| Clone Name | rbags7m19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009017.1| Triticum aestivum clone wdk3c.pk006.l8:fis, full insert mRNA sequence Length = 984 Score = 712 bits (359), Expect = 0.0 Identities = 428/451 (94%) Strand = Plus / Minus Query: 194 gcgctttcgaccatcccatgtggcatgcttggtacaccgtccataccgatgtctatcagg 253 ||||||||||||||||||||| ||| |||| | ||| ||| ||| |||| |||| | Sbjct: 720 gcgctttcgaccatcccatgttgcaggcttcttcaaccctccgtactgatggctattggt 661 Query: 254 ttactgtttacttctgcgactccagagccttcaggacttcctctcccattcgcttgcatc 313 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 660 ttgatgtttacttctgcgactccagagccttcaggacttcctctcccattcgcttgcatc 601 Query: 314 caaccaatgtcgttccaggagaatatatgtccccagttcggaacccattgtccagtgtct 373 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 600 caaccaatgtcgtcccaggagaatatatgtccccagttcggaacccattgtccagtgtct 541 Query: 374 ctgtaaccgcaacttcgattctctttgcagcactttctacgccaaggccatatttcaata 433 |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 540 ctgtaaccgcggcttcgattctctttgcagcactttctacaccaaggccatatttcaata 481 Query: 434 gcattgccgcactaagaattgtagctaatgggtttgccttgtcctggccagcaatgtcag 493 |||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 480 gcatcgcagcactaagaattgtagctaacgggtttgccttgtcctggccagcaatgtcag 421 Query: 494 gagcagagccatgaatgggttcaaaaagacccggtcccgattcgccaacactggcagatg 553 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 420 gagcagagccatgaatgggttcaaaaagacccggtcccgattcaccaacactggcagatg 361 Query: 554 gcagcattccaatgcttcctgtgatcattgatgcttcgtccgataatatgtcaccaaaaa 613 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 gcagcattccaatgcttcctgtgatcattgatgcttcgtccgataatatgtcaccaaaaa 301 Query: 614 tattgtttgtcacaatcgtgtcaaactgttt 644 ||||||||||||||||||||||||||||||| Sbjct: 300 tattgtttgtcacaatcgtgtcaaactgttt 270 Score = 81.8 bits (41), Expect = 3e-12 Identities = 150/182 (82%), Gaps = 17/182 (9%) Strand = Plus / Minus Query: 1 ggtgcaaagggaat-atccccatttttctatcct----ggacacaattcattcaatcgag 55 ||||||||||||| |||||||||||||||||| ||||||||||||||||||| || Sbjct: 938 ggtgcaaagggaaccatccccatttttctatccatcacggacacaattcattcaatcaag 879 Query: 56 gcacacgaaaatcattccgacgagcaatggaaagggaaaaggcgactcatccgctaaaat 115 |||||| ||||| |||| ||| | ||||||||||| ||| ||||||||| | Sbjct: 878 gcacacacaaatctttccaacgcg------aaagggaaaagacga----tccgctaaa-t 830 Query: 116 tcctgcactgaactacaagggcggaagcagacaaaca-gaaacaaaatcacgcaatccag 174 |||||||| |||||||||||||||||||| |||||| ||| |||||||| |||||||| Sbjct: 829 tcctgcacccaactacaagggcggaagcaggcaaacataaaaaaaaatcacacaatccag 770 Query: 175 gg 176 || Sbjct: 769 gg 768
>ref|XM_469071.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1712 Score = 436 bits (220), Expect = e-119 Identities = 337/376 (89%) Strand = Plus / Minus Query: 266 tctgcgactccagagccttcaggacttcctctcccattcgcttgcatccaaccaatgtcg 325 |||||||||| | || ||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 1367 tctgcgactctacagtcttcaggacttcctctcccattcgcttgcatccgaccaaggtcg 1308 Query: 326 ttccaggagaatatatgtccccagttcggaacccattgtccagtgtctctgtaaccgcaa 385 |||||||||||||||||||||||||||||||||| |||| |||||||||||||| || Sbjct: 1307 ttccaggagaatatatgtccccagttcggaacccgttgtttagtgtctctgtaactgcgg 1248 Query: 386 cttcgattctctttgcagcactttctacgccaaggccatatttcaatagcattgccgcac 445 |||| | ||||||||||||| ||||| | ||||||||||| ||||||||| || |||| Sbjct: 1247 cttcaactctctttgcagcattttcttctccaaggccataccgcaatagcatggcagcac 1188 Query: 446 taagaattgtagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccat 505 |||||||||||||||||||||||||||| ||||| ||||||||||| || ||||| |||| Sbjct: 1187 taagaattgtagctaatgggtttgccttatcctgcccagcaatgtcgggcgcagaaccat 1128 Query: 506 gaatgggttcaaaaagacccggtcccgattcgccaacactggcagatggcagcattccaa 565 |||| || ||||||||||| ||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1127 gaataggctcaaaaagacctggtcccgattcaccaacactggcagatgggagcattccaa 1068 Query: 566 tgcttcctgtgatcattgatgcttcgtccgataatatgtcaccaaaaatattgtttgtca 625 ||||||| || | |||||||||||| || || |||||||||||||||||||||||||| | Sbjct: 1067 tgcttccagtaagcattgatgcttcatcagacaatatgtcaccaaaaatattgtttgtga 1008 Query: 626 caatcgtgtcaaactg 641 |||| ||||||||||| Sbjct: 1007 caattgtgtcaaactg 992
>dbj|AK066745.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084N20, full insert sequence Length = 839 Score = 436 bits (220), Expect = e-119 Identities = 337/376 (89%) Strand = Plus / Minus Query: 266 tctgcgactccagagccttcaggacttcctctcccattcgcttgcatccaaccaatgtcg 325 |||||||||| | || ||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 577 tctgcgactctacagtcttcaggacttcctctcccattcgcttgcatccgaccaaggtcg 518 Query: 326 ttccaggagaatatatgtccccagttcggaacccattgtccagtgtctctgtaaccgcaa 385 |||||||||||||||||||||||||||||||||| |||| |||||||||||||| || Sbjct: 517 ttccaggagaatatatgtccccagttcggaacccgttgtttagtgtctctgtaactgcgg 458 Query: 386 cttcgattctctttgcagcactttctacgccaaggccatatttcaatagcattgccgcac 445 |||| | ||||||||||||| ||||| | ||||||||||| ||||||||| || |||| Sbjct: 457 cttcaactctctttgcagcattttcttctccaaggccataccgcaatagcatggcagcac 398 Query: 446 taagaattgtagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccat 505 |||||||||||||||||||||||||||| ||||| ||||||||||| || ||||| |||| Sbjct: 397 taagaattgtagctaatgggtttgccttatcctgcccagcaatgtcgggcgcagaaccat 338 Query: 506 gaatgggttcaaaaagacccggtcccgattcgccaacactggcagatggcagcattccaa 565 |||| || ||||||||||| ||||||||||| ||||||||||||||||| |||||||||| Sbjct: 337 gaataggctcaaaaagacctggtcccgattcaccaacactggcagatgggagcattccaa 278 Query: 566 tgcttcctgtgatcattgatgcttcgtccgataatatgtcaccaaaaatattgtttgtca 625 ||||||| || | |||||||||||| || || |||||||||||||||||||||||||| | Sbjct: 277 tgcttccagtaagcattgatgcttcatcagacaatatgtcaccaaaaatattgtttgtga 218 Query: 626 caatcgtgtcaaactg 641 |||| ||||||||||| Sbjct: 217 caattgtgtcaaactg 202
>dbj|AK120254.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045L02, full insert sequence Length = 1540 Score = 420 bits (212), Expect = e-114 Identities = 336/376 (89%), Gaps = 1/376 (0%) Strand = Plus / Minus Query: 266 tctgcgactccagagccttcaggacttcctctcccattcgcttgcatccaaccaatgtcg 325 |||||||||| | || ||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 1199 tctgcgactctacagtcttcaggacttcctctcccattcgcttgcatccgaccaaggtcg 1140 Query: 326 ttccaggagaatatatgtccccagttcggaacccattgtccagtgtctctgtaaccgcaa 385 |||||||||||||||||||||||||||||||||| |||| |||||||||||||| || Sbjct: 1139 ttccaggagaatatatgtccccagttcggaacccgttgtttagtgtctctgtaactgcgg 1080 Query: 386 cttcgattctctttgcagcactttctacgccaaggccatatttcaatagcattgccgcac 445 |||| | |||||||||||| ||||| | ||||||||||| ||||||||| || |||| Sbjct: 1079 cttcaac-ctctttgcagcattttcttctccaaggccataccgcaatagcatggcagcac 1021 Query: 446 taagaattgtagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccat 505 |||||||||||||||||||||||||||| ||||| ||||||||||| || ||||| |||| Sbjct: 1020 taagaattgtagctaatgggtttgccttatcctgcccagcaatgtcgggcgcagaaccat 961 Query: 506 gaatgggttcaaaaagacccggtcccgattcgccaacactggcagatggcagcattccaa 565 |||| || ||||||||||| ||||||||||| ||||||||||||||||| |||||||||| Sbjct: 960 gaataggctcaaaaagacctggtcccgattcaccaacactggcagatgggagcattccaa 901 Query: 566 tgcttcctgtgatcattgatgcttcgtccgataatatgtcaccaaaaatattgtttgtca 625 ||||||| || | |||||||||||| || || |||||||||||||||||||||||||| | Sbjct: 900 tgcttccagtaagcattgatgcttcatcagacaatatgtcaccaaaaatattgtttgtga 841 Query: 626 caatcgtgtcaaactg 641 |||| ||||||||||| Sbjct: 840 caattgtgtcaaactg 825
>gb|BT017009.1| Zea mays clone EK07D2310G02.c mRNA sequence Length = 1036 Score = 396 bits (200), Expect = e-107 Identities = 320/360 (88%) Strand = Plus / Minus Query: 282 cttcaggacttcctctcccattcgcttgcatccaaccaatgtcgttccaggagaatatat 341 ||||| ||||||||| ||||| |||||||||||||||| ||| ||||||||||||||||| Sbjct: 750 cttcaagacttcctcccccatccgcttgcatccaaccagtgttgttccaggagaatatat 691 Query: 342 gtccccagttcggaacccattgtccagtgtctctgtaaccgcaacttcgattctctttgc 401 |||||||||||||||||||| || |||||| |||||||| ||| |||| |||||| | || Sbjct: 690 gtccccagttcggaacccatggttcagtgtttctgtaactgcagcttcaattctcctcgc 631 Query: 402 agcactttctacgccaaggccatatttcaatagcattgccgcactaagaattgtagctaa 461 |||| ||||| | || ||||||||| ||||||||| || || ||||||||||||||||| Sbjct: 630 agcattttcttctcctaggccatatcgcaatagcatcgctgcgctaagaattgtagctaa 571 Query: 462 tgggtttgccttgtcctggccagcaatgtcaggagcagagccatgaatgggttcaaaaag 521 ||| || ||||||||||| |||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 570 tggattggccttgtcctgtccagcaatatcaggggcagagccatgaataggttcaaaaag 511 Query: 522 acccggtcccgattcgccaacactggcagatggcagcattccaatgcttcctgtgatcat 581 ||| ||||||||||| || ||||| |||||||| ||||||||||||||||| || ||||| Sbjct: 510 accaggtcccgattcaccgacactcgcagatggaagcattccaatgcttcccgtaatcat 451 Query: 582 tgatgcttcgtccgataatatgtcaccaaaaatattgtttgtcacaatcgtgtcaaactg 641 ||||||||| || ||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 450 tgatgcttcatcagataatatgtcaccaaaaatattgtttgtgacaattgtatcaaactg 391
>gb|AY108697.1| Zea mays PCO126508 mRNA sequence Length = 1558 Score = 396 bits (200), Expect = e-107 Identities = 320/360 (88%) Strand = Plus / Minus Query: 282 cttcaggacttcctctcccattcgcttgcatccaaccaatgtcgttccaggagaatatat 341 ||||| ||||||||| ||||| |||||||||||||||| ||| ||||||||||||||||| Sbjct: 1265 cttcaagacttcctcccccatccgcttgcatccaaccagtgttgttccaggagaatatat 1206 Query: 342 gtccccagttcggaacccattgtccagtgtctctgtaaccgcaacttcgattctctttgc 401 |||||||||||||||||||| || |||||| |||||||| ||| |||| |||||| | || Sbjct: 1205 gtccccagttcggaacccatggttcagtgtttctgtaactgcagcttcaattctcctcgc 1146 Query: 402 agcactttctacgccaaggccatatttcaatagcattgccgcactaagaattgtagctaa 461 |||| ||||| | || ||||||||| ||||||||| || || ||||||||||||||||| Sbjct: 1145 agcattttcttctcctaggccatatcgcaatagcatcgctgcgctaagaattgtagctaa 1086 Query: 462 tgggtttgccttgtcctggccagcaatgtcaggagcagagccatgaatgggttcaaaaag 521 ||| || ||||||||||| |||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 1085 tggattggccttgtcctgtccagcaatatcaggggcagagccatgaataggttcaaaaag 1026 Query: 522 acccggtcccgattcgccaacactggcagatggcagcattccaatgcttcctgtgatcat 581 ||| ||||||||||| || ||||| |||||||| ||||||||||||||||| || ||||| Sbjct: 1025 accaggtcccgattcaccgacactcgcagatggaagcattccaatgcttcccgtaatcat 966 Query: 582 tgatgcttcgtccgataatatgtcaccaaaaatattgtttgtcacaatcgtgtcaaactg 641 ||||||||| || ||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 965 tgatgcttcatcagataatatgtcaccaaaaatattgtttgtgacaattgtatcaaactg 906
>gb|BT016862.1| Zea mays clone Contig695 mRNA sequence Length = 1573 Score = 389 bits (196), Expect = e-105 Identities = 319/360 (88%) Strand = Plus / Plus Query: 282 cttcaggacttcctctcccattcgcttgcatccaaccaatgtcgttccaggagaatatat 341 |||||||||||| || ||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 344 cttcaggacttcttcccccatccgcttgcatccaaccaatgttgttccaggagaatatat 403 Query: 342 gtccccagttcggaacccattgtccagtgtctctgtaaccgcaacttcgattctctttgc 401 |||||||||||||||||||| || |||||| || ||||| ||| |||| ||||| || || Sbjct: 404 gtccccagttcggaacccatggttcagtgtttcagtaactgcagcttcaattctgttcgc 463 Query: 402 agcactttctacgccaaggccatatttcaatagcattgccgcactaagaattgtagctaa 461 |||| ||||| | || ||||||||| |||||||||| || ||||||||||||||||| || Sbjct: 464 agcattttcttctcctaggccatatctcaatagcatcgctgcactaagaattgtagccaa 523 Query: 462 tgggtttgccttgtcctggccagcaatgtcaggagcagagccatgaatgggttcaaaaag 521 ||| | |||||||||| |||||||| ||||| ||||| |||||||| || |||||||| Sbjct: 524 tggactgcccttgtcctgtccagcaatatcaggggcagacccatgaataggctcaaaaag 583 Query: 522 acccggtcccgattcgccaacactggcagatggcagcattccaatgcttcctgtgatcat 581 ||| ||||||||||| ||||||||||||||||| ||||||||||| ||||| || ||||| Sbjct: 584 accaggtcccgattcaccaacactggcagatgggagcattccaatacttcccgtaatcat 643 Query: 582 tgatgcttcgtccgataatatgtcaccaaaaatattgtttgtcacaatcgtgtcaaactg 641 ||||||||| || ||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 644 tgatgcttcatcagataatatgtcaccaaaaatattgtttgtgacaattgtgtcaaactg 703
>gb|AY112331.1| Zea mays CL362_2 mRNA sequence Length = 604 Score = 317 bits (160), Expect = 3e-83 Identities = 266/303 (87%) Strand = Plus / Minus Query: 304 cgcttgcatccaaccaatgtcgttccaggagaatatatgtccccagttcggaacccattg 363 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 303 cgcttgcatccaaccaatgttgttccaggagaatatatgtccccagttcggaacccatgg 244 Query: 364 tccagtgtctctgtaaccgcaacttcgattctctttgcagcactttctacgccaaggcca 423 | |||||| || ||||| ||| |||| ||||| || |||||| ||||| | || |||||| Sbjct: 243 ttcagtgtttcagtaactgcagcttcaattctgttcgcagcattttcttctcctaggcca 184 Query: 424 tatttcaatagcattgccgcactaagaattgtagctaatgggtttgccttgtcctggcca 483 ||| |||||||||| || ||||||||||||||||| ||||| || ||||||||||| ||| Sbjct: 183 tatctcaatagcatcgctgcactaagaattgtagccaatggattggccttgtcctgtcca 124 Query: 484 gcaatgtcaggagcagagccatgaatgggttcaaaaagacccggtcccgattcgccaaca 543 ||||| ||||| |||||||||||||| ||||| |||| ||||||||||| |||||| Sbjct: 123 gcaatatcaggggcagagccatgaataggttcnnnnngaccaggtcccgattcaccaaca 64 Query: 544 ctggcagatggcagcattccaatgcttcctgtgatcattgatgcttcgtccgataatatg 603 ||||||||||| ||||||||||| ||||| || |||||||||||||| || ||||||||| Sbjct: 63 ctggcagatgggagcattccaatacttcccgtaatcattgatgcttcatcagataatatg 4 Query: 604 tca 606 ||| Sbjct: 3 tca 1
>ref|NM_106704.2| Arabidopsis thaliana 3-isopropylmalate dehydrogenase/ oxidoreductase AT1G80560 mRNA, complete cds Length = 1432 Score = 180 bits (91), Expect = 4e-42 Identities = 217/259 (83%) Strand = Plus / Minus Query: 386 cttcgattctctttgcagcactttctacgccaaggccatatttcaatagcattgccgcac 445 |||| |||||||| || || ||||| | ||||| || ||||||| |||||||| || | Sbjct: 1124 cttcaattctcttggctgccttttcttctccaagtccgtatttcagaagcattgcagcgc 1065 Query: 446 taagaattgtagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccat 505 | ||||| || || |||||||||||||| ||||| |||||||| ||||| ||||| |||| Sbjct: 1064 ttagaatggttgccaatgggtttgccttatcctgtccagcaatatcaggtgcagaaccat 1005 Query: 506 gaatgggttcaaaaagacccggtcccgattcgccaacactggcagatggcagcattccaa 565 | || |||||||| || || |||||||| || | | ||| ||||||||||||||||| | Sbjct: 1004 gtataggttcaaagagtccaggtcccgaatcactgagactagcagatggcagcattccta 945 Query: 566 tgcttcctgtgatcattgatgcttcgtccgataatatgtcaccaaaaatattgtttgtca 625 ||||||||||||||||||| ||||| || |||||||| ||||||||||| |||||||| | Sbjct: 944 tgcttcctgtgatcattgaagcttcatcggataatatatcaccaaaaatgttgtttgtga 885 Query: 626 caatcgtgtcaaactgttt 644 | || |||||||||||||| Sbjct: 884 cgatggtgtcaaactgttt 866
>emb|Y10216.1|ATIMDH A.thaliana mRNA for hypothetical 3-isopropylmalate dehydrogenase Length = 1457 Score = 180 bits (91), Expect = 4e-42 Identities = 217/259 (83%) Strand = Plus / Minus Query: 386 cttcgattctctttgcagcactttctacgccaaggccatatttcaatagcattgccgcac 445 |||| |||||||| || || ||||| | ||||| || ||||||| |||||||| || | Sbjct: 1124 cttcaattctcttggctgccttttcttctccaagtccgtatttcagaagcattgcagcgc 1065 Query: 446 taagaattgtagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccat 505 | ||||| || || |||||||||||||| ||||| |||||||| ||||| ||||| |||| Sbjct: 1064 ttagaatggttgccaatgggtttgccttatcctgtccagcaatatcaggtgcagaaccat 1005 Query: 506 gaatgggttcaaaaagacccggtcccgattcgccaacactggcagatggcagcattccaa 565 | || |||||||| || || |||||||| || | | ||| ||||||||||||||||| | Sbjct: 1004 gtataggttcaaagagtccaggtcccgaatcactgagactagcagatggcagcattccta 945 Query: 566 tgcttcctgtgatcattgatgcttcgtccgataatatgtcaccaaaaatattgtttgtca 625 ||||||||||||||||||| ||||| || |||||||| ||||||||||| |||||||| | Sbjct: 944 tgcttcctgtgatcattgaagcttcatcggataatatatcaccaaaaatgttgtttgtga 885 Query: 626 caatcgtgtcaaactgttt 644 | || |||||||||||||| Sbjct: 884 cgatggtgtcaaactgttt 866
>gb|AY114627.1| Arabidopsis thaliana putative 3-isopropylmalate dehydrogenase (At1g80560) mRNA, complete cds Length = 1356 Score = 180 bits (91), Expect = 4e-42 Identities = 217/259 (83%) Strand = Plus / Minus Query: 386 cttcgattctctttgcagcactttctacgccaaggccatatttcaatagcattgccgcac 445 |||| |||||||| || || ||||| | ||||| || ||||||| |||||||| || | Sbjct: 1081 cttcaattctcttggctgccttttcttctccaagtccgtatttcagaagcattgcagcgc 1022 Query: 446 taagaattgtagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccat 505 | ||||| || || |||||||||||||| ||||| |||||||| ||||| ||||| |||| Sbjct: 1021 ttagaatggttgccaatgggtttgccttatcctgtccagcaatatcaggtgcagaaccat 962 Query: 506 gaatgggttcaaaaagacccggtcccgattcgccaacactggcagatggcagcattccaa 565 | || |||||||| || || |||||||| || | | ||| ||||||||||||||||| | Sbjct: 961 gtataggttcaaagagtccaggtcccgaatcactgagactagcagatggcagcattccta 902 Query: 566 tgcttcctgtgatcattgatgcttcgtccgataatatgtcaccaaaaatattgtttgtca 625 ||||||||||||||||||| ||||| || |||||||| ||||||||||| |||||||| | Sbjct: 901 tgcttcctgtgatcattgaagcttcatcggataatatatcaccaaaaatgttgtttgtga 842 Query: 626 caatcgtgtcaaactgttt 644 | || |||||||||||||| Sbjct: 841 cgatggtgtcaaactgttt 823
>gb|AY062441.1| Arabidopsis thaliana putative 3-isopropylmalate dehydrogenase (At1g80560; T21F11.11) mRNA, complete cds Length = 1406 Score = 180 bits (91), Expect = 4e-42 Identities = 217/259 (83%) Strand = Plus / Minus Query: 386 cttcgattctctttgcagcactttctacgccaaggccatatttcaatagcattgccgcac 445 |||| |||||||| || || ||||| | ||||| || ||||||| |||||||| || | Sbjct: 1102 cttcaattctcttggctgccttttcttctccaagtccgtatttcagaagcattgcagcgc 1043 Query: 446 taagaattgtagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccat 505 | ||||| || || |||||||||||||| ||||| |||||||| ||||| ||||| |||| Sbjct: 1042 ttagaatggttgccaatgggtttgccttatcctgtccagcaatatcaggtgcagaaccat 983 Query: 506 gaatgggttcaaaaagacccggtcccgattcgccaacactggcagatggcagcattccaa 565 | || |||||||| || || |||||||| || | | ||| ||||||||||||||||| | Sbjct: 982 gtataggttcaaagagtccaggtcccgaatcactgagactagcagatggcagcattccta 923 Query: 566 tgcttcctgtgatcattgatgcttcgtccgataatatgtcaccaaaaatattgtttgtca 625 ||||||||||||||||||| ||||| || |||||||| ||||||||||| |||||||| | Sbjct: 922 tgcttcctgtgatcattgaagcttcatcggataatatatcaccaaaaatgttgtttgtga 863 Query: 626 caatcgtgtcaaactgttt 644 | || |||||||||||||| Sbjct: 862 cgatggtgtcaaactgttt 844
>gb|AY085451.1| Arabidopsis thaliana clone 152141 mRNA, complete sequence Length = 1420 Score = 180 bits (91), Expect = 4e-42 Identities = 217/259 (83%) Strand = Plus / Minus Query: 386 cttcgattctctttgcagcactttctacgccaaggccatatttcaatagcattgccgcac 445 |||| |||||||| || || ||||| | ||||| || ||||||| |||||||| || | Sbjct: 1116 cttcaattctcttggctgccttttcttctccaagtccgtatttcagaagcattgcagcgc 1057 Query: 446 taagaattgtagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccat 505 | ||||| || || |||||||||||||| ||||| |||||||| ||||| ||||| |||| Sbjct: 1056 ttagaatggttgccaatgggtttgccttatcctgtccagcaatatcaggtgcagaaccat 997 Query: 506 gaatgggttcaaaaagacccggtcccgattcgccaacactggcagatggcagcattccaa 565 | || |||||||| || || |||||||| || | | ||| ||||||||||||||||| | Sbjct: 996 gtataggttcaaagagtccaggtcccgaatcactgagactagcagatggcagcattccta 937 Query: 566 tgcttcctgtgatcattgatgcttcgtccgataatatgtcaccaaaaatattgtttgtca 625 ||||||||||||||||||| ||||| || |||||||| ||||||||||| |||||||| | Sbjct: 936 tgcttcctgtgatcattgaagcttcatcggataatatatcaccaaaaatgttgtttgtga 877 Query: 626 caatcgtgtcaaactgttt 644 | || |||||||||||||| Sbjct: 876 cgatggtgtcaaactgttt 858
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 174 bits (88), Expect = 2e-40 Identities = 139/156 (89%) Strand = Plus / Minus Query: 324 cgttccaggagaatatatgtccccagttcggaacccattgtccagtgtctctgtaaccgc 383 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||| || Sbjct: 25303239 cgttccaggagaatatatgtccccagttcggaacccgttgtttagtgtctctgtaactgc 25303180 Query: 384 aacttcgattctctttgcagcactttctacgccaaggccatatttcaatagcattgccgc 443 |||| | ||||||||||||| ||||| | ||||||||||| ||||||||| || || Sbjct: 25303179 ggcttcaactctctttgcagcattttcttctccaaggccataccgcaatagcatggcagc 25303120 Query: 444 actaagaattgtagctaatgggtttgccttgtcctg 479 |||||||||||||||||||||||||||||| ||||| Sbjct: 25303119 actaagaattgtagctaatgggtttgccttatcctg 25303084 Score = 143 bits (72), Expect = 8e-31 Identities = 102/112 (91%) Strand = Plus / Minus Query: 530 ccgattcgccaacactggcagatggcagcattccaatgcttcctgtgatcattgatgctt 589 ||||||| ||||||||||||||||| ||||||||||||||||| || | ||||||||||| Sbjct: 25302831 ccgattcaccaacactggcagatgggagcattccaatgcttccagtaagcattgatgctt 25302772 Query: 590 cgtccgataatatgtcaccaaaaatattgtttgtcacaatcgtgtcaaactg 641 | || || |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 25302771 catcagacaatatgtcaccaaaaatattgtttgtgacaattgtgtcaaactg 25302720 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 266 tctgcgactccagagccttcaggacttcctctcccattcgcttgcatccaaccaa 320 |||||||||| | || ||||||||||||||||||||||||||||||||| ||||| Sbjct: 25303853 tctgcgactctacagtcttcaggacttcctctcccattcgcttgcatccgaccaa 25303799 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 476 cctggccagcaatgtcaggagcagagccatgaatgggttcaaaaagacccggtccc 531 |||| ||||||||||| || ||||| |||||||| || ||||||||||| |||||| Sbjct: 25302983 cctgcccagcaatgtcgggcgcagaaccatgaataggctcaaaaagacctggtccc 25302928
>gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genomic sequence, complete sequence Length = 152828 Score = 174 bits (88), Expect = 2e-40 Identities = 139/156 (89%) Strand = Plus / Plus Query: 324 cgttccaggagaatatatgtccccagttcggaacccattgtccagtgtctctgtaaccgc 383 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||| || Sbjct: 140121 cgttccaggagaatatatgtccccagttcggaacccgttgtttagtgtctctgtaactgc 140180 Query: 384 aacttcgattctctttgcagcactttctacgccaaggccatatttcaatagcattgccgc 443 |||| | ||||||||||||| ||||| | ||||||||||| ||||||||| || || Sbjct: 140181 ggcttcaactctctttgcagcattttcttctccaaggccataccgcaatagcatggcagc 140240 Query: 444 actaagaattgtagctaatgggtttgccttgtcctg 479 |||||||||||||||||||||||||||||| ||||| Sbjct: 140241 actaagaattgtagctaatgggtttgccttatcctg 140276 Score = 143 bits (72), Expect = 8e-31 Identities = 102/112 (91%) Strand = Plus / Plus Query: 530 ccgattcgccaacactggcagatggcagcattccaatgcttcctgtgatcattgatgctt 589 ||||||| ||||||||||||||||| ||||||||||||||||| || | ||||||||||| Sbjct: 140529 ccgattcaccaacactggcagatgggagcattccaatgcttccagtaagcattgatgctt 140588 Query: 590 cgtccgataatatgtcaccaaaaatattgtttgtcacaatcgtgtcaaactg 641 | || || |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 140589 catcagacaatatgtcaccaaaaatattgtttgtgacaattgtgtcaaactg 140640 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 266 tctgcgactccagagccttcaggacttcctctcccattcgcttgcatccaaccaa 320 |||||||||| | || ||||||||||||||||||||||||||||||||| ||||| Sbjct: 139507 tctgcgactctacagtcttcaggacttcctctcccattcgcttgcatccgaccaa 139561 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 476 cctggccagcaatgtcaggagcagagccatgaatgggttcaaaaagacccggtccc 531 |||| ||||||||||| || ||||| |||||||| || ||||||||||| |||||| Sbjct: 140377 cctgcccagcaatgtcgggcgcagaaccatgaataggctcaaaaagacctggtccc 140432
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 174 bits (88), Expect = 2e-40 Identities = 139/156 (89%) Strand = Plus / Minus Query: 324 cgttccaggagaatatatgtccccagttcggaacccattgtccagtgtctctgtaaccgc 383 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||| || Sbjct: 25394548 cgttccaggagaatatatgtccccagttcggaacccgttgtttagtgtctctgtaactgc 25394489 Query: 384 aacttcgattctctttgcagcactttctacgccaaggccatatttcaatagcattgccgc 443 |||| | ||||||||||||| ||||| | ||||||||||| ||||||||| || || Sbjct: 25394488 ggcttcaactctctttgcagcattttcttctccaaggccataccgcaatagcatggcagc 25394429 Query: 444 actaagaattgtagctaatgggtttgccttgtcctg 479 |||||||||||||||||||||||||||||| ||||| Sbjct: 25394428 actaagaattgtagctaatgggtttgccttatcctg 25394393 Score = 143 bits (72), Expect = 8e-31 Identities = 102/112 (91%) Strand = Plus / Minus Query: 530 ccgattcgccaacactggcagatggcagcattccaatgcttcctgtgatcattgatgctt 589 ||||||| ||||||||||||||||| ||||||||||||||||| || | ||||||||||| Sbjct: 25394140 ccgattcaccaacactggcagatgggagcattccaatgcttccagtaagcattgatgctt 25394081 Query: 590 cgtccgataatatgtcaccaaaaatattgtttgtcacaatcgtgtcaaactg 641 | || || |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 25394080 catcagacaatatgtcaccaaaaatattgtttgtgacaattgtgtcaaactg 25394029 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 266 tctgcgactccagagccttcaggacttcctctcccattcgcttgcatccaaccaa 320 |||||||||| | || ||||||||||||||||||||||||||||||||| ||||| Sbjct: 25395162 tctgcgactctacagtcttcaggacttcctctcccattcgcttgcatccgaccaa 25395108 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 476 cctggccagcaatgtcaggagcagagccatgaatgggttcaaaaagacccggtccc 531 |||| ||||||||||| || ||||| |||||||| || ||||||||||| |||||| Sbjct: 25394292 cctgcccagcaatgtcgggcgcagaaccatgaataggctcaaaaagacctggtccc 25394237
>emb|BX815110.1|CNS0ABD5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS33ZE01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1375 Score = 172 bits (87), Expect = 9e-40 Identities = 216/259 (83%) Strand = Plus / Minus Query: 386 cttcgattctctttgcagcactttctacgccaaggccatatttcaatagcattgccgcac 445 |||| |||||||| || || ||||| | ||||| || ||||||| |||||||| || | Sbjct: 1102 cttcaattctcttggctgccttttcttctccaagtccgtatttcagaagcattgcagcgc 1043 Query: 446 taagaattgtagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccat 505 | ||||| || || |||||||||||||| ||||| |||||||| ||||| ||||| |||| Sbjct: 1042 ttagaatggttgccaatgggtttgccttatcctgtccagcaatatcaggtgcagaaccat 983 Query: 506 gaatgggttcaaaaagacccggtcccgattcgccaacactggcagatggcagcattccaa 565 | || |||||||| || || |||| ||| || | | ||| ||||||||||||||||| | Sbjct: 982 gtataggttcaaagagtccaggtcgcgaatcactgagactagcagatggcagcattccta 923 Query: 566 tgcttcctgtgatcattgatgcttcgtccgataatatgtcaccaaaaatattgtttgtca 625 ||||||||||||||||||| ||||| || |||||||| ||||||||||| |||||||| | Sbjct: 922 tgcttcctgtgatcattgaagcttcatcggataatatatcaccaaaaatgttgtttgtga 863 Query: 626 caatcgtgtcaaactgttt 644 | || |||||||||||||| Sbjct: 862 cgatggtgtcaaactgttt 844
>ref|NM_121424.4| Arabidopsis thaliana 3-isopropylmalate dehydrogenase/ oxidoreductase AT5G14200 transcript variant AT5G14200.1 mRNA, complete cds Length = 1377 Score = 149 bits (75), Expect = 1e-32 Identities = 207/251 (82%) Strand = Plus / Minus Query: 394 ctctttgcagcactttctacgccaaggccatatttcaatagcattgccgcactaagaatt 453 ||||||||||| ||||| | ||||| ||||| |||| ||||| ||||| || ||||| Sbjct: 1103 ctctttgcagccttttcttctccaagtccatacttcagaagcatcgccgcgctgagaatg 1044 Query: 454 gtagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccatgaatgggt 513 || || ||||||||||||||||| || ||||| || || || || || ||||| || ||| Sbjct: 1043 gtggccaatgggtttgccttgtcttgtccagctatatctggtgctgaaccatgtataggt 984 Query: 514 tcaaaaagacccggtcccgattcgccaacactggcagatggcagcattccaatgcttcct 573 ||||| || || ||||||||||| || | ||| |||||||| ||||||||||||||||| Sbjct: 983 tcaaagagtccaggtcccgattcaccgagactagcagatggaagcattccaatgcttcca 924 Query: 574 gtgatcattgatgcttcgtccgataatatgtcaccaaaaatattgtttgtcacaatcgtg 633 ||||||||||| ||||| || || ||||| ||||||||||| || || || || || ||| Sbjct: 923 gtgatcattgaagcttcatcagacaatatatcaccaaaaatgttattggtaacgattgtg 864 Query: 634 tcaaactgttt 644 ||||||||||| Sbjct: 863 tcaaactgttt 853
>ref|NM_001036803.1| Arabidopsis thaliana 3-isopropylmalate dehydrogenase/ oxidoreductase AT5G14200 transcript variant AT5G14200.3 mRNA, complete cds Length = 1463 Score = 149 bits (75), Expect = 1e-32 Identities = 207/251 (82%) Strand = Plus / Minus Query: 394 ctctttgcagcactttctacgccaaggccatatttcaatagcattgccgcactaagaatt 453 ||||||||||| ||||| | ||||| ||||| |||| ||||| ||||| || ||||| Sbjct: 1103 ctctttgcagccttttcttctccaagtccatacttcagaagcatcgccgcgctgagaatg 1044 Query: 454 gtagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccatgaatgggt 513 || || ||||||||||||||||| || ||||| || || || || || ||||| || ||| Sbjct: 1043 gtggccaatgggtttgccttgtcttgtccagctatatctggtgctgaaccatgtataggt 984 Query: 514 tcaaaaagacccggtcccgattcgccaacactggcagatggcagcattccaatgcttcct 573 ||||| || || ||||||||||| || | ||| |||||||| ||||||||||||||||| Sbjct: 983 tcaaagagtccaggtcccgattcaccgagactagcagatggaagcattccaatgcttcca 924 Query: 574 gtgatcattgatgcttcgtccgataatatgtcaccaaaaatattgtttgtcacaatcgtg 633 ||||||||||| ||||| || || ||||| ||||||||||| || || || || || ||| Sbjct: 923 gtgatcattgaagcttcatcagacaatatatcaccaaaaatgttattggtaacgattgtg 864 Query: 634 tcaaactgttt 644 ||||||||||| Sbjct: 863 tcaaactgttt 853
>gb|BT015784.1| Arabidopsis thaliana At5g14200 mRNA, complete cds Length = 1230 Score = 149 bits (75), Expect = 1e-32 Identities = 207/251 (82%) Strand = Plus / Minus Query: 394 ctctttgcagcactttctacgccaaggccatatttcaatagcattgccgcactaagaatt 453 ||||||||||| ||||| | ||||| ||||| |||| ||||| ||||| || ||||| Sbjct: 1085 ctctttgcagccttttcttctccaagtccatacttcagaagcatcgccgcgctgagaatg 1026 Query: 454 gtagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccatgaatgggt 513 || || ||||||||||||||||| || ||||| || || || || || ||||| || ||| Sbjct: 1025 gtggccaatgggtttgccttgtcttgtccagctatatctggtgctgaaccatgtataggt 966 Query: 514 tcaaaaagacccggtcccgattcgccaacactggcagatggcagcattccaatgcttcct 573 ||||| || || ||||||||||| || | ||| |||||||| ||||||||||||||||| Sbjct: 965 tcaaagagtccaggtcccgattcaccgagactagcagatggaagcattccaatgcttcca 906 Query: 574 gtgatcattgatgcttcgtccgataatatgtcaccaaaaatattgtttgtcacaatcgtg 633 ||||||||||| ||||| || || ||||| ||||||||||| || || || || || ||| Sbjct: 905 gtgatcattgaagcttcatcagacaatatatcaccaaaaatgttattggtaacgattgtg 846 Query: 634 tcaaactgttt 644 ||||||||||| Sbjct: 845 tcaaactgttt 835
>gb|AY074587.1| Arabidopsis thaliana AT5g14200/MUA22_20 mRNA, complete cds Length = 1360 Score = 149 bits (75), Expect = 1e-32 Identities = 207/251 (82%) Strand = Plus / Minus Query: 394 ctctttgcagcactttctacgccaaggccatatttcaatagcattgccgcactaagaatt 453 ||||||||||| ||||| | ||||| ||||| |||| ||||| ||||| || ||||| Sbjct: 1099 ctctttgcagccttttcttctccaagtccatacttcagaagcatcgccgcgctgagaatg 1040 Query: 454 gtagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccatgaatgggt 513 || || ||||||||||||||||| || ||||| || || || || || ||||| || ||| Sbjct: 1039 gtggccaatgggtttgccttgtcttgtccagctatatctggtgctgaaccatgtataggt 980 Query: 514 tcaaaaagacccggtcccgattcgccaacactggcagatggcagcattccaatgcttcct 573 ||||| || || ||||||||||| || | ||| |||||||| ||||||||||||||||| Sbjct: 979 tcaaagagtccaggtcccgattcaccgagactagcagatggaagcattccaatgcttcca 920 Query: 574 gtgatcattgatgcttcgtccgataatatgtcaccaaaaatattgtttgtcacaatcgtg 633 ||||||||||| ||||| || || ||||| ||||||||||| || || || || || ||| Sbjct: 919 gtgatcattgaagcttcatcagacaatatatcaccaaaaatgttattggtaacgattgtg 860 Query: 634 tcaaactgttt 644 ||||||||||| Sbjct: 859 tcaaactgttt 849
>emb|BX831418.1|CNS09ZG0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS88ZF05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1320 Score = 149 bits (75), Expect = 1e-32 Identities = 207/251 (82%) Strand = Plus / Minus Query: 394 ctctttgcagcactttctacgccaaggccatatttcaatagcattgccgcactaagaatt 453 ||||||||||| ||||| | ||||| ||||| |||| ||||| ||||| || ||||| Sbjct: 1077 ctctttgcagccttttcttctccaagtccatacttcagaagcatcgccgcgctgagaatg 1018 Query: 454 gtagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccatgaatgggt 513 || || ||||||||||||||||| || ||||| || || || || || ||||| || ||| Sbjct: 1017 gtggccaatgggtttgccttgtcttgtccagctatatctggtgctgaaccatgtataggt 958 Query: 514 tcaaaaagacccggtcccgattcgccaacactggcagatggcagcattccaatgcttcct 573 ||||| || || ||||||||||| || | ||| |||||||| ||||||||||||||||| Sbjct: 957 tcaaagagtccaggtcccgattcaccgagactagcagatggaagcattccaatgcttcca 898 Query: 574 gtgatcattgatgcttcgtccgataatatgtcaccaaaaatattgtttgtcacaatcgtg 633 ||||||||||| ||||| || || ||||| ||||||||||| || || || || || ||| Sbjct: 897 gtgatcattgaagcttcatcagacaatatatcaccaaaaatgttattggtaacgattgtg 838 Query: 634 tcaaactgttt 644 ||||||||||| Sbjct: 837 tcaaactgttt 827
>gb|BT021093.1| Arabidopsis thaliana At5g14200 gene, complete cds Length = 1290 Score = 149 bits (75), Expect = 1e-32 Identities = 207/251 (82%) Strand = Plus / Minus Query: 394 ctctttgcagcactttctacgccaaggccatatttcaatagcattgccgcactaagaatt 453 ||||||||||| ||||| | ||||| ||||| |||| ||||| ||||| || ||||| Sbjct: 1087 ctctttgcagccttttcttctccaagtccatacttcagaagcatcgccgcgctgagaatg 1028 Query: 454 gtagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccatgaatgggt 513 || || ||||||||||||||||| || ||||| || || || || || ||||| || ||| Sbjct: 1027 gtggccaatgggtttgccttgtcttgtccagctatatctggtgctgaaccatgtataggt 968 Query: 514 tcaaaaagacccggtcccgattcgccaacactggcagatggcagcattccaatgcttcct 573 ||||| || || ||||||||||| || | ||| |||||||| ||||||||||||||||| Sbjct: 967 tcaaagagtccaggtcccgattcaccgagactagcagatggaagcattccaatgcttcca 908 Query: 574 gtgatcattgatgcttcgtccgataatatgtcaccaaaaatattgtttgtcacaatcgtg 633 ||||||||||| ||||| || || ||||| ||||||||||| || || || || || ||| Sbjct: 907 gtgatcattgaagcttcatcagacaatatatcaccaaaaatgttattggtaacgattgtg 848 Query: 634 tcaaactgttt 644 ||||||||||| Sbjct: 847 tcaaactgttt 837
>gb|BT013160.1| Lycopersicon esculentum clone 134192F, mRNA sequence Length = 1488 Score = 141 bits (71), Expect = 3e-30 Identities = 188/227 (82%) Strand = Plus / Minus Query: 418 aggccatatttcaatagcattgccgcactaagaattgtagctaatgggtttgccttgtcc 477 |||||||| |||| ||||| || ||||| || ||||| || || |||||||| || ||| Sbjct: 1068 aggccatacttcagaagcatagcagcactgagcattgttgccaaagggtttgctttatcc 1009 Query: 478 tggccagcaatgtcaggagcagagccatgaatgggttcaaaaagacccggtcccgattcg 537 || |||||||| ||||||||||| ||||| || |||||||| | || ||||||| | | Sbjct: 1008 tgcccagcaatatcaggagcagaaccatgtataggttcaaataatccaggtcccgctgca 949 Query: 538 ccaacactggcagatggcagcattccaatgcttcctgtgatcattgatgcttcgtccgat 597 |||| |||||||||||| ||||| || || |||||||| |||||||||||||| || || Sbjct: 948 ccaagactggcagatggaagcatcccgatacttcctgtaatcattgatgcttcatcggac 889 Query: 598 aatatgtcaccaaaaatattgtttgtcacaatcgtgtcaaactgttt 644 | ||||||||||| || |||||||||||||| || ||||||||||| Sbjct: 888 aggatgtcaccaaatatgttgtttgtcacaattgtatcaaactgttt 842
>emb|BX831381.1|CNS09ZGM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS84ZG10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1329 Score = 141 bits (71), Expect = 3e-30 Identities = 206/251 (82%) Strand = Plus / Minus Query: 394 ctctttgcagcactttctacgccaaggccatatttcaatagcattgccgcactaagaatt 453 ||||||||||| ||||| | ||||| ||||| |||| ||||| ||||| || ||||| Sbjct: 1081 ctctttgcagccttttcttctccaagtccatacttcagaagcatcgccgcgctgagaatg 1022 Query: 454 gtagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccatgaatgggt 513 || || ||||||||||||||||| || ||||| || || || || || ||||| || ||| Sbjct: 1021 gtggccaatgggtttgccttgtcttgtccagctatatctggtgctgaaccatgtataggt 962 Query: 514 tcaaaaagacccggtcccgattcgccaacactggcagatggcagcattccaatgcttcct 573 ||||| || || ||||||||||| || | ||| |||||||| ||||||||||||||||| Sbjct: 961 tcaaagagtccaggtcccgattcaccgagactagcagatggaagcattccaatgcttcca 902 Query: 574 gtgatcattgatgcttcgtccgataatatgtcaccaaaaatattgtttgtcacaatcgtg 633 ||||||||||| ||||| || || ||||| |||||||| || || || || || || ||| Sbjct: 901 gtgatcattgaagcttcatcagacaatatatcaccaaagatgttattggtaacgattgtg 842 Query: 634 tcaaactgttt 644 ||||||||||| Sbjct: 841 tcaaactgttt 831
>ref|NM_102856.1| Arabidopsis thaliana 3-isopropylmalate dehydrogenase/ oxidoreductase AT1G31180 mRNA, complete cds Length = 1347 Score = 139 bits (70), Expect = 1e-29 Identities = 205/250 (82%) Strand = Plus / Minus Query: 395 tctttgcagcactttctacgccaaggccatatttcaatagcattgccgcactaagaattg 454 |||||||||| ||||| | ||||| ||||| || | ||||| |||||||| ||||| | Sbjct: 1090 tctttgcagccttttcttctccaagtccatacttgagaagcatcgccgcactgagaatgg 1031 Query: 455 tagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccatgaatgggtt 514 | || ||||||||||||||||| || ||||| || || || || || ||||| || |||| Sbjct: 1030 tggccaatgggtttgccttgtcttgtccagctatatctggtgctgaaccatgtataggtt 971 Query: 515 caaaaagacccggtcccgattcgccaacactggcagatggcagcattccaatgcttcctg 574 |||| || || ||||||||||| |||| ||| |||||||| ||||| |||||||| || | Sbjct: 970 caaagagtccaggtcccgattcaccaagacttgcagatggaagcatcccaatgctaccag 911 Query: 575 tgatcattgatgcttcgtccgataatatgtcaccaaaaatattgtttgtcacaatcgtgt 634 |||||||||| ||||| || || ||||| ||||||||||| || || || || || |||| Sbjct: 910 tgatcattgaagcttcatcagacaatatatcaccaaaaatgttattggtgacgattgtgt 851 Query: 635 caaactgttt 644 |||||||||| Sbjct: 850 caaactgttt 841
>emb|BX815528.1|CNS0ACYQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZE10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1292 Score = 139 bits (70), Expect = 1e-29 Identities = 205/250 (82%) Strand = Plus / Minus Query: 395 tctttgcagcactttctacgccaaggccatatttcaatagcattgccgcactaagaattg 454 |||||||||| ||||| | ||||| ||||| || | ||||| |||||||| ||||| | Sbjct: 1066 tctttgcagccttttcttctccaagtccatacttgagaagcatcgccgcactgagaatgg 1007 Query: 455 tagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccatgaatgggtt 514 | || ||||||||||||||||| || ||||| || || || || || ||||| || |||| Sbjct: 1006 tggccaatgggtttgccttgtcttgtccagctatatctggtgctgaaccatgtataggtt 947 Query: 515 caaaaagacccggtcccgattcgccaacactggcagatggcagcattccaatgcttcctg 574 |||| || || ||||||||||| |||| ||| |||||||| ||||| |||||||| || | Sbjct: 946 caaagagtccaggtcccgattcaccaagacttgcagatggaagcatcccaatgctaccag 887 Query: 575 tgatcattgatgcttcgtccgataatatgtcaccaaaaatattgtttgtcacaatcgtgt 634 |||||||||| ||||| || || ||||| ||||||||||| || || || || || |||| Sbjct: 886 tgatcattgaagcttcatcagacaatatatcaccaaaaatgttattggtgacgattgtgt 827 Query: 635 caaactgttt 644 |||||||||| Sbjct: 826 caaactgttt 817
>emb|BX815259.1|CNS0ACUD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS47ZC06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1371 Score = 139 bits (70), Expect = 1e-29 Identities = 205/250 (82%) Strand = Plus / Minus Query: 395 tctttgcagcactttctacgccaaggccatatttcaatagcattgccgcactaagaattg 454 |||||||||| ||||| | ||||| ||||| || | ||||| |||||||| ||||| | Sbjct: 1142 tctttgcagccttttcttctccaagtccatacttgagaagcatcgccgcactgagaatgg 1083 Query: 455 tagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccatgaatgggtt 514 | || ||||||||||||||||| || ||||| || || || || || ||||| || |||| Sbjct: 1082 tggccaatgggtttgccttgtcttgtccagctatatctggtgctgaaccatgtataggtt 1023 Query: 515 caaaaagacccggtcccgattcgccaacactggcagatggcagcattccaatgcttcctg 574 |||| || || ||||||||||| |||| ||| |||||||| ||||| |||||||| || | Sbjct: 1022 caaagagtccaggtcccgattcaccaagacttgcagatggaagcatcccaatgctaccag 963 Query: 575 tgatcattgatgcttcgtccgataatatgtcaccaaaaatattgtttgtcacaatcgtgt 634 |||||||||| ||||| || || ||||| ||||||||||| || || || || || |||| Sbjct: 962 tgatcattgaagcttcatcagacaatatatcaccaaaaatgttattggtgacgattgtgt 903 Query: 635 caaactgttt 644 |||||||||| Sbjct: 902 caaactgttt 893
>gb|AY087344.1| Arabidopsis thaliana clone 34420 mRNA, complete sequence Length = 1348 Score = 139 bits (70), Expect = 1e-29 Identities = 205/250 (82%) Strand = Plus / Minus Query: 395 tctttgcagcactttctacgccaaggccatatttcaatagcattgccgcactaagaattg 454 |||||||||| ||||| | ||||| ||||| || | ||||| |||||||| ||||| | Sbjct: 1091 tctttgcagccttttcttctccaagtccatacttgagaagcatcgccgcactgagaatgg 1032 Query: 455 tagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccatgaatgggtt 514 | || ||||||||||||||||| || ||||| || || || || || ||||| || |||| Sbjct: 1031 tggccaatgggtttgccttgtcttgtccagctatatctggtgctgaaccatgtataggtt 972 Query: 515 caaaaagacccggtcccgattcgccaacactggcagatggcagcattccaatgcttcctg 574 |||| || || ||||||||||| |||| ||| |||||||| ||||| |||||||| || | Sbjct: 971 caaagagtccaggtcccgattcaccaagacttgcagatggaagcatcccaatgctaccag 912 Query: 575 tgatcattgatgcttcgtccgataatatgtcaccaaaaatattgtttgtcacaatcgtgt 634 |||||||||| ||||| || || ||||| ||||||||||| || || || || || |||| Sbjct: 911 tgatcattgaagcttcatcagacaatatatcaccaaaaatgttattggtgacgattgtgt 852 Query: 635 caaactgttt 644 |||||||||| Sbjct: 851 caaactgttt 842
>dbj|AK118237.1| Arabidopsis thaliana At1g31180 mRNA for putative 3-isopropylmalate dehydrogenase, complete cds, clone: RAFL19-54-L24 Length = 1203 Score = 139 bits (70), Expect = 1e-29 Identities = 205/250 (82%) Strand = Plus / Minus Query: 395 tctttgcagcactttctacgccaaggccatatttcaatagcattgccgcactaagaattg 454 |||||||||| ||||| | ||||| ||||| || | ||||| |||||||| ||||| | Sbjct: 955 tctttgcagccttttcttctccaagtccatacttgagaagcatcgccgcactgagaatgg 896 Query: 455 tagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccatgaatgggtt 514 | || ||||||||||||||||| || ||||| || || || || || ||||| || |||| Sbjct: 895 tggccaatgggtttgccttgtcttgtccagctatatctggtgctgaaccatgtataggtt 836 Query: 515 caaaaagacccggtcccgattcgccaacactggcagatggcagcattccaatgcttcctg 574 |||| || || ||||||||||| |||| ||| |||||||| ||||| |||||||| || | Sbjct: 835 caaagagtccaggtcccgattcaccaagacttgcagatggaagcatcccaatgctaccag 776 Query: 575 tgatcattgatgcttcgtccgataatatgtcaccaaaaatattgtttgtcacaatcgtgt 634 |||||||||| ||||| || || ||||| ||||||||||| || || || || || |||| Sbjct: 775 tgatcattgaagcttcatcagacaatatatcaccaaaaatgttattggtgacgattgtgt 716 Query: 635 caaactgttt 644 |||||||||| Sbjct: 715 caaactgttt 706
>ref|NM_001036802.1| Arabidopsis thaliana 3-isopropylmalate dehydrogenase/ oxidoreductase AT5G14200 transcript variant AT5G14200.2 mRNA, complete cds Length = 1379 Score = 137 bits (69), Expect = 5e-29 Identities = 183/221 (82%) Strand = Plus / Minus Query: 394 ctctttgcagcactttctacgccaaggccatatttcaatagcattgccgcactaagaatt 453 ||||||||||| ||||| | ||||| ||||| |||| ||||| ||||| || ||||| Sbjct: 1105 ctctttgcagccttttcttctccaagtccatacttcagaagcatcgccgcgctgagaatg 1046 Query: 454 gtagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccatgaatgggt 513 || || ||||||||||||||||| || ||||| || || || || || ||||| || ||| Sbjct: 1045 gtggccaatgggtttgccttgtcttgtccagctatatctggtgctgaaccatgtataggt 986 Query: 514 tcaaaaagacccggtcccgattcgccaacactggcagatggcagcattccaatgcttcct 573 ||||| || || ||||||||||| || | ||| |||||||| ||||||||||||||||| Sbjct: 985 tcaaagagtccaggtcccgattcaccgagactagcagatggaagcattccaatgcttcca 926 Query: 574 gtgatcattgatgcttcgtccgataatatgtcaccaaaaat 614 ||||||||||| ||||| || || ||||| ||||||||||| Sbjct: 925 gtgatcattgaagcttcatcagacaatatatcaccaaaaat 885
>emb|X59970.1|BNIPMDH B.napus mRNA for 3-isopropylmalate dehydrogenase Length = 1428 Score = 131 bits (66), Expect = 3e-27 Identities = 153/182 (84%) Strand = Plus / Minus Query: 463 gggtttgccttgtcctggccagcaatgtcaggagcagagccatgaatgggttcaaaaaga 522 |||||||| || ||||| |||||||| ||||| ||||| ||||| || |||||||| || Sbjct: 1023 gggtttgctttatcctgtccagcaatatcaggtgcagaaccatgtataggttcaaagagt 964 Query: 523 cccggtcccgattcgccaacactggcagatggcagcattccaatgcttcctgtgatcatt 582 || |||||||| || | | ||| ||||| || ||||| || ||||||||||||||||| Sbjct: 963 ccaggtcccgaatcactgagactagcagagggaagcatgccgatgcttcctgtgatcatc 904 Query: 583 gatgcttcgtccgataatatgtcaccaaaaatattgtttgtcacaatcgtgtcaaactgt 642 || ||||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||| Sbjct: 903 gacgcttcatcggataatatatcaccaaaaatgttgtttgtaacaatggtgtcaaactgt 844 Query: 643 tt 644 || Sbjct: 843 tt 842
>emb|BX817489.1|CNS0ACN3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL26ZC03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1252 Score = 131 bits (66), Expect = 3e-27 Identities = 204/250 (81%) Strand = Plus / Minus Query: 395 tctttgcagcactttctacgccaaggccatatttcaatagcattgccgcactaagaattg 454 |||||||||| ||||| | ||||| ||||| || | ||||| |||||||| ||||| | Sbjct: 1033 tctttgcagccttttcttctccaagtccatacttgagaagcatcgccgcactgagaatgg 974 Query: 455 tagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccatgaatgggtt 514 | || ||||||||||||||||| || ||||| || || || || || ||||| || |||| Sbjct: 973 tggccaatgggtttgccttgtcttgtccagctatatctggtgctgaaccatgtataggtt 914 Query: 515 caaaaagacccggtcccgattcgccaacactggcagatggcagcattccaatgcttcctg 574 |||| || || ||||||||||| |||| ||| |||||||| ||||| |||||||| || | Sbjct: 913 caaagagtccaggtcccgattcaccaatacttgcagatggaagcatcccaatgctaccag 854 Query: 575 tgatcattgatgcttcgtccgataatatgtcaccaaaaatattgtttgtcacaatcgtgt 634 |||||||||| ||||| || || ||||| ||||||||||| || || || || || |||| Sbjct: 853 tgatcattgaagcttcatcagacaatatatcaccaaaaatgttattggtgacgattgtgt 794 Query: 635 caaactgttt 644 || ||||||| Sbjct: 793 cacactgttt 784
>emb|BX813607.1|CNS0ADTH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB27ZF05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1293 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Minus Query: 433 agcattgccgcactaagaattgtagctaatgggtttgccttgtcctggccagcaatgtca 492 ||||| |||||||| ||||| || || ||||||||||||||||| || ||||| || || Sbjct: 1031 agcatcgccgcactgagaatggtggccaatgggtttgccttgtcttgtccagctatatct 972 Query: 493 ggagcagagccatgaatgggttcaaaaagacccggtcccgattcgccaacactggcagat 552 || || || ||||| || |||||||| || | ||||||||||| |||| ||| |||||| Sbjct: 971 ggtgctgaaccatgtataggttcaaagagtgcaggtcccgattcaccaagacttgcagat 912 Query: 553 ggcagcattccaatgcttcctgtgatcattgatgcttcgtccgataatatgtcaccaaaa 612 || ||||| |||||||| || ||||||||||| ||||| || || ||||| ||||||||| Sbjct: 911 ggaagcatcccaatgctaccagtgatcattgaagcttcatcagacaatatatcaccaaaa 852 Query: 613 atattgtttgtcacaatcgtgtcaaactgttt 644 || || || || || || |||| ||||||||| Sbjct: 851 atgttattggtgacgattgtgtgaaactgttt 820
>gb|AC018848.6|AC018848 Arabidopsis thaliana chromosome 1 BAC F5I6 genomic sequence, complete sequence Length = 132990 Score = 117 bits (59), Expect = 5e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 547 gcagatggcagcattccaatgcttcctgtgatcattgatgcttcgtccgataatatgtca 606 ||||||||||||||||| |||||||||||||||||||| ||||| || |||||||| ||| Sbjct: 117020 gcagatggcagcattcctatgcttcctgtgatcattgaagcttcatcggataatatatca 116961 Query: 607 ccaaaaatattgtttgtcacaatcgtgtcaaactg 641 |||||||| |||||||| || || ||||||||||| Sbjct: 116960 ccaaaaatgttgtttgtgacgatggtgtcaaactg 116926 Score = 44.1 bits (22), Expect = 0.56 Identities = 76/94 (80%) Strand = Plus / Minus Query: 386 cttcgattctctttgcagcactttctacgccaaggccatatttcaatagcattgccgcac 445 |||| |||||||| || || ||||| | ||||| || ||||||| |||||||| || | Sbjct: 117368 cttcaattctcttggctgccttttcttctccaagtccgtatttcagaagcattgcagcgc 117309 Query: 446 taagaattgtagctaatgggtttgccttgtcctg 479 | ||||| || || |||||||||||||| ||||| Sbjct: 117308 ttagaatggttgccaatgggtttgccttatcctg 117275
>gb|AC018849.2|AC018849 Arabidopsis thaliana chromosome 1 BAC T21F11 genomic sequence, complete sequence Length = 89811 Score = 117 bits (59), Expect = 5e-23 Identities = 86/95 (90%) Strand = Plus / Plus Query: 547 gcagatggcagcattccaatgcttcctgtgatcattgatgcttcgtccgataatatgtca 606 ||||||||||||||||| |||||||||||||||||||| ||||| || |||||||| ||| Sbjct: 29130 gcagatggcagcattcctatgcttcctgtgatcattgaagcttcatcggataatatatca 29189 Query: 607 ccaaaaatattgtttgtcacaatcgtgtcaaactg 641 |||||||| |||||||| || || ||||||||||| Sbjct: 29190 ccaaaaatgttgtttgtgacgatggtgtcaaactg 29224 Score = 44.1 bits (22), Expect = 0.56 Identities = 76/94 (80%) Strand = Plus / Plus Query: 386 cttcgattctctttgcagcactttctacgccaaggccatatttcaatagcattgccgcac 445 |||| |||||||| || || ||||| | ||||| || ||||||| |||||||| || | Sbjct: 28782 cttcaattctcttggctgccttttcttctccaagtccgtatttcagaagcattgcagcgc 28841 Query: 446 taagaattgtagctaatgggtttgccttgtcctg 479 | ||||| || || |||||||||||||| ||||| Sbjct: 28842 ttagaatggttgccaatgggtttgccttatcctg 28875
>dbj|AB007650.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA22 Length = 65465 Score = 87.7 bits (44), Expect = 4e-14 Identities = 95/112 (84%) Strand = Plus / Minus Query: 530 ccgattcgccaacactggcagatggcagcattccaatgcttcctgtgatcattgatgctt 589 ||||||| || | ||| |||||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 53522 ccgattcaccgagactagcagatggaagcattccaatgcttccagtgatcattgaagctt 53463 Query: 590 cgtccgataatatgtcaccaaaaatattgtttgtcacaatcgtgtcaaactg 641 | || || ||||| ||||||||||| || || || || || ||||||||||| Sbjct: 53462 catcagacaatatatcaccaaaaatgttattggtaacgattgtgtcaaactg 53411 Score = 60.0 bits (30), Expect = 9e-06 Identities = 111/138 (80%) Strand = Plus / Minus Query: 394 ctctttgcagcactttctacgccaaggccatatttcaatagcattgccgcactaagaatt 453 ||||||||||| ||||| | ||||| ||||| |||| ||||| ||||| || ||||| Sbjct: 53739 ctctttgcagccttttcttctccaagtccatacttcagaagcatcgccgcgctgagaatg 53680 Query: 454 gtagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccatgaatgggt 513 || || ||||||||||||||||| || ||||| || || || || || ||||| || ||| Sbjct: 53679 gtggccaatgggtttgccttgtcttgtccagctatatctggtgctgaaccatgtataggt 53620 Query: 514 tcaaaaagacccggtccc 531 ||||| || || |||||| Sbjct: 53619 tcaaagagtccaggtccc 53602
>gb|AC004793.2|F28K20 Arabidopsis thaliana chromosome 1 BAC F28K20 sequence, complete sequence Length = 76458 Score = 79.8 bits (40), Expect = 1e-11 Identities = 94/112 (83%) Strand = Plus / Plus Query: 530 ccgattcgccaacactggcagatggcagcattccaatgcttcctgtgatcattgatgctt 589 ||||||| |||| ||| |||||||| ||||| |||||||| || ||||||||||| |||| Sbjct: 54428 ccgattcaccaagacttgcagatggaagcatcccaatgctaccagtgatcattgaagctt 54487 Query: 590 cgtccgataatatgtcaccaaaaatattgtttgtcacaatcgtgtcaaactg 641 | || || ||||| ||||||||||| || || || || || ||||||||||| Sbjct: 54488 catcagacaatatatcaccaaaaatgttattggtgacgattgtgtcaaactg 54539 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 395 tctttgcagcactttctacgccaaggccatatttcaatagcattgccgcactaagaattg 454 |||||||||| ||||| | ||||| ||||| || | ||||| |||||||| ||||| | Sbjct: 54209 tctttgcagccttttcttctccaagtccatacttgagaagcatcgccgcactgagaatgg 54268 Query: 455 tagctaatgggtttgccttgtcctggccagcaatgtcaggagcagagccatgaatgggtt 514 | || ||||||||||||||||| || ||||| || || || || || ||||| || |||| Sbjct: 54269 tggccaatgggtttgccttgtcttgtccagctatatctggtgctgaaccatgtataggtt 54328 Query: 515 caaaaagacccggtccc 531 |||| || || |||||| Sbjct: 54329 caaagagtccaggtccc 54345
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 463 gggtttgccttgtcctggccagcaatgtcaggagcagagccatgaatgggttcaaaaaga 522 ||||| |||||||| ||||| |||||||| || ||||||||||||| |||||||| ||| Sbjct: 1661259 gggttggccttgtcttggccggcaatgtcgggggcagagccatgaaccggttcaaacaga 1661200 Query: 523 cccggtcccgattc 536 | || |||||||| Sbjct: 1661199 gctggccccgattc 1661186 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 622 gtcacaatcgtgtcaaactgttt 644 ||||||||||||||||||||||| Sbjct: 1661100 gtcacaatcgtgtcaaactgttt 1661078
>ref|XM_752382.1| Ustilago maydis 521 hypothetical protein (UM01328.1) partial mRNA Length = 1161 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 463 gggtttgccttgtcctggccagcaatgtcaggagcagagcc 503 ||||| ||||||||||||||||||||||| || |||||||| Sbjct: 986 gggttcgccttgtcctggccagcaatgtcgggggcagagcc 946
>emb|CT030148.2| Kuenenia stuttgartiensis genome fragment KUST_A (1 of 5) Length = 96717 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 484 gcaatgtcaggagcagagccatgaatgggttcaaaaag 521 ||||||||||| || ||||||||||||||||| ||||| Sbjct: 14595 gcaatgtcaggggcggagccatgaatgggttcgaaaag 14632
>emb|BX569691.1| Synechococcus sp. WH8102 complete genome; segment 3/7 Length = 347365 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 469 gccttgtcctggccagcaatgtcaggagcagagccatg 506 |||||||||||||| || ||||| || ||||||||||| Sbjct: 66870 gccttgtcctggccggcgatgtccggcgcagagccatg 66833
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 44.1 bits (22), Expect = 0.56 Identities = 49/58 (84%) Strand = Plus / Plus Query: 463 gggtttgccttgtcctggccagcaatgtcaggagcagagccatgaatgggttcaaaaa 520 ||||| || ||||| || ||||| |||||||| ||||||||||| | |||||||||| Sbjct: 2652272 gggttggctttgtcttgaccagcgatgtcaggtgcagagccatgtaccggttcaaaaa 2652329
>gb|S83228.1| leu2A=beta-isopropylmalate dehydrogenase [Aspergillus niger, strain A733, mRNA, 1238 nt] Length = 1238 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 480 gccagcaatgtcaggagcagagccatgaat 509 ||||||||| ||||| |||||||||||||| Sbjct: 889 gccagcaatatcaggggcagagccatgaat 860
>gb|U51130.1|ANU51130 Aspergillus niger beta-isopropylmalate dehydrogenase (leu2A) mRNA, complete cds Length = 1238 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 480 gccagcaatgtcaggagcagagccatgaat 509 ||||||||| ||||| |||||||||||||| Sbjct: 889 gccagcaatatcaggggcagagccatgaat 860
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 44.1 bits (22), Expect = 0.56 Identities = 49/58 (84%) Strand = Plus / Plus Query: 463 gggtttgccttgtcctggccagcaatgtcaggagcagagccatgaatgggttcaaaaa 520 ||||| || ||||| || ||||| |||||||| ||||||||||| | |||||||||| Sbjct: 1555047 gggttggctttgtcttgaccagcgatgtcaggtgcagagccatgtaccggttcaaaaa 1555104
>gb|BT013694.1| Lycopersicon esculentum clone 132535R, mRNA sequence Length = 2264 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 gagcaatggaaagggaaaagg 97 ||||||||||||||||||||| Sbjct: 247 gagcaatggaaagggaaaagg 227
>ref|XM_779501.1| PREDICTED: Strongylocentrotus purpuratus similar to calcyphosphine 2 (LOC579381), mRNA Length = 2154 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 agcagacaaacagaaacaaaa 161 ||||||||||||||||||||| Sbjct: 159 agcagacaaacagaaacaaaa 179
>emb|AL117353.6|HSJ944F13 Human DNA sequence from clone RP5-944F13 on chromosome 1p31.2-32.1 Contains part of gene KIAA1365, complete sequence Length = 113515 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 agacaaacagaaacaaaatca 164 ||||||||||||||||||||| Sbjct: 22922 agacaaacagaaacaaaatca 22942
>gb|AC026441.5| Homo sapiens chromosome 5 clone CTD-2280O3, complete sequence Length = 112533 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 495 agcagagccatgaatgggttcaaaa 519 |||||||||||||||| |||||||| Sbjct: 33468 agcagagccatgaatgtgttcaaaa 33492
>gb|AC005341.13| Homo sapiens chromosome , clone RP11-146P2, complete sequence Length = 161449 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 595 gataatatgtcaccaaaaatattgt 619 |||| |||||||||||||||||||| Sbjct: 53267 gatattatgtcaccaaaaatattgt 53243
>gb|AC090614.5| Homo sapiens chromosome 17, clone RP11-577I13, complete sequence Length = 230956 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 595 gataatatgtcaccaaaaatattgt 619 |||| |||||||||||||||||||| Sbjct: 205818 gatattatgtcaccaaaaatattgt 205794
>gb|AC016648.5|AC016648 Homo sapiens chromosome 5 clone RPCI-1_137K24, complete sequence Length = 123946 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 agcagagccatgaatgggttcaaaa 519 |||||||||||||||| |||||||| Sbjct: 97132 agcagagccatgaatgtgttcaaaa 97108
>gb|AY109823.1| Zea mays CL1046_1 mRNA sequence Length = 1535 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 480 gccagcaatgtcaggagcagagccatgaa 508 ||||||||| ||||||||||| ||||||| Sbjct: 1018 gccagcaatatcaggagcagaaccatgaa 990
>gb|AC005828.1|AC005828 Homo sapiens chromosome 17, clone hRPK.269_G_24, complete sequence Length = 163685 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 aatggaaagggaaaaggcgac 101 ||||||||||||||||||||| Sbjct: 62792 aatggaaagggaaaaggcgac 62812
>gb|L06666.1|CLOLEUILV Clostridium pasteurianum isopropylmalate isomerase (leuD) gene 3' end; isopropylmalate dehydrogenase (leuB) gene complete cds; dehydroxyacid dehydrogenase (ilvD) gene, 5' end Length = 2327 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 595 gataatatgtcaccaaaaatattgtttgt 623 |||||||| |||||||| ||||||||||| Sbjct: 1133 gataatatatcaccaaatatattgtttgt 1105
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 40.1 bits (20), Expect = 8.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 463 gggtttgccttgtcctggccagcaatgtcaggagcagagccatg 506 ||||| |||||||| || || || ||||| |||||||||||||| Sbjct: 799168 gggttggccttgtcttgaccggcgatgtctggagcagagccatg 799125
>gb|AF251029.1|AF251029S1 Streptococcus gordonii strain GP204 isopropylmalate dehydrogenase (leuB) and alpha-isopropylmalate isomerase large subunit (leuC) genes, partial cds; and unknown gene Length = 976 Score = 40.1 bits (20), Expect = 8.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 484 gcaatgtcaggagcagagccatgaatgggttcaaaaagac 523 ||||| |||||||| || ||||||||||| ||| |||||| Sbjct: 383 gcaatatcaggagccgaaccatgaatgggctcataaagac 344
>ref|XM_791287.1| PREDICTED: Strongylocentrotus purpuratus similar to Nasopharyngeal epithelium specific protein 1 (LOC591735), partial mRNA Length = 1158 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 aagcagacaaacagaaacaa 159 |||||||||||||||||||| Sbjct: 425 aagcagacaaacagaaacaa 444
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 487 atgtcaggagcagagccatgaatgggttcaaa 518 ||||||||||| |||||||||| |||||||| Sbjct: 196727 atgtcaggagctgagccatgaacaggttcaaa 196758
>gb|AC012022.13| Homo sapiens 3 BAC RP11-117L15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167994 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 601 atgtcaccaaaaatattgtttgtc 624 |||||||| ||||||||||||||| Sbjct: 126490 atgtcacctaaaatattgtttgtc 126513
>ref|NM_001019430.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC31G5.04), partial mRNA Length = 1089 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 484 gcaatgtcaggagcagagccatgaatgggttc 515 ||||| ||||| ||||||||||||| |||||| Sbjct: 884 gcaatatcaggggcagagccatgaacgggttc 853
>gb|AC154563.2| Mus musculus BAC clone RP23-401E22 from chromosome 14, complete sequence Length = 206798 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gcagacaaacagaaacaaaa 161 |||||||||||||||||||| Sbjct: 94934 gcagacaaacagaaacaaaa 94915
>gb|AC079171.22| Homo sapiens X BAC RP11-791M20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 147895 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 acaaacagaaacaaaatcac 165 |||||||||||||||||||| Sbjct: 96573 acaaacagaaacaaaatcac 96554
>emb|Z98979.1|SPAC31G5 S.pombe chromosome I cosmid c31G5 Length = 39729 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 484 gcaatgtcaggagcagagccatgaatgggttc 515 ||||| ||||| ||||||||||||| |||||| Sbjct: 4611 gcaatatcaggggcagagccatgaacgggttc 4580
>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome Length = 2056416 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 484 gcaatgtcaggagcagagccatgaatgggttc 515 ||||| |||||||||||||| ||||| ||||| Sbjct: 669457 gcaatatcaggagcagagccgtgaatcggttc 669488
>emb|AL845531.3| Mouse DNA sequence from clone RP23-232I4 on chromosome 2, complete sequence Length = 120366 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 caggttactgtttacttctg 269 |||||||||||||||||||| Sbjct: 72491 caggttactgtttacttctg 72472
>emb|AL837507.5| Mouse DNA sequence from clone RP23-267B2 on chromosome 4, complete sequence Length = 99832 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 596 ataatatgtcaccaaaaata 615 |||||||||||||||||||| Sbjct: 54325 ataatatgtcaccaaaaata 54344
>emb|AL670544.7| Mouse DNA sequence from clone RP23-16G8 on chromosome X, complete sequence Length = 236946 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 ccttcaggacttcctctcccattc 304 ||||||| |||||||||||||||| Sbjct: 125484 ccttcagtacttcctctcccattc 125507
>dbj|D14585.1|TFE3ID T.ferrooxidans gene for 3-isopropylmalate dehydrogenase, complete cds Length = 1681 Score = 40.1 bits (20), Expect = 8.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 469 gccttgtcctggccagcaatgtcaggagcagagccatgaatgggttca 516 ||||||||||| || ||||| || || || |||||||| ||||||||| Sbjct: 994 gccttgtcctgcccggcaatatccggcgccgagccatggatgggttca 947 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,516,278 Number of Sequences: 3902068 Number of extensions: 5516278 Number of successful extensions: 106387 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 70 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 106142 Number of HSP's gapped (non-prelim): 243 length of query: 645 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 622 effective length of database: 17,143,297,704 effective search space: 10663131171888 effective search space used: 10663131171888 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)