ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags8c03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|U60754.1|TAU60754 Triticum aestivum delta-24-sterol methyltra... 513 e-142
2ref|XM_477078.1| Oryza sativa (japonica cultivar-group), mRNA 224 3e-55
3dbj|AK100653.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 3e-55
4dbj|AK072893.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 3e-55
5gb|U60755.1|TAU60755 Triticum aestivum delta-24-sterol methyltra... 220 4e-54
6gb|AF045570.1|AF045570 Zea mays (S)-adenosyl-L-methionine:delta ... 218 2e-53
7gb|AY103656.1| Zea mays PCO072714 mRNA sequence 210 4e-51
8gb|U79669.1|ZMU79669 Zea mays endosperm C-24 sterol methyltransf... 210 4e-51
9gb|BT018799.1| Zea mays clone EL01N0528H08.d mRNA sequence 194 2e-46
10gb|AF042332.1|AF042332 Oryza sativa subsp. japonica cycloartenol... 129 1e-26
11dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
12dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
13gb|U81312.1|NTU81312 Nicotiana tabacum S-adenosyl-methionine-ste... 70 1e-08
14gb|BT013908.1| Lycopersicon esculentum clone 132905F, mRNA sequence 62 2e-06
15gb|CP000114.1| Streptococcus agalactiae A909, complete genome 44 0.56
16gb|AE014270.1| Streptococcus agalactiae 2603V/R section 80 of 10... 44 0.56
17emb|AL766853.1|SAG766853 Streptococcus agalactiae NEM316 complet... 44 0.56
18gb|AC026403.4| Homo sapiens chromosome 5 clone CTB-63M22, comple... 44 0.56
19gb|AC167812.4| Mus musculus BAC clone RP24-299F5 from chromosome... 42 2.2
20emb|AL355475.7| Human DNA sequence from clone RP1-241M7 on chrom... 42 2.2
21emb|AL162417.23| Human DNA sequence from clone RP11-326L24 on ch... 42 2.2
22dbj|AK079117.1| Mus musculus 12 days embryo embryonic body betwe... 42 2.2
23gb|AC114924.5| Mus musculus BAC clone RP23-424D3 from 18, comple... 42 2.2
24gb|AC001643.1|AC001643 Genomic sequence from Human 9q34, complet... 42 2.2
25gb|AE009148.1| Agrobacterium tumefaciens str. C58 circular chrom... 40 8.7
26gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 8.7
27ref|XM_846462.1| PREDICTED: Canis familiaris similar to spectrin... 40 8.7
28ref|XM_546643.2| PREDICTED: Canis familiaris similar to spectrin... 40 8.7
29ref|XM_858856.1| PREDICTED: Canis familiaris similar to spectrin... 40 8.7
30emb|BX936358.10| Zebrafish DNA sequence from clone CH211-159A10 ... 40 8.7
31gb|AC149594.2| Xenopus tropicalis chromosome CH216-62P2, complet... 40 8.7
32gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 40 8.7
33dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
34dbj|AP003140.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
35emb|CR847509.9| Zebrafish DNA sequence from clone DKEY-29B22 in ... 40 8.7

>gb|U60754.1|TAU60754 Triticum aestivum delta-24-sterol methyltransferase (TA-MT) mRNA,
            complete cds
          Length = 1392

 Score =  513 bits (259), Expect = e-142
 Identities = 327/348 (93%), Gaps = 10/348 (2%)
 Strand = Plus / Minus

                                                                        
Query: 298  caagcccgcttcttcaaaatgcatctttgc-----ctgaaagttgcttgctcattccgaa 352
            ||||||||||||||||||||||||||||||     |||||||    |||||||||| |||
Sbjct: 1163 caagcccgcttcttcaaaatgcatctttgcattgcctgaaag----ttgctcattctgaa 1108

                                                                        
Query: 353  agaggcttccgaaccacaaagaagtacatcggggtgaagatttccttcttgccaccttcg 412
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1107 agaggcttccgaaccacaaagaagtacaccggggtgaagatttccttcttgccaccttcg 1048

                                                                        
Query: 413  acaagaccttctgcggccttctctaagaaactagagaccctctggctgccttcaggagct 472
            ||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| 
Sbjct: 1047 acaagaccttccgcggccttctctaagaagctagagaccctctggctgccttccggagcc 988

                                                                        
Query: 473  agaccaacgtattccaatgccttgaccatattgcgagtaattattcgtcccatggtagtc 532
            |||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 987  agaccaacatattccaataccttgaccatattgcgagtaattattcgtcccacggtagtc 928

                                                                        
Query: 533  aaccggaaactactcaatgaaaaccgacttgggtccaagggcaagtaccaaggcaatgga 592
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927  aaccggaaactactcaaagaaaaccgacttgggtccaagggcaagtaccaaggcaatgga 868

                                                            
Query: 593  gaatcttcagcaagnatccttatcccaaataacctcaaacccagcatc 640
            |||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 867  gaatcttcagcaag-atccttgtcccaaataacctcaaacccagcatc 821



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                        
Query: 95   gggaggaaaactgcaactagcttatttatgccactaatagcttaccacaatggtctcaaa 154
            |||| |||||||||| |||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 1376 gggaagaaaactgcatctagcttatttatgccactaatagcttagcacaatggtgtcaaa 1317

                         
Query: 155  ctgtccgttaatc 167
            | ||| |||||||
Sbjct: 1316 cagtcagttaatc 1304



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>ref|XM_477078.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1525

 Score =  224 bits (113), Expect = 3e-55
 Identities = 254/300 (84%), Gaps = 1/300 (0%)
 Strand = Plus / Minus

                                                                        
Query: 341  gctcattccgaaagaggcttccgaaccacaaagaagtacatcggggtgaagatttccttc 400
            |||||||| || | |||||| ||||||| ||||||||||||||| |||||||||||||||
Sbjct: 1140 gctcattctgagataggcttgcgaaccaaaaagaagtacatcggcgtgaagatttccttc 1081

                                                                        
Query: 401  ttgccaccttcgacaagaccttctgcggccttctctaagaaactagagaccctctggctg 460
            |||||||||||||| |||||||| || ||||||||||| ||  |||| ||||| |  || 
Sbjct: 1080 ttgccaccttcgacgagaccttcagctgccttctctaaaaagttagataccctttcactt 1021

                                                                        
Query: 461  ccttcaggagctagaccaacgtattccaatgccttgaccatattgcgagtaattattcgt 520
            ||||  || || || || ||||||||||||||||| |||||  |||||||||||   || 
Sbjct: 1020 ccttgtggggcaaggccgacgtattccaatgccttcaccattgtgcgagtaattgcacgc 961

                                                                        
Query: 521  cccatggtagtcaaccggaaactactcaatgaaaaccgacttgggtccaagggcaagtac 580
            ||||  |||||||  ||||| |||||||| |||||||| ||||| |||||||||| ||||
Sbjct: 960  cccacagtagtcagacggaagctactcaaggaaaaccggcttggatccaagggcaggtac 901

                                                                        
Query: 581  caaggcaatggagaatcttcagcaagnatccttatcccaaataacctcaaacccagcatc 640
            ||||| |  || ||||||||||||||  || |||||||||||||||||||||||||||||
Sbjct: 900  caaggaaccggggaatcttcagcaagg-tctttatcccaaataacctcaaacccagcatc 842



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>dbj|AK100653.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111D19, full
            insert sequence
          Length = 2883

 Score =  224 bits (113), Expect = 3e-55
 Identities = 254/300 (84%), Gaps = 1/300 (0%)
 Strand = Plus / Minus

                                                                        
Query: 341  gctcattccgaaagaggcttccgaaccacaaagaagtacatcggggtgaagatttccttc 400
            |||||||| || | |||||| ||||||| ||||||||||||||| |||||||||||||||
Sbjct: 2597 gctcattctgagataggcttgcgaaccaaaaagaagtacatcggcgtgaagatttccttc 2538

                                                                        
Query: 401  ttgccaccttcgacaagaccttctgcggccttctctaagaaactagagaccctctggctg 460
            |||||||||||||| |||||||| || ||||||||||| ||  |||| ||||| |  || 
Sbjct: 2537 ttgccaccttcgacgagaccttcagctgccttctctaaaaagttagataccctttcactt 2478

                                                                        
Query: 461  ccttcaggagctagaccaacgtattccaatgccttgaccatattgcgagtaattattcgt 520
            ||||  || || || || ||||||||||||||||| |||||  |||||||||||   || 
Sbjct: 2477 ccttgtggggcaaggccgacgtattccaatgccttcaccattgtgcgagtaattgcacgc 2418

                                                                        
Query: 521  cccatggtagtcaaccggaaactactcaatgaaaaccgacttgggtccaagggcaagtac 580
            ||||  |||||||  ||||| |||||||| |||||||| ||||| |||||||||| ||||
Sbjct: 2417 cccacagtagtcagacggaagctactcaaggaaaaccggcttggatccaagggcaggtac 2358

                                                                        
Query: 581  caaggcaatggagaatcttcagcaagnatccttatcccaaataacctcaaacccagcatc 640
            ||||| |  || ||||||||||||||  || |||||||||||||||||||||||||||||
Sbjct: 2357 caaggaaccggggaatcttcagcaagg-tctttatcccaaataacctcaaacccagcatc 2299



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>dbj|AK072893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149L23, full
            insert sequence
          Length = 1526

 Score =  224 bits (113), Expect = 3e-55
 Identities = 254/300 (84%), Gaps = 1/300 (0%)
 Strand = Plus / Minus

                                                                        
Query: 341  gctcattccgaaagaggcttccgaaccacaaagaagtacatcggggtgaagatttccttc 400
            |||||||| || | |||||| ||||||| ||||||||||||||| |||||||||||||||
Sbjct: 1141 gctcattctgagataggcttgcgaaccaaaaagaagtacatcggcgtgaagatttccttc 1082

                                                                        
Query: 401  ttgccaccttcgacaagaccttctgcggccttctctaagaaactagagaccctctggctg 460
            |||||||||||||| |||||||| || ||||||||||| ||  |||| ||||| |  || 
Sbjct: 1081 ttgccaccttcgacgagaccttcagctgccttctctaaaaagttagataccctttcactt 1022

                                                                        
Query: 461  ccttcaggagctagaccaacgtattccaatgccttgaccatattgcgagtaattattcgt 520
            ||||  || || || || ||||||||||||||||| |||||  |||||||||||   || 
Sbjct: 1021 ccttgtggggcaaggccgacgtattccaatgccttcaccattgtgcgagtaattgcacgc 962

                                                                        
Query: 521  cccatggtagtcaaccggaaactactcaatgaaaaccgacttgggtccaagggcaagtac 580
            ||||  |||||||  ||||| |||||||| |||||||| ||||| |||||||||| ||||
Sbjct: 961  cccacagtagtcagacggaagctactcaaggaaaaccggcttggatccaagggcaggtac 902

                                                                        
Query: 581  caaggcaatggagaatcttcagcaagnatccttatcccaaataacctcaaacccagcatc 640
            ||||| |  || ||||||||||||||  || |||||||||||||||||||||||||||||
Sbjct: 901  caaggaaccggggaatcttcagcaagg-tctttatcccaaataacctcaaacccagcatc 843



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>gb|U60755.1|TAU60755 Triticum aestivum delta-24-sterol methyltransferase (TA-MT) gene,
            complete cds
          Length = 4749

 Score =  220 bits (111), Expect = 4e-54
 Identities = 127/131 (96%), Gaps = 1/131 (0%)
 Strand = Plus / Minus

                                                                        
Query: 497  accatattgcgagtaattattcgtcccatggtagtcaaccggaaactactcaatgaaaac 556
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 3534 accatattgcgagtaattattcgtcccacggtagtcaaccggaaactactcaatgaaaac 3475

                                                                        
Query: 557  cgacttgggtccaagggcaagtaccaaggcaatggagaatcttcagcaagnatccttatc 616
            |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 3474 cgacttgggtccaagggcaagtaccaaggcaacggagaatcttcagcaag-atccttgtc 3416

                       
Query: 617  ccaaataacct 627
            |||||||||||
Sbjct: 3415 ccaaataacct 3405



 Score =  151 bits (76), Expect = 3e-33
 Identities = 94/100 (94%)
 Strand = Plus / Minus

                                                                        
Query: 400  cttgccaccttcgacaagaccttctgcggccttctctaagaaactagagaccctctggct 459
            |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 4538 cttgccaccttcaacaagaccttccgcggccttctctaagaaactagagaccctctggct 4479

                                                    
Query: 460  gccttcaggagctagaccaacgtattccaatgccttgacc 499
            |||||| ||||| |||||||| ||||||||| ||||||||
Sbjct: 4478 gccttccggagccagaccaacatattccaataccttgacc 4439



 Score =  107 bits (54), Expect = 4e-20
 Identities = 57/58 (98%)
 Strand = Plus / Minus

                                                                      
Query: 343  tcattccgaaagaggcttccgaaccacaaagaagtacatcggggtgaagatttccttc 400
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4749 tcattctgaaagaggcttccgaaccacaaagaagtacatcggggtgaagatttccttc 4692



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>gb|AF045570.1|AF045570 Zea mays (S)-adenosyl-L-methionine:delta 24-sterol methyltransferase
            mRNA, complete cds
          Length = 1497

 Score =  218 bits (110), Expect = 2e-53
 Identities = 249/294 (84%), Gaps = 1/294 (0%)
 Strand = Plus / Minus

                                                                        
Query: 341  gctcattccgaaagaggcttccgaaccacaaagaagtacatcggggtgaagatttccttc 400
            |||||||||  ||||||||||||||| | |||||||||||| || |||||||| ||||||
Sbjct: 1102 gctcattccagaagaggcttccgaacaaaaaagaagtacattggcgtgaagatctccttc 1043

                                                                        
Query: 401  ttgccaccttcgacaagaccttctgcggccttctctaagaaactagagaccctctggctg 460
            || || || || || || |||||||| |||||||| | |||||||||||||||||  |||
Sbjct: 1042 tttccgccctctaccagcccttctgcagccttctccaggaaactagagaccctctcactg 983

                                                                        
Query: 461  ccttcaggagctagaccaacgtattccaatgccttgaccatattgcgagtaattattcgt 520
            || |  ||||| ||||||||||| ||||  |||||||||||  |||| ||||| || |||
Sbjct: 982  ccctgcggagcaagaccaacgtactccagggccttgaccattgtgcgggtaatcatgcgt 923

                                                                        
Query: 521  cccatggtagtcaaccggaaactactcaatgaaaaccgacttgggtccaagggcaagtac 580
            ||||  |  ||||| ||||| |||||||  || || || ||||| |||||||||||||||
Sbjct: 922  cccacagaggtcaaacggaagctactcagggagaatcggcttggatccaagggcaagtac 863

                                                                  
Query: 581  caaggcaatggagaatcttcagcaagnatccttatcccaaataacctcaaaccc 634
            |||||||| ||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 862  caaggcaagggagaatcttcagcaag-atccttatcccaaacaacctcaaaccc 810



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>gb|AY103656.1| Zea mays PCO072714 mRNA sequence
          Length = 1665

 Score =  210 bits (106), Expect = 4e-51
 Identities = 248/294 (84%), Gaps = 1/294 (0%)
 Strand = Plus / Minus

                                                                        
Query: 341  gctcattccgaaagaggcttccgaaccacaaagaagtacatcggggtgaagatttccttc 400
            |||||||||  ||||||||||||||| | |||||||||||| || |||||||| ||||||
Sbjct: 1277 gctcattccagaagaggcttccgaacaagaaagaagtacattggcgtgaagatctccttc 1218

                                                                        
Query: 401  ttgccaccttcgacaagaccttctgcggccttctctaagaaactagagaccctctggctg 460
            || || || || || || |||||||| |||||||| | |||| ||||||||||||  |||
Sbjct: 1217 tttccgccctctaccagcccttctgcagccttctccaggaaattagagaccctctcactg 1158

                                                                        
Query: 461  ccttcaggagctagaccaacgtattccaatgccttgaccatattgcgagtaattattcgt 520
            || |  ||||| ||||||||||| ||||  |||||||||||  |||| ||||| || |||
Sbjct: 1157 ccctgcggagcaagaccaacgtactccagggccttgaccattgtgcgggtaatcatgcgt 1098

                                                                        
Query: 521  cccatggtagtcaaccggaaactactcaatgaaaaccgacttgggtccaagggcaagtac 580
            ||||  |  ||||| ||||| |||||||  || || || ||||| |||||||||||||||
Sbjct: 1097 cccacagaggtcaaacggaagctactcagggagaatcggcttggatccaagggcaagtac 1038

                                                                  
Query: 581  caaggcaatggagaatcttcagcaagnatccttatcccaaataacctcaaaccc 634
            |||||||| ||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 1037 caaggcaagggagaatcttcagcaag-atccttatcccaaacaacctcaaaccc 985



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>gb|U79669.1|ZMU79669 Zea mays endosperm C-24 sterol methyltransferase (ESMT1) mRNA,
            complete cds
          Length = 1383

 Score =  210 bits (106), Expect = 4e-51
 Identities = 248/294 (84%), Gaps = 1/294 (0%)
 Strand = Plus / Minus

                                                                        
Query: 341  gctcattccgaaagaggcttccgaaccacaaagaagtacatcggggtgaagatttccttc 400
            |||||||||  ||||||||||||||| | |||||||||||| || |||||||| ||||||
Sbjct: 1114 gctcattccagaagaggcttccgaacaagaaagaagtacattggcgtgaagatctccttc 1055

                                                                        
Query: 401  ttgccaccttcgacaagaccttctgcggccttctctaagaaactagagaccctctggctg 460
            || || || || || || |||||||| |||||||| | |||| ||||||||||||  |||
Sbjct: 1054 tttccgccctctaccagcccttctgcagccttctccaggaaattagagaccctctcactg 995

                                                                        
Query: 461  ccttcaggagctagaccaacgtattccaatgccttgaccatattgcgagtaattattcgt 520
            || |  ||||| ||||||||||| ||||  |||||||||||  |||| ||||| || |||
Sbjct: 994  ccctgcggagcaagaccaacgtactccagggccttgaccattgtgcgggtaatcatgcgt 935

                                                                        
Query: 521  cccatggtagtcaaccggaaactactcaatgaaaaccgacttgggtccaagggcaagtac 580
            ||||  |  ||||| ||||| |||||||  || || || ||||| |||||||||||||||
Sbjct: 934  cccacagaggtcaaacggaagctactcagggagaatcggcttggatccaagggcaagtac 875

                                                                  
Query: 581  caaggcaatggagaatcttcagcaagnatccttatcccaaataacctcaaaccc 634
            |||||||| ||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 874  caaggcaagggagaatcttcagcaag-atccttatcccaaacaacctcaaaccc 822



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>gb|BT018799.1| Zea mays clone EL01N0528H08.d mRNA sequence
          Length = 1589

 Score =  194 bits (98), Expect = 2e-46
 Identities = 246/294 (83%), Gaps = 1/294 (0%)
 Strand = Plus / Minus

                                                                        
Query: 341  gctcattccgaaagaggcttccgaaccacaaagaagtacatcggggtgaagatttccttc 400
            |||||||||  ||||||||||||||| | |||||||||||| || |||||||| ||||||
Sbjct: 1222 gctcattccagaagaggcttccgaacaagaaagaagtacattggcgtgaagatctccttc 1163

                                                                        
Query: 401  ttgccaccttcgacaagaccttctgcggccttctctaagaaactagagaccctctggctg 460
            || || || || || || |||||||| |||||||| | |||| ||||||||||||  |||
Sbjct: 1162 tttccgccctctaccagcccttctgcagccttctccaggaaattagagaccctctcactg 1103

                                                                        
Query: 461  ccttcaggagctagaccaacgtattccaatgccttgaccatattgcgagtaattattcgt 520
            || |  ||||| ||||||||||| ||||  |||||||||||  |||| ||||| || |||
Sbjct: 1102 ccctgcggagcaagaccaacgtactccagggccttgaccattgtgcgggtaatcatgcgt 1043

                                                                        
Query: 521  cccatggtagtcaaccggaaactactcaatgaaaaccgacttgggtccaagggcaagtac 580
            ||||  |  ||||| ||||| |||||||  || || || ||||| |||||||||||||||
Sbjct: 1042 cccacagaggtcaaacggaagctactcagggagaatcggcttggatccaagggcaagtac 983

                                                                  
Query: 581  caaggcaatggagaatcttcagcaagnatccttatcccaaataacctcaaaccc 634
            |||||||| ||||||||||||||||| ||||||||  |||| ||||||||||||
Sbjct: 982  caaggcaagggagaatcttcagcaag-atccttatagcaaacaacctcaaaccc 930



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>gb|AF042332.1|AF042332 Oryza sativa subsp. japonica cycloartenol-C24-methyltransferase mRNA,
            complete cds
          Length = 1629

 Score =  129 bits (65), Expect = 1e-26
 Identities = 137/160 (85%), Gaps = 1/160 (0%)
 Strand = Plus / Minus

                                                                        
Query: 481  gtattccaatgccttgaccatattgcgagtaattattcgtcccatggtagtcaaccggaa 540
            ||||||||||||||| |||||  |||||||||||   || ||||  |||||||  |||||
Sbjct: 1074 gtattccaatgccttcaccattgtgcgagtaattgcacgccccacagtagtcagacggaa 1015

                                                                        
Query: 541  actactcaatgaaaaccgacttgggtccaagggcaagtaccaaggcaatggagaatcttc 600
             |||||||| |||||||| ||||| |||||||||| ||||||||| |  || ||||||||
Sbjct: 1014 gctactcaaggaaaaccggcttggatccaagggcaggtaccaaggaaccggggaatcttc 955

                                                    
Query: 601  agcaagnatccttatcccaaataacctcaaacccagcatc 640
            ||||||  || |||||||||||||||||||||||||||||
Sbjct: 954  agcaagg-tctttatcccaaataacctcaaacccagcatc 916



 Score =  127 bits (64), Expect = 5e-26
 Identities = 133/156 (85%)
 Strand = Plus / Minus

                                                                        
Query: 341  gctcattccgaaagaggcttccgaaccacaaagaagtacatcggggtgaagatttccttc 400
            |||||||| || | |||||| ||||||| ||||||||||||||| |||||||||||||||
Sbjct: 1229 gctcattctgagataggcttgcgaaccaaaaagaagtacatcggcgtgaagatttccttc 1170

                                                                        
Query: 401  ttgccaccttcgacaagaccttctgcggccttctctaagaaactagagaccctctggctg 460
            |||||||||||||| |||||||| || ||||||||||| ||  |||| ||||| |  || 
Sbjct: 1169 ttgccaccttcgacgagaccttcagctgccttctctaaaaagttagataccctttcactt 1110

                                                
Query: 461  ccttcaggagctagaccaacgtattccaatgccttg 496
            ||||  || || || || ||||||||||||||||||
Sbjct: 1109 ccttgtggggcaaggccgacgtattccaatgccttg 1074



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 87/101 (86%), Gaps = 1/101 (0%)
 Strand = Plus / Plus

                                                                           
Query: 527     gtagtcaaccggaaactactcaatgaaaaccgacttgggtccaagggcaagtaccaaggc 586
               |||||||  ||||| |||||||| |||||||| ||||| |||||||||| ||||||||| 
Sbjct: 5784578 gtagtcagacggaagctactcaaggaaaaccggcttggatccaagggcaggtaccaagga 5784637

                                                        
Query: 587     aatggagaatcttcagcaagnatccttatcccaaataacct 627
               |  || ||||||||||||||  || ||||||||||||||||
Sbjct: 5784638 accggggaatcttcagcaagg-tctttatcccaaataacct 5784677



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                           
Query: 341     gctcattccgaaagaggcttccgaaccacaaagaagtacatcggggtgaagatttccttc 400
               |||||||| || | |||||| ||||||| ||||||||||||||| |||||||||||||||
Sbjct: 5783524 gctcattctgagataggcttgcgaaccaaaaagaagtacatcggcgtgaagatttccttc 5783583



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                           
Query: 400     cttgccaccttcgacaagaccttctgcggccttctctaagaaactagagaccctctggct 459
               ||||||||||||||| |||||||| || ||||||||||| ||  |||| ||||| |  ||
Sbjct: 5783738 cttgccaccttcgacgagaccttcagctgccttctctaaaaagttagataccctttcact 5783797

                                                   
Query: 460     gccttcaggagctagaccaacgtattccaatgcctt 495
                ||||  || || || || |||||||||||||||||
Sbjct: 5783798 tccttgtggggcaaggccgacgtattccaatgcctt 5783833



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>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1119_B04
          Length = 151721

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 87/101 (86%), Gaps = 1/101 (0%)
 Strand = Plus / Plus

                                                                         
Query: 527   gtagtcaaccggaaactactcaatgaaaaccgacttgggtccaagggcaagtaccaaggc 586
             |||||||  ||||| |||||||| |||||||| ||||| |||||||||| ||||||||| 
Sbjct: 91606 gtagtcagacggaagctactcaaggaaaaccggcttggatccaagggcaggtaccaagga 91665

                                                      
Query: 587   aatggagaatcttcagcaagnatccttatcccaaataacct 627
             |  || ||||||||||||||  || ||||||||||||||||
Sbjct: 91666 accggggaatcttcagcaagg-tctttatcccaaataacct 91705



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                         
Query: 341   gctcattccgaaagaggcttccgaaccacaaagaagtacatcggggtgaagatttccttc 400
             |||||||| || | |||||| ||||||| ||||||||||||||| |||||||||||||||
Sbjct: 90552 gctcattctgagataggcttgcgaaccaaaaagaagtacatcggcgtgaagatttccttc 90611



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                         
Query: 400   cttgccaccttcgacaagaccttctgcggccttctctaagaaactagagaccctctggct 459
             ||||||||||||||| |||||||| || ||||||||||| ||  |||| ||||| |  ||
Sbjct: 90766 cttgccaccttcgacgagaccttcagctgccttctctaaaaagttagataccctttcact 90825

                                                 
Query: 460   gccttcaggagctagaccaacgtattccaatgcctt 495
              ||||  || || || || |||||||||||||||||
Sbjct: 90826 tccttgtggggcaaggccgacgtattccaatgcctt 90861



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>gb|U81312.1|NTU81312 Nicotiana tabacum S-adenosyl-methionine-sterol-C-methyltransferase
            mRNA, complete cds
          Length = 1444

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                        
Query: 356  ggcttccgaaccacaaagaagtacatcggggtgaagatttccttcttgccaccttcgaca 415
            ||||| |||||||| ||||||||||| || ||||| ||  | |||||| ||||  |||||
Sbjct: 1133 ggcttgcgaaccacgaagaagtacattggtgtgaaaatccctttcttggcaccaccgaca 1074

                                       
Query: 416  agaccttctgcggccttctctaagaaa 442
            ||||||||||| || ||||||||||||
Sbjct: 1073 agaccttctgcagctttctctaagaaa 1047



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>gb|BT013908.1| Lycopersicon esculentum clone 132905F, mRNA sequence
          Length = 1437

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                        
Query: 356  ggcttccgaaccacaaagaagtacatcggggtgaagatttccttcttgccaccttcgaca 415
            ||||| |||||||  ||||| |||||||| ||||||||  | |||||| ||||  | |||
Sbjct: 1122 ggcttgcgaaccaagaagaaatacatcggtgtgaagatccctttcttggcaccaccaaca 1063

                                       
Query: 416  agaccttctgcggccttctctaagaaa 442
            |||||||||||||| || |||||||||
Sbjct: 1062 agaccttctgcggctttttctaagaaa 1036



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>gb|CP000114.1| Streptococcus agalactiae A909, complete genome
          Length = 2127839

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 112     tagcttatttatgccactaatagctt 137
               ||||||||||||| ||||||||||||
Sbjct: 1737195 tagcttatttatgtcactaatagctt 1737170



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>gb|AE014270.1| Streptococcus agalactiae 2603V/R section 80 of 100 of the complete
             genome
          Length = 25914

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 112   tagcttatttatgccactaatagctt 137
             ||||||||||||| ||||||||||||
Sbjct: 19776 tagcttatttatgtcactaatagctt 19751



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>emb|AL766853.1|SAG766853 Streptococcus agalactiae NEM316 complete genome, segment 11
          Length = 122050

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 112   tagcttatttatgccactaatagctt 137
             ||||||||||||| ||||||||||||
Sbjct: 45539 tagcttatttatgtcactaatagctt 45514



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>gb|AC026403.4| Homo sapiens chromosome 5 clone CTB-63M22, complete sequence
          Length = 138536

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 402   tgccaccttcgacaagaccttc 423
             ||||||||||||||||||||||
Sbjct: 78428 tgccaccttcgacaagaccttc 78449



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>gb|AC167812.4| Mus musculus BAC clone RP24-299F5 from chromosome 18, complete sequence
          Length = 193523

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 451   cctctggctgccttcaggagctaga 475
             |||||||||||||||||||| ||||
Sbjct: 14603 cctctggctgccttcaggagataga 14579



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>emb|AL355475.7| Human DNA sequence from clone RP1-241M7 on chromosome 1q43-44, complete
             sequence
          Length = 84707

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 121   tatgccactaatagcttaccacaat 145
             ||||||||| |||||||||||||||
Sbjct: 65799 tatgccactcatagcttaccacaat 65823



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>emb|AL162417.23| Human DNA sequence from clone RP11-326L24 on chromosome 9q34.13-34.3
              Contains the GTF3C5 gene for general transcription factor
              IIIC polypeptide 5 63kDa, the CEL gene for carboxyl ester
              lipase (bile salt-stimulated lipase), the CELP gene for
              carboxyl ester lipase pseudogene, the RALGDS gene for ral
              guanine nucleotide dissociation stimulator, the gene for
              Forssman glycolipid synthetase (FS), three novel genes and
              six CpG islands, complete sequence
          Length = 152863

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 452    ctctggctgccttcaggagct 472
              |||||||||||||||||||||
Sbjct: 112416 ctctggctgccttcaggagct 112436



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>dbj|AK079117.1| Mus musculus 12 days embryo embryonic body between diaphragm region
            and neck cDNA, RIKEN full-length enriched library,
            clone:9430017A01 product:unclassifiable, full insert
            sequence
          Length = 4610

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 451  cctctggctgccttcaggagctaga 475
            |||||||||||||||||||| ||||
Sbjct: 1298 cctctggctgccttcaggagataga 1322



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>gb|AC114924.5| Mus musculus BAC clone RP23-424D3 from 18, complete sequence
          Length = 198440

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 451   cctctggctgccttcaggagctaga 475
             |||||||||||||||||||| ||||
Sbjct: 46560 cctctggctgccttcaggagataga 46584



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>gb|AC001643.1|AC001643 Genomic sequence from Human 9q34, complete sequence
          Length = 40203

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 452   ctctggctgccttcaggagct 472
             |||||||||||||||||||||
Sbjct: 13291 ctctggctgccttcaggagct 13311



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>gb|AE009148.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 174
            of 256 of the complete sequence
          Length = 10938

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 397  cttcttgccaccttcgacaa 416
            ||||||||||||||||||||
Sbjct: 9944 cttcttgccaccttcgacaa 9963



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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 380     atcggggtgaagatttccttcttg 403
               ||||||||||||| ||||||||||
Sbjct: 1617744 atcggggtgaagaattccttcttg 1617721



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>ref|XM_846462.1| PREDICTED: Canis familiaris similar to spectrin domain with
            coiled-coils 1, transcript variant 2 (LOC489524), mRNA
          Length = 3207

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 445  agagaccctctggctgcctt 464
            ||||||||||||||||||||
Sbjct: 2848 agagaccctctggctgcctt 2867



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>ref|XM_546643.2| PREDICTED: Canis familiaris similar to spectrin domain with
            coiled-coils 1, transcript variant 1 (LOC489524), mRNA
          Length = 3180

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 445  agagaccctctggctgcctt 464
            ||||||||||||||||||||
Sbjct: 2821 agagaccctctggctgcctt 2840



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>ref|XM_858856.1| PREDICTED: Canis familiaris similar to spectrin domain with
            coiled-coils 1, transcript variant 3 (LOC489524), mRNA
          Length = 3207

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 445  agagaccctctggctgcctt 464
            ||||||||||||||||||||
Sbjct: 2848 agagaccctctggctgcctt 2867



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>emb|BX936358.10| Zebrafish DNA sequence from clone CH211-159A10 in linkage group 3,
              complete sequence
          Length = 165674

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 313    aaaatgcatctttgcctgaa 332
              ||||||||||||||||||||
Sbjct: 144064 aaaatgcatctttgcctgaa 144083



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>gb|AC149594.2| Xenopus tropicalis chromosome CH216-62P2, complete sequence
          Length = 167602

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 442   actagagaccctctggctgc 461
             ||||||||||||||||||||
Sbjct: 10682 actagagaccctctggctgc 10701



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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 397     cttcttgccaccttcgacaa 416
               ||||||||||||||||||||
Sbjct: 1930298 cttcttgccaccttcgacaa 1930317



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 37       atcgtacacacacttgtttg 56
                ||||||||||||||||||||
Sbjct: 10849235 atcgtacacacacttgtttg 10849216



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>dbj|AP003140.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0025P13
          Length = 133242

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    atcgtacacacacttgtttg 56
             ||||||||||||||||||||
Sbjct: 36251 atcgtacacacacttgtttg 36232



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>emb|CR847509.9| Zebrafish DNA sequence from clone DKEY-29B22 in linkage group 3, complete
              sequence
          Length = 157983

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    aaaatgcatctttgcctgaa 332
              ||||||||||||||||||||
Sbjct: 108152 aaaatgcatctttgcctgaa 108133


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,319,937
Number of Sequences: 3902068
Number of extensions: 4319937
Number of successful extensions: 70496
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70359
Number of HSP's gapped (non-prelim): 121
length of query: 640
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 617
effective length of database: 17,143,297,704
effective search space: 10577414683368
effective search space used: 10577414683368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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