| Clone Name | rbags7m06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY335488.1| Oryza sativa (japonica cultivar-group) enolase (Eno1) mRNA, complete cds Length = 1659 Score = 63.9 bits (32), Expect = 2e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 138 accaaaattggagcaagtttgggggtacatat 169 |||||||||||||||||||||||||||||||| Sbjct: 1546 accaaaattggagcaagtttgggggtacatat 1515
>gb|AC131375.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0015J03, complete sequence Length = 165933 Score = 63.9 bits (32), Expect = 2e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 138 accaaaattggagcaagtttgggggtacatat 169 |||||||||||||||||||||||||||||||| Sbjct: 58107 accaaaattggagcaagtttgggggtacatat 58138
>gb|AC116603.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0015J03, complete sequence Length = 135940 Score = 63.9 bits (32), Expect = 2e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 138 accaaaattggagcaagtttgggggtacatat 169 |||||||||||||||||||||||||||||||| Sbjct: 1894 accaaaattggagcaagtttgggggtacatat 1863
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 63.9 bits (32), Expect = 2e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 138 accaaaattggagcaagtttgggggtacatat 169 |||||||||||||||||||||||||||||||| Sbjct: 4290566 accaaaattggagcaagtttgggggtacatat 4290597
>dbj|AK073662.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048K07, full insert sequence Length = 1651 Score = 63.9 bits (32), Expect = 2e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 138 accaaaattggagcaagtttgggggtacatat 169 |||||||||||||||||||||||||||||||| Sbjct: 1577 accaaaattggagcaagtttgggggtacatat 1546
>gb|U09450.1|OSU09450 Oryza sativa enolase mRNA, complete cds Length = 1687 Score = 63.9 bits (32), Expect = 2e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 138 accaaaattggagcaagtttgggggtacatat 169 |||||||||||||||||||||||||||||||| Sbjct: 1608 accaaaattggagcaagtttgggggtacatat 1577
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 63.9 bits (32), Expect = 2e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 138 accaaaattggagcaagtttgggggtacatat 169 |||||||||||||||||||||||||||||||| Sbjct: 4291387 accaaaattggagcaagtttgggggtacatat 4291418
>gb|DQ083194.1| Oryza sativa (indica cultivar-group) clone 5S7E59 mRNA sequence Length = 127 Score = 52.0 bits (26), Expect = 7e-04 Identities = 26/26 (100%) Strand = Plus / Minus Query: 138 accaaaattggagcaagtttgggggt 163 |||||||||||||||||||||||||| Sbjct: 26 accaaaattggagcaagtttgggggt 1
>dbj|AK099292.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133I04, full insert sequence Length = 1603 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 138 accaaaattggagcaagtttgggggtacatat 169 |||||||| |||||||||| |||||||||||| Sbjct: 1529 accaaaatgggagcaagttggggggtacatat 1498
>emb|AL356512.19| Human DNA sequence from clone RP11-156E8 on chromosome 1 Contains the 5' end of the gene for a novel protein (FLJ33608) and a CpG island, complete sequence Length = 74029 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 ttactacagatccaacaggttaagg 98 ||||||||||||| ||||||||||| Sbjct: 43280 ttactacagatcccacaggttaagg 43304
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 114 cgtgcttgctcgctcaccacaaaga 138 |||||||||||| |||||||||||| Sbjct: 1944774 cgtgcttgctcggtcaccacaaaga 1944750
>gb|AC145366.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0014O08 map near S2137, complete sequence Length = 134033 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gatgccaacagcccaacagt 73 |||||||||||||||||||| Sbjct: 100666 gatgccaacagcccaacagt 100647
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gatgccaacagcccaacagt 73 |||||||||||||||||||| Sbjct: 8689500 gatgccaacagcccaacagt 8689481
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gatgccaacagcccaacagt 73 |||||||||||||||||||| Sbjct: 8760263 gatgccaacagcccaacagt 8760244 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,093,326 Number of Sequences: 3902068 Number of extensions: 1093326 Number of successful extensions: 67805 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67680 Number of HSP's gapped (non-prelim): 125 length of query: 206 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 184 effective length of database: 17,147,199,772 effective search space: 3155084758048 effective search space used: 3155084758048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)