>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                           
Query: 367     tgcctctttgctgccctctcgtgcttcggactgagagtaggagaaccgggatgacagttg 426
               |||||||||||||||||||| ||||| |||||    ||||||||||| || |||||||||
Sbjct: 7278563 tgcctctttgctgccctctcatgctttggactagcggtaggagaaccaggctgacagttg 7278504

                    
Query: 427     gaatc 431
               |||||
Sbjct: 7278503 gaatc 7278499



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 66/77 (85%), Gaps = 1/77 (1%)
 Strand = Plus / Minus

                                                                           
Query: 509     caccctgagatgcagattcagatggtgggtgcaggagtcgagggatctgtcctctcagag 568
               |||| |||| || ||||||||||| | ||||||||||||||||| || || || || || 
Sbjct: 7278406 caccttgagttggagattcagatg-taggtgcaggagtcgaggggtcagttctttcggaa 7278348

                                
Query: 569     tcagggaactgatcgct 585
               |||||||||||||||||
Sbjct: 7278347 tcagggaactgatcgct 7278331

>dbj|AP004736.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0062A09
          Length = 173541

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                         
Query: 367   tgcctctttgctgccctctcgtgcttcggactgagagtaggagaaccgggatgacagttg 426
             |||||||||||||||||||| ||||| |||||    ||||||||||| || |||||||||
Sbjct: 12526 tgcctctttgctgccctctcatgctttggactagcggtaggagaaccaggctgacagttg 12467

                  
Query: 427   gaatc 431
             |||||
Sbjct: 12466 gaatc 12462



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 66/77 (85%), Gaps = 1/77 (1%)
 Strand = Plus / Minus

                                                                         
Query: 509   caccctgagatgcagattcagatggtgggtgcaggagtcgagggatctgtcctctcagag 568
             |||| |||| || ||||||||||| | ||||||||||||||||| || || || || || 
Sbjct: 12369 caccttgagttggagattcagatg-taggtgcaggagtcgaggggtcagttctttcggaa 12311

                              
Query: 569   tcagggaactgatcgct 585
             |||||||||||||||||
Sbjct: 12310 tcagggaactgatcgct 12294

>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1381_H04
          Length = 130961

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                          
Query: 367    tgcctctttgctgccctctcgtgcttcggactgagagtaggagaaccgggatgacagttg 426
              |||||||||||||||||||| ||||| |||||    ||||||||||| || |||||||||
Sbjct: 130668 tgcctctttgctgccctctcatgctttggactagcggtaggagaaccaggctgacagttg 130609

                   
Query: 427    gaatc 431
              |||||
Sbjct: 130608 gaatc 130604



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 66/77 (85%), Gaps = 1/77 (1%)
 Strand = Plus / Minus

                                                                          
Query: 509    caccctgagatgcagattcagatggtgggtgcaggagtcgagggatctgtcctctcagag 568
              |||| |||| || ||||||||||| | ||||||||||||||||| || || || || || 
Sbjct: 130511 caccttgagttggagattcagatg-taggtgcaggagtcgaggggtcagttctttcggaa 130453

                               
Query: 569    tcagggaactgatcgct 585
              |||||||||||||||||
Sbjct: 130452 tcagggaactgatcgct 130436

>dbj|AK103241.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123H06, full
            insert sequence
          Length = 1603

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                        
Query: 367  tgcctctttgctgccctctcgtgcttcggactgagagtaggagaaccgggatgacagttg 426
            |||||||||||||||||||| ||||| |||||    ||||||||||| || |||||||||
Sbjct: 1065 tgcctctttgctgccctctcatgctttggactagcggtaggagaaccaggctgacagttg 1006

                 
Query: 427  gaatc 431
            |||||
Sbjct: 1005 gaatc 1001



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 66/77 (85%), Gaps = 1/77 (1%)
 Strand = Plus / Minus

                                                                       
Query: 509 caccctgagatgcagattcagatggtgggtgcaggagtcgagggatctgtcctctcagag 568
           |||| |||| || ||||||||||| | ||||||||||||||||| || || || || || 
Sbjct: 908 caccttgagttggagattcagatg-taggtgcaggagtcgaggggtcagttctttcggaa 850

                            
Query: 569 tcagggaactgatcgct 585
           |||||||||||||||||
Sbjct: 849 tcagggaactgatcgct 833

>emb|AL138822.13| Human DNA sequence from clone RP11-57H24 on chromosome 13 Contains a
             Eukaryotic initiation factor 4A (eIF4a) pseudogene,
             complete sequence
          Length = 126502

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 129   aagtatgcatcatgtaaacaac 150
             ||||||||||||||||||||||
Sbjct: 40917 aagtatgcatcatgtaaacaac 40938

>gb|AC158646.2| Mus musculus 10 BAC RP23-471J13 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 167591

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 158   aaacacctaacaatttatgtca 179
             ||||||||||||||||||||||
Sbjct: 30870 aaacacctaacaatttatgtca 30891

>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
          Length = 150715

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 338   cctccgggaactcggcgtcgc 358
             |||||||||||||||||||||
Sbjct: 13297 cctccgggaactcggcgtcgc 13317

>gb|AC006467.13| Drosophila melanogaster clone BACR03L08, complete sequence
          Length = 170327

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 370   ctctttgctgccctctcgtgc 390
             |||||||||||||||||||||
Sbjct: 96287 ctctttgctgccctctcgtgc 96307

>gb|AC150553.1| Drosophila melanogaster clone BACR09H20, complete sequence
          Length = 179099

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 370    ctctttgctgccctctcgtgc 390
              |||||||||||||||||||||
Sbjct: 144162 ctctttgctgccctctcgtgc 144182

>gb|AE003781.5| Drosophila melanogaster chromosome 2L, section 80 of 83 of the complete
              sequence
          Length = 323775

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 370    ctctttgctgccctctcgtgc 390
              |||||||||||||||||||||
Sbjct: 310537 ctctttgctgccctctcgtgc 310557

>gb|AY662627.1| Crenadactylus ocellatus recombination activating gene 1 (RAG-1) gene,
            partial cds
          Length = 2834

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 483  gcttccactgtctcttttga 502
            ||||||||||||||||||||
Sbjct: 2514 gcttccactgtctcttttga 2495

>gb|AC164958.3| Mus musculus BAC clone RP23-359G24 from chromosome 3, complete sequence
          Length = 230133

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 481   tggcttccactgtctcttttgaaa 504
             ||||||||||||||||| ||||||
Sbjct: 30807 tggcttccactgtctctgttgaaa 30830

>emb|CT025602.8| Mouse DNA sequence from clone RP23-458L4 on chromosome 14, complete
              sequence
          Length = 207863

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     tacccaaactgtcaactcat 71
              ||||||||||||||||||||
Sbjct: 185957 tacccaaactgtcaactcat 185938

>gb|AC129200.4| Mus musculus BAC clone RP24-221J22 from chromosome 2, complete sequence
          Length = 168365

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 479    tctggcttccactgtctcttttga 502
              |||||||||||||| |||||||||
Sbjct: 101595 tctggcttccactggctcttttga 101618

>gb|AC132282.3| Mus musculus BAC clone RP24-348O21 from chromosome 14, complete sequence
          Length = 166747

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     tacccaaactgtcaactcat 71
              ||||||||||||||||||||
Sbjct: 103316 tacccaaactgtcaactcat 103297

>gb|AC112151.3| Mus musculus BAC clone RP24-86M8 from 2, complete sequence
          Length = 216515

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 479    tctggcttccactgtctcttttga 502
              |||||||||||||| |||||||||
Sbjct: 196663 tctggcttccactggctcttttga 196640

>gb|AC149546.14| Medicago truncatula clone mth2-70o13, complete sequence
          Length = 124127

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      aaacatagcatgtaaaaaca 26
              ||||||||||||||||||||
Sbjct: 100129 aaacatagcatgtaaaaaca 100110

>gb|AC145164.11| Medicago truncatula clone mth2-27j21, complete sequence
          Length = 110295

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   acctaacaatttatgtcaac 181
             ||||||||||||||||||||
Sbjct: 25302 acctaacaatttatgtcaac 25283

>gb|AC137668.18| Medicago truncatula clone mth2-5f8, complete sequence
          Length = 133085

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    acctaacaatttatgtcaac 181
              ||||||||||||||||||||
Sbjct: 121784 acctaacaatttatgtcaac 121765

>gb|AC138453.8| Medicago truncatula clone mth2-20m14, complete sequence
          Length = 144639

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     aaacatagcatgtaaaaaca 26
             ||||||||||||||||||||
Sbjct: 38543 aaacatagcatgtaaaaaca 38524

>emb|AL050341.18|HSDJ39G22 Human DNA sequence from clone RP1-39G22 on chromosome 1p32.1-34.3
             Contains the 3' end of the RLF gene for rearranged L-myc
             fusion sequence, the gene for a novel protein, the
             ZMPSTE24 gene for zinc metalloproteinase (STE24 homolog,
             yeast), a pseudogene similar to part of RIO kinase 2
             (yeast) (RIOK2), the COL9A2 gene for collagen, type IX,
             alpha 2 and a CpG island, complete sequence
          Length = 101685

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 461   gactcttgattgcttcggtc 480
             ||||||||||||||||||||
Sbjct: 32815 gactcttgattgcttcggtc 32834

>emb|AL031680.20|HS850H21 Human DNA sequence from clone RP5-850H21 on chromosome 20q13.11-13.2
             Contains the 5' end of the BCAS4 gene for breast carcinoma
             amplified sequence 4, the PARD6B gene for par-6
             partitioning defective 6 homolog beta (C. elegans) and two
             CpG islands, complete sequence
          Length = 117431

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 491   tgtctcttttgaaagctgca 510
             ||||||||||||||||||||
Sbjct: 99932 tgtctcttttgaaagctgca 99951

>gb|AC012151.14| Homo sapiens 12 BAC RP11-677C1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 83945

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    acccaaactgtcaactcatc 72
             ||||||||||||||||||||
Sbjct: 58046 acccaaactgtcaactcatc 58065

>gb|AC114485.2| Homo sapiens chromosome 1 clone RP11-202K23, complete sequence
          Length = 140621

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 170  atttatgtcaacatacaaca 189
            ||||||||||||||||||||
Sbjct: 2610 atttatgtcaacatacaaca 2629

>gb|AC034206.4| Homo sapiens chromosome 5 clone CTC-321K16, complete sequence
          Length = 108123

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 368   gcctctttgctgccctctcgtgct 391
             |||||||||||||||||| |||||
Sbjct: 16044 gcctctttgctgccctctggtgct 16067

>dbj|AK054247.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN
           full-length enriched library, clone:E330002O13
           product:unclassifiable, full insert sequence
          Length = 780

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 481 tggcttccactgtctcttttgaaa 504
           ||||||||||||||||| ||||||
Sbjct: 469 tggcttccactgtctctgttgaaa 446

>gb|AC141889.4| Mus musculus BAC clone RP23-434P15 from chromosome 3, complete sequence
          Length = 186264

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 481   tggcttccactgtctcttttgaaa 504
             ||||||||||||||||| ||||||
Sbjct: 97399 tggcttccactgtctctgttgaaa 97422

>emb|AL935170.11| Mouse DNA sequence from clone RP23-480P16 on chromosome 2, complete
              sequence
          Length = 181154

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 479    tctggcttccactgtctcttttga 502
              |||||||||||||| |||||||||
Sbjct: 135153 tctggcttccactggctcttttga 135130

>emb|AL935312.10| Mouse DNA sequence from clone RP23-56A7 on chromosome 2, complete
              sequence
          Length = 124236

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 491    tgtctcttttgaaagctgca 510
              ||||||||||||||||||||
Sbjct: 110146 tgtctcttttgaaagctgca 110127

>gb|AC005738.1|AC005738 Homo sapiens chromosome 5, BAC clone 7g12 (LBNL H126), complete sequence
          Length = 134506

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 368    gcctctttgctgccctctcgtgct 391
              |||||||||||||||||| |||||
Sbjct: 109589 gcctctttgctgccctctggtgct 109612

>gb|AC164108.2| Mus musculus BAC clone RP24-96K15 from chromosome 16, complete sequence
          Length = 180800

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    aacacctaacaatttatgtc 178
              ||||||||||||||||||||
Sbjct: 109323 aacacctaacaatttatgtc 109304

>emb|AL805981.11| Mouse DNA sequence from clone RP23-275G4 on chromosome 4, complete
             sequence
          Length = 210185

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     gaaaacatagcatgtaaaaa 24
             ||||||||||||||||||||
Sbjct: 97535 gaaaacatagcatgtaaaaa 97516


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,277,439
Number of Sequences: 3902068
Number of extensions: 4277439
Number of successful extensions: 76071
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75980
Number of HSP's gapped (non-prelim): 87
length of query: 607
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 584
effective length of database: 17,143,297,704
effective search space: 10011685859136
effective search space used: 10011685859136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)