| Clone Name | rbags8a24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016727.1| Zea mays clone Contig560 mRNA sequence Length = 1617 Score = 504 bits (254), Expect = e-139 Identities = 332/358 (92%) Strand = Plus / Minus Query: 211 cagatctcctcgaccgcggccacgatctgcgcgggctgcacgacggtcgcgtcctccagg 270 ||||||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 1353 cagatctgctcgacggcggccacgatctgcgcgggctgcaccacggtggcgtcctccagc 1294 Query: 271 gtcgcggcgtagggggtcggcacgtcctgcgaagacaggcacacggggcgagtgtccagc 330 ||||||||||| |||||||||||||||||||| |||||||||| | | | | |||||| Sbjct: 1293 gtcgcggcgtacggggtcggcacgtcctgcgacgacaggcacatgatgggggcgtccagg 1234 Query: 331 tcatcccagaagttgtcgatgatggccgacctcaggctggcgccgatgccgcccgtccgc 390 | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1233 tagtcccagaagttgtcgatgatggccgaccgcaggctggcgccgatgccgcccgtccgc 1174 Query: 391 atgcactcctccacgatcagcacgcggtgggtcttcttgatggagttcccgatggtgtgc 450 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 1173 atgcactcctccacgatcagcacgcggtgggtcttcttgatcgagttcccgatcgtgtgc 1114 Query: 451 aggtcgaacggcttcagcgacctgatgtcgatcacctccgggtcgtaccccttgttcacc 510 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 1113 aggtcgaacggcttcagcgacctgatgtcgatgacctcggggtcgtaccccttgttcacc 1054 Query: 511 aacgtcttgacggcctgcatcacgtggtacctcatgcgggagtaggtcaggatggtca 568 | ||||||| | |||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 1053 agcgtcttggcagcctgcatcacgtggtacctcatgcgggagtacgtgaggatggtca 996
>gb|AY108511.1| Zea mays PCO079010 mRNA sequence Length = 1714 Score = 504 bits (254), Expect = e-139 Identities = 332/358 (92%) Strand = Plus / Minus Query: 211 cagatctcctcgaccgcggccacgatctgcgcgggctgcacgacggtcgcgtcctccagg 270 ||||||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 1367 cagatctgctcgacggcggccacgatctgcgcgggctgcaccacggtggcgtcctccagc 1308 Query: 271 gtcgcggcgtagggggtcggcacgtcctgcgaagacaggcacacggggcgagtgtccagc 330 ||||||||||| |||||||||||||||||||| |||||||||| | | | | |||||| Sbjct: 1307 gtcgcggcgtacggggtcggcacgtcctgcgacgacaggcacatgatgggggcgtccagg 1248 Query: 331 tcatcccagaagttgtcgatgatggccgacctcaggctggcgccgatgccgcccgtccgc 390 | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1247 tagtcccagaagttgtcgatgatggccgaccgcaggctggcgccgatgccgcccgtccgc 1188 Query: 391 atgcactcctccacgatcagcacgcggtgggtcttcttgatggagttcccgatggtgtgc 450 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 1187 atgcactcctccacgatcagcacgcggtgggtcttcttgatcgagttcccgatcgtgtgc 1128 Query: 451 aggtcgaacggcttcagcgacctgatgtcgatcacctccgggtcgtaccccttgttcacc 510 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 1127 aggtcgaacggcttcagcgacctgatgtcgatgacctcggggtcgtaccccttgttcacc 1068 Query: 511 aacgtcttgacggcctgcatcacgtggtacctcatgcgggagtaggtcaggatggtca 568 | ||||||| | |||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 1067 agcgtcttggcagcctgcatcacgtggtacctcatgcgggagtacgtgaggatggtca 1010
>emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0007L18 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183327 Score = 274 bits (138), Expect = 3e-70 Identities = 288/338 (85%) Strand = Plus / Minus Query: 229 gccacgatctgcgcgggctgcacgacggtcgcgtcctccagggtcgcggcgtagggggtc 288 ||||| ||||| || |||||||||||||| || |||||||| | ||| || || || ||| Sbjct: 88824 gccacaatctgggcaggctgcacgacggtggcatcctccagaggcgcagcatacggcgtc 88765 Query: 289 ggcacgtcctgcgaagacaggcacacggggcgagtgtccagctcatcccagaagttgtcg 348 ||||| |||||||| |||| ||||| | | | | ||| || | ||||||||||||||| Sbjct: 88764 ggcacatcctgcgacgacaagcacatgatgggtgcgtcaaggtagtcccagaagttgtcg 88705 Query: 349 atgatggccgacctcaggctggcgccgatgccgcccgtccgcatgcactcctccacgatc 408 ||||||||||| |||| |||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 88704 atgatggccgatctcaagctggcgccgatcccgcccgtgcgcatgcactcctccacaatc 88645 Query: 409 agcacgcggtgggtcttcttgatggagttcccgatggtgtgcaggtcgaacggcttcagc 468 ||||||||||||||||||||||| ||||| || |||||||||||||| || ||||||| | Sbjct: 88644 agcacgcggtgggtcttcttgatagagttgcctatggtgtgcaggtcaaatggcttcaac 88585 Query: 469 gacctgatgtcgatcacctccgggtcgtaccccttgttcaccaacgtcttgacggcctgc 528 |||||||||||||| ||||| || || ||||| |||||||||| ||||| | |||||| Sbjct: 88584 gacctgatgtcgatgacctcgggatcataccctttgttcaccagggtcttcgcagcctgc 88525 Query: 529 atcacgtggtacctcatgcgggagtaggtcaggatggt 566 ||||| ||||||||||| || ||||| || |||||||| Sbjct: 88524 atcacatggtacctcatccgcgagtatgtgaggatggt 88487
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 274 bits (138), Expect = 3e-70 Identities = 303/358 (84%) Strand = Plus / Minus Query: 211 cagatctcctcgaccgcggccacgatctgcgcgggctgcacgacggtcgcgtcctccagg 270 ||||||| |||||| |||||||| || || || |||||||||||||| ||||||||||| Sbjct: 26236805 cagatctgctcgacagcggccacaatttgggcaggctgcacgacggttgcgtcctccaga 26236746 Query: 271 gtcgcggcgtagggggtcggcacgtcctgcgaagacaggcacacggggcgagtgtccagc 330 || || || || || ||||| || ||||| || |||| ||||| | | | | || || Sbjct: 26236745 gttgcagcatatggcgtcggtacatcctgtgatgacaagcacatgatgggggcatcaagg 26236686 Query: 331 tcatcccagaagttgtcgatgatggccgacctcaggctggcgccgatgccgcccgtccgc 390 | ||||||||||| || ||||||||||||||||||||||||||||| || ||||| ||| Sbjct: 26236685 tagtcccagaagttatcaatgatggccgacctcaggctggcgccgataccacccgttcgc 26236626 Query: 391 atgcactcctccacgatcagcacgcggtgggtcttcttgatggagttcccgatggtgtgc 450 |||||||||||||| ||||| ||||||||||||||||| ||||||||||| || |||||| Sbjct: 26236625 atgcactcctccacaatcagaacgcggtgggtcttcttaatggagttccctatcgtgtgc 26236566 Query: 451 aggtcgaacggcttcagcgacctgatgtcgatcacctccgggtcgtaccccttgttcacc 510 || ||||| || |||||||||||||| || || |||||||| |||||||| ||||||||| Sbjct: 26236565 agatcgaatggtttcagcgacctgatatcaatgacctccggatcgtaccctttgttcacc 26236506 Query: 511 aacgtcttgacggcctgcatcacgtggtacctcatgcgggagtaggtcaggatggtca 568 | |||||| | ||||||||||| |||||||||||||| ||||| || |||||||||| Sbjct: 26236505 agtgtcttggctgcctgcatcacatggtacctcatgcgagagtacgtgaggatggtca 26236448
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 274 bits (138), Expect = 3e-70 Identities = 288/338 (85%) Strand = Plus / Minus Query: 229 gccacgatctgcgcgggctgcacgacggtcgcgtcctccagggtcgcggcgtagggggtc 288 ||||| ||||| || |||||||||||||| || |||||||| | ||| || || || ||| Sbjct: 24710135 gccacaatctgggcaggctgcacgacggtggcatcctccagaggcgcagcatacggcgtc 24710076 Query: 289 ggcacgtcctgcgaagacaggcacacggggcgagtgtccagctcatcccagaagttgtcg 348 ||||| |||||||| |||| ||||| | | | | ||| || | ||||||||||||||| Sbjct: 24710075 ggcacatcctgcgacgacaagcacatgatgggtgcgtcaaggtagtcccagaagttgtcg 24710016 Query: 349 atgatggccgacctcaggctggcgccgatgccgcccgtccgcatgcactcctccacgatc 408 ||||||||||| |||| |||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 24710015 atgatggccgatctcaagctggcgccgatcccgcccgtgcgcatgcactcctccacaatc 24709956 Query: 409 agcacgcggtgggtcttcttgatggagttcccgatggtgtgcaggtcgaacggcttcagc 468 ||||||||||||||||||||||| ||||| || |||||||||||||| || ||||||| | Sbjct: 24709955 agcacgcggtgggtcttcttgatagagttgcctatggtgtgcaggtcaaatggcttcaac 24709896 Query: 469 gacctgatgtcgatcacctccgggtcgtaccccttgttcaccaacgtcttgacggcctgc 528 |||||||||||||| ||||| || || ||||| |||||||||| ||||| | |||||| Sbjct: 24709895 gacctgatgtcgatgacctcgggatcataccctttgttcaccagggtcttcgcagcctgc 24709836 Query: 529 atcacgtggtacctcatgcgggagtaggtcaggatggt 566 ||||| ||||||||||| || ||||| || |||||||| Sbjct: 24709835 atcacatggtacctcatccgcgagtatgtgaggatggt 24709798
>dbj|AK103256.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124A09, full insert sequence Length = 2662 Score = 274 bits (138), Expect = 3e-70 Identities = 288/338 (85%) Strand = Plus / Minus Query: 229 gccacgatctgcgcgggctgcacgacggtcgcgtcctccagggtcgcggcgtagggggtc 288 ||||| ||||| || |||||||||||||| || |||||||| | ||| || || || ||| Sbjct: 2402 gccacaatctgggcaggctgcacgacggtggcatcctccagaggcgcagcatacggcgtc 2343 Query: 289 ggcacgtcctgcgaagacaggcacacggggcgagtgtccagctcatcccagaagttgtcg 348 ||||| |||||||| |||| ||||| | | | | ||| || | ||||||||||||||| Sbjct: 2342 ggcacatcctgcgacgacaagcacatgatgggtgcgtcaaggtagtcccagaagttgtcg 2283 Query: 349 atgatggccgacctcaggctggcgccgatgccgcccgtccgcatgcactcctccacgatc 408 ||||||||||| |||| |||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 2282 atgatggccgatctcaagctggcgccgatcccgcccgtgcgcatgcactcctccacaatc 2223 Query: 409 agcacgcggtgggtcttcttgatggagttcccgatggtgtgcaggtcgaacggcttcagc 468 ||||||||||||||||||||||| ||||| || |||||||||||||| || ||||||| | Sbjct: 2222 agcacgcggtgggtcttcttgatagagttgcctatggtgtgcaggtcaaatggcttcaac 2163 Query: 469 gacctgatgtcgatcacctccgggtcgtaccccttgttcaccaacgtcttgacggcctgc 528 |||||||||||||| ||||| || || ||||| |||||||||| ||||| | |||||| Sbjct: 2162 gacctgatgtcgatgacctcgggatcataccctttgttcaccagggtcttcgcagcctgc 2103 Query: 529 atcacgtggtacctcatgcgggagtaggtcaggatggt 566 ||||| ||||||||||| || ||||| || |||||||| Sbjct: 2102 atcacatggtacctcatccgcgagtatgtgaggatggt 2065
>dbj|AK101464.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040H13, full insert sequence Length = 1406 Score = 274 bits (138), Expect = 3e-70 Identities = 303/358 (84%) Strand = Plus / Minus Query: 211 cagatctcctcgaccgcggccacgatctgcgcgggctgcacgacggtcgcgtcctccagg 270 ||||||| |||||| |||||||| || || || |||||||||||||| ||||||||||| Sbjct: 1253 cagatctgctcgacagcggccacaatttgggcaggctgcacgacggttgcgtcctccaga 1194 Query: 271 gtcgcggcgtagggggtcggcacgtcctgcgaagacaggcacacggggcgagtgtccagc 330 || || || || || ||||| || ||||| || |||| ||||| | | | | || || Sbjct: 1193 gttgcagcatatggcgtcggtacatcctgtgatgacaagcacatgatgggggcatcaagg 1134 Query: 331 tcatcccagaagttgtcgatgatggccgacctcaggctggcgccgatgccgcccgtccgc 390 | ||||||||||| || ||||||||||||||||||||||||||||| || ||||| ||| Sbjct: 1133 tagtcccagaagttatcaatgatggccgacctcaggctggcgccgataccacccgttcgc 1074 Query: 391 atgcactcctccacgatcagcacgcggtgggtcttcttgatggagttcccgatggtgtgc 450 |||||||||||||| ||||| ||||||||||||||||| ||||||||||| || |||||| Sbjct: 1073 atgcactcctccacaatcagaacgcggtgggtcttcttaatggagttccctatcgtgtgc 1014 Query: 451 aggtcgaacggcttcagcgacctgatgtcgatcacctccgggtcgtaccccttgttcacc 510 || ||||| || |||||||||||||| || || |||||||| |||||||| ||||||||| Sbjct: 1013 agatcgaatggtttcagcgacctgatatcaatgacctccggatcgtaccctttgttcacc 954 Query: 511 aacgtcttgacggcctgcatcacgtggtacctcatgcgggagtaggtcaggatggtca 568 | |||||| | ||||||||||| |||||||||||||| ||||| || |||||||||| Sbjct: 953 agtgtcttggctgcctgcatcacatggtacctcatgcgagagtacgtgaggatggtca 896
>dbj|AK069197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008A03, full insert sequence Length = 1178 Score = 274 bits (138), Expect = 3e-70 Identities = 288/338 (85%) Strand = Plus / Minus Query: 229 gccacgatctgcgcgggctgcacgacggtcgcgtcctccagggtcgcggcgtagggggtc 288 ||||| ||||| || |||||||||||||| || |||||||| | ||| || || || ||| Sbjct: 942 gccacaatctgggcaggctgcacgacggtggcatcctccagaggcgcagcatacggcgtc 883 Query: 289 ggcacgtcctgcgaagacaggcacacggggcgagtgtccagctcatcccagaagttgtcg 348 ||||| |||||||| |||| ||||| | | | | ||| || | ||||||||||||||| Sbjct: 882 ggcacatcctgcgacgacaagcacatgatgggtgcgtcaaggtagtcccagaagttgtcg 823 Query: 349 atgatggccgacctcaggctggcgccgatgccgcccgtccgcatgcactcctccacgatc 408 ||||||||||| |||| |||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 822 atgatggccgatctcaagctggcgccgatcccgcccgtgcgcatgcactcctccacaatc 763 Query: 409 agcacgcggtgggtcttcttgatggagttcccgatggtgtgcaggtcgaacggcttcagc 468 ||||||||||||||||||||||| ||||| || |||||||||||||| || ||||||| | Sbjct: 762 agcacgcggtgggtcttcttgatagagttgcctatggtgtgcaggtcaaatggcttcaac 703 Query: 469 gacctgatgtcgatcacctccgggtcgtaccccttgttcaccaacgtcttgacggcctgc 528 |||||||||||||| ||||| || || ||||| |||||||||| ||||| | |||||| Sbjct: 702 gacctgatgtcgatgacctcgggatcataccctttgttcaccagggtcttcgcagcctgc 643 Query: 529 atcacgtggtacctcatgcgggagtaggtcaggatggt 566 ||||| ||||||||||| || ||||| || |||||||| Sbjct: 642 atcacatggtacctcatccgcgagtatgtgaggatggt 605
>dbj|AK063753.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-A03, full insert sequence Length = 1415 Score = 274 bits (138), Expect = 3e-70 Identities = 303/358 (84%) Strand = Plus / Minus Query: 211 cagatctcctcgaccgcggccacgatctgcgcgggctgcacgacggtcgcgtcctccagg 270 ||||||| |||||| |||||||| || || || |||||||||||||| ||||||||||| Sbjct: 1252 cagatctgctcgacagcggccacaatttgggcaggctgcacgacggttgcgtcctccaga 1193 Query: 271 gtcgcggcgtagggggtcggcacgtcctgcgaagacaggcacacggggcgagtgtccagc 330 || || || || || ||||| || ||||| || |||| ||||| | | | | || || Sbjct: 1192 gttgcagcatatggcgtcggtacatcctgtgatgacaagcacatgatgggggcatcaagg 1133 Query: 331 tcatcccagaagttgtcgatgatggccgacctcaggctggcgccgatgccgcccgtccgc 390 | ||||||||||| || ||||||||||||||||||||||||||||| || ||||| ||| Sbjct: 1132 tagtcccagaagttatcaatgatggccgacctcaggctggcgccgataccacccgttcgc 1073 Query: 391 atgcactcctccacgatcagcacgcggtgggtcttcttgatggagttcccgatggtgtgc 450 |||||||||||||| ||||| ||||||||||||||||| ||||||||||| || |||||| Sbjct: 1072 atgcactcctccacaatcagaacgcggtgggtcttcttaatggagttccctatcgtgtgc 1013 Query: 451 aggtcgaacggcttcagcgacctgatgtcgatcacctccgggtcgtaccccttgttcacc 510 || ||||| || |||||||||||||| || || |||||||| |||||||| ||||||||| Sbjct: 1012 agatcgaatggtttcagcgacctgatatcaatgacctccggatcgtaccctttgttcacc 953 Query: 511 aacgtcttgacggcctgcatcacgtggtacctcatgcgggagtaggtcaggatggtca 568 | |||||| | ||||||||||| |||||||||||||| ||||| || |||||||||| Sbjct: 952 agtgtcttggctgcctgcatcacatggtacctcatgcgagagtacgtgaggatggtca 895
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 274 bits (138), Expect = 3e-70 Identities = 303/358 (84%) Strand = Plus / Minus Query: 211 cagatctcctcgaccgcggccacgatctgcgcgggctgcacgacggtcgcgtcctccagg 270 ||||||| |||||| |||||||| || || || |||||||||||||| ||||||||||| Sbjct: 26164981 cagatctgctcgacagcggccacaatttgggcaggctgcacgacggttgcgtcctccaga 26164922 Query: 271 gtcgcggcgtagggggtcggcacgtcctgcgaagacaggcacacggggcgagtgtccagc 330 || || || || || ||||| || ||||| || |||| ||||| | | | | || || Sbjct: 26164921 gttgcagcatatggcgtcggtacatcctgtgatgacaagcacatgatgggggcatcaagg 26164862 Query: 331 tcatcccagaagttgtcgatgatggccgacctcaggctggcgccgatgccgcccgtccgc 390 | ||||||||||| || ||||||||||||||||||||||||||||| || ||||| ||| Sbjct: 26164861 tagtcccagaagttatcaatgatggccgacctcaggctggcgccgataccacccgttcgc 26164802 Query: 391 atgcactcctccacgatcagcacgcggtgggtcttcttgatggagttcccgatggtgtgc 450 |||||||||||||| ||||| ||||||||||||||||| ||||||||||| || |||||| Sbjct: 26164801 atgcactcctccacaatcagaacgcggtgggtcttcttaatggagttccctatcgtgtgc 26164742 Query: 451 aggtcgaacggcttcagcgacctgatgtcgatcacctccgggtcgtaccccttgttcacc 510 || ||||| || |||||||||||||| || || |||||||| |||||||| ||||||||| Sbjct: 26164741 agatcgaatggtttcagcgacctgatatcaatgacctccggatcgtaccctttgttcacc 26164682 Query: 511 aacgtcttgacggcctgcatcacgtggtacctcatgcgggagtaggtcaggatggtca 568 | |||||| | ||||||||||| |||||||||||||| ||||| || |||||||||| Sbjct: 26164681 agtgtcttggctgcctgcatcacatggtacctcatgcgagagtacgtgaggatggtca 26164624
>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133978 Score = 274 bits (138), Expect = 3e-70 Identities = 303/358 (84%) Strand = Plus / Minus Query: 211 cagatctcctcgaccgcggccacgatctgcgcgggctgcacgacggtcgcgtcctccagg 270 ||||||| |||||| |||||||| || || || |||||||||||||| ||||||||||| Sbjct: 789 cagatctgctcgacagcggccacaatttgggcaggctgcacgacggttgcgtcctccaga 730 Query: 271 gtcgcggcgtagggggtcggcacgtcctgcgaagacaggcacacggggcgagtgtccagc 330 || || || || || ||||| || ||||| || |||| ||||| | | | | || || Sbjct: 729 gttgcagcatatggcgtcggtacatcctgtgatgacaagcacatgatgggggcatcaagg 670 Query: 331 tcatcccagaagttgtcgatgatggccgacctcaggctggcgccgatgccgcccgtccgc 390 | ||||||||||| || ||||||||||||||||||||||||||||| || ||||| ||| Sbjct: 669 tagtcccagaagttatcaatgatggccgacctcaggctggcgccgataccacccgttcgc 610 Query: 391 atgcactcctccacgatcagcacgcggtgggtcttcttgatggagttcccgatggtgtgc 450 |||||||||||||| ||||| ||||||||||||||||| ||||||||||| || |||||| Sbjct: 609 atgcactcctccacaatcagaacgcggtgggtcttcttaatggagttccctatcgtgtgc 550 Query: 451 aggtcgaacggcttcagcgacctgatgtcgatcacctccgggtcgtaccccttgttcacc 510 || ||||| || |||||||||||||| || || |||||||| |||||||| ||||||||| Sbjct: 549 agatcgaatggtttcagcgacctgatatcaatgacctccggatcgtaccctttgttcacc 490 Query: 511 aacgtcttgacggcctgcatcacgtggtacctcatgcgggagtaggtcaggatggtca 568 | |||||| | ||||||||||| |||||||||||||| ||||| || |||||||||| Sbjct: 489 agtgtcttggctgcctgcatcacatggtacctcatgcgagagtacgtgaggatggtca 432
>emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388_B05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144241 Score = 274 bits (138), Expect = 3e-70 Identities = 303/358 (84%) Strand = Plus / Minus Query: 211 cagatctcctcgaccgcggccacgatctgcgcgggctgcacgacggtcgcgtcctccagg 270 ||||||| |||||| |||||||| || || || |||||||||||||| ||||||||||| Sbjct: 127043 cagatctgctcgacagcggccacaatttgggcaggctgcacgacggttgcgtcctccaga 126984 Query: 271 gtcgcggcgtagggggtcggcacgtcctgcgaagacaggcacacggggcgagtgtccagc 330 || || || || || ||||| || ||||| || |||| ||||| | | | | || || Sbjct: 126983 gttgcagcatatggcgtcggtacatcctgtgatgacaagcacatgatgggggcatcaagg 126924 Query: 331 tcatcccagaagttgtcgatgatggccgacctcaggctggcgccgatgccgcccgtccgc 390 | ||||||||||| || ||||||||||||||||||||||||||||| || ||||| ||| Sbjct: 126923 tagtcccagaagttatcaatgatggccgacctcaggctggcgccgataccacccgttcgc 126864 Query: 391 atgcactcctccacgatcagcacgcggtgggtcttcttgatggagttcccgatggtgtgc 450 |||||||||||||| ||||| ||||||||||||||||| ||||||||||| || |||||| Sbjct: 126863 atgcactcctccacaatcagaacgcggtgggtcttcttaatggagttccctatcgtgtgc 126804 Query: 451 aggtcgaacggcttcagcgacctgatgtcgatcacctccgggtcgtaccccttgttcacc 510 || ||||| || |||||||||||||| || || |||||||| |||||||| ||||||||| Sbjct: 126803 agatcgaatggtttcagcgacctgatatcaatgacctccggatcgtaccctttgttcacc 126744 Query: 511 aacgtcttgacggcctgcatcacgtggtacctcatgcgggagtaggtcaggatggtca 568 | |||||| | ||||||||||| |||||||||||||| ||||| || |||||||||| Sbjct: 126743 agtgtcttggctgcctgcatcacatggtacctcatgcgagagtacgtgaggatggtca 126686
>gb|BT016687.1| Zea mays clone Contig520 mRNA sequence Length = 1423 Score = 262 bits (132), Expect = 1e-66 Identities = 282/332 (84%) Strand = Plus / Minus Query: 223 accgcggccacgatctgcgcgggctgcacgacggtcgcgtcctccagggtcgcggcgtag 282 ||||| ||||||||||| || || || | ||||| || |||||||| ||||| || || Sbjct: 1211 accgcagccacgatctgggcagggtgggcaacggttgcatcctccagagtcgcagcatat 1152 Query: 283 ggggtcggcacgtcctgcgaagacaggcacacggggcgagtgtccagctcatcccagaag 342 ||||| ||||| ||||| || |||||||||| | | | | ||| || | |||||||| Sbjct: 1151 ggggtaggcacatcctgagatgacaggcacatgatgggggcgtcaaggtagtcccagaaa 1092 Query: 343 ttgtcgatgatggccgacctcaggctggcgccgatgccgcccgtccgcatgcactcctcc 402 ||||||| |||||||||||| ||| |||||||||| || ||||| ||||||||||||||| Sbjct: 1091 ttgtcgacgatggccgacctaagggtggcgccgatcccacccgtgcgcatgcactcctcc 1032 Query: 403 acgatcagcacgcggtgggtcttcttgatggagttcccgatggtgtgcaggtcgaacggc 462 ||||||||||||||||||||||||||||||||||| || || |||||||| || ||||| Sbjct: 1031 acgatcagcacgcggtgggtcttcttgatggagttgccaatagtgtgcagatcaaacggg 972 Query: 463 ttcagcgacctgatgtcgatcacctccgggtcgtaccccttgttcaccaacgtcttgacg 522 |||| ||||||||||||||| ||||| || |||||||| |||||||||| |||||| | Sbjct: 971 ttcaacgacctgatgtcgatgacctcgggatcgtaccctttgttcaccagcgtcttcgct 912 Query: 523 gcctgcatcacgtggtacctcatgcgggagta 554 |||||||||||||||||||||||||| ||||| Sbjct: 911 gcctgcatcacgtggtacctcatgcgcgagta 880
>gb|AY104779.1| Zea mays PCO116203 mRNA sequence Length = 1131 Score = 170 bits (86), Expect = 3e-39 Identities = 131/146 (89%) Strand = Plus / Minus Query: 409 agcacgcggtgggtcttcttgatggagttcccgatggtgtgcaggtcgaacggcttcagc 468 ||||||||||||||||||||||||||||| || || |||||||| || |||||||||| | Sbjct: 1131 agcacgcggtgggtcttcttgatggagttgccaatagtgtgcagatcaaacggcttcaac 1072 Query: 469 gacctgatgtcgatcacctccgggtcgtaccccttgttcaccaacgtcttgacggcctgc 528 |||||||||||||| ||||| || |||||||| |||||||||| |||||| | |||||| Sbjct: 1071 gacctgatgtcgatgacctcgggatcgtaccctttgttcaccagcgtcttcgctgcctgc 1012 Query: 529 atcacgtggtacctcatgcgggagta 554 |||||||||||||||||||| ||||| Sbjct: 1011 atcacgtggtacctcatgcgcgagta 986
>ref|NM_102751.3| Arabidopsis thaliana PDH-E1 BETA (PYRUVATE DEHYDROGENASE E1 BETA); pyruvate dehydrogenase (acetyl-transferring) AT1G30120 (PDH-E1 BETA) mRNA, complete cds Length = 1565 Score = 105 bits (53), Expect = 2e-19 Identities = 143/173 (82%) Strand = Plus / Minus Query: 394 cactcctccacgatcagcacgcggtgggtcttcttgatggagttcccgatggtgtgcagg 453 |||||||||||||||| || || || || ||||| | ||||| || || ||||| ||| Sbjct: 1185 cactcctccacgatcaaaacccgatgtgttttcttcaccgagtttccaattgtgtgaagg 1126 Query: 454 tcgaacggcttcagcgacctgatgtcgatcacctccgggtcgtaccccttgttcaccaac 513 |||||||| ||||| |||||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 1125 tcgaacggtttcagtgacctgatgtcgataacctcggggtcataccctttgttcaccaga 1066 Query: 514 gtcttgacggcctgcatcacgtggtacctcatgcgggagtaggtcaggatggt 566 || || | ||||||||||| ||||||||||| || ||||| || |||||||| Sbjct: 1065 gtttttgctgcctgcatcacatggtacctcattcgcgagtaagtgaggatggt 1013
>gb|U80186.1|ATU80186 Arabidopsis thaliana pyruvate dehydrogenase E1 beta subunit mRNA, nuclear gene encoding plastid protein, complete cds Length = 1441 Score = 105 bits (53), Expect = 2e-19 Identities = 143/173 (82%) Strand = Plus / Minus Query: 394 cactcctccacgatcagcacgcggtgggtcttcttgatggagttcccgatggtgtgcagg 453 |||||||||||||||| || || || || ||||| | ||||| || || ||||| ||| Sbjct: 1037 cactcctccacgatcaaaacccgatgtgttttcttcaccgagtttccaattgtgtgaagg 978 Query: 454 tcgaacggcttcagcgacctgatgtcgatcacctccgggtcgtaccccttgttcaccaac 513 |||||||| ||||| |||||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 977 tcgaacggtttcagtgacctgatgtcgataacctcggggtcataccctttgttcaccaga 918 Query: 514 gtcttgacggcctgcatcacgtggtacctcatgcgggagtaggtcaggatggt 566 || || | ||||||||||| ||||||||||| || ||||| || |||||||| Sbjct: 917 gtttttgctgcctgcatcacatggtacctcattcgcgagtaagtgaggatggt 865
>gb|AY093988.1| Arabidopsis thaliana At1g30120/T2H7_8 mRNA, complete cds Length = 1221 Score = 105 bits (53), Expect = 2e-19 Identities = 143/173 (82%) Strand = Plus / Minus Query: 394 cactcctccacgatcagcacgcggtgggtcttcttgatggagttcccgatggtgtgcagg 453 |||||||||||||||| || || || || ||||| | ||||| || || ||||| ||| Sbjct: 1031 cactcctccacgatcaaaacccgatgtgttttcttcaccgagtttccaattgtgtgaagg 972 Query: 454 tcgaacggcttcagcgacctgatgtcgatcacctccgggtcgtaccccttgttcaccaac 513 |||||||| ||||| |||||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 971 tcgaacggtttcagtgacctgatgtcgataacctcggggtcataccctttgttcaccaga 912 Query: 514 gtcttgacggcctgcatcacgtggtacctcatgcgggagtaggtcaggatggt 566 || || | ||||||||||| ||||||||||| || ||||| || |||||||| Sbjct: 911 gtttttgctgcctgcatcacatggtacctcattcgcgagtaagtgaggatggt 859
>gb|AF361583.1| Arabidopsis thaliana At1g30120/T2H7_8 mRNA, complete cds Length = 1502 Score = 105 bits (53), Expect = 2e-19 Identities = 143/173 (82%) Strand = Plus / Minus Query: 394 cactcctccacgatcagcacgcggtgggtcttcttgatggagttcccgatggtgtgcagg 453 |||||||||||||||| || || || || ||||| | ||||| || || ||||| ||| Sbjct: 1122 cactcctccacgatcaaaacccgatgtgttttcttcaccgagtttccaattgtgtgaagg 1063 Query: 454 tcgaacggcttcagcgacctgatgtcgatcacctccgggtcgtaccccttgttcaccaac 513 |||||||| ||||| |||||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 1062 tcgaacggtttcagtgacctgatgtcgataacctcggggtcataccctttgttcaccaga 1003 Query: 514 gtcttgacggcctgcatcacgtggtacctcatgcgggagtaggtcaggatggt 566 || || | ||||||||||| ||||||||||| || ||||| || |||||||| Sbjct: 1002 gtttttgctgcctgcatcacatggtacctcattcgcgagtaagtgaggatggt 950
>dbj|AK221898.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-28-A12 Length = 1443 Score = 105 bits (53), Expect = 2e-19 Identities = 143/173 (82%) Strand = Plus / Minus Query: 394 cactcctccacgatcagcacgcggtgggtcttcttgatggagttcccgatggtgtgcagg 453 |||||||||||||||| || || || || ||||| | ||||| || || ||||| ||| Sbjct: 1056 cactcctccacgatcaaaacccgatgtgttttcttcaccgagtttccaattgtgtgaagg 997 Query: 454 tcgaacggcttcagcgacctgatgtcgatcacctccgggtcgtaccccttgttcaccaac 513 |||||||| ||||| |||||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 996 tcgaacggtttcagtgacctgatgtcgataacctcggggtcataccctttgttcaccaga 937 Query: 514 gtcttgacggcctgcatcacgtggtacctcatgcgggagtaggtcaggatggt 566 || || | ||||||||||| ||||||||||| || ||||| || |||||||| Sbjct: 936 gtttttgctgcctgcatcacatggtacctcattcgcgagtaagtgaggatggt 884
>emb|BX818442.1|CNS0ACQY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL79ZC08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 614 Score = 105 bits (53), Expect = 2e-19 Identities = 143/173 (82%) Strand = Plus / Minus Query: 394 cactcctccacgatcagcacgcggtgggtcttcttgatggagttcccgatggtgtgcagg 453 |||||||||||||||| || || || || ||||| | ||||| || || ||||| ||| Sbjct: 237 cactcctccacgatcaaaacccgatgtgttttcttcaccgagtttccaattgtgtgaagg 178 Query: 454 tcgaacggcttcagcgacctgatgtcgatcacctccgggtcgtaccccttgttcaccaac 513 |||||||| ||||| |||||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 177 tcgaacggtttcagtgacctgatgtcgataacctcggggtcataccctttgttcaccaga 118 Query: 514 gtcttgacggcctgcatcacgtggtacctcatgcgggagtaggtcaggatggt 566 || || | ||||||||||| ||||||||||| || ||||| || |||||||| Sbjct: 117 gtttttgctgcctgcatcacatggtacctcattcgcgagtaagtgaggatggt 65
>gb|AC074176.5|AC074176 Arabidopsis thaliana chromosome 1 BAC T2H7 genomic sequence, complete sequence Length = 72058 Score = 105 bits (53), Expect = 2e-19 Identities = 143/173 (82%) Strand = Plus / Minus Query: 394 cactcctccacgatcagcacgcggtgggtcttcttgatggagttcccgatggtgtgcagg 453 |||||||||||||||| || || || || ||||| | ||||| || || ||||| ||| Sbjct: 42475 cactcctccacgatcaaaacccgatgtgttttcttcaccgagtttccaattgtgtgaagg 42416 Query: 454 tcgaacggcttcagcgacctgatgtcgatcacctccgggtcgtaccccttgttcaccaac 513 |||||||| ||||| |||||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 42415 tcgaacggtttcagtgacctgatgtcgataacctcggggtcataccctttgttcaccaga 42356 Query: 514 gtcttgacggcctgcatcacgtggtacctcatgcgggagtaggtcaggatggt 566 || || | ||||||||||| ||||||||||| || ||||| || |||||||| Sbjct: 42355 gtttttgctgcctgcatcacatggtacctcattcgcgagtaagtgaggatggt 42303
>gb|AY087733.1| Arabidopsis thaliana clone 38062 mRNA, complete sequence Length = 1562 Score = 105 bits (53), Expect = 2e-19 Identities = 143/173 (82%) Strand = Plus / Minus Query: 394 cactcctccacgatcagcacgcggtgggtcttcttgatggagttcccgatggtgtgcagg 453 |||||||||||||||| || || || || ||||| | ||||| || || ||||| ||| Sbjct: 1185 cactcctccacgatcaaaacccgatgtgttttcttcaccgagtttccaattgtgtgaagg 1126 Query: 454 tcgaacggcttcagcgacctgatgtcgatcacctccgggtcgtaccccttgttcaccaac 513 |||||||| ||||| |||||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 1125 tcgaacggtttcagtgacctgatgtcgataacctcggggtcataccctttgttcaccaga 1066 Query: 514 gtcttgacggcctgcatcacgtggtacctcatgcgggagtaggtcaggatggt 566 || || | ||||||||||| ||||||||||| || ||||| || |||||||| Sbjct: 1065 gtttttgctgcctgcatcacatggtacctcattcgcgagtaagtgaggatggt 1013
>ref|NM_129013.2| Arabidopsis thaliana transketolase AT2G34590 mRNA, complete cds Length = 1491 Score = 77.8 bits (39), Expect = 4e-11 Identities = 144/179 (80%) Strand = Plus / Minus Query: 367 ctggcgccgatgccgcccgtccgcatgcactcctccacgatcagcacgcggtgggtcttc 426 ||||| ||||| || ||||| | ||| || |||||||| |||| || ||||| |||||| Sbjct: 1183 ctggctccgattcctcccgttctcatacattcctccacaatcaaaacccggtgtgtcttc 1124 Query: 427 ttgatggagttcccgatggtgtgcaggtcgaacggcttcagcgacctgatgtcgatcacc 486 || | ||||| || || |||| || || |||||||||| |||||| |||||||| ||| Sbjct: 1123 ttcaccgagtttccaattgtgtagagatcaaacggcttcaacgaccttatgtcgataacc 1064 Query: 487 tccgggtcgtaccccttgttcaccaacgtcttgacggcctgcatcacgtggtacctcat 545 || || || ||||| |||||||||| |||||| | |||||||| || ||||||||||| Sbjct: 1063 tctggatcataccctttgttcaccagcgtctttgcagcctgcattacatggtacctcat 1005
>gb|AY087792.1| Arabidopsis thaliana clone 38439 mRNA, complete sequence Length = 1473 Score = 77.8 bits (39), Expect = 4e-11 Identities = 144/179 (80%) Strand = Plus / Minus Query: 367 ctggcgccgatgccgcccgtccgcatgcactcctccacgatcagcacgcggtgggtcttc 426 ||||| ||||| || ||||| | ||| || |||||||| |||| || ||||| |||||| Sbjct: 1183 ctggctccgattcctcccgttctcatacattcctccacaatcaaaacccggtgtgtcttc 1124 Query: 427 ttgatggagttcccgatggtgtgcaggtcgaacggcttcagcgacctgatgtcgatcacc 486 || | ||||| || || |||| || || |||||||||| |||||| |||||||| ||| Sbjct: 1123 ttcaccgagtttccaattgtgtagagatcaaacggcttcaacgaccttatgtcgataacc 1064 Query: 487 tccgggtcgtaccccttgttcaccaacgtcttgacggcctgcatcacgtggtacctcat 545 || || || ||||| |||||||||| |||||| | |||||||| || ||||||||||| Sbjct: 1063 tctggatcataccctttgttcaccagcgtctttgcagcctgcattacatggtacctcat 1005
>gb|AF167983.1|AF167983 Arabidopsis thaliana putative pyruvate dehydrogenase beta subunit mRNA, complete cds; nuclear gene encoding plastid protein Length = 1511 Score = 77.8 bits (39), Expect = 4e-11 Identities = 144/179 (80%) Strand = Plus / Minus Query: 367 ctggcgccgatgccgcccgtccgcatgcactcctccacgatcagcacgcggtgggtcttc 426 ||||| ||||| || ||||| | ||| || |||||||| |||| || ||||| |||||| Sbjct: 1186 ctggctccgattcctcccgttctcatacattcctccacaatcaaaacccggtgtgtcttc 1127 Query: 427 ttgatggagttcccgatggtgtgcaggtcgaacggcttcagcgacctgatgtcgatcacc 486 || | ||||| || || |||| || || |||||||||| |||||| |||||||| ||| Sbjct: 1126 ttcaccgagtttccaattgtgtagagatcaaacggcttcaacgaccttatgtcgataacc 1067 Query: 487 tccgggtcgtaccccttgttcaccaacgtcttgacggcctgcatcacgtggtacctcat 545 || || || ||||| |||||||||| |||||| | |||||||| || ||||||||||| Sbjct: 1066 tctggatcataccctttgttcaccagcgtctttgcagcctgcattacatggtacctcat 1008
>gb|AF051249.1|AF051249 Picea mariana pyruvate dehydrogenase E1 beta subunit (Sb68) mRNA, partial cds Length = 1047 Score = 73.8 bits (37), Expect = 6e-10 Identities = 184/233 (78%) Strand = Plus / Minus Query: 334 tcccagaagttgtcgatgatggccgacctcaggctggcgccgatgccgcccgtccgcatg 393 ||||||||||| ||||| || || | ||| || || || || ||||| || || |||||| Sbjct: 734 tcccagaagttttcgataattgcagccctgagactagctccaatgccaccagtacgcatg 675 Query: 394 cactcctccacgatcagcacgcggtgggtcttcttgatggagttcccgatggtgtgcagg 453 ||||| || || |||||||| | || |||||||| || || ||||| |||||||||| | Sbjct: 674 cactcttcaacaatcagcactctatgtgtcttctttattgaattccctatggtgtgcaag 615 Query: 454 tcgaacggcttcagcgacctgatgtcgatcacctccgggtcgtaccccttgttcaccaac 513 || || ||||||| || | ||||||||| | ||| || || || ||||||||||| || Sbjct: 614 tcaaatggcttcaaagagcggatgtcgattatctctggatcatatcccttgttcactaaa 555 Query: 514 gtcttgacggcctgcatcacgtggtacctcatgcgggagtaggtcaggatggt 566 ||||| | ||||||||||| ||||| ||||| || || || ||||| ||||| Sbjct: 554 gtctttgctgcctgcatcacatggtatctcatacgagaataagtcagaatggt 502
>dbj|AK104972.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-A07, full insert sequence Length = 397 Score = 71.9 bits (36), Expect = 2e-09 Identities = 111/136 (81%) Strand = Plus / Minus Query: 229 gccacgatctgcgcgggctgcacgacggtcgcgtcctccagggtcgcggcgtagggggtc 288 ||||| ||||| || |||||||||||||| || |||||||| | ||| || || || ||| Sbjct: 137 gccacaatctgggcaggctgcacgacggtggcatcctccagaggcgcagcatacggcgtc 78 Query: 289 ggcacgtcctgcgaagacaggcacacggggcgagtgtccagctcatcccagaagttgtcg 348 ||||| |||||||| |||| ||||| | | | | ||| || | ||||||||||||||| Sbjct: 77 ggcacatcctgcgacgacaagcacatgatgggtgcgtcaaggtagtcccagaagttgtcg 18 Query: 349 atgatggccgacctca 364 ||||||||||| |||| Sbjct: 17 atgatggccgatctca 2
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 249 cacgacggtcgcgtcctccaggg 271 ||||||||||||||||||||||| Sbjct: 461901 cacgacggtcgcgtcctccaggg 461879
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 363 caggctggcgccgatgccgccc 384 |||||||||||||||||||||| Sbjct: 4360319 caggctggcgccgatgccgccc 4360298
>dbj|AB015757.1| Rhodoferax fermentans genes for fumarate reductase subunits, complete cds Length = 3455 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 363 caggctggcgccgatgccgccc 384 |||||||||||||||||||||| Sbjct: 1096 caggctggcgccgatgccgccc 1075
>ref|NM_192202.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1530 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 tgcaggtcgaacggcttcagc 468 ||||||||||||||||||||| Sbjct: 698 tgcaggtcgaacggcttcagc 678
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 397 tcctccacgatcagcacgcgg 417 ||||||||||||||||||||| Sbjct: 1103053 tcctccacgatcagcacgcgg 1103073
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 tgcaggtcgaacggcttcagc 468 ||||||||||||||||||||| Sbjct: 28985179 tgcaggtcgaacggcttcagc 28985159
>dbj|AP003378.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0047E11 Length = 148109 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 tgcaggtcgaacggcttcagc 468 ||||||||||||||||||||| Sbjct: 29537 tgcaggtcgaacggcttcagc 29517
>dbj|AP003254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0454A11 Length = 152240 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 tgcaggtcgaacggcttcagc 468 ||||||||||||||||||||| Sbjct: 97802 tgcaggtcgaacggcttcagc 97782
>dbj|AK119264.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-A04, full insert sequence Length = 1065 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 tgcaggtcgaacggcttcagc 468 ||||||||||||||||||||| Sbjct: 199 tgcaggtcgaacggcttcagc 179
>dbj|AK072715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141G11, full insert sequence Length = 1678 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 tgcaggtcgaacggcttcagc 468 ||||||||||||||||||||| Sbjct: 452 tgcaggtcgaacggcttcagc 432
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 cgcggtgggtcttcttgatg 432 |||||||||||||||||||| Sbjct: 817705 cgcggtgggtcttcttgatg 817686
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 gatctcctcgaccgcggcca 232 |||||||||||||||||||| Sbjct: 1162994 gatctcctcgaccgcggcca 1162975
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 ctgcgcgggctgcacgacgg 256 |||||||||||||||||||| Sbjct: 237774 ctgcgcgggctgcacgacgg 237755
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 ctgcgcgggctgcacgacgg 256 |||||||||||||||||||| Sbjct: 7594090 ctgcgcgggctgcacgacgg 7594109
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 cctcgaccgcggccacgatc 237 |||||||||||||||||||| Sbjct: 6698811 cctcgaccgcggccacgatc 6698830
>gb|AF124755.1|AF124755 Pinus banksiana pyruvate dehydrogenase E1 beta subunit (Sb68) gene, partial cds Length = 517 Score = 40.1 bits (20), Expect = 7.8 Identities = 118/151 (78%) Strand = Plus / Minus Query: 388 cgcatgcactcctccacgatcagcacgcggtgggtcttcttgatggagttcccgatggtg 447 ||||||||||| || || |||||||| | || |||||||| || || ||||| || ||| Sbjct: 151 cgcatgcactcttcaacaatcagcactctatgtgtcttctttattgaattcccaattgtg 92 Query: 448 tgcaggtcgaacggcttcagcgacctgatgtcgatcacctccgggtcgtaccccttgttc 507 |||| ||| || ||||||| || | |||||| || | ||| || || || ||||| ||| Sbjct: 91 tgcaagtcaaatggcttcaaagagcggatgtcaattatctctggatcatatcccttattc 32 Query: 508 accaacgtcttgacggcctgcatcacgtggt 538 || || ||||| | ||||||||||| |||| Sbjct: 31 actaaagtctttgcngcctgcatcacatggt 1
>gb|M31939.1|STMCHOPA Streptomyces sp. cytochrome-P450-like protein (choP) gene and cholesterol oxidase (choA) gene, complete cds Length = 3104 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 cgtcctccagggtcgcggcg 279 |||||||||||||||||||| Sbjct: 381 cgtcctccagggtcgcggcg 362
>dbj|AB017499.1| Oryctolagus cuniculus LRP5 mRNA for Lipoprotein Receptor Related Protein 5, partial cds Length = 1581 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 242 cgggctgcacgacggtcgcgtcctccagggtc 273 |||||||||||| | | ||||||||||||||| Sbjct: 328 cgggctgcacgatgctggcgtcctccagggtc 297 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,306,163 Number of Sequences: 3902068 Number of extensions: 3306163 Number of successful extensions: 81021 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 80394 Number of HSP's gapped (non-prelim): 611 length of query: 577 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 554 effective length of database: 17,143,297,704 effective search space: 9497386928016 effective search space used: 9497386928016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)