ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags8c05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_635330.1| Dictyostelium discoideum hypothetical protein (... 40 0.14
2gb|AE000511.1| Helicobacter pylori 26695, complete genome 40 0.14
3emb|AL929048.9| Zebrafish DNA sequence from clone CH211-161N1 in... 38 0.56
4gb|AC152944.2| Mus musculus 10 BAC RP23-427I4 (Roswell Park Canc... 36 2.2
5gb|AC125406.4| Mus musculus BAC clone RP23-32C18 from chromosome... 36 2.2
6gb|AC023285.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 36 2.2
7emb|BX005403.15| Zebrafish DNA sequence from clone DKEY-81J11 in... 36 2.2
8gb|AC116463.9| Mus musculus chromosome 17, clone RP23-30P1, comp... 36 2.2
9gb|AC118020.11| Mus musculus, clone RP23-459B19, complete sequence 36 2.2
10gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome... 36 2.2
11gb|BC021887.1| Mus musculus paraoxonase 2, mRNA (cDNA clone MGC:... 36 2.2
12emb|AL356005.9| Human DNA sequence from clone RP11-54B9 on chrom... 36 2.2
13gb|AC164289.3| Mus musculus BAC clone RP23-380L19 from chromosom... 36 2.2
14gb|AY758359.1| Fragaria x ananassa phospholipase D alpha mRNA, c... 36 2.2
15emb|BX511218.9| Zebrafish DNA sequence from clone DKEY-37K14 in ... 36 2.2
16gb|AC158388.2| Mus musculus BAC clone RP24-545I9 from chromosome... 36 2.2
17dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 36 2.2
18gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 36 2.2
19gb|AC108425.9| Mus musculus chromosome 1, clone RP23-119I1, comp... 34 8.7
20gb|AC149413.2| Phakopsora pachyrhizi clone JGIAFNA-69I19, comple... 34 8.7
21gb|AC117748.13| Mus musculus chromosome 5, clone RP24-317A24, co... 34 8.7
22gb|AC148311.2| Pan troglodytes BAC clone RP43-29P9 from 7, compl... 34 8.7
23gb|AC133206.3| Mus musculus BAC clone RP23-110D10 from chromosom... 34 8.7
24gb|AC073273.9| Homo sapiens BAC clone RP11-643A21 from 7, comple... 34 8.7
25gb|AC146511.3| Pan troglodytes BAC clone RP43-72N15 from 7, comp... 34 8.7
26gb|AC131671.3| Mus musculus BAC clone RP23-312H8 from chromosome... 34 8.7
27gb|AC025448.6| Homo sapiens chromosome 5 clone CTD-2113L7, compl... 34 8.7
28gb|AY263008.1| Anolis strahmi REG631 NADH dehydrogense subunit I... 34 8.7
29gb|AC133572.35| Medicago truncatula clone mth2-10o11, complete s... 34 8.7
30gb|AC151708.6| Medicago truncatula clone mth2-15h5, complete seq... 34 8.7
31emb|BX004881.17| Zebrafish DNA sequence from clone CH211-141M16 ... 34 8.7
32gb|AF540004.1| Caenorhabditis briggsae mesocentin (dig-1) gene, ... 34 8.7
33emb|AL592295.25| Human DNA sequence from clone RP11-122G18 on ch... 34 8.7
34emb|AL590411.7| Human DNA sequence from clone RP11-237J7 on chro... 34 8.7
35emb|AL031003.1|HS422G23 Human DNA sequence from clone RP3-422G23... 34 8.7
36emb|BX571865.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 34 8.7
37emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4,... 34 8.7
38emb|AJ627191.1| Bos taurus mRNA for CD97 antigen transcript vari... 34 8.7
39emb|AJ416058.1|BTA416058 Bos taurus mRNA for CD97 protein 34 8.7
40emb|CR376856.9| Zebrafish DNA sequence from clone CH211-11O22 in... 34 8.7
41emb|CR392365.8| Zebrafish DNA sequence from clone DKEY-171P17 in... 34 8.7
42gb|AC154090.19| Medicago truncatula clone mth2-92k14, complete s... 34 8.7
43gb|AC169788.4| Medicago truncatula clone mth2-28c18, complete se... 34 8.7
44gb|AC010573.4| Drosophila melanogaster 3L BAC RP98-2M13 (Roswell... 34 8.7
45gb|AC069457.5| Drosophila melanogaster 3L BAC RP98-16J19 (Roswel... 34 8.7
46gb|AC134967.20| Medicago truncatula clone mth2-26b8, complete se... 34 8.7
47gb|AC100811.2| Homo sapiens chromosome 8, clone CTD-2532M24, com... 34 8.7
48gb|AC084430.13| Homo sapiens 12p BAC RP11-96B19 (Roswell Park Ca... 34 8.7
49gb|AC018684.3| Homo sapiens BAC clone RP11-424H16 from 10, compl... 34 8.7
50ref|XM_690938.1| PREDICTED: Danio rerio similar to plectin 1 (LO... 34 8.7
51emb|BX323053.6| Zebrafish DNA sequence from clone DKEYP-53E9 in ... 34 8.7
52gb|AF055956.2| Anolis strahmi NADH dehydrogenase subunit II (ND2... 34 8.7
53gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 34 8.7
54emb|BX664603.6| Zebrafish DNA sequence from clone CH211-127L8 in... 34 8.7
55dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 34 8.7
56dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 34 8.7
57ref|NM_176661.1| Bos taurus CD97 antigen (CD97), mRNA 34 8.7
58dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic D... 34 8.7
59dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic D... 34 8.7
60gb|AC116365.2| Homo sapiens chromosome 5 clone RP11-797O11, comp... 34 8.7
61emb|BX248103.7| Zebrafish DNA sequence from clone CH211-226C13 i... 34 8.7
62emb|BX005146.4| Zebrafish DNA sequence from clone CH211-152N19 i... 34 8.7
63emb|AL627435.19| Mouse DNA sequence from clone RP23-3M14 on chro... 34 8.7
64gb|AE003535.3| Drosophila melanogaster chromosome 3L, section 50... 34 8.7
65emb|AL161670.4|CNS01RHD Human chromosome 14 DNA sequence BAC R-8... 34 8.7
66dbj|AP002958.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 34 8.7
67gb|AE016830.1| Enterococcus faecalis V583, complete genome 34 8.7
68emb|AL929590.15| Zebrafish DNA sequence from clone DKEY-46K8 in ... 34 8.7
69gb|AC170159.2| Phakopsora pachyrhizi clone JGIAFNA-57E15, comple... 34 8.7
70gb|AF070718.1|AF070718 Homo sapiens BAC clone 529F11 from 8q21, ... 34 8.7
71emb|AL807770.17| Mouse DNA sequence from clone RP23-206L14 on ch... 34 8.7
72emb|CR456684.10| Zebrafish DNA sequence from clone DKEY-46I8 in ... 34 8.7
73emb|CR956434.13| M.truncatula DNA sequence from clone MTH2-35N9 ... 34 8.7
74dbj|AP006369.1| Lotus japonicus genomic DNA, chromosome 4, clone... 34 8.7
75dbj|AP006368.1| Lotus japonicus genomic DNA, chromosome 2, clone... 34 8.7
76emb|AL807821.8| Mouse DNA sequence from clone RP23-28N5 on chrom... 34 8.7
77gb|AC092470.9| Homo sapiens 12 BAC RP11-72J9 (Roswell Park Cance... 34 8.7
78dbj|AP004283.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 34 8.7 
>ref|XM_635330.1| Dictyostelium discoideum hypothetical protein (DDB0205103), partial
           mRNA
          Length = 1263

 Score = 40.1 bits (20), Expect = 0.14
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  ctacaattttttcatgttct 30
           ||||||||||||||||||||
Sbjct: 127 ctacaattttttcatgttct 108
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>gb|AE000511.1| Helicobacter pylori 26695, complete genome
          Length = 1667867

 Score = 40.1 bits (20), Expect = 0.14
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 10      cctacaattttttcatgttc 29
               ||||||||||||||||||||
Sbjct: 1339756 cctacaattttttcatgttc 1339737



 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                               
Query: 6      atgccctacaatttttt 22
              |||||||||||||||||
Sbjct: 833071 atgccctacaatttttt 833055
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>emb|AL929048.9| Zebrafish DNA sequence from clone CH211-161N1 in linkage group 20,
             complete sequence
          Length = 149801

 Score = 38.2 bits (19), Expect = 0.56
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 12    tacaattttttcatgttct 30
             |||||||||||||||||||
Sbjct: 10060 tacaattttttcatgttct 10042
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>gb|AC152944.2| Mus musculus 10 BAC RP23-427I4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 179149

 Score = 36.2 bits (18), Expect = 2.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 4      taatgccctacaattttt 21
              ||||||||||||||||||
Sbjct: 168896 taatgccctacaattttt 168879
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>gb|AC125406.4| Mus musculus BAC clone RP23-32C18 from chromosome 19, complete sequence
          Length = 208557

 Score = 36.2 bits (18), Expect = 2.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 3     ttaatgccctacaatttt 20
             ||||||||||||||||||
Sbjct: 94536 ttaatgccctacaatttt 94519
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>gb|AC023285.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-333I11, complete
             sequence
          Length = 192255

 Score = 36.2 bits (18), Expect = 2.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 9     ccctacaattttttcatg 26
             ||||||||||||||||||
Sbjct: 53652 ccctacaattttttcatg 53635
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>emb|BX005403.15| Zebrafish DNA sequence from clone DKEY-81J11 in linkage group 17,
             complete sequence
          Length = 74369

 Score = 36.2 bits (18), Expect = 2.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 11    ctacaattttttcatgtt 28
             ||||||||||||||||||
Sbjct: 61089 ctacaattttttcatgtt 61072
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>gb|AC116463.9| Mus musculus chromosome 17, clone RP23-30P1, complete sequence
          Length = 237187

 Score = 36.2 bits (18), Expect = 2.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 11    ctacaattttttcatgtt 28
             ||||||||||||||||||
Sbjct: 69318 ctacaattttttcatgtt 69301
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>gb|AC118020.11| Mus musculus, clone RP23-459B19, complete sequence
          Length = 191669

 Score = 36.2 bits (18), Expect = 2.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 4      taatgccctacaattttt 21
              ||||||||||||||||||
Sbjct: 136120 taatgccctacaattttt 136137
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>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0074L11, complete sequence
          Length = 180703

 Score = 36.2 bits (18), Expect = 2.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 11     ctacaattttttcatgtt 28
              ||||||||||||||||||
Sbjct: 121204 ctacaattttttcatgtt 121221
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>gb|BC021887.1| Mus musculus paraoxonase 2, mRNA (cDNA clone MGC:11614
            IMAGE:3154583), complete cds
          Length = 2710

 Score = 36.2 bits (18), Expect = 2.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 9    ccctacaattttttcatg 26
            ||||||||||||||||||
Sbjct: 2261 ccctacaattttttcatg 2278
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>emb|AL356005.9| Human DNA sequence from clone RP11-54B9 on chromosome 1 Contains a
             pseudogene similar to flavin-containing monooxygenase
             proteins, a ribosomal protein L4 (RPL4) pseudogene and the
             5' end of a pseudogene similar to flavin-containing
             monooxygenase proteins, complete sequence
          Length = 118425

 Score = 36.2 bits (18), Expect = 2.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 11    ctacaattttttcatgtt 28
             ||||||||||||||||||
Sbjct: 66768 ctacaattttttcatgtt 66785
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>gb|AC164289.3| Mus musculus BAC clone RP23-380L19 from chromosome 6, complete
           sequence
          Length = 212908

 Score = 36.2 bits (18), Expect = 2.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 9   ccctacaattttttcatg 26
           ||||||||||||||||||
Sbjct: 836 ccctacaattttttcatg 853
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>gb|AY758359.1| Fragaria x ananassa phospholipase D alpha mRNA, complete cds
          Length = 2874

 Score = 36.2 bits (18), Expect = 2.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 11  ctacaattttttcatgtt 28
           ||||||||||||||||||
Sbjct: 623 ctacaattttttcatgtt 640
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>emb|BX511218.9| Zebrafish DNA sequence from clone DKEY-37K14 in linkage group 17,
              complete sequence
          Length = 152316

 Score = 36.2 bits (18), Expect = 2.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 11     ctacaattttttcatgtt 28
              ||||||||||||||||||
Sbjct: 133700 ctacaattttttcatgtt 133717
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>gb|AC158388.2| Mus musculus BAC clone RP24-545I9 from chromosome 14, complete sequence
          Length = 183148

 Score = 36.2 bits (18), Expect = 2.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 12    tacaattttttcatgttc 29
             ||||||||||||||||||
Sbjct: 53805 tacaattttttcatgttc 53822
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 36.2 bits (18), Expect = 2.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 11       ctacaattttttcatgtt 28
                ||||||||||||||||||
Sbjct: 21769151 ctacaattttttcatgtt 21769168
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 36.2 bits (18), Expect = 2.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 11       ctacaattttttcatgtt 28
                ||||||||||||||||||
Sbjct: 22079350 ctacaattttttcatgtt 22079367
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>gb|AC108425.9| Mus musculus chromosome 1, clone RP23-119I1, complete sequence
          Length = 187230

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                
Query: 7   tgccctacaattttttcatgt 27
           ||||||| |||||||||||||
Sbjct: 124 tgccctataattttttcatgt 144
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>gb|AC149413.2| Phakopsora pachyrhizi clone JGIAFNA-69I19, complete sequence
          Length = 35202

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                              
Query: 9     ccctacaattttttcat 25
             |||||||||||||||||
Sbjct: 29297 ccctacaattttttcat 29281
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>gb|AC117748.13| Mus musculus chromosome 5, clone RP24-317A24, complete sequence
          Length = 180438

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                               
Query: 7      tgccctacaattttttc 23
              |||||||||||||||||
Sbjct: 118940 tgccctacaattttttc 118924
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>gb|AC148311.2| Pan troglodytes BAC clone RP43-29P9 from 7, complete sequence
          Length = 161683

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                              
Query: 12    tacaattttttcatgtt 28
             |||||||||||||||||
Sbjct: 92414 tacaattttttcatgtt 92398
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>gb|AC133206.3| Mus musculus BAC clone RP23-110D10 from chromosome 1, complete sequence
          Length = 177383

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                  
Query: 7     tgccctacaattttttcatgt 27
             ||||||| |||||||||||||
Sbjct: 69643 tgccctataattttttcatgt 69623
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>gb|AC073273.9| Homo sapiens BAC clone RP11-643A21 from 7, complete sequence
          Length = 152884

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                              
Query: 12    tacaattttttcatgtt 28
             |||||||||||||||||
Sbjct: 31949 tacaattttttcatgtt 31933
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>gb|AC146511.3| Pan troglodytes BAC clone RP43-72N15 from 7, complete sequence
          Length = 192395

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                              
Query: 12    tacaattttttcatgtt 28
             |||||||||||||||||
Sbjct: 85942 tacaattttttcatgtt 85958
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>gb|AC131671.3| Mus musculus BAC clone RP23-312H8 from chromosome 3, complete sequence
          Length = 195851

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                              
Query: 12    tacaattttttcatgtt 28
             |||||||||||||||||
Sbjct: 44976 tacaattttttcatgtt 44960
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>gb|AC025448.6| Homo sapiens chromosome 5 clone CTD-2113L7, complete sequence
          Length = 164190

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                              
Query: 12    tacaattttttcatgtt 28
             |||||||||||||||||
Sbjct: 14386 tacaattttttcatgtt 14402
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>gb|AY263008.1| Anolis strahmi REG631 NADH dehydrogense subunit I (ND1) gene,
           partial cds; tRNA-Ile, tRNA-Glx, and tRNA-Met genes,
           complete sequence; NADH dehydrogenase subunit II (ND2)
           gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asx,
           tRNA-Cys, and tRNA-Tyr genes, complete sequence; and
           cytochrome oxidase subunit I (CO1) gene, partial cds;
           mitochondrial genes for mitochondrial products
          Length = 1914

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 8   gccctacaattttttca 24
           |||||||||||||||||
Sbjct: 476 gccctacaattttttca 492
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>gb|AC133572.35| Medicago truncatula clone mth2-10o11, complete sequence
          Length = 108164

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                 
Query: 2    attaatgccctacaatttttt 22
            ||||||||||| |||||||||
Sbjct: 5130 attaatgccctccaatttttt 5110
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>gb|AC151708.6| Medicago truncatula clone mth2-15h5, complete sequence
          Length = 86100

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                              
Query: 14    caattttttcatgttct 30
             |||||||||||||||||
Sbjct: 62037 caattttttcatgttct 62021
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>emb|BX004881.17| Zebrafish DNA sequence from clone CH211-141M16 in linkage group 13,
             complete sequence
          Length = 189908

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                              
Query: 12    tacaattttttcatgtt 28
             |||||||||||||||||
Sbjct: 20037 tacaattttttcatgtt 20021
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>gb|AF540004.1| Caenorhabditis briggsae mesocentin (dig-1) gene, complete cds
          Length = 58156

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                              
Query: 9     ccctacaattttttcat 25
             |||||||||||||||||
Sbjct: 11019 ccctacaattttttcat 11035
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>emb|AL592295.25| Human DNA sequence from clone RP11-122G18 on chromosome 1 Contains the
             3' end of a novel gene, the MPZ gene for myelin protein
             zero (Charcot-Marie-Tooth neuropathy 1B), the SDHC gene
             for succinate dehydrogenase complex subunit C  integral
             membrane protein 15kDa, the gene for a novel protein, a
             novel gene, a pseudogene similar to part of ribonucleotide
             reductase M2 polypeptide (RRM2), a ribosomal protein S2
             (RPS2) pseudogene and two CpG islands, complete sequence
          Length = 162189

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                              
Query: 12    tacaattttttcatgtt 28
             |||||||||||||||||
Sbjct: 74214 tacaattttttcatgtt 74230
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>emb|AL590411.7| Human DNA sequence from clone RP11-237J7 on chromosome 10 Contains two
              CpG islands, complete sequence
          Length = 128435

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                               
Query: 12     tacaattttttcatgtt 28
              |||||||||||||||||
Sbjct: 106933 tacaattttttcatgtt 106917
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>emb|AL031003.1|HS422G23 Human DNA sequence from clone RP3-422G23 on chromosome 6q24 Contains the
              gene for KIAA1244 protein, a macrophage myristoylated
              alanine-rich C kinase substrate (MACMARCKS) pseudogene, a
              pseudogene similar to Mus musculus upregulated during
              skeletal muscle growth 5 (Usmg5), the gene for chromosome 6
              open reading frame 34 (C6orf34) (SOUL) and a CpG island,
              complete sequence
          Length = 159344

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                               
Query: 11     ctacaattttttcatgt 27
              |||||||||||||||||
Sbjct: 148567 ctacaattttttcatgt 148583
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>emb|BX571865.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
             7/17
          Length = 348813

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                              
Query: 12    tacaattttttcatgtt 28
             |||||||||||||||||
Sbjct: 24446 tacaattttttcatgtt 24462
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>emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020J19,
              complete sequence
          Length = 123272

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                               
Query: 6      atgccctacaatttttt 22
              |||||||||||||||||
Sbjct: 106365 atgccctacaatttttt 106349
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>emb|AJ627191.1| Bos taurus mRNA for CD97 antigen transcript variant (cd97 gene)
          Length = 3125

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                             
Query: 14   caattttttcatgttct 30
            |||||||||||||||||
Sbjct: 1303 caattttttcatgttct 1287
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>emb|AJ416058.1|BTA416058 Bos taurus mRNA for CD97 protein
          Length = 2205

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                            
Query: 14  caattttttcatgttct 30
           |||||||||||||||||
Sbjct: 972 caattttttcatgttct 956
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>emb|CR376856.9| Zebrafish DNA sequence from clone CH211-11O22 in linkage group 9,
              complete sequence
          Length = 179053

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                               
Query: 14     caattttttcatgttct 30
              |||||||||||||||||
Sbjct: 102124 caattttttcatgttct 102108
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>emb|CR392365.8| Zebrafish DNA sequence from clone DKEY-171P17 in linkage group 5,
              complete sequence
          Length = 168716

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                               
Query: 6      atgccctacaatttttt 22
              |||||||||||||||||
Sbjct: 165350 atgccctacaatttttt 165334
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>gb|AC154090.19| Medicago truncatula clone mth2-92k14, complete sequence
          Length = 117932

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                               
Query: 14     caattttttcatgttct 30
              |||||||||||||||||
Sbjct: 115851 caattttttcatgttct 115835
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>gb|AC169788.4| Medicago truncatula clone mth2-28c18, complete sequence
          Length = 122876

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                              
Query: 14    caattttttcatgttct 30
             |||||||||||||||||
Sbjct: 50718 caattttttcatgttct 50702
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>gb|AC010573.4| Drosophila melanogaster 3L BAC RP98-2M13 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 181927

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                   
Query: 5      aatgccctacaattttttcat 25
              |||||||||||||| ||||||
Sbjct: 154856 aatgccctacaattgtttcat 154836
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>gb|AC069457.5| Drosophila melanogaster 3L BAC RP98-16J19 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 160366

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                  
Query: 5     aatgccctacaattttttcat 25
             |||||||||||||| ||||||
Sbjct: 86056 aatgccctacaattgtttcat 86036
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>gb|AC134967.20| Medicago truncatula clone mth2-26b8, complete sequence
          Length = 133030

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                              
Query: 14    caattttttcatgttct 30
             |||||||||||||||||
Sbjct: 70987 caattttttcatgttct 71003
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>gb|AC100811.2| Homo sapiens chromosome 8, clone CTD-2532M24, complete sequence
          Length = 194254

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                               
Query: 12     tacaattttttcatgtt 28
              |||||||||||||||||
Sbjct: 148464 tacaattttttcatgtt 148448
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>gb|AC084430.13| Homo sapiens 12p BAC RP11-96B19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 72022

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                              
Query: 4     taatgccctacaatttt 20
             |||||||||||||||||
Sbjct: 30714 taatgccctacaatttt 30730
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>gb|AC018684.3| Homo sapiens BAC clone RP11-424H16 from 10, complete sequence
          Length = 175968

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                              
Query: 6     atgccctacaatttttt 22
             |||||||||||||||||
Sbjct: 84354 atgccctacaatttttt 84370
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>ref|XM_690938.1| PREDICTED: Danio rerio similar to plectin 1 (LOC567639), partial mRNA
          Length = 9966

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                             
Query: 14   caattttttcatgttct 30
            |||||||||||||||||
Sbjct: 3204 caattttttcatgttct 3188
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>emb|BX323053.6| Zebrafish DNA sequence from clone DKEYP-53E9 in linkage group 12,
             complete sequence
          Length = 92153

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                              
Query: 12    tacaattttttcatgtt 28
             |||||||||||||||||
Sbjct: 38974 tacaattttttcatgtt 38990
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>gb|AF055956.2| Anolis strahmi NADH dehydrogenase subunit II (ND2) gene, complete
          cds; tRNA-Trp, tRNA-Ala, tRNA-Asn, tRNA-Cys, and
          tRNA-Tyr genes, complete sequence; and cytochrome
          oxidase subunit I gene, partial cds; mitochondrial
          genes for mitochondrial products
          Length = 1420

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                           
Query: 8  gccctacaattttttca 24
          |||||||||||||||||
Sbjct: 5  gccctacaattttttca 21
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>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 14      caattttttcatgttct 30
               |||||||||||||||||
Sbjct: 4822753 caattttttcatgttct 4822737
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>emb|BX664603.6| Zebrafish DNA sequence from clone CH211-127L8 in linkage group 7,
              complete sequence
          Length = 190963

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                               
Query: 13     acaattttttcatgttc 29
              |||||||||||||||||
Sbjct: 163697 acaattttttcatgttc 163681
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                 
Query: 6        atgccctacaatttttt 22
                |||||||||||||||||
Sbjct: 35481562 atgccctacaatttttt 35481546
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                                
Query: 14      caattttttcatgttct 30
               |||||||||||||||||
Sbjct: 7254230 caattttttcatgttct 7254246
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>ref|NM_176661.1| Bos taurus CD97 antigen (CD97), mRNA
          Length = 2205

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                            
Query: 14  caattttttcatgttct 30
           |||||||||||||||||
Sbjct: 972 caattttttcatgttct 956
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>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0485D09
          Length = 150594

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                               
Query: 14     caattttttcatgttct 30
              |||||||||||||||||
Sbjct: 148878 caattttttcatgttct 148894
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>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0431F01
          Length = 143209

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                              
Query: 14    caattttttcatgttct 30
             |||||||||||||||||
Sbjct: 55660 caattttttcatgttct 55676
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>gb|AC116365.2| Homo sapiens chromosome 5 clone RP11-797O11, complete sequence
          Length = 117723

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                              
Query: 12    tacaattttttcatgtt 28
             |||||||||||||||||
Sbjct: 26912 tacaattttttcatgtt 26896
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>emb|BX248103.7| Zebrafish DNA sequence from clone CH211-226C13 in linkage group 5,
             complete sequence
          Length = 66173

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                              
Query: 12    tacaattttttcatgtt 28
             |||||||||||||||||
Sbjct: 15329 tacaattttttcatgtt 15313
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>emb|BX005146.4| Zebrafish DNA sequence from clone CH211-152N19 in linkage group 3,
             complete sequence
          Length = 180858

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                              
Query: 14    caattttttcatgttct 30
             |||||||||||||||||
Sbjct: 84384 caattttttcatgttct 84400
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>emb|AL627435.19| Mouse DNA sequence from clone RP23-3M14 on chromosome X, complete
             sequence
          Length = 199970

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                              
Query: 14    caattttttcatgttct 30
             |||||||||||||||||
Sbjct: 60865 caattttttcatgttct 60881
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>gb|AE003535.3| Drosophila melanogaster chromosome 3L, section 50 of 83 of the complete
              sequence
          Length = 278708

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                   
Query: 5      aatgccctacaattttttcat 25
              |||||||||||||| ||||||
Sbjct: 137453 aatgccctacaattgtttcat 137433
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>emb|AL161670.4|CNS01RHD Human chromosome 14 DNA sequence BAC R-804M7 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 163923

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                              
Query: 9     ccctacaattttttcat 25
             |||||||||||||||||
Sbjct: 23163 ccctacaattttttcat 23179
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>dbj|AP002958.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-16H7, complete
             sequence
          Length = 72000

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                              
Query: 12    tacaattttttcatgtt 28
             |||||||||||||||||
Sbjct: 65006 tacaattttttcatgtt 64990
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>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                                
Query: 14      caattttttcatgttct 30
               |||||||||||||||||
Sbjct: 1418132 caattttttcatgttct 1418116
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>emb|AL929590.15| Zebrafish DNA sequence from clone DKEY-46K8 in linkage group 5,
             complete sequence
          Length = 163866

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                              
Query: 12    tacaattttttcatgtt 28
             |||||||||||||||||
Sbjct: 50897 tacaattttttcatgtt 50913
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>gb|AC170159.2| Phakopsora pachyrhizi clone JGIAFNA-57E15, complete sequence
          Length = 39565

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                              
Query: 9     ccctacaattttttcat 25
             |||||||||||||||||
Sbjct: 30446 ccctacaattttttcat 30462
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>gb|AF070718.1|AF070718 Homo sapiens BAC clone 529F11 from 8q21, complete sequence
          Length = 166832

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                              
Query: 12    tacaattttttcatgtt 28
             |||||||||||||||||
Sbjct: 41934 tacaattttttcatgtt 41950
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>emb|AL807770.17| Mouse DNA sequence from clone RP23-206L14 on chromosome 4, complete
             sequence
          Length = 114089

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                              
Query: 2     attaatgccctacaatt 18
             |||||||||||||||||
Sbjct: 78220 attaatgccctacaatt 78204
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>emb|CR456684.10| Zebrafish DNA sequence from clone DKEY-46I8 in linkage group 12,
             complete sequence
          Length = 262809

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                              
Query: 12    tacaattttttcatgtt 28
             |||||||||||||||||
Sbjct: 42383 tacaattttttcatgtt 42399
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>emb|CR956434.13| M.truncatula DNA sequence from clone MTH2-35N9 on chromosome 3,
             complete sequence
          Length = 113074

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                  
Query: 2     attaatgccctacaatttttt 22
             ||||||||||| |||||||||
Sbjct: 85890 attaatgccctccaatttttt 85870
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>dbj|AP006369.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT20N03, TM0212,
             complete sequence
          Length = 87407

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                              
Query: 4     taatgccctacaatttt 20
             |||||||||||||||||
Sbjct: 61559 taatgccctacaatttt 61543
to top
>dbj|AP006368.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT21K08, TM0191,
            complete sequence
          Length = 76693

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                             
Query: 14   caattttttcatgttct 30
            |||||||||||||||||
Sbjct: 7508 caattttttcatgttct 7492
to top
>emb|AL807821.8| Mouse DNA sequence from clone RP23-28N5 on chromosome X, complete
              sequence
          Length = 171451

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                               
Query: 9      ccctacaattttttcat 25
              |||||||||||||||||
Sbjct: 117727 ccctacaattttttcat 117743
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>gb|AC092470.9| Homo sapiens 12 BAC RP11-72J9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 96100

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                              
Query: 11    ctacaattttttcatgt 27
             |||||||||||||||||
Sbjct: 54514 ctacaattttttcatgt 54498
to top
>dbj|AP004283.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1187A6
          Length = 157390

 Score = 34.2 bits (17), Expect = 8.7
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                              
Query: 12    tacaattttttcatgtt 28
             |||||||||||||||||
Sbjct: 66856 tacaattttttcatgtt 66872


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 411,977
Number of Sequences: 3902068
Number of extensions: 411977
Number of successful extensions: 129893
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 129502
Number of HSP's gapped (non-prelim): 391
length of query: 30
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 10
effective length of database: 17,155,003,908
effective search space: 171550039080
effective search space used: 171550039080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)
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