ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags8b01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY106058.1| Zea mays PCO147797 mRNA sequence 222 1e-54
2ref|NM_190598.1| Oryza sativa (japonica cultivar-group), predic... 123 7e-25
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
4dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
5dbj|AK103729.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 7e-25
6ref|NM_190596.1| Oryza sativa (japonica cultivar-group), predic... 100 1e-17
7dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
8emb|AJ890025.1| Zea mays partial mRNA for putative aldose reduct... 90 9e-15
9gb|AC003999.2| Homo sapiens PAC clone RP5-1139P1 from 7, complet... 44 0.49
10gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete s... 44 0.49
11gb|AC104012.11| Homo sapiens chromosome 8, clone RP11-281N10, co... 44 0.49
12emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete ch... 42 1.9
13ref|XM_764061.1| Giardia lamblia ATCC 50803 hypothetical protein... 42 1.9
14emb|BX936390.7| Zebrafish DNA sequence from clone DKEY-6E2 in li... 42 1.9
15gb|M94085.1|RHMDGK R.meliloti ORF1, complete cds; ORF2, complete... 42 1.9
16ref|NM_106082.1| Arabidopsis thaliana unknown protein AT1G74220 ... 40 7.6
17gb|AC138714.4| Mus musculus chromosome 18 clone RP23-406C12, com... 40 7.6
18gb|AC092728.2| Canis familiaris clone RP81-237O17, complete sequ... 40 7.6
19emb|AL031005.2|HS329E20 Human DNA sequence from clone RP3-329E20... 40 7.6
20emb|AL451138.5| Human DNA sequence from clone RP11-152H3 on chro... 40 7.6
21gb|AC096051.7| Rattus norvegicus 10 BAC CH230-21G1 (Children's H... 40 7.6
22emb|X97606.1|MSRNAAAA M.sativa mRNA translated from abscisic act... 40 7.6
23emb|AL627268.1| Salmonella enterica serovar Typhi (Salmonella ty... 40 7.6
24emb|AL512647.14| Mouse DNA sequence from clone RP23-47A2 on chro... 40 7.6
25gb|AC110788.3| Homo sapiens BAC clone RP11-473D24 from 4, comple... 40 7.6
26ref|XM_626858.1| Cryptosporidium parvum Iowa II hypothetical pro... 40 7.6
27gb|AC153145.4| Mus musculus BAC clone RP23-222C3 from chromosome... 40 7.6
28dbj|AK076394.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 40 7.6
29gb|AC020579.5|AC020579 Arabidopsis thaliana chromosome 1 BAC F1O... 40 7.6
30dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.6
31gb|AY953519.1| Homo sapiens endothelin converting enzyme 1 (ECE1... 40 7.6
32gb|AC113178.10| Mus musculus chromosome 15, clone RP23-395K11, c... 40 7.6
33gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi... 40 7.6
34gb|AC147989.4| Mus musculus BAC clone RP24-468I14 from 18, compl... 40 7.6 
>gb|AY106058.1| Zea mays PCO147797 mRNA sequence
          Length = 1497

 Score =  222 bits (112), Expect = 1e-54
 Identities = 163/180 (90%)
 Strand = Plus / Minus

                                                                        
Query: 381  cctgcttaatttccgagaactttgcaagcacgtcatctggaattgaccaatcatgaacat 440
            |||||||||| || |||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 1076 cctgcttaatctcagagaactttgcaagcaagtcatctggaattgaccaatcataaacat 1017

                                                                        
Query: 441  caaggttttgttttatcctttcctgattcgtgctctttggtagcacgctgtgacccgtct 500
            |||||||||| ||||||||||| | ||||||||||||||| || || ||||||||| |||
Sbjct: 1016 caaggttttgctttatcctttcttcattcgtgctctttggaagaacactgtgacccatct 957

                                                                        
Query: 501  gaatgttccagcgcagagccacttgtgcaggtgtcttgccgagtttctcggatattgaga 560
            ||||||||||||||||||||||||||||||  || || ||||||||||| | ||||||||
Sbjct: 956  gaatgttccagcgcagagccacttgtgcagaagttttcccgagtttctcagctattgaga 897



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                        
Query: 293  tcccacagctcctcgtgggtcttgtaaacgctctgtggattaacggcgaagttgcctctg 352
            ||||| |||||||| ||||||||||||||||||| |||||||||   |||||||||||| 
Sbjct: 1146 tcccagagctcctcatgggtcttgtaaacgctctctggattaacaatgaagttgcctcta 1087

                       
Query: 353  agcagcctagc 363
            || ||||||||
Sbjct: 1086 agtagcctagc 1076
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>ref|NM_190598.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 936

 Score =  123 bits (62), Expect = 7e-25
 Identities = 143/170 (84%)
 Strand = Plus / Minus

                                                                       
Query: 380 acctgcttaatttccgagaactttgcaagcacgtcatctggaattgaccaatcatgaaca 439
           ||||||||||| ||||||||||| ||||||| ||| |||||||| ||||| |||| ||||
Sbjct: 854 acctgcttaatctccgagaacttagcaagcaagtcctctggaatagaccagtcataaaca 795

                                                                       
Query: 440 tcaaggttttgttttatcctttcctgattcgtgctctttggtagcacgctgtgacccgtc 499
           || | ||| || ||||||||||| | | ||   || ||||| || || ||||||||| ||
Sbjct: 794 tctaagttctgctttatcctttcttcactcacactttttgggagtacactgtgacccatc 735

                                                             
Query: 500 tgaatgttccagcgcagagccacttgtgcaggtgtcttgccgagtttctc 549
           ||||||||||||||||| |||||||||||||| || ||||| || |||||
Sbjct: 734 tgaatgttccagcgcagcgccacttgtgcaggagttttgccaagcttctc 685



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                       
Query: 280 ctaaatctcactgtcccacagctcctcgtgggtcttgtaaacgctctgtggattaacggc 339
           |||||| || |||||||| |||||||| |||||||||||||||||||||||||| ||   
Sbjct: 936 ctaaatttccctgtcccagagctcctcatgggtcttgtaaacgctctgtggattgacaat 877

                                 
Query: 340 gaagttgcctctgagcagccta 361
           ||||||||| ||||||||||||
Sbjct: 876 gaagttgcccctgagcagccta 855
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  123 bits (62), Expect = 7e-25
 Identities = 143/170 (84%)
 Strand = Plus / Minus

                                                                            
Query: 380      acctgcttaatttccgagaactttgcaagcacgtcatctggaattgaccaatcatgaaca 439
                ||||||||||| ||||||||||| ||||||| ||| |||||||| ||||| |||| ||||
Sbjct: 36406755 acctgcttaatctccgagaacttagcaagcaagtcctctggaatagaccagtcataaaca 36406696

                                                                            
Query: 440      tcaaggttttgttttatcctttcctgattcgtgctctttggtagcacgctgtgacccgtc 499
                || | ||| || ||||||||||| | | ||   || ||||| || || ||||||||| ||
Sbjct: 36406695 tctaagttctgctttatcctttcttcactcacactttttgggagtacactgtgacccatc 36406636

                                                                  
Query: 500      tgaatgttccagcgcagagccacttgtgcaggtgtcttgccgagtttctc 549
                ||||||||||||||||| |||||||||||||| || ||||| || |||||
Sbjct: 36406635 tgaatgttccagcgcagcgccacttgtgcaggagttttgccaagcttctc 36406586



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 140/170 (82%)
 Strand = Plus / Minus

                                                                            
Query: 380      acctgcttaatttccgagaactttgcaagcacgtcatctggaattgaccaatcatgaaca 439
                ||||||||||| || ||||||||  |||||| ||| |||||||| ||||| |||| ||||
Sbjct: 36399252 acctgcttaatctcagagaacttaacaagcaagtcctctggaatagaccagtcataaaca 36399193

                                                                            
Query: 440      tcaaggttttgttttatcctttcctgattcgtgctctttggtagcacgctgtgacccgtc 499
                || | ||| || ||||||||||| |   ||   || ||||| || || ||||||||| ||
Sbjct: 36399192 tctatgttctgctttatcctttcttcggtcacactttttgggagtacactgtgacccatc 36399133

                                                                  
Query: 500      tgaatgttccagcgcagagccacttgtgcaggtgtcttgccgagtttctc 549
                |||||||||||| |||| |||||||||||||| || |||||||| |||||
Sbjct: 36399132 tgaatgttccagtgcagtgccacttgtgcaggagttttgccgagcttctc 36399083



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 75/84 (89%)
 Strand = Plus / Minus

                                                                            
Query: 278      tcctaaatctcactgtcccacagctcctcgtgggtcttgtaaacgctctgtggattaacg 337
                |||||||| || |||||||| |||||||| |||||||||||||||||||||||||| || 
Sbjct: 36407643 tcctaaatttccctgtcccagagctcctcatgggtcttgtaaacgctctgtggattgaca 36407584

                                        
Query: 338      gcgaagttgcctctgagcagccta 361
                  ||||||||| ||||||||||||
Sbjct: 36407583 atgaagttgcccctgagcagccta 36407560
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>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0005H10
          Length = 142885

 Score =  123 bits (62), Expect = 7e-25
 Identities = 143/170 (84%)
 Strand = Plus / Minus

                                                                         
Query: 380   acctgcttaatttccgagaactttgcaagcacgtcatctggaattgaccaatcatgaaca 439
             ||||||||||| ||||||||||| ||||||| ||| |||||||| ||||| |||| ||||
Sbjct: 58594 acctgcttaatctccgagaacttagcaagcaagtcctctggaatagaccagtcataaaca 58535

                                                                         
Query: 440   tcaaggttttgttttatcctttcctgattcgtgctctttggtagcacgctgtgacccgtc 499
             || | ||| || ||||||||||| | | ||   || ||||| || || ||||||||| ||
Sbjct: 58534 tctaagttctgctttatcctttcttcactcacactttttgggagtacactgtgacccatc 58475

                                                               
Query: 500   tgaatgttccagcgcagagccacttgtgcaggtgtcttgccgagtttctc 549
             ||||||||||||||||| |||||||||||||| || ||||| || |||||
Sbjct: 58474 tgaatgttccagcgcagcgccacttgtgcaggagttttgccaagcttctc 58425



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 140/170 (82%)
 Strand = Plus / Minus

                                                                         
Query: 380   acctgcttaatttccgagaactttgcaagcacgtcatctggaattgaccaatcatgaaca 439
             ||||||||||| || ||||||||  |||||| ||| |||||||| ||||| |||| ||||
Sbjct: 51091 acctgcttaatctcagagaacttaacaagcaagtcctctggaatagaccagtcataaaca 51032

                                                                         
Query: 440   tcaaggttttgttttatcctttcctgattcgtgctctttggtagcacgctgtgacccgtc 499
             || | ||| || ||||||||||| |   ||   || ||||| || || ||||||||| ||
Sbjct: 51031 tctatgttctgctttatcctttcttcggtcacactttttgggagtacactgtgacccatc 50972

                                                               
Query: 500   tgaatgttccagcgcagagccacttgtgcaggtgtcttgccgagtttctc 549
             |||||||||||| |||| |||||||||||||| || |||||||| |||||
Sbjct: 50971 tgaatgttccagtgcagtgccacttgtgcaggagttttgccgagcttctc 50922



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 75/84 (89%)
 Strand = Plus / Minus

                                                                         
Query: 278   tcctaaatctcactgtcccacagctcctcgtgggtcttgtaaacgctctgtggattaacg 337
             |||||||| || |||||||| |||||||| |||||||||||||||||||||||||| || 
Sbjct: 59482 tcctaaatttccctgtcccagagctcctcatgggtcttgtaaacgctctgtggattgaca 59423

                                     
Query: 338   gcgaagttgcctctgagcagccta 361
               ||||||||| ||||||||||||
Sbjct: 59422 atgaagttgcccctgagcagccta 59399
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>dbj|AK103729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138E18, full
            insert sequence
          Length = 1414

 Score =  123 bits (62), Expect = 7e-25
 Identities = 143/170 (84%)
 Strand = Plus / Minus

                                                                        
Query: 380  acctgcttaatttccgagaactttgcaagcacgtcatctggaattgaccaatcatgaaca 439
            ||||||||||| ||||||||||| ||||||| ||| |||||||| ||||| |||| ||||
Sbjct: 1127 acctgcttaatctccgagaacttagcaagcaagtcctctggaatagaccagtcataaaca 1068

                                                                        
Query: 440  tcaaggttttgttttatcctttcctgattcgtgctctttggtagcacgctgtgacccgtc 499
            || | ||| || ||||||||||| | | ||   || ||||| || || ||||||||| ||
Sbjct: 1067 tctaagttctgctttatcctttcttcactcacactttttgggagtacactgtgacccatc 1008

                                                              
Query: 500  tgaatgttccagcgcagagccacttgtgcaggtgtcttgccgagtttctc 549
            ||||||||||||||||| |||||||||||||| || ||||| || |||||
Sbjct: 1007 tgaatgttccagcgcagcgccacttgtgcaggagttttgccaagcttctc 958



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 75/84 (89%)
 Strand = Plus / Minus

                                                                        
Query: 278  tcctaaatctcactgtcccacagctcctcgtgggtcttgtaaacgctctgtggattaacg 337
            |||||||| || |||||||| |||||||| |||||||||||||||||||||||||| || 
Sbjct: 1211 tcctaaatttccctgtcccagagctcctcatgggtcttgtaaacgctctgtggattgaca 1152

                                    
Query: 338  gcgaagttgcctctgagcagccta 361
              ||||||||| ||||||||||||
Sbjct: 1151 atgaagttgcccctgagcagccta 1128
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>ref|NM_190596.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 936

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 140/170 (82%)
 Strand = Plus / Minus

                                                                       
Query: 380 acctgcttaatttccgagaactttgcaagcacgtcatctggaattgaccaatcatgaaca 439
           ||||||||||| || ||||||||  |||||| ||| |||||||| ||||| |||| ||||
Sbjct: 854 acctgcttaatctcagagaacttaacaagcaagtcctctggaatagaccagtcataaaca 795

                                                                       
Query: 440 tcaaggttttgttttatcctttcctgattcgtgctctttggtagcacgctgtgacccgtc 499
           || | ||| || ||||||||||| |   ||   || ||||| || || ||||||||| ||
Sbjct: 794 tctatgttctgctttatcctttcttcggtcacactttttgggagtacactgtgacccatc 735

                                                             
Query: 500 tgaatgttccagcgcagagccacttgtgcaggtgtcttgccgagtttctc 549
           |||||||||||| |||| |||||||||||||| || |||||||| |||||
Sbjct: 734 tgaatgttccagtgcagtgccacttgtgcaggagttttgccgagcttctc 685
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>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0446B05
          Length = 149145

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 140/170 (82%)
 Strand = Plus / Minus

                                                                          
Query: 380    acctgcttaatttccgagaactttgcaagcacgtcatctggaattgaccaatcatgaaca 439
              ||||||||||| || ||||||||  |||||| ||| |||||||| ||||| |||| ||||
Sbjct: 149129 acctgcttaatctcagagaacttaacaagcaagtcctctggaatagaccagtcataaaca 149070

                                                                          
Query: 440    tcaaggttttgttttatcctttcctgattcgtgctctttggtagcacgctgtgacccgtc 499
              || | ||| || ||||||||||| |   ||   || ||||| || || ||||||||| ||
Sbjct: 149069 tctatgttctgctttatcctttcttcggtcacactttttgggagtacactgtgacccatc 149010

                                                                
Query: 500    tgaatgttccagcgcagagccacttgtgcaggtgtcttgccgagtttctc 549
              |||||||||||| |||| |||||||||||||| || |||||||| |||||
Sbjct: 149009 tgaatgttccagtgcagtgccacttgtgcaggagttttgccgagcttctc 148960
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>emb|AJ890025.1| Zea mays partial mRNA for putative aldose reductase (9-24 gene),
           cultivar A69Y, from endosperm tissue
          Length = 548

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                       
Query: 275 ccttcctaaatctcactgtcccacagctcctcgtgggtcttgtaaacgctctgtggatta 334
           |||||||||| |||||  ||||| |||||||| ||||||||||||||||||| |||||||
Sbjct: 133 ccttcctaaagctcaccatcccagagctcctcatgggtcttgtaaacgctctctggatta 74

                                        
Query: 335 acggcgaagttgcctctgagcagcctagc 363
           ||   |||||||||||| || ||||||||
Sbjct: 73  acaatgaagttgcctctaagtagcctagc 45



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                        
Query: 381 cctgcttaatttccgagaactttgcaagcacgtcatctggaattg 425
           |||||||||| || |||||||||||||||| ||||||||||||||
Sbjct: 45  cctgcttaatctcagagaactttgcaagcaagtcatctggaattg 1
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>gb|AC003999.2| Homo sapiens PAC clone RP5-1139P1 from 7, complete sequence
          Length = 133457

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 97    aaaaaccacataaataatgaag 118
             ||||||||||||||||||||||
Sbjct: 10571 aaaaaccacataaataatgaag 10592
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>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence
          Length = 108028

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 91/114 (79%)
 Strand = Plus / Minus

                                                                         
Query: 379   tacctgcttaatttccgagaactttgcaagcacgtcatctggaattgaccaatcatgaac 438
             |||||| |||||||| || ||||| | || || ||| || ||||| |||||||| |  ||
Sbjct: 81581 tacctggttaatttcagaaaacttaggaaacaggtcttccggaatcgaccaatcgtatac 81522

                                                                   
Query: 439   atcaaggttttgttttatcctttcctgattcgtgctctttggtagcacgctgtg 492
              ||||| ||||  || |||||  ||| ||| |||||||| ||||||||||||||
Sbjct: 81521 gtcaagattttccttgatcctagcctcattagtgctcttaggtagcacgctgtg 81468
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>gb|AC104012.11| Homo sapiens chromosome 8, clone RP11-281N10, complete sequence
          Length = 170668

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 429   aatcatgaacatcaaggttttgtttt 454
             |||||| |||||||||||||||||||
Sbjct: 50935 aatcatcaacatcaaggttttgtttt 50910
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>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12
          Length = 306250

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 530    ggtgtcttgccgagtttctcg 550
              |||||||||||||||||||||
Sbjct: 261049 ggtgtcttgccgagtttctcg 261069
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>ref|XM_764061.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_90_25807_22631)
            partial mRNA
          Length = 3177

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 435  gaacatcaaggttttgtttta 455
            |||||||||||||||||||||
Sbjct: 1360 gaacatcaaggttttgtttta 1340
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>emb|BX936390.7| Zebrafish DNA sequence from clone DKEY-6E2 in linkage group 6, complete
              sequence
          Length = 168226

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 433    atgaacatcaaggttttgttt 453
              |||||||||||||||||||||
Sbjct: 112750 atgaacatcaaggttttgttt 112730
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>gb|M94085.1|RHMDGK R.meliloti ORF1, complete cds; ORF2, complete cds; and
           diacylglycerol kinase (dgkA) gene, complete cds
          Length = 1258

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 530 ggtgtcttgccgagtttctcg 550
           |||||||||||||||||||||
Sbjct: 419 ggtgtcttgccgagtttctcg 399
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>ref|NM_106082.1| Arabidopsis thaliana unknown protein AT1G74220 mRNA, complete cds
          Length = 951

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 111 taatgaagctgctaacaaca 130
           ||||||||||||||||||||
Sbjct: 621 taatgaagctgctaacaaca 640
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>gb|AC138714.4| Mus musculus chromosome 18 clone RP23-406C12, complete sequence
          Length = 191928

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 98    aaaaccacataaataatgaagctg 121
             ||||||| ||||||||||||||||
Sbjct: 36494 aaaaccaaataaataatgaagctg 36517
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>gb|AC092728.2| Canis familiaris clone RP81-237O17, complete sequence
          Length = 141578

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   tcactgtcccacagctcctc 306
             ||||||||||||||||||||
Sbjct: 63883 tcactgtcccacagctcctc 63902
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>emb|AL031005.2|HS329E20 Human DNA sequence from clone RP3-329E20 on chromosome 1p34.4-36.13
             Contains the 5' UTR of the EIF4G3 gene for  eukaryotic
             translation initiation factor 4 gamma, 3, the 3' end of
             the ECE1 gene for endothelin converting enzyme 1, a novel
             gene and a CpG island, complete sequence
          Length = 109906

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 344   ttgcctctgagcagcctagcatga 367
             ||||||||||| ||||||||||||
Sbjct: 96488 ttgcctctgaggagcctagcatga 96511
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>emb|AL451138.5| Human DNA sequence from clone RP11-152H3 on chromosome 9, complete
             sequence
          Length = 117273

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 446   ttttgttttatcctttcctg 465
             ||||||||||||||||||||
Sbjct: 76518 ttttgttttatcctttcctg 76537
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>gb|AC096051.7| Rattus norvegicus 10 BAC CH230-21G1 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 216194

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 421   aattgaccaatcatgaacat 440
             ||||||||||||||||||||
Sbjct: 82157 aattgaccaatcatgaacat 82176
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>emb|X97606.1|MSRNAAAA M.sativa mRNA translated from abscisic activated gene
          Length = 1231

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 89/112 (79%)
 Strand = Plus / Minus

                                                                       
Query: 381 cctgcttaatttccgagaactttgcaagcacgtcatctggaattgaccaatcatgaacat 440
           ||||||||||||| || ||||| | || || ||| || ||||| |||||||| |  || |
Sbjct: 889 cctgcttaatttcagaaaacttgggaaacaagtcttcaggaatagaccaatcgtacacgt 830

                                                               
Query: 441 caaggttttgttttatcctttcctgattcgtgctctttggtagcacgctgtg 492
           |||| ||||  || |||||  ||| ||| |||||||| || |||||||||||
Sbjct: 829 caagatttttcttgatcctagcctcattggtgctcttagggagcacgctgtg 778
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>emb|AL627268.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
              complete chromosome; segment 4/20
          Length = 294050

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 386    ttaatttccgagaactttgc 405
              ||||||||||||||||||||
Sbjct: 271130 ttaatttccgagaactttgc 271111
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>emb|AL512647.14| Mouse DNA sequence from clone RP23-47A2 on chromosome 13 Contains part
             of a novel gene (6620401C13Rik), complete sequence
          Length = 199848

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   ccacataaataatgaagctg 121
             ||||||||||||||||||||
Sbjct: 69114 ccacataaataatgaagctg 69095
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>gb|AC110788.3| Homo sapiens BAC clone RP11-473D24 from 4, complete sequence
          Length = 80766

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 446   ttttgttttatcctttcctg 465
             ||||||||||||||||||||
Sbjct: 49119 ttttgttttatcctttcctg 49100
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>ref|XM_626858.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd3_3010),
            partial mRNA
          Length = 7266

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 106  ataaataatgaagctgctaa 125
            ||||||||||||||||||||
Sbjct: 3754 ataaataatgaagctgctaa 3773
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>gb|AC153145.4| Mus musculus BAC clone RP23-222C3 from chromosome 18, complete sequence
          Length = 193382

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 98    aaaaccacataaataatgaagctg 121
             ||||||| ||||||||||||||||
Sbjct: 36493 aaaaccaaataaataatgaagctg 36516
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>dbj|AK076394.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
            library, clone:4732490M18 product:unclassifiable, full
            insert sequence
          Length = 3306

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 534  tcttgccgagtttctcggat 553
            ||||||||||||||||||||
Sbjct: 1268 tcttgccgagtttctcggat 1287
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>gb|AC020579.5|AC020579 Arabidopsis thaliana chromosome 1 BAC F1O17 genomic sequence, complete
             sequence
          Length = 50821

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   taatgaagctgctaacaaca 130
             ||||||||||||||||||||
Sbjct: 39441 taatgaagctgctaacaaca 39460
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 251     cctgctcaggatgagcgacg 270
               ||||||||||||||||||||
Sbjct: 2695320 cctgctcaggatgagcgacg 2695339
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>gb|AY953519.1| Homo sapiens endothelin converting enzyme 1 (ECE1) gene, complete cds
          Length = 74383

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 344   ttgcctctgagcagcctagcatga 367
             ||||||||||| ||||||||||||
Sbjct: 23794 ttgcctctgaggagcctagcatga 23771
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>gb|AC113178.10| Mus musculus chromosome 15, clone RP23-395K11, complete sequence
          Length = 198803

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 534   tcttgccgagtttctcggat 553
             ||||||||||||||||||||
Sbjct: 78741 tcttgccgagtttctcggat 78722
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>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 386     ttaatttccgagaactttgc 405
               ||||||||||||||||||||
Sbjct: 1950947 ttaatttccgagaactttgc 1950966
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>gb|AC147989.4| Mus musculus BAC clone RP24-468I14 from 18, complete sequence
          Length = 204168

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 98    aaaaccacataaataatgaagctg 121
             ||||||| ||||||||||||||||
Sbjct: 54351 aaaaccaaataaataatgaagctg 54328


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,583,221
Number of Sequences: 3902068
Number of extensions: 4583221
Number of successful extensions: 77784
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77658
Number of HSP's gapped (non-prelim): 122
length of query: 560
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 537
effective length of database: 17,143,297,704
effective search space: 9205950867048
effective search space used: 9205950867048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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