| Clone Name | rbags8b05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468227.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1587 Score = 365 bits (184), Expect = 1e-97 Identities = 381/446 (85%), Gaps = 3/446 (0%) Strand = Plus / Minus Query: 213 ctagaactccctgtctgggaacaggaggggagcaacgagggaccagatgaacaggcctgc 272 |||||| ||||| || ||||| ||||| || || || |||||||| ||| |||| ||||| Sbjct: 1355 ctagaattccctatcggggaagaggagtggggcgacaagggaccaaatgtacagacctgc 1296 Query: 273 tgttgcccactgggtcgcgatcctgacccagacagacggccacccgacatcgacaagcat 332 |||||||||||||| || ||||||||||| || || |||||||| || || |||||| | Sbjct: 1295 cgttgcccactgggttgcaatcctgacccaaacggatggccacccaacgtcaacaagctt 1236 Query: 333 tccgctctccccaaccgaggtcgaccagccagtcaggagcatggcagagtacatgcttgc 392 ||| ||||| ||||| ||||| ||||||||||||| |||||| || |||||||||||||| Sbjct: 1235 tccactctcaccaactgaggttgaccagccagtcaagagcatcgcggagtacatgcttgc 1176 Query: 393 cagggagaagatgaggtggaagaacgagtaggagtatgtcactggcttggccacatcctt 452 || ||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| Sbjct: 1175 caaggagaagatgaggtggaagaacgagtaggagtatgtcactggccttggcacatcctt 1116 Query: 453 ggtttcc---tcctcgtctgccttgctgaaggggagcagtggcttatcggcaccggcgcg 509 ||||| ||||| |||||||| ||||| || ||||||||||| |||||||| || || Sbjct: 1115 cttttccgcttcctcatctgccttactgaaaggaagcagtggcttgtcggcaccagcacg 1056 Query: 510 tggtgagtctggtgctgagagcacagttgcagaagagccagcacgaacagcagagtagac 569 |||||||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||| Sbjct: 1055 tggtgagtctggggctgagagcacagttgcagatgagccagcacggacagccgaatagac 996 Query: 570 cacagaaaggatggtggtgcataatcccaatgtaaggctaccggttgacatagctttgga 629 |||||||||||||||||| ||||||| | ||||||||| || |||| ||||||||| Sbjct: 995 cacagaaaggatggtggttagcaatcccagcgaaaggctaccagtcgacacagctttgga 936 Query: 630 gtgattgtgaagaccgttgcactcat 655 || ||||| || || ||||| |||| Sbjct: 935 atggttgtgcagtccattgcattcat 910
>ref|XM_507542.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1249_F12.26 mRNA Length = 1696 Score = 365 bits (184), Expect = 1e-97 Identities = 381/446 (85%), Gaps = 3/446 (0%) Strand = Plus / Minus Query: 213 ctagaactccctgtctgggaacaggaggggagcaacgagggaccagatgaacaggcctgc 272 |||||| ||||| || ||||| ||||| || || || |||||||| ||| |||| ||||| Sbjct: 1422 ctagaattccctatcggggaagaggagtggggcgacaagggaccaaatgtacagacctgc 1363 Query: 273 tgttgcccactgggtcgcgatcctgacccagacagacggccacccgacatcgacaagcat 332 |||||||||||||| || ||||||||||| || || |||||||| || || |||||| | Sbjct: 1362 cgttgcccactgggttgcaatcctgacccaaacggatggccacccaacgtcaacaagctt 1303 Query: 333 tccgctctccccaaccgaggtcgaccagccagtcaggagcatggcagagtacatgcttgc 392 ||| ||||| ||||| ||||| ||||||||||||| |||||| || |||||||||||||| Sbjct: 1302 tccactctcaccaactgaggttgaccagccagtcaagagcatcgcggagtacatgcttgc 1243 Query: 393 cagggagaagatgaggtggaagaacgagtaggagtatgtcactggcttggccacatcctt 452 || ||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| Sbjct: 1242 caaggagaagatgaggtggaagaacgagtaggagtatgtcactggccttggcacatcctt 1183 Query: 453 ggtttcc---tcctcgtctgccttgctgaaggggagcagtggcttatcggcaccggcgcg 509 ||||| ||||| |||||||| ||||| || ||||||||||| |||||||| || || Sbjct: 1182 cttttccgcttcctcatctgccttactgaaaggaagcagtggcttgtcggcaccagcacg 1123 Query: 510 tggtgagtctggtgctgagagcacagttgcagaagagccagcacgaacagcagagtagac 569 |||||||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||| Sbjct: 1122 tggtgagtctggggctgagagcacagttgcagatgagccagcacggacagccgaatagac 1063 Query: 570 cacagaaaggatggtggtgcataatcccaatgtaaggctaccggttgacatagctttgga 629 |||||||||||||||||| ||||||| | ||||||||| || |||| ||||||||| Sbjct: 1062 cacagaaaggatggtggttagcaatcccagcgaaaggctaccagtcgacacagctttgga 1003 Query: 630 gtgattgtgaagaccgttgcactcat 655 || ||||| || || ||||| |||| Sbjct: 1002 atggttgtgcagtccattgcattcat 977
>ref|XM_507541.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1249_F12.26 mRNA Length = 1696 Score = 365 bits (184), Expect = 1e-97 Identities = 381/446 (85%), Gaps = 3/446 (0%) Strand = Plus / Minus Query: 213 ctagaactccctgtctgggaacaggaggggagcaacgagggaccagatgaacaggcctgc 272 |||||| ||||| || ||||| ||||| || || || |||||||| ||| |||| ||||| Sbjct: 1422 ctagaattccctatcggggaagaggagtggggcgacaagggaccaaatgtacagacctgc 1363 Query: 273 tgttgcccactgggtcgcgatcctgacccagacagacggccacccgacatcgacaagcat 332 |||||||||||||| || ||||||||||| || || |||||||| || || |||||| | Sbjct: 1362 cgttgcccactgggttgcaatcctgacccaaacggatggccacccaacgtcaacaagctt 1303 Query: 333 tccgctctccccaaccgaggtcgaccagccagtcaggagcatggcagagtacatgcttgc 392 ||| ||||| ||||| ||||| ||||||||||||| |||||| || |||||||||||||| Sbjct: 1302 tccactctcaccaactgaggttgaccagccagtcaagagcatcgcggagtacatgcttgc 1243 Query: 393 cagggagaagatgaggtggaagaacgagtaggagtatgtcactggcttggccacatcctt 452 || ||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| Sbjct: 1242 caaggagaagatgaggtggaagaacgagtaggagtatgtcactggccttggcacatcctt 1183 Query: 453 ggtttcc---tcctcgtctgccttgctgaaggggagcagtggcttatcggcaccggcgcg 509 ||||| ||||| |||||||| ||||| || ||||||||||| |||||||| || || Sbjct: 1182 cttttccgcttcctcatctgccttactgaaaggaagcagtggcttgtcggcaccagcacg 1123 Query: 510 tggtgagtctggtgctgagagcacagttgcagaagagccagcacgaacagcagagtagac 569 |||||||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||| Sbjct: 1122 tggtgagtctggggctgagagcacagttgcagatgagccagcacggacagccgaatagac 1063 Query: 570 cacagaaaggatggtggtgcataatcccaatgtaaggctaccggttgacatagctttgga 629 |||||||||||||||||| ||||||| | ||||||||| || |||| ||||||||| Sbjct: 1062 cacagaaaggatggtggttagcaatcccagcgaaaggctaccagtcgacacagctttgga 1003 Query: 630 gtgattgtgaagaccgttgcactcat 655 || ||||| || || ||||| |||| Sbjct: 1002 atggttgtgcagtccattgcattcat 977
>ref|XM_507023.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1249_F12.26 mRNA Length = 1741 Score = 365 bits (184), Expect = 1e-97 Identities = 381/446 (85%), Gaps = 3/446 (0%) Strand = Plus / Minus Query: 213 ctagaactccctgtctgggaacaggaggggagcaacgagggaccagatgaacaggcctgc 272 |||||| ||||| || ||||| ||||| || || || |||||||| ||| |||| ||||| Sbjct: 1437 ctagaattccctatcggggaagaggagtggggcgacaagggaccaaatgtacagacctgc 1378 Query: 273 tgttgcccactgggtcgcgatcctgacccagacagacggccacccgacatcgacaagcat 332 |||||||||||||| || ||||||||||| || || |||||||| || || |||||| | Sbjct: 1377 cgttgcccactgggttgcaatcctgacccaaacggatggccacccaacgtcaacaagctt 1318 Query: 333 tccgctctccccaaccgaggtcgaccagccagtcaggagcatggcagagtacatgcttgc 392 ||| ||||| ||||| ||||| ||||||||||||| |||||| || |||||||||||||| Sbjct: 1317 tccactctcaccaactgaggttgaccagccagtcaagagcatcgcggagtacatgcttgc 1258 Query: 393 cagggagaagatgaggtggaagaacgagtaggagtatgtcactggcttggccacatcctt 452 || ||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| Sbjct: 1257 caaggagaagatgaggtggaagaacgagtaggagtatgtcactggccttggcacatcctt 1198 Query: 453 ggtttcc---tcctcgtctgccttgctgaaggggagcagtggcttatcggcaccggcgcg 509 ||||| ||||| |||||||| ||||| || ||||||||||| |||||||| || || Sbjct: 1197 cttttccgcttcctcatctgccttactgaaaggaagcagtggcttgtcggcaccagcacg 1138 Query: 510 tggtgagtctggtgctgagagcacagttgcagaagagccagcacgaacagcagagtagac 569 |||||||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||| Sbjct: 1137 tggtgagtctggggctgagagcacagttgcagatgagccagcacggacagccgaatagac 1078 Query: 570 cacagaaaggatggtggtgcataatcccaatgtaaggctaccggttgacatagctttgga 629 |||||||||||||||||| ||||||| | ||||||||| || |||| ||||||||| Sbjct: 1077 cacagaaaggatggtggttagcaatcccagcgaaaggctaccagtcgacacagctttgga 1018 Query: 630 gtgattgtgaagaccgttgcactcat 655 || ||||| || || ||||| |||| Sbjct: 1017 atggttgtgcagtccattgcattcat 992
>dbj|AK119191.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-H03, full insert sequence Length = 1587 Score = 365 bits (184), Expect = 1e-97 Identities = 381/446 (85%), Gaps = 3/446 (0%) Strand = Plus / Minus Query: 213 ctagaactccctgtctgggaacaggaggggagcaacgagggaccagatgaacaggcctgc 272 |||||| ||||| || ||||| ||||| || || || |||||||| ||| |||| ||||| Sbjct: 1355 ctagaattccctatcggggaagaggagtggggcgacaagggaccaaatgtacagacctgc 1296 Query: 273 tgttgcccactgggtcgcgatcctgacccagacagacggccacccgacatcgacaagcat 332 |||||||||||||| || ||||||||||| || || |||||||| || || |||||| | Sbjct: 1295 cgttgcccactgggttgcaatcctgacccaaacggatggccacccaacgtcaacaagctt 1236 Query: 333 tccgctctccccaaccgaggtcgaccagccagtcaggagcatggcagagtacatgcttgc 392 ||| ||||| ||||| ||||| ||||||||||||| |||||| || |||||||||||||| Sbjct: 1235 tccactctcaccaactgaggttgaccagccagtcaagagcatcgcggagtacatgcttgc 1176 Query: 393 cagggagaagatgaggtggaagaacgagtaggagtatgtcactggcttggccacatcctt 452 || ||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| Sbjct: 1175 caaggagaagatgaggtggaagaacgagtaggagtatgtcactggccttggcacatcctt 1116 Query: 453 ggtttcc---tcctcgtctgccttgctgaaggggagcagtggcttatcggcaccggcgcg 509 ||||| ||||| |||||||| ||||| || ||||||||||| |||||||| || || Sbjct: 1115 cttttccgcttcctcatctgccttactgaaaggaagcagtggcttgtcggcaccagcacg 1056 Query: 510 tggtgagtctggtgctgagagcacagttgcagaagagccagcacgaacagcagagtagac 569 |||||||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||| Sbjct: 1055 tggtgagtctggggctgagagcacagttgcagatgagccagcacggacagccgaatagac 996 Query: 570 cacagaaaggatggtggtgcataatcccaatgtaaggctaccggttgacatagctttgga 629 |||||||||||||||||| ||||||| | ||||||||| || |||| ||||||||| Sbjct: 995 cacagaaaggatggtggttagcaatcccagcgaaaggctaccagtcgacacagctttgga 936 Query: 630 gtgattgtgaagaccgttgcactcat 655 || ||||| || || ||||| |||| Sbjct: 935 atggttgtgcagtccattgcattcat 910
>dbj|AK106174.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C06, full insert sequence Length = 1696 Score = 365 bits (184), Expect = 1e-97 Identities = 381/446 (85%), Gaps = 3/446 (0%) Strand = Plus / Minus Query: 213 ctagaactccctgtctgggaacaggaggggagcaacgagggaccagatgaacaggcctgc 272 |||||| ||||| || ||||| ||||| || || || |||||||| ||| |||| ||||| Sbjct: 1422 ctagaattccctatcggggaagaggagtggggcgacaagggaccaaatgtacagacctgc 1363 Query: 273 tgttgcccactgggtcgcgatcctgacccagacagacggccacccgacatcgacaagcat 332 |||||||||||||| || ||||||||||| || || |||||||| || || |||||| | Sbjct: 1362 cgttgcccactgggttgcaatcctgacccaaacggatggccacccaacgtcaacaagctt 1303 Query: 333 tccgctctccccaaccgaggtcgaccagccagtcaggagcatggcagagtacatgcttgc 392 ||| ||||| ||||| ||||| ||||||||||||| |||||| || |||||||||||||| Sbjct: 1302 tccactctcaccaactgaggttgaccagccagtcaagagcatcgcggagtacatgcttgc 1243 Query: 393 cagggagaagatgaggtggaagaacgagtaggagtatgtcactggcttggccacatcctt 452 || ||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| Sbjct: 1242 caaggagaagatgaggtggaagaacgagtaggagtatgtcactggccttggcacatcctt 1183 Query: 453 ggtttcc---tcctcgtctgccttgctgaaggggagcagtggcttatcggcaccggcgcg 509 ||||| ||||| |||||||| ||||| || ||||||||||| |||||||| || || Sbjct: 1182 cttttccgcttcctcatctgccttactgaaaggaagcagtggcttgtcggcaccagcacg 1123 Query: 510 tggtgagtctggtgctgagagcacagttgcagaagagccagcacgaacagcagagtagac 569 |||||||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||| Sbjct: 1122 tggtgagtctggggctgagagcacagttgcagatgagccagcacggacagccgaatagac 1063 Query: 570 cacagaaaggatggtggtgcataatcccaatgtaaggctaccggttgacatagctttgga 629 |||||||||||||||||| ||||||| | ||||||||| || |||| ||||||||| Sbjct: 1062 cacagaaaggatggtggttagcaatcccagcgaaaggctaccagtcgacacagctttgga 1003 Query: 630 gtgattgtgaagaccgttgcactcat 655 || ||||| || || ||||| |||| Sbjct: 1002 atggttgtgcagtccattgcattcat 977
>dbj|AK104731.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C07, full insert sequence Length = 1696 Score = 365 bits (184), Expect = 1e-97 Identities = 381/446 (85%), Gaps = 3/446 (0%) Strand = Plus / Minus Query: 213 ctagaactccctgtctgggaacaggaggggagcaacgagggaccagatgaacaggcctgc 272 |||||| ||||| || ||||| ||||| || || || |||||||| ||| |||| ||||| Sbjct: 1422 ctagaattccctatcggggaagaggagtggggcgacaagggaccaaatgtacagacctgc 1363 Query: 273 tgttgcccactgggtcgcgatcctgacccagacagacggccacccgacatcgacaagcat 332 |||||||||||||| || ||||||||||| || || |||||||| || || |||||| | Sbjct: 1362 cgttgcccactgggttgcaatcctgacccaaacggatggccacccaacgtcaacaagctt 1303 Query: 333 tccgctctccccaaccgaggtcgaccagccagtcaggagcatggcagagtacatgcttgc 392 ||| ||||| ||||| ||||| ||||||||||||| |||||| || |||||||||||||| Sbjct: 1302 tccactctcaccaactgaggttgaccagccagtcaagagcatcgcggagtacatgcttgc 1243 Query: 393 cagggagaagatgaggtggaagaacgagtaggagtatgtcactggcttggccacatcctt 452 || ||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| Sbjct: 1242 caaggagaagatgaggtggaagaacgagtaggagtatgtcactggccttggcacatcctt 1183 Query: 453 ggtttcc---tcctcgtctgccttgctgaaggggagcagtggcttatcggcaccggcgcg 509 ||||| ||||| |||||||| ||||| || ||||||||||| |||||||| || || Sbjct: 1182 cttttccgcttcctcatctgccttactgaaaggaagcagtggcttgtcggcaccagcacg 1123 Query: 510 tggtgagtctggtgctgagagcacagttgcagaagagccagcacgaacagcagagtagac 569 |||||||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||| Sbjct: 1122 tggtgagtctggggctgagagcacagttgcagatgagccagcacggacagccgaatagac 1063 Query: 570 cacagaaaggatggtggtgcataatcccaatgtaaggctaccggttgacatagctttgga 629 |||||||||||||||||| ||||||| | ||||||||| || |||| ||||||||| Sbjct: 1062 cacagaaaggatggtggttagcaatcccagcgaaaggctaccagtcgacacagctttgga 1003 Query: 630 gtgattgtgaagaccgttgcactcat 655 || ||||| || || ||||| |||| Sbjct: 1002 atggttgtgcagtccattgcattcat 977
>dbj|AK068367.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147C17, full insert sequence Length = 1742 Score = 365 bits (184), Expect = 1e-97 Identities = 381/446 (85%), Gaps = 3/446 (0%) Strand = Plus / Minus Query: 213 ctagaactccctgtctgggaacaggaggggagcaacgagggaccagatgaacaggcctgc 272 |||||| ||||| || ||||| ||||| || || || |||||||| ||| |||| ||||| Sbjct: 1437 ctagaattccctatcggggaagaggagtggggcgacaagggaccaaatgtacagacctgc 1378 Query: 273 tgttgcccactgggtcgcgatcctgacccagacagacggccacccgacatcgacaagcat 332 |||||||||||||| || ||||||||||| || || |||||||| || || |||||| | Sbjct: 1377 cgttgcccactgggttgcaatcctgacccaaacggatggccacccaacgtcaacaagctt 1318 Query: 333 tccgctctccccaaccgaggtcgaccagccagtcaggagcatggcagagtacatgcttgc 392 ||| ||||| ||||| ||||| ||||||||||||| |||||| || |||||||||||||| Sbjct: 1317 tccactctcaccaactgaggttgaccagccagtcaagagcatcgcggagtacatgcttgc 1258 Query: 393 cagggagaagatgaggtggaagaacgagtaggagtatgtcactggcttggccacatcctt 452 || ||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| Sbjct: 1257 caaggagaagatgaggtggaagaacgagtaggagtatgtcactggccttggcacatcctt 1198 Query: 453 ggtttcc---tcctcgtctgccttgctgaaggggagcagtggcttatcggcaccggcgcg 509 ||||| ||||| |||||||| ||||| || ||||||||||| |||||||| || || Sbjct: 1197 cttttccgcttcctcatctgccttactgaaaggaagcagtggcttgtcggcaccagcacg 1138 Query: 510 tggtgagtctggtgctgagagcacagttgcagaagagccagcacgaacagcagagtagac 569 |||||||||||| |||||||||||||||||||| ||||||||||| ||||| || ||||| Sbjct: 1137 tggtgagtctggggctgagagcacagttgcagatgagccagcacggacagccgaatagac 1078 Query: 570 cacagaaaggatggtggtgcataatcccaatgtaaggctaccggttgacatagctttgga 629 |||||||||||||||||| ||||||| | ||||||||| || |||| ||||||||| Sbjct: 1077 cacagaaaggatggtggttagcaatcccagcgaaaggctaccagtcgacacagctttgga 1018 Query: 630 gtgattgtgaagaccgttgcactcat 655 || ||||| || || ||||| |||| Sbjct: 1017 atggttgtgcagtccattgcattcat 992
>gb|AY105120.1| Zea mays PCO133097 mRNA sequence Length = 1778 Score = 333 bits (168), Expect = 4e-88 Identities = 373/440 (84%), Gaps = 6/440 (1%) Strand = Plus / Minus Query: 214 tagaactccctgtctgggaacaggaggggagcaacgagggaccagatgaacaggcctgct 273 ||||| |||||||| || || |||| ||| ||||| || ||||| |||||||| ||||| Sbjct: 1466 tagaattccctgtcgggaaagaggacgggtgcaacaagcgaccatatgaacagacctgcc 1407 Query: 274 gttgcccactgggtcgcgatcctgacccagacagacggccacccgacatcgacaagcatt 333 || ||||||||||| || ||||||||||||||||| |||||||| ||||| |||||| || Sbjct: 1406 gtcgcccactgggttgcaatcctgacccagacagatggccacccaacatccacaagcttt 1347 Query: 334 ccgctctccccaaccgaggtcgaccagccagtcaggagcatggcagagtacatgcttgcc 393 |||||||| |||||||| || ||||||||||||| |||||| || ||||||||||| ||| Sbjct: 1346 ccgctctcaccaaccgaagttgaccagccagtcaagagcattgccgagtacatgctggcc 1287 Query: 394 agggagaagatgaggtggaagaacgagtaggagtatgtcactggcttggccacatccttg 453 ||||||||||||||||| ||||| ||||||||||||||||| ||| | | ||||||||| Sbjct: 1286 agggagaagatgaggtgaaagaaagagtaggagtatgtcaccggcctcggcacatccttc 1227 Query: 454 gt---ttcctcctcgtctgccttgctgaaggggagcagtggcttatcggcaccggcgcgt 510 | ||| | |||||||||||||||||||| |||| |||||| |||| | | ||| Sbjct: 1226 ttatcttcttgttcgtctgccttgctgaagggaagcaatggcttgtcggtcc---cacgt 1170 Query: 511 ggtgagtctggtgctgagagcacagttgcagaagagccagcacgaacagcagagtagacc 570 ||||||||||||| ||||||||||||||||| |||||||| || |||||||| |||||| Sbjct: 1169 ggtgagtctggtggcgagagcacagttgcagaggagccagcgcggacagcagaatagacc 1110 Query: 571 acagaaaggatggtggtgcataatcccaatgtaaggctaccggttgacatagctttggag 630 ||||| |||| ||||| | |||||||||||||||||| ||||||| |||||| ||| Sbjct: 1109 acagagaggaccgtggtaaggagtcccaatgtaaggctaccagttgacacagcttttgag 1050 Query: 631 tgattgtgaagaccgttgca 650 ||||||||||| || ||||| Sbjct: 1049 tgattgtgaagcccattgca 1030
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 246 bits (124), Expect = 8e-62 Identities = 252/294 (85%), Gaps = 3/294 (1%) Strand = Plus / Plus Query: 213 ctagaactccctgtctgggaacaggaggggagcaacgagggaccagatgaacaggcctgc 272 |||||| ||||| || ||||| ||||| || || || |||||||| ||| |||| ||||| Sbjct: 33709588 ctagaattccctatcggggaagaggagtggggcgacaagggaccaaatgtacagacctgc 33709647 Query: 273 tgttgcccactgggtcgcgatcctgacccagacagacggccacccgacatcgacaagcat 332 |||||||||||||| || ||||||||||| || || |||||||| || || |||||| | Sbjct: 33709648 cgttgcccactgggttgcaatcctgacccaaacggatggccacccaacgtcaacaagctt 33709707 Query: 333 tccgctctccccaaccgaggtcgaccagccagtcaggagcatggcagagtacatgcttgc 392 ||| ||||| ||||| ||||| ||||||||||||| |||||| || |||||||||||||| Sbjct: 33709708 tccactctcaccaactgaggttgaccagccagtcaagagcatcgcggagtacatgcttgc 33709767 Query: 393 cagggagaagatgaggtggaagaacgagtaggagtatgtcactggcttggccacatcctt 452 || ||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| Sbjct: 33709768 caaggagaagatgaggtggaagaacgagtaggagtatgtcactggccttggcacatcctt 33709827 Query: 453 ggtttcc---tcctcgtctgccttgctgaaggggagcagtggcttatcggcacc 503 ||||| ||||| |||||||| ||||| || ||||||||||| |||||||| Sbjct: 33709828 cttttccgcttcctcatctgccttactgaaaggaagcagtggcttgtcggcacc 33709881 Score = 127 bits (64), Expect = 5e-26 Identities = 127/148 (85%) Strand = Plus / Plus Query: 508 cgtggtgagtctggtgctgagagcacagttgcagaagagccagcacgaacagcagagtag 567 |||||||||||||| |||||||||||||||||||| ||||||||||| ||||| || ||| Sbjct: 33709965 cgtggtgagtctggggctgagagcacagttgcagatgagccagcacggacagccgaatag 33710024 Query: 568 accacagaaaggatggtggtgcataatcccaatgtaaggctaccggttgacatagctttg 627 |||||||||||||||||||| ||||||| | ||||||||| || |||| ||||||| Sbjct: 33710025 accacagaaaggatggtggttagcaatcccagcgaaaggctaccagtcgacacagctttg 33710084 Query: 628 gagtgattgtgaagaccgttgcactcat 655 || || ||||| || || ||||| |||| Sbjct: 33710085 gaatggttgtgcagtccattgcattcat 33710112
>dbj|AP004054.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1249_F12 Length = 133205 Score = 246 bits (124), Expect = 8e-62 Identities = 252/294 (85%), Gaps = 3/294 (1%) Strand = Plus / Plus Query: 213 ctagaactccctgtctgggaacaggaggggagcaacgagggaccagatgaacaggcctgc 272 |||||| ||||| || ||||| ||||| || || || |||||||| ||| |||| ||||| Sbjct: 77995 ctagaattccctatcggggaagaggagtggggcgacaagggaccaaatgtacagacctgc 78054 Query: 273 tgttgcccactgggtcgcgatcctgacccagacagacggccacccgacatcgacaagcat 332 |||||||||||||| || ||||||||||| || || |||||||| || || |||||| | Sbjct: 78055 cgttgcccactgggttgcaatcctgacccaaacggatggccacccaacgtcaacaagctt 78114 Query: 333 tccgctctccccaaccgaggtcgaccagccagtcaggagcatggcagagtacatgcttgc 392 ||| ||||| ||||| ||||| ||||||||||||| |||||| || |||||||||||||| Sbjct: 78115 tccactctcaccaactgaggttgaccagccagtcaagagcatcgcggagtacatgcttgc 78174 Query: 393 cagggagaagatgaggtggaagaacgagtaggagtatgtcactggcttggccacatcctt 452 || ||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| Sbjct: 78175 caaggagaagatgaggtggaagaacgagtaggagtatgtcactggccttggcacatcctt 78234 Query: 453 ggtttcc---tcctcgtctgccttgctgaaggggagcagtggcttatcggcacc 503 ||||| ||||| |||||||| ||||| || ||||||||||| |||||||| Sbjct: 78235 cttttccgcttcctcatctgccttactgaaaggaagcagtggcttgtcggcacc 78288 Score = 127 bits (64), Expect = 5e-26 Identities = 127/148 (85%) Strand = Plus / Plus Query: 508 cgtggtgagtctggtgctgagagcacagttgcagaagagccagcacgaacagcagagtag 567 |||||||||||||| |||||||||||||||||||| ||||||||||| ||||| || ||| Sbjct: 78372 cgtggtgagtctggggctgagagcacagttgcagatgagccagcacggacagccgaatag 78431 Query: 568 accacagaaaggatggtggtgcataatcccaatgtaaggctaccggttgacatagctttg 627 |||||||||||||||||||| ||||||| | ||||||||| || |||| ||||||| Sbjct: 78432 accacagaaaggatggtggttagcaatcccagcgaaaggctaccagtcgacacagctttg 78491 Query: 628 gagtgattgtgaagaccgttgcactcat 655 || || ||||| || || ||||| |||| Sbjct: 78492 gaatggttgtgcagtccattgcattcat 78519
>dbj|AP005115.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0700F06 Length = 139277 Score = 246 bits (124), Expect = 8e-62 Identities = 252/294 (85%), Gaps = 3/294 (1%) Strand = Plus / Plus Query: 213 ctagaactccctgtctgggaacaggaggggagcaacgagggaccagatgaacaggcctgc 272 |||||| ||||| || ||||| ||||| || || || |||||||| ||| |||| ||||| Sbjct: 40455 ctagaattccctatcggggaagaggagtggggcgacaagggaccaaatgtacagacctgc 40514 Query: 273 tgttgcccactgggtcgcgatcctgacccagacagacggccacccgacatcgacaagcat 332 |||||||||||||| || ||||||||||| || || |||||||| || || |||||| | Sbjct: 40515 cgttgcccactgggttgcaatcctgacccaaacggatggccacccaacgtcaacaagctt 40574 Query: 333 tccgctctccccaaccgaggtcgaccagccagtcaggagcatggcagagtacatgcttgc 392 ||| ||||| ||||| ||||| ||||||||||||| |||||| || |||||||||||||| Sbjct: 40575 tccactctcaccaactgaggttgaccagccagtcaagagcatcgcggagtacatgcttgc 40634 Query: 393 cagggagaagatgaggtggaagaacgagtaggagtatgtcactggcttggccacatcctt 452 || ||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| Sbjct: 40635 caaggagaagatgaggtggaagaacgagtaggagtatgtcactggccttggcacatcctt 40694 Query: 453 ggtttcc---tcctcgtctgccttgctgaaggggagcagtggcttatcggcacc 503 ||||| ||||| |||||||| ||||| || ||||||||||| |||||||| Sbjct: 40695 cttttccgcttcctcatctgccttactgaaaggaagcagtggcttgtcggcacc 40748 Score = 127 bits (64), Expect = 5e-26 Identities = 127/148 (85%) Strand = Plus / Plus Query: 508 cgtggtgagtctggtgctgagagcacagttgcagaagagccagcacgaacagcagagtag 567 |||||||||||||| |||||||||||||||||||| ||||||||||| ||||| || ||| Sbjct: 40832 cgtggtgagtctggggctgagagcacagttgcagatgagccagcacggacagccgaatag 40891 Query: 568 accacagaaaggatggtggtgcataatcccaatgtaaggctaccggttgacatagctttg 627 |||||||||||||||||||| ||||||| | ||||||||| || |||| ||||||| Sbjct: 40892 accacagaaaggatggtggttagcaatcccagcgaaaggctaccagtcgacacagctttg 40951 Query: 628 gagtgattgtgaagaccgttgcactcat 655 || || ||||| || || ||||| |||| Sbjct: 40952 gaatggttgtgcagtccattgcattcat 40979
>gb|AY596540.1| Saccharum officinarum clone SCCCLR2001D07, complete sequence Length = 1804 Score = 224 bits (113), Expect = 3e-55 Identities = 194/221 (87%) Strand = Plus / Minus Query: 208 ttgacctagaactccctgtctgggaacaggaggggagcaacgagggaccagatgaacagg 267 |||| |||||| |||||||| ||||| |||| ||| ||||| || ||||| |||||||| Sbjct: 1423 ttgatctagaattccctgtcggggaagaggatgggtgcaacaagcgaccatatgaacaga 1364 Query: 268 cctgctgttgcccactgggtcgcgatcctgacccagacagacggccacccgacatcgaca 327 ||||| || ||||||||||| || ||||||||||||||||| |||||||| ||||| ||| Sbjct: 1363 cctgccgtcgcccactgggttgcaatcctgacccagacagatggccacccaacatcaaca 1304 Query: 328 agcattccgctctccccaaccgaggtcgaccagccagtcaggagcatggcagagtacatg 387 ||| |||||||||| ||||| || || ||||||||||||| |||||| || ||||||||| Sbjct: 1303 agctttccgctctcaccaacggaagttgaccagccagtcaagagcattgccgagtacatg 1244 Query: 388 cttgccagggagaagatgaggtggaagaacgagtaggagta 428 || |||||||||||||||||||||||||| ||||||||||| Sbjct: 1243 ctggccagggagaagatgaggtggaagaaagagtaggagta 1203 Score = 159 bits (80), Expect = 1e-35 Identities = 163/190 (85%), Gaps = 3/190 (1%) Strand = Plus / Minus Query: 466 tctgccttgctgaaggggagcagtggcttatcggcaccggcgcgtggtgagtctggtgct 525 ||||||||||||||||| |||| |||||| |||| || || |||||||||||||| Sbjct: 1162 tctgccttgctgaagggaagcaatggcttgtcggtccca---cgaggtgagtctggtgcc 1106 Query: 526 gagagcacagttgcagaagagccagcacgaacagcagagtagaccacagaaaggatggtg 585 ||||||||||||||||| |||||||| || |||||||||||||||||||| |||| ||| Sbjct: 1105 gagagcacagttgcagaggagccagcgcggacagcagagtagaccacagagaggaccgtg 1046 Query: 586 gtgcataatcccaatgtaaggctaccggttgacatagctttggagtgattgtgaagaccg 645 || | |||||||||||||||||| ||||||| |||||| ||||||||||||||||| Sbjct: 1045 gtaaggagtcccaatgtaaggctaccagttgacacagctttcgagtgattgtgaagacca 986 Query: 646 ttgcactcat 655 ||||| |||| Sbjct: 985 ttgcattcat 976
>gb|BT014207.1| Lycopersicon esculentum clone 133384F, mRNA sequence Length = 1582 Score = 99.6 bits (50), Expect = 1e-17 Identities = 182/226 (80%) Strand = Plus / Minus Query: 215 agaactccctgtctgggaacaggaggggagcaacgagggaccagatgaacaggcctgctg 274 ||||||| ||||| |||||||| | |||||||| | ||||||||||||| |||| | Sbjct: 1373 agaactctctgtccgggaacagaattggagcaacctgagaccagatgaacaaagctgcag 1314 Query: 275 ttgcccactgggtcgcgatcctgacccagacagacggccacccgacatcgacaagcattc 334 |||||||| ||| ||||||||||||||||||| |||||||| || || || | ||| Sbjct: 1313 ttgcccacccagtcacgatcctgacccagacagatggccacccaacgtccactaattttc 1254 Query: 335 cgctctccccaaccgaggtcgaccagccagtcaggagcatggcagagtacatgcttgcca 394 | |||||||| || ||||| ||||| || || || ||||| || |||||||| || || | Sbjct: 1253 cactctcccccacagaggttgaccaacccgtaagaagcattgccgagtacatactagcga 1194 Query: 395 gggagaagatgaggtggaagaacgagtaggagtatgtcactggctt 440 | || ||||| ||||||||||| || |||||||||| |||||||| Sbjct: 1193 gagaaaagataaggtggaagaaagaataggagtatgagactggctt 1148 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 540 agaagagccagcacgaacagcagagtagaccacaga 575 |||||||||||| ||||||||||||||||| ||||| Sbjct: 1048 agaagagccagcgcgaacagcagagtagacaacaga 1013
>ref|NM_101485.2| Arabidopsis thaliana unknown protein AT1G16180 mRNA, complete cds Length = 1471 Score = 95.6 bits (48), Expect = 2e-16 Identities = 174/216 (80%) Strand = Plus / Minus Query: 215 agaactccctgtctgggaacaggaggggagcaacgagggaccagatgaacaggcctgctg 274 ||||||| | ||| ||||| || | ||||||||| |||||||||||||| || || || | Sbjct: 1237 agaactcacggtcggggaagagaatgggagcaacaagggaccagatgaagagaccagcag 1178 Query: 275 ttgcccactgggtcgcgatcctgacccagacagacggccacccgacatcgacaagcattc 334 | ||||| |||| | | | |||||| || || |||||||||||||| || ||| | | Sbjct: 1177 tggcccagctggtcacaacacggacccacactgaaggccacccgacatccaccagcttac 1118 Query: 335 cgctctccccaaccgaggtcgaccagccagtcaggagcatggcagagtacatgcttgcca 394 | || || ||||| || || |||||||| || |||||||| |||||||||||||| || | Sbjct: 1117 cactttcaccaactgaagttgaccagccggttaggagcattgcagagtacatgctcgcaa 1058 Query: 395 gggagaagatgaggtggaagaacgagtaggagtatg 430 |||||||||||| ||||||||| | ||| ||||||| Sbjct: 1057 gggagaagatgatgtggaagaatgcgtatgagtatg 1022 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 621 agctttggagtgattgtgaagaccgttgcactc 653 |||||| ||||||||||| ||||| |||||||| Sbjct: 834 agctttagagtgattgtggagaccattgcactc 802
>gb|AC010924.2|T24D18 Arabidopsis thaliana chromosome 1 BAC T24D18 sequence, complete sequence Length = 80442 Score = 95.6 bits (48), Expect = 2e-16 Identities = 174/216 (80%) Strand = Plus / Minus Query: 215 agaactccctgtctgggaacaggaggggagcaacgagggaccagatgaacaggcctgctg 274 ||||||| | ||| ||||| || | ||||||||| |||||||||||||| || || || | Sbjct: 77919 agaactcacggtcggggaagagaatgggagcaacaagggaccagatgaagagaccagcag 77860 Query: 275 ttgcccactgggtcgcgatcctgacccagacagacggccacccgacatcgacaagcattc 334 | ||||| |||| | | | |||||| || || |||||||||||||| || ||| | | Sbjct: 77859 tggcccagctggtcacaacacggacccacactgaaggccacccgacatccaccagcttac 77800 Query: 335 cgctctccccaaccgaggtcgaccagccagtcaggagcatggcagagtacatgcttgcca 394 | || || ||||| || || |||||||| || |||||||| |||||||||||||| || | Sbjct: 77799 cactttcaccaactgaagttgaccagccggttaggagcattgcagagtacatgctcgcaa 77740 Query: 395 gggagaagatgaggtggaagaacgagtaggagtatg 430 |||||||||||| ||||||||| | ||| ||||||| Sbjct: 77739 gggagaagatgatgtggaagaatgcgtatgagtatg 77704 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 621 agctttggagtgattgtgaagaccgttgcactc 653 |||||| ||||||||||| ||||| |||||||| Sbjct: 77321 agctttagagtgattgtggagaccattgcactc 77289
>dbj|AK221101.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-88-C14 Length = 391 Score = 91.7 bits (46), Expect = 3e-15 Identities = 163/202 (80%) Strand = Plus / Minus Query: 215 agaactccctgtctgggaacaggaggggagcaacgagggaccagatgaacaggcctgctg 274 ||||||| | ||| ||||| || | ||||||||| |||||||||||||| || || || | Sbjct: 208 agaactcacggtcggggaagagaatgggagcaacaagggaccagatgaagagaccagcag 149 Query: 275 ttgcccactgggtcgcgatcctgacccagacagacggccacccgacatcgacaagcattc 334 | ||||| |||| | | | |||||| || || |||||||||||||| || ||| | | Sbjct: 148 tggcccagctggtcacaacacggacccacactgaaggccacccgacatccaccagcttac 89 Query: 335 cgctctccccaaccgaggtcgaccagccagtcaggagcatggcagagtacatgcttgcca 394 | || || ||||| || || |||||||| || |||||||| |||||||||||||| || | Sbjct: 88 cactttcaccaactgaagttgaccagccggttaggagcattgcagagtacatgctcgcaa 29 Query: 395 gggagaagatgaggtggaagaa 416 |||||||||||| ||||||||| Sbjct: 28 gggagaagatgatgtggaagaa 7
>gb|AY108795.1| Zea mays PCO062914 mRNA sequence Length = 1100 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 357 ccagccagtcaggagcatggcagagtacatgcttgccagggagaagatgaggtggaagaa 416 |||||| |||||||||||||| || ||||||||||| |||| |||||||||||||||||| Sbjct: 590 ccagccggtcaggagcatggctgaatacatgcttgcaagggcgaagatgaggtggaagaa 531 Query: 417 cgagtaggagta 428 | ||||||||| Sbjct: 530 ggtgtaggagta 519
>gb|AC169374.2| Sorghum bicolor clone SB_BBc0019I06, complete sequence Length = 129695 Score = 81.8 bits (41), Expect = 3e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 357 ccagccagtcaggagcatggcagagtacatgcttgccagggagaagatgaggtggaagaa 416 ||||||||||| ||||||||| || ||||||||||| |||| |||||||||||||||||| Sbjct: 47740 ccagccagtcaagagcatggctgaatacatgcttgcaagggcgaagatgaggtggaagaa 47799 Query: 417 cgagtagga 425 | |||||| Sbjct: 47800 ggtgtagga 47808
>gb|BT018419.1| Zea mays clone EL01N0357G10.d mRNA sequence Length = 1376 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 357 ccagccagtcaggagcatggcagagtacatgcttgccagggagaagatgaggtggaagaa 416 |||||| |||||||||||||| || ||||||||||| |||| |||||||||| ||||||| Sbjct: 1083 ccagccggtcaggagcatggctgaatacatgcttgcaagggcgaagatgagggggaagaa 1024 Query: 417 cgagtaggagta 428 | ||||||||| Sbjct: 1023 ggtgtaggagta 1012
>ref|XM_468965.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1254 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 541 gaagagccagcacgaacagcagagtagaccacaga 575 ||||| |||||||||||||||||||| || ||||| Sbjct: 914 gaagatccagcacgaacagcagagtacacgacaga 880 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 357 ccagccagtcaggagcatggcagagtacatgcttgc 392 |||||||||||| |||||||| || ||||| ||||| Sbjct: 1107 ccagccagtcagaagcatggctgaatacatacttgc 1072
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 541 gaagagccagcacgaacagcagagtagaccacaga 575 ||||| |||||||||||||||||||| || ||||| Sbjct: 19331236 gaagatccagcacgaacagcagagtacacgacaga 19331270 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 357 ccagccagtcaggagcatggcagagtacatgcttgc 392 |||||||||||| |||||||| || ||||| ||||| Sbjct: 19330964 ccagccagtcagaagcatggctgaatacatacttgc 19330999
>gb|AC118141.4| Homo sapiens BAC clone RP11-610O8 from 4, complete sequence Length = 80438 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 439 ttggccacatccttggtttcctc 461 ||||||||||||||||||||||| Sbjct: 17967 ttggccacatccttggtttcctc 17989
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 541 gaagagccagcacgaacagcagagtagaccacaga 575 ||||| |||||||||||||||||||| || ||||| Sbjct: 19325277 gaagatccagcacgaacagcagagtacacgacaga 19325311 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 357 ccagccagtcaggagcatggcagagtacatgcttgc 392 |||||||||||| |||||||| || ||||| ||||| Sbjct: 19325005 ccagccagtcagaagcatggctgaatacatacttgc 19325040
>gb|AC137925.2| Oryza sativa chromosome 3 BAC OSJNBb0047D08 genomic sequence, complete sequence Length = 140507 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 541 gaagagccagcacgaacagcagagtagaccacaga 575 ||||| |||||||||||||||||||| || ||||| Sbjct: 115397 gaagatccagcacgaacagcagagtacacgacaga 115431 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 357 ccagccagtcaggagcatggcagagtacatgcttgc 392 |||||||||||| |||||||| || ||||| ||||| Sbjct: 115125 ccagccagtcagaagcatggctgaatacatacttgc 115160
>dbj|AK067011.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093K20, full insert sequence Length = 1494 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 541 gaagagccagcacgaacagcagagtagaccacaga 575 ||||| |||||||||||||||||||| || ||||| Sbjct: 953 gaagatccagcacgaacagcagagtacacgacaga 919 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 357 ccagccagtcaggagcatggcagagtacatgcttgc 392 |||||||||||| |||||||| || ||||| ||||| Sbjct: 1146 ccagccagtcagaagcatggctgaatacatacttgc 1111
>emb|AL732547.8| Mouse DNA sequence from clone RP23-24E11 on chromosome 4, complete sequence Length = 206741 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 185 ctcttagcaggtaggtaaccaggttga 211 |||||||| |||||||||||||||||| Sbjct: 116387 ctcttagctggtaggtaaccaggttga 116361
>emb|AL158850.8| Human DNA sequence from clone RP3-522B19 on chromosome 6 Contains part of a novel gene, the 3' end of the gene for novel protein DKFZp451A175 (similar to M. musculus muscle-derived protein MDP77) and part of a novel gene, complete sequence Length = 91351 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 94 aatattacagaccagatacagatagt 119 ||||| |||||||||||||||||||| Sbjct: 1066 aatatcacagaccagatacagatagt 1041
>emb|AL807811.9| Mouse DNA sequence from clone RP23-247I1 on chromosome 4, complete sequence Length = 249021 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 266 ggcctgctgttgcccactgggt 287 |||||||||||||||||||||| Sbjct: 166856 ggcctgctgttgcccactgggt 166835
>gb|AC108413.4| Mus musculus chromosome 8, clone RP23-472M11, complete sequence Length = 174540 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 ggagcatggcagagtacatgc 388 ||||||||||||||||||||| Sbjct: 129265 ggagcatggcagagtacatgc 129245
>gb|AC159285.3| Mus musculus BAC clone RP23-306M13 from chromosome 8, complete sequence Length = 231778 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 466 tctgccttgctgaaggggagc 486 ||||||||||||||||||||| Sbjct: 118059 tctgccttgctgaaggggagc 118039
>gb|AC100893.13| Mus musculus chromosome 8, clone RP23-68I8, complete sequence Length = 253420 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 tctgccttgctgaaggggagc 486 ||||||||||||||||||||| Sbjct: 247795 tctgccttgctgaaggggagc 247815
>gb|BC046124.1| Homo sapiens hepatitis B virus x associated protein, mRNA (cDNA clone IMAGE:4384806), partial cds Length = 2417 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 396 ggagaagatgaggtggaagaa 416 ||||||||||||||||||||| Sbjct: 1810 ggagaagatgaggtggaagaa 1830
>gb|AF227948.2| Homo sapiens HBV pX associated protein-8 mRNA, complete cds Length = 5323 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 396 ggagaagatgaggtggaagaa 416 ||||||||||||||||||||| Sbjct: 2712 ggagaagatgaggtggaagaa 2732
>emb|AL691515.9| Human DNA sequence from clone RP11-316I3 on chromosome 1 Contains two novel genes, complete sequence Length = 199421 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 ggccacatccttggtttcctc 461 ||||||||||||||||||||| Sbjct: 7019 ggccacatccttggtttcctc 7039
>emb|AL390067.19| Human DNA sequence from clone RP11-276E15 on chromosome 9 Contains the 3' end of a novel gene, gene HSPC043, the 5' end of the gene for a novel protein similar to sorting nexin 7 (SNX7), a novel gene and two CpG islands, complete sequence Length = 114178 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 gcttggccacatccttggttt 457 ||||||||||||||||||||| Sbjct: 88504 gcttggccacatccttggttt 88524
>gb|AC009757.8| Homo sapiens chromosome 5, clone RP11-37M16, complete sequence Length = 166918 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 437 gcttggccacatccttggttt 457 ||||||||||||||||||||| Sbjct: 46378 gcttggccacatccttggttt 46358
>dbj|AK001268.1| Homo sapiens cDNA FLJ10406 fis, clone NT2RM4000515 Length = 1747 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 396 ggagaagatgaggtggaagaa 416 ||||||||||||||||||||| Sbjct: 949 ggagaagatgaggtggaagaa 969
>ref|NM_016578.3| Homo sapiens hepatitis B virus x associated protein (HBXAP), mRNA Length = 5138 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 396 ggagaagatgaggtggaagaa 416 ||||||||||||||||||||| Sbjct: 2527 ggagaagatgaggtggaagaa 2547
>gb|AC026792.5| Homo sapiens chromosome 5 clone CTD-2269E23, complete sequence Length = 134542 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 gcttggccacatccttggttt 457 ||||||||||||||||||||| Sbjct: 17978 gcttggccacatccttggttt 17998
>gb|AF380176.1|AF380176 Homo sapiens HBV pX associated protein 8 large isoform (XAP8alpha) mRNA, complete cds Length = 5009 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 396 ggagaagatgaggtggaagaa 416 ||||||||||||||||||||| Sbjct: 2398 ggagaagatgaggtggaagaa 2418
>dbj|AP000609.5| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-92L10, complete sequence Length = 130964 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 ggagaagatgaggtggaagaa 416 ||||||||||||||||||||| Sbjct: 96841 ggagaagatgaggtggaagaa 96821
>gb|AC114629.12| Mus musculus chromosome 1, clone RP24-111F20, complete sequence Length = 178437 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 609 accggttgacatagctttgg 628 |||||||||||||||||||| Sbjct: 60163 accggttgacatagctttgg 60182
>gb|AC142500.23| Mus musculus strain C57BL/6J clone rp23-334e13, complete sequence Length = 210212 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 caggagcatggcagagtaca 385 |||||||||||||||||||| Sbjct: 196611 caggagcatggcagagtaca 196630
>gb|AC163038.5| Mus musculus BAC clone RP23-180A14 from chromosome 13, complete sequence Length = 213865 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 203 ccaggttgacctagaactccctgtctgg 230 ||||||||||||||||||| || ||||| Sbjct: 37155 ccaggttgacctagaactcactctctgg 37128
>gb|AC131151.2| Homo sapiens 3 BAC RP11-219E24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 109988 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 438 cttggccacatccttggtttcctc 461 |||||||||| ||||||||||||| Sbjct: 1098 cttggccacacccttggtttcctc 1075
>gb|AC134998.2| Homo sapiens 3 BAC RP11-437K21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 127922 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 438 cttggccacatccttggtttcctc 461 |||||||||| ||||||||||||| Sbjct: 127016 cttggccacacccttggtttcctc 126993
>gb|AC127268.2| Mus musculus BAC clone RP23-426K20 from chromosome 3, complete sequence Length = 182377 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 accaggttgacctagaactc 221 |||||||||||||||||||| Sbjct: 125124 accaggttgacctagaactc 125143
>gb|AC165251.2| Mus musculus BAC clone RP24-75C16 from chromosome 13, complete sequence Length = 207075 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 203 ccaggttgacctagaactccctgtctgg 230 ||||||||||||||||||| || ||||| Sbjct: 16756 ccaggttgacctagaactcactctctgg 16783
>gb|AC156795.2| Mus musculus BAC clone RP24-89C4 from chromosome 9, complete sequence Length = 188245 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 accaggttgacctagaactc 221 |||||||||||||||||||| Sbjct: 90747 accaggttgacctagaactc 90728
>emb|AL390788.15| Human DNA sequence from clone RP11-384P5 on chromosome 9, complete sequence Length = 136968 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 cttggccacatccttggttt 457 |||||||||||||||||||| Sbjct: 121040 cttggccacatccttggttt 121059
>emb|AL121986.12|HSBA101J8 Human DNA sequence from clone RP11-101J8 on chromosome 1q21.2-22 Contains the CD1A gene for CD1A antigen, a polypeptide, a high-mobility group nucleosome binding domain 1 (HMGN1) pseudogene, the CD1C gene for CD1C antigen, c polypeptide, the CD1B gene for CD1B antigen, b polypeptide, the CD1E gene for CD1E antigen, e polypeptide, the OR10T2 gene for olfactory receptor, family 10, subfamily T, member 2 and the OR10K2 gene for olfactory receptor, family 10, subfamily K, member 2, complete sequence Length = 168753 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 438 cttggccacatccttggtttcctc 461 |||||||||||||||||| ||||| Sbjct: 114198 cttggccacatccttggtgtcctc 114221
>emb|AL035311.1|DMC52C10 Drosophila melanogaster cosmid clone 52C10 Length = 44855 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 cagggagaagatgaggtgga 412 |||||||||||||||||||| Sbjct: 446 cagggagaagatgaggtgga 427
>gb|AC131960.1| Drosophila pseudoobscura FOSMID DPSF1-548A6 (Children's Hospital Oakland Research Institute Drosophila pseudoobscura FOSMID Library) complete sequence Length = 46234 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 gcagaagagccagcacgaac 557 |||||||||||||||||||| Sbjct: 16194 gcagaagagccagcacgaac 16213
>gb|AC157099.5| Mus musculus 6 BAC RP24-467O4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173237 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 accaggttgacctagaactc 221 |||||||||||||||||||| Sbjct: 135038 accaggttgacctagaactc 135057
>ref|NM_137423.1| Drosophila melanogaster CG18635-RA (CG18635), mRNA Length = 1990 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 cagggagaagatgaggtgga 412 |||||||||||||||||||| Sbjct: 868 cagggagaagatgaggtgga 887
>dbj|AK165429.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:F520013A20 product:ureidopropionase, beta, full insert sequence Length = 3725 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 caggagcatggcagagtaca 385 |||||||||||||||||||| Sbjct: 3219 caggagcatggcagagtaca 3238
>gb|AC010973.6| Homo sapiens BAC clone RP11-148K1 from 7, complete sequence Length = 222605 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 cacatccttggtttcctcct 463 |||||||||||||||||||| Sbjct: 54267 cacatccttggtttcctcct 54248
>dbj|AK163005.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430066J16 product:unclassifiable, full insert sequence Length = 2251 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 accaggttgacctagaactc 221 |||||||||||||||||||| Sbjct: 398 accaggttgacctagaactc 379
>gb|AC159279.2| Mus musculus BAC clone RP23-342D8 from chromosome 12, complete sequence Length = 206464 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 363 agtcaggagcatggcagagtacat 386 |||||||||||||| ||||||||| Sbjct: 187975 agtcaggagcatggaagagtacat 187952
>gb|AC154002.8| Mus musculus 6 BAC RP24-239G21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 188768 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 accaggttgacctagaactc 221 |||||||||||||||||||| Sbjct: 9204 accaggttgacctagaactc 9223
>gb|AC160402.8| Mus musculus 10 BAC RP23-115L17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 224566 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 caggagcatggcagagtaca 385 |||||||||||||||||||| Sbjct: 167193 caggagcatggcagagtaca 167174
>gb|AC091500.1|AC091500 Drosophila melanogaster, chromosome 2R, region 54F-55A, BAC clone BACR20E20, complete sequence Length = 164567 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 cagggagaagatgaggtgga 412 |||||||||||||||||||| Sbjct: 39423 cagggagaagatgaggtgga 39404
>emb|BX005328.9| Zebrafish DNA sequence from clone DKEY-63D15 in linkage group 8, complete sequence Length = 272840 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 556 acagcagagtagaccacaga 575 |||||||||||||||||||| Sbjct: 185015 acagcagagtagaccacaga 185034
>gb|AF229836.2|AF229836 Mus musculus vesicle-associated membrane protein 5 (Vamp5) and CAMP protein (Camp) genes, complete cds Length = 18121 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 accaggttgacctagaactc 221 |||||||||||||||||||| Sbjct: 616 accaggttgacctagaactc 597
>gb|AC007341.10| Homo sapiens chromosome 16 clone RP11-381L15, complete sequence Length = 168612 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 tgccttgctgaaggggagcagtgg 491 ||||||| |||||||||||||||| Sbjct: 69753 tgccttgttgaaggggagcagtgg 69776
>gb|AC007333.8| Homo sapiens chromosome 16 clone RP11-142G1, complete sequence Length = 180837 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 468 tgccttgctgaaggggagcagtgg 491 ||||||| |||||||||||||||| Sbjct: 23493 tgccttgttgaaggggagcagtgg 23470
>gb|AE004840.1| Pseudomonas aeruginosa PAO1, section 401 of 529 of the complete genome Length = 10481 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ccgaggtcgaccagccagtc 366 |||||||||||||||||||| Sbjct: 10292 ccgaggtcgaccagccagtc 10273
>emb|BX005079.6| Zebrafish DNA sequence from clone CH211-176D9, complete sequence Length = 157845 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tttgctcacacaatattaca 102 |||||||||||||||||||| Sbjct: 123362 tttgctcacacaatattaca 123381
>emb|BX537301.12| Mouse DNA sequence from clone RP23-127O5 on chromosome 4, complete sequence Length = 103179 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 ccaggttgacctagaactcc 222 |||||||||||||||||||| Sbjct: 73264 ccaggttgacctagaactcc 73245
>dbj|BS000217.1| Pan troglodytes chromosome 22 clone:PTB-004I03, map 22, complete sequences Length = 53637 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 cttggccacatccttggttt 457 |||||||||||||||||||| Sbjct: 28325 cttggccacatccttggttt 28344
>gb|AC144461.33| Mus musculus strain C57BL/6J clone rp23-427m23, complete sequence Length = 164848 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 caggagcatggcagagtaca 385 |||||||||||||||||||| Sbjct: 40685 caggagcatggcagagtaca 40704
>gb|AC134787.6| Mus musculus chromosome 1, clone RP24-477E13, complete sequence Length = 150960 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gagcatggcagagtacatgc 388 |||||||||||||||||||| Sbjct: 98888 gagcatggcagagtacatgc 98869
>gb|AE003802.3| Drosophila melanogaster chromosome 2R, section 48 of 73 of the complete sequence Length = 246095 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 cagggagaagatgaggtgga 412 |||||||||||||||||||| Sbjct: 212715 cagggagaagatgaggtgga 212696
>gb|AC116115.11| Mus musculus chromosome 6, clone RP23-60P18, complete sequence Length = 215571 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 accaggttgacctagaactc 221 |||||||||||||||||||| Sbjct: 181020 accaggttgacctagaactc 181039
>gb|AC004288.1|AC004288 Drosophila melanogaster DNA sequence (P1 DS08948 (D168)), complete sequence Length = 80446 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 cagggagaagatgaggtgga 412 |||||||||||||||||||| Sbjct: 77710 cagggagaagatgaggtgga 77691
>gb|AC131654.7| Mus musculus BAC clone RP23-232K4 from 10, complete sequence Length = 205819 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ccaggttgacctagaactcc 222 |||||||||||||||||||| Sbjct: 114712 ccaggttgacctagaactcc 114731
>gb|AC136316.13| Mus musculus chromosome 1, clone RP24-331K22, complete sequence Length = 197109 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gagcatggcagagtacatgc 388 |||||||||||||||||||| Sbjct: 185914 gagcatggcagagtacatgc 185933
>dbj|AP002532.1| Homo sapiens genomic DNA, chromosome 1q22-q23, CD1 region, section 1/4 Length = 300000 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 438 cttggccacatccttggtttcctc 461 |||||||||||||||||| ||||| Sbjct: 192927 cttggccacatccttggtgtcctc 192950
>dbj|AB045358.1| Homo sapiens genomic DNA, chromosome 1q22-q23, clone:893n23, complete sequence Length = 118264 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 438 cttggccacatccttggtttcctc 461 |||||||||||||||||| ||||| Sbjct: 60800 cttggccacatccttggtgtcctc 60823 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,578,100 Number of Sequences: 3902068 Number of extensions: 4578100 Number of successful extensions: 91084 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90859 Number of HSP's gapped (non-prelim): 211 length of query: 655 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 632 effective length of database: 17,143,297,704 effective search space: 10834564148928 effective search space used: 10834564148928 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)