>ref|XM_466044.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2817

 Score = 65.9 bits (33), Expect = 1e-08
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 21   cccttcagttcctctaggaggatatcaagaattgctagcatctgagttt 69
            ||||||| ||| | ||||| |||||||||||||||||||||||||||||
Sbjct: 2546 cccttcacttcttgtaggatgatatcaagaattgctagcatctgagttt 2498

>gb|AY166599.1| Oryza sativa (indica cultivar-group) ATP-dependent Clp protease
            ATP-binding subunit precursor (CLPD1) mRNA, complete cds;
            nuclear gene for chloroplast product
          Length = 3142

 Score = 65.9 bits (33), Expect = 1e-08
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 21   cccttcagttcctctaggaggatatcaagaattgctagcatctgagttt 69
            ||||||| ||| | ||||| |||||||||||||||||||||||||||||
Sbjct: 2651 cccttcacttcttgtaggatgatatcaagaattgctagcatctgagttt 2603

>dbj|AK068727.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159L15, full
            insert sequence
          Length = 2619

 Score = 65.9 bits (33), Expect = 1e-08
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 21   cccttcagttcctctaggaggatatcaagaattgctagcatctgagttt 69
            ||||||| ||| | ||||| |||||||||||||||||||||||||||||
Sbjct: 2199 cccttcacttcttgtaggatgatatcaagaattgctagcatctgagttt 2151

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 56.0 bits (28), Expect = 1e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                            
Query: 21       cccttcagttcctctaggaggatatcaagaattgctagcatctg 64
                ||||||| ||| | ||||| ||||||||||||||||||||||||
Sbjct: 19275207 cccttcacttcttgtaggatgatatcaagaattgctagcatctg 19275164

>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0458B05
          Length = 144917

 Score = 56.0 bits (28), Expect = 1e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                         
Query: 21    cccttcagttcctctaggaggatatcaagaattgctagcatctg 64
             ||||||| ||| | ||||| ||||||||||||||||||||||||
Sbjct: 43005 cccttcacttcttgtaggatgatatcaagaattgctagcatctg 42962

>gb|AY108078.1| Zea mays PCO134480 mRNA sequence
          Length = 1046

 Score = 48.1 bits (24), Expect = 0.003
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 20  gcccttcagttcctctaggaggatatcaagaattgctagcatctgagt 67
           |||||| | ||||| ||||| |||||||||||| || |||||||||||
Sbjct: 477 gcccttgacttcctttaggatgatatcaagaatggccagcatctgagt 430

>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 38.2 bits (19), Expect = 2.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 14      gagcttgcccttcagttcc 32
               |||||||||||||||||||
Sbjct: 1641995 gagcttgcccttcagttcc 1641977

>gb|AC144479.1| Pan troglodytes BAC clone RP43-126P12 from 7, complete sequence
          Length = 211515

 Score = 38.2 bits (19), Expect = 2.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 51     attgctagcatctgagttt 69
              |||||||||||||||||||
Sbjct: 177672 attgctagcatctgagttt 177690

>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 38.2 bits (19), Expect = 2.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 14      gagcttgcccttcagttcc 32
               |||||||||||||||||||
Sbjct: 3884902 gagcttgcccttcagttcc 3884884

>emb|BX842631.1| Neurospora crassa DNA linkage group I BAC contig B1O14
          Length = 119219

 Score = 38.2 bits (19), Expect = 2.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 23    cttcagttcctctaggagg 41
             |||||||||||||||||||
Sbjct: 60330 cttcagttcctctaggagg 60348

>gb|AC093020.6| Mus Musculus Strain C57BL6/J Chromosome 14 BAC Clone RP23-358B23,
              complete sequence
          Length = 206396

 Score = 38.2 bits (19), Expect = 2.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 34     ctaggaggatatcaagaat 52
              |||||||||||||||||||
Sbjct: 159805 ctaggaggatatcaagaat 159823

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 38.2 bits (19), Expect = 2.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 14      gagcttgcccttcagttcc 32
               |||||||||||||||||||
Sbjct: 5331017 gagcttgcccttcagttcc 5330999

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 38.2 bits (19), Expect = 2.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 14      gagcttgcccttcagttcc 32
               |||||||||||||||||||
Sbjct: 1660877 gagcttgcccttcagttcc 1660895

>gb|AC000110.1|HSAC000110 Human Cosmid g0771a233, complete sequence
          Length = 45508

 Score = 38.2 bits (19), Expect = 2.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 51    attgctagcatctgagttt 69
             |||||||||||||||||||
Sbjct: 28938 attgctagcatctgagttt 28920


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 514,422
Number of Sequences: 3902068
Number of extensions: 514422
Number of successful extensions: 34194
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34137
Number of HSP's gapped (non-prelim): 57
length of query: 69
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 48
effective length of database: 17,151,101,840
effective search space: 823252888320
effective search space used: 823252888320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)