>PITX1_DROME (O18400) Pituitary homeobox 1 homolog (D-PTX1)|
          Length = 509

 Score = 35.8 bits (81), Expect = 0.099
 Identities = 22/81 (27%), Positives = 34/81 (41%)
 Frame = -3

Query: 530 SESASQGAAFKRDSGSQTEAIKSPCHDEPLLTADSNCHPGSPTLSPKHERAAKRQRSSDA 351
           S     G     ++  +TE I S  HDEP+ T+            PK+++  KRQR    
Sbjct: 219 SRDRKDGNRSVNETTIKTENISSSGHDEPMTTSGEE---------PKNDKKNKRQRRQRT 269

Query: 350 EFPEAELSLPQHIFESSSGPE 288
            F   +L   +H F  +  P+
Sbjct: 270 HFTSQQLQELEHTFSRNRYPD 290

>RW1_MOUSE (O70472) RW1 protein|
          Length = 1829

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 27/100 (27%), Positives = 39/100 (39%)
 Frame = -3

Query: 599  LSQRRAISSLTLRGQIPRLLHPPSESASQGAAFKRDSGSQTEAIKSPCHDEPLLTADSNC 420
            L QR+A        +  R    P E   + A    DS S T    +P   EPLL  D+  
Sbjct: 1335 LQQRKAKPPKKQEEKEKRGKGKPQEDELKDALADDDSSSTTTETSNP-DTEPLLREDTEK 1393

Query: 419  HPGSPTLSPKHERAAKRQRSSDAEFPEAELSLPQHIFESS 300
            H G P +  K E    + +    +   A+  +P  +  SS
Sbjct: 1394 HKGRPAVPEKQESELSQGKPKSKKLLNAKKEIPTDVKGSS 1433

>TTBK1_HUMAN (Q5TCY1) Tau-tubulin kinase 1 (EC 2.7.11.1) (Brain-derived tau|
           kinase)
          Length = 1321

 Score = 33.5 bits (75), Expect = 0.49
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = -3

Query: 416 PGSPTLSPKHERAAKRQRSSDAEFPEAELSLPQHIFESSSGPEFQQCSVPY 264
           PGSP+ SP H     R+R SD   P+ ++      FE +  P     S+PY
Sbjct: 635 PGSPSHSPLHSGPRPRRRESDPTGPQRQVFSVAPPFEVNGLPRAVPLSLPY 685

>DCDA_BUCBP (Q89AC6) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP|
           decarboxylase)
          Length = 418

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -2

Query: 234 HFGSILEWCHLKGICCCMLT*IVRC 160
           H GS +++CHLK +C  M+  +++C
Sbjct: 187 HIGSGVDYCHLKRVCKAMIDQVLQC 211

>ATMB_SALTY (P22036) Magnesium-transporting ATPase, P-type 1 (EC 3.6.3.2)|
           (Mg(2+) transport ATPase, P-type 1)
          Length = 908

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = -3

Query: 578 SSLTLRGQIPRLLHPPSESASQGAAFKRDSGSQTEAIKSPCHDEPLLTA 432
           + LT+ G +   L PP ESA +  A  RD+G    A+K    D P++TA
Sbjct: 542 TELTIEGMLT-FLDPPKESAGKAIAALRDNG---VAVKVLTGDNPVVTA 586

>DCR1C_RAT (Q5XIX3) Artemis protein (EC 3.1.-.-) (DNA cross-link repair 1C|
           protein) (SNM1-like protein)
          Length = 698

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = -3

Query: 491 SGSQTEAIKSPCHDEPLLTADSNCHPGSPTLSPKHERAAKRQRSSDAEFP---EAELSLP 321
           SG++   +  PC +EP   +     P   +L+      A  Q SSD E P   EAEL  P
Sbjct: 615 SGAEVNGV--PCIEEPDTVSGRKSSPEKTSLTSTQ---ADSQSSSDFEIPSTPEAELPKP 669

Query: 320 QHI 312
           +H+
Sbjct: 670 EHL 672

>SYTL1_HUMAN (Q8IYJ3) Synaptotagmin-like protein 1 (Exophilin-7) (JFC1 protein)|
           (SB146)
          Length = 562

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = -3

Query: 398 SPKHERAAKRQRSSDAEFPEAELSL---PQHIFESSSGPEFQQCSVP 267
           +P H+R A+       E PE  L++   PQ     + GP+F   SVP
Sbjct: 117 APGHDREAEAAVKEKEEGPEPRLTIDEAPQERLRETEGPDFPSPSVP 163

>UBP53_MOUSE (P15975) Inactive ubiquitin carboxyl-terminal hydrolase 53|
            (Ubiquitin-specific peptidase 53) (Per-hexamer repeat
            protein 3)
          Length = 1069

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)
 Frame = -3

Query: 503  FKRDSGSQTEAIKSPCHDEPLLTADSNCHPGSPTLSPKHERAAKRQR------SSDAEFP 342
            +  +S S+   + S C+ +       +CH   P L PK    A   R      S D    
Sbjct: 887  YSDNSLSRELTLLSACNADSCQMPKLHCHRSPPPLPPKKYSTASAPRLERVGLSPDVGVT 946

Query: 341  EA----ELSLPQHIFESSSGPEFQ 282
            EA      SLP+H    +SGP  +
Sbjct: 947  EAFNTNPSSLPKHSLSPASGPSLE 970

>POBB_PSEPS (Q52186) Phenoxybenzoate dioxygenase beta subunit (EC 1.-.-.-)|
           (4-carboxydiphenyl ether;phenoxybenzoate dioxygenase
           beta subunit)
          Length = 319

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +3

Query: 321 RKGQLGLRELGVAASLPLCCPLVLRTESRRTGMTVGICC*QRFIVTWTLD 470
           ++G  G+ E  V A +P    LVL  + R  G T+ ICC        TLD
Sbjct: 269 QQGVCGICETAVLAGVPDHRDLVLSDQERAAGRTMMICCSGSKTAELTLD 318

>POPC_RALSO (Q9RBS2) Protein popC|
          Length = 1024

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
 Frame = -3

Query: 575 SLTLRGQIPRLLHPPSESASQGAAFKRDSGSQTEAIKSPCHDEPLLT------------- 435
           SLTL   +PRL H  S ++S  A  +RD+ +   A  SP H EP  T             
Sbjct: 37  SLTLMPILPRLFHRTSRTSS--ADTQRDARTPPNA--SPLHGEPGRTPRSRGELGRNLRL 92

Query: 434 ---ADSNCHPGSPTLSPKHERAAKRQRSSDAEFPE 339
              A ++  PG+P   P+   +A R   S  + P+
Sbjct: 93  RSNAQTSGTPGTPA-RPQIRASASRTAPSTPQHPQ 126

>CAAL_SILPO (Q5LRC0) Carboxylate-amine ligase SPO2209 (EC 6.3.-.-)|
          Length = 384

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -3

Query: 353 AEFPEAELSLPQHIFESSSGPEFQQCSV 270
           AE PEA +S  Q  FE    PEF QC +
Sbjct: 37  AEAPEALMSTCQADFEGQVSPEFLQCQI 64

>RW1_HUMAN (Q92545) RW1 protein (Fragment)|
          Length = 1805

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 19/78 (24%), Positives = 30/78 (38%)
 Frame = -3

Query: 533  PSESASQGAAFKRDSGSQTEAIKSPCHDEPLLTADSNCHPGSPTLSPKHERAAKRQRSSD 354
            P E   + +    DS S T    +P   EPLL  D+    G   +  KHE    + +   
Sbjct: 1330 PQEDELKDSLADDDSSSTTTETSNP-DTEPLLKEDTEKQKGKQAMPEKHESEMSQVKQKS 1388

Query: 353  AEFPEAELSLPQHIFESS 300
             +    +  +P  +  SS
Sbjct: 1389 KKLLNIKKEIPTDVKPSS 1406


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,019,007
Number of Sequences: 219361
Number of extensions: 1819335
Number of successful extensions: 4904
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4899
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)