>gb|BT008962.1| Triticum aestivum clone wdk1c.pk012.j14:fis, full insert mRNA
            sequence
          Length = 2511

 Score =  321 bits (162), Expect = 1e-84
 Identities = 215/233 (92%)
 Strand = Plus / Minus

                                                                        
Query: 284  gttccgaaaggaagcgacgagcatcgtcgtatggtatcttctctttcgttcttctctcga 343
            ||||||||||||||||||||||||||||  ||| |||||||||||||| | |||||||||
Sbjct: 2093 gttccgaaaggaagcgacgagcatcgtctcatgctatcttctctttcgctgttctctcga 2034

                                                                        
Query: 344  gccggacggggtggtcaaaaatggcgctggcagcttcactgttaatgtcgatatggttgg 403
            | ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 2033 gacggacggggaggtcaaaaatggcgctggcagcttcactgttaatgtcgacatggtcgg 1974

                                                                        
Query: 404  tgcctcggatccgagcagatcagatcgtcctatgagcagaacaacctcctcttcactctc 463
            ||||||||||| |  ||| |||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 1973 tgcctcggatcaggtcaggtcaggtcgtcctatgagcagaacaacctcctcttgactctc 1914

                                                                 
Query: 464  gacgactcctgtacagcttccagagtctncaccaacgaattctgcttcgccac 516
            |||||||||||||||||||||||||||| | |||| |||||||||||||||||
Sbjct: 1913 gacgactcctgtacagcttccagagtctccgccaatgaattctgcttcgccac 1861



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 93/107 (86%), Gaps = 5/107 (4%)
 Strand = Plus / Minus

                                                                        
Query: 9    gcagtgctcctaccatttacatagnacatcatcagttcagcggcaaagcctgacacccgc 68
            ||||||| ||||||||||||| || |||||||||| ||||||| |||||||| ||| |||
Sbjct: 2381 gcagtgcccctaccatttacacag-acatcatcagctcagcggtaaagcctgtcactcgc 2323

                                                           
Query: 69   tgttctttggggtcagtcggtcaaacctcgatggattcgattcccgc 115
            |||||||| ||||||    |||||||||||| |||||| ||||||||
Sbjct: 2322 tgttctttcgggtca----gtcaaacctcgacggattccattcccgc 2280



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/67 (89%), Gaps = 4/67 (5%)
 Strand = Plus / Minus

                                                                        
Query: 118  aaggcagccgcagcagagtattcatcatacactttcggccaacaaaaagcatagcacatt 177
            |||||||||||||||||| ||   ||||||||||||||||| |||||| |||||||| ||
Sbjct: 2252 aaggcagccgcagcagag-at---tcatacactttcggccagcaaaaaacatagcacgtt 2197

                   
Query: 178  gcgctgc 184
            |||||||
Sbjct: 2196 gcgctgc 2190



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 233  gggctcaaaatatgaactaataa 255
            |||||||||||||||||||||||
Sbjct: 2140 gggctcaaaatatgaactaataa 2118

>gb|AY110665.1| Zea mays CL2610_1 mRNA sequence
          Length = 1008

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Plus

                                                                       
Query: 430 gtcctatgagcagaacaacctcctcttcactct---cgacgactcctgtacagcttccag 486
           ||||||||| ||||||| |||| |||| |||||   ||||||||||||||| | ||||||
Sbjct: 564 gtcctatgaacagaacatcctcttcttgactctagacgacgactcctgtacggattccag 623

                      
Query: 487 agtctncacca 497
           ||||| |||||
Sbjct: 624 agtctccacca 634

>ref|XM_483162.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2350

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 467  gactcctgtacagcttccagagtctncaccaacgaattctgcttcgccac 516
            ||||||||||||||||||||||||| ||| | ||  ||||||||| ||||
Sbjct: 2061 gactcctgtacagcttccagagtctccacaagcgctttctgcttcaccac 2012

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 467      gactcctgtacagcttccagagtctncaccaacgaattctgcttcgccac 516
                ||||||||||||||||||||||||| ||| | ||  ||||||||| ||||
Sbjct: 24558139 gactcctgtacagcttccagagtctccacaagcgctttctgcttcaccac 24558090

>dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0026F07
          Length = 137354

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 467   gactcctgtacagcttccagagtctncaccaacgaattctgcttcgccac 516
             ||||||||||||||||||||||||| ||| | ||  ||||||||| ||||
Sbjct: 66399 gactcctgtacagcttccagagtctccacaagcgctttctgcttcaccac 66350

>dbj|AK070235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023046G11, full
            insert sequence
          Length = 2350

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 467  gactcctgtacagcttccagagtctncaccaacgaattctgcttcgccac 516
            ||||||||||||||||||||||||| ||| | ||  ||||||||| ||||
Sbjct: 2061 gactcctgtacagcttccagagtctccacaagcgctttctgcttcaccac 2012

>dbj|AK059604.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-E10, full
            insert sequence
          Length = 1986

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 467  gactcctgtacagcttccagagtctncaccaacgaattctgcttcgccac 516
            ||||||||||||||||||||||||| ||| | ||  ||||||||| ||||
Sbjct: 1398 gactcctgtacagcttccagagtctccacaagcgctttctgcttcaccac 1349

>ref|XM_390849.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10673.1)
            partial mRNA
          Length = 1500

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 444  acaacctcctcttcactctcga 465
            ||||||||||||||||||||||
Sbjct: 1247 acaacctcctcttcactctcga 1226

>gb|AC112499.8| Homo sapiens X BAC RP11-2N21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 136876

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 440   cagaacaacctcctcttcact 460
             |||||||||||||||||||||
Sbjct: 81346 cagaacaacctcctcttcact 81326

>ref|NM_006244.2| Homo sapiens protein phosphatase 2, regulatory subunit B (B56),
           beta isoform (PPP2R5B), mRNA
          Length = 2710

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 215 ggaggaggggctagtggggg 234
           ||||||||||||||||||||
Sbjct: 633 ggaggaggggctagtggggg 614

>ref|XM_732889.1| Plasmodium chabaudi chabaudi hypothetical protein (PC401648.00.0)
           partial mRNA
          Length = 285

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 239 aaaatatgaactaataataa 258
           ||||||||||||||||||||
Sbjct: 30  aaaatatgaactaataataa 11

>emb|AL591845.27| Human DNA sequence from clone RP11-268J15 on chromosome 1 Contains the 3'
              end of a novel gene for thyroid hormone receptor-associated
              protein, 150 kDa subunit (TRAP150) (FLJ22082), a novel
              transcript (FLJ22938), a gene for a novel protein
              (FLJ10647), the 3' end of a gene for Ser/Thr-like kinase
              (MGC4796) and two CpG islands, complete sequence
          Length = 104307

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    ggccaacaaaaagcatagca 173
              ||||||||||||||||||||
Sbjct: 100663 ggccaacaaaaagcatagca 100682

>emb|BX842646.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 1/11
          Length = 349761

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 407    ctcggatccgagcagatcagatcg 430
              ||||||||||| ||||||||||||
Sbjct: 237711 ctcggatccgaacagatcagatcg 237734

>gb|BC045619.1| Homo sapiens protein phosphatase 2, regulatory subunit B (B56),
           beta isoform, mRNA (cDNA clone MGC:39486 IMAGE:5294756),
           complete cds
          Length = 2755

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 215 ggaggaggggctagtggggg 234
           ||||||||||||||||||||
Sbjct: 664 ggaggaggggctagtggggg 645

>emb|CR621212.1| full-length cDNA clone CS0DN003YL01 of Adult brain of Homo sapiens
           (human)
          Length = 2654

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 215 ggaggaggggctagtggggg 234
           ||||||||||||||||||||
Sbjct: 611 ggaggaggggctagtggggg 592

>dbj|AK092730.1| Homo sapiens cDNA FLJ35411 fis, clone SMINT2000232, highly similar
           to SERINE/THREONINE PROTEIN PHOSPHATASE 2A, 56 KDA
           REGULATORY SUBUNIT, BETA ISOFORM
          Length = 1817

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 215 ggaggaggggctagtggggg 234
           ||||||||||||||||||||
Sbjct: 654 ggaggaggggctagtggggg 635

>gb|AC000159.6| Homo sapiens Chromosome 11q13 BAC Clone b79g17, complete sequence
          Length = 108523

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   ggaggaggggctagtggggg 234
             ||||||||||||||||||||
Sbjct: 46910 ggaggaggggctagtggggg 46929

>dbj|AP001187.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-665N17, complete
              sequence
          Length = 171793

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 215    ggaggaggggctagtggggg 234
              ||||||||||||||||||||
Sbjct: 131582 ggaggaggggctagtggggg 131563

>gb|L42374.1|HUMPP2ABA Homo sapiens protein phosphatase 2A B56-beta (PP2A) mRNA, complete
           cds
          Length = 2448

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 215 ggaggaggggctagtggggg 234
           ||||||||||||||||||||
Sbjct: 373 ggaggaggggctagtggggg 354

>dbj|AB209289.1| Homo sapiens mRNA for beta isoform of regulatory subunit B56, protein
            phosphatase 2A variant protein
          Length = 3321

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 215  ggaggaggggctagtggggg 234
            ||||||||||||||||||||
Sbjct: 1248 ggaggaggggctagtggggg 1229


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,474,927
Number of Sequences: 3902068
Number of extensions: 3474927
Number of successful extensions: 56925
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56882
Number of HSP's gapped (non-prelim): 41
length of query: 516
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 493
effective length of database: 17,143,297,704
effective search space: 8451645768072
effective search space used: 8451645768072
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)