttcctg 387 |||||||||| ||||||||||||| Sbjct: 18859 ttccacttgcacctcctcttcctg 18836
>dbj|AP006219.1| Homo sapiens genomic DNA, chromosome 18, clone:RP11-243E13, complete sequence Length = 104000 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 320 gaacaccatagcttgttgcctggc 343 |||||||||||| ||||||||||| Sbjct: 7907 gaacaccatagcatgttgcctggc 7884
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 373 ctcctcctcttcctggaggaggttctct 400 ||||||||||||| ||||||| |||||| Sbjct: 1283454 ctcctcctcttccaggaggagtttctct 1283481
>emb|AL163912.1|ATT2I1 Arabidopsis thaliana DNA chromosome 5, BAC clone T2I1 (ESSA project) Length = 116763 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 aagcctcttccacttgctcctcctcttc 384 ||||||||||| |||||| ||||||||| Sbjct: 60434 aagcctcttcctcttgcttctcctcttc 60407
>gb|U97329.1|MNU97329 Makaira nigricans ryanodine receptor RyR1 isoform (RyR1) mRNA, complete cds Length = 16313 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 378 cctcttcctggaggaggttctctctgtt 405 |||||||||||| |||||||| |||||| Sbjct: 1524 cctcttcctggaagaggttctgtctgtt 1497 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,783,651 Number of Sequences: 3902068 Number of extensions: 5783651 Number of successful extensions: 145937 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 145550 Number of HSP's gapped (non-prelim): 385 length of query: 649 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 626 effective length of database: 17,143,297,704 effective search space: 10731704362704 effective search space used: 10731704362704 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)