| Clone Name | rbags7l09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|D45076.1|PNIAA Panicum miliaceum mRNA for plastidic aspartate aminotransferase , complete cds Length = 1681 Score = 373 bits (188), Expect = e-100 Identities = 394/463 (85%) Strand = Plus / Minus Query: 184 atctagttgacattgtggaaggagtcgatgatggcatcagcaaggtactcgcatttcgcc 243 |||||| |||||||||||||||| ||||||||||| || ||||| || ||||| || ||| Sbjct: 1439 atctagctgacattgtggaaggaatcgatgatggcgtcggcaagataatcgcacttagcc 1380 Query: 244 aggttcagccctgccaacgaaatcctcccgtccttggtcatatatatgtgccatttatcg 303 ||| || || || |||||||||| ||| |||||||||||||| | ||||||||||| Sbjct: 1379 agggaaagtccagctaacgaaatccgcccatccttggtcatataaacatgccatttatct 1320 Query: 304 gtcatgttatcgctctgggttctgttcaagcccgtgaaggagaacatgcctatctggcta 363 ||||||||||| ||||| | | |||||||||| ||| ||||||||||||| ||||| || Sbjct: 1319 gtcatgttatcactctgtgctttgttcaagccagtgtaggagaacatgccaatctgtctc 1260 Query: 364 agaatgaaagaccagtccttgccagactggtcctttgcagtcaagctatcgtaaagcttc 423 |||||||||||||||||||||||| || ||||||||||| ||| |||||||| |||||| Sbjct: 1259 agaatgaaagaccagtccttgccactcttgtcctttgcagacaaactatcgtagagcttc 1200 Query: 424 tgccgaacattcttgatccgccctgccatttgttccatctcttctttccactcaccgaac 483 |||| ||||||||||||||||||||||||||||||||||| | ||||| ||||| ||| Sbjct: 1199 tgccttacattcttgatccgccctgccatttgttccatctcctgcttccattcaccaaac 1140 Query: 484 atggtagggtctccaacaacgttggcgacgatcttggcaccgtgaataggtgggtttgag 543 || || || || ||||||| ||||| || ||| | |||||||||||||| ||||| ||| Sbjct: 1139 atagttggatcaccaacaatattggcaactatcctagcaccgtgaataggggggttcgag 1080 Query: 544 tacatgggccgcgccaatcgcttcaactggctcttcaccctatctgcaacttncggtgct 603 |||||||| || |||| || |||| ||||||||| |||||||||||||||| |||||| Sbjct: 1079 tacatgggacgtgccagacgtttcagctggctctttaccctatctgcaacttctggtgct 1020 Query: 604 gtgcaaatgacatttatcgcaccgatcctttctgcatatagac 646 | ||||| |||||||| || || ||||||||||||||||||| Sbjct: 1019 gagcaaacaacatttattgccccaatcctttctgcatatagac 977 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 108 agctggaaggacccaaaaatcccagc 133 |||||||||||||||||||||||||| Sbjct: 1517 agctggaaggacccaaaaatcccagc 1492
>ref|XM_468277.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1681 Score = 369 bits (186), Expect = 8e-99 Identities = 380/445 (85%) Strand = Plus / Minus Query: 199 tggaaggagtcgatgatggcatcagcaaggtactcgcatttcgccaggttcagccctgcc 258 |||||||||||||||||||| ||||| |||||||||||||| |||||| || || ||| Sbjct: 1425 tggaaggagtcgatgatggcgtcagctaggtactcgcatttagccagggacaatccagcc 1366 Query: 259 aacgaaatcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcgctc 318 |||||||| ||||| ||||| ||||| |||||||||||||| |||||||| ||||| ||| Sbjct: 1365 aacgaaattctcccatcctttgtcatgtatatgtgccatttgtcggtcatattatcactc 1306 Query: 319 tgggttctgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaagaccag 378 || ||| |||||||||||||| ||||||||||||||||||| || ||||||||||||||| Sbjct: 1305 tgagttttgttcaagcccgtgtaggagaacatgcctatctgcctcagaatgaaagaccag 1246 Query: 379 tccttgccagactggtcctttgcagtcaagctatcgtaaagcttctgccgaacattcttg 438 ||||||||| | ||||||||||| ||| ||||| ||||||||||| | ||||||||| Sbjct: 1245 tccttgccactgtcgtcctttgcagacaaactatcataaagcttctgtcttacattcttg 1186 Query: 439 atccgccctgccatttgttccatctcttctttccactcaccgaacatggtagggtctcca 498 || ||||||||||||| ||||||||| | |||||| ||||| |||||||| || || ||| Sbjct: 1185 atacgccctgccatttcttccatctcctgtttccattcaccaaacatggttggatcccca 1126 Query: 499 acaacgttggcgacgatcttggcaccgtgaataggtgggtttgagtacatgggccgcgcc 558 ||||||||||| || ||| | ||||| |||||||| || || || ||||||||||| ||| Sbjct: 1125 acaacgttggcaactatcctagcaccatgaatagggggattcgaatacatgggccgtgcc 1066 Query: 559 aatcgcttcaactggctcttcaccctatctgcaacttncggtgctgtgcaaatgacattt 618 ||||| |||| ||||||||||||||| | ||| |||| |||| || ||| | |||||| Sbjct: 1065 aatcgtttcagctggctcttcaccctgtttgcgacttcaggtgttgagcagacaacattt 1006 Query: 619 atcgcaccgatcctttctgcatata 643 || || || || ||||||||||||| Sbjct: 1005 attgctccaattctttctgcatata 981 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 102 aactcgagctggaaggacccaaaaatcccagca 134 ||||| ||||||||||| ||||||||||||||| Sbjct: 1513 aactcaagctggaaggaaccaaaaatcccagca 1481
>ref|XM_507029.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1004_E04.34 mRNA Length = 1866 Score = 369 bits (186), Expect = 8e-99 Identities = 380/445 (85%) Strand = Plus / Minus Query: 199 tggaaggagtcgatgatggcatcagcaaggtactcgcatttcgccaggttcagccctgcc 258 |||||||||||||||||||| ||||| |||||||||||||| |||||| || || ||| Sbjct: 1610 tggaaggagtcgatgatggcgtcagctaggtactcgcatttagccagggacaatccagcc 1551 Query: 259 aacgaaatcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcgctc 318 |||||||| ||||| ||||| ||||| |||||||||||||| |||||||| ||||| ||| Sbjct: 1550 aacgaaattctcccatcctttgtcatgtatatgtgccatttgtcggtcatattatcactc 1491 Query: 319 tgggttctgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaagaccag 378 || ||| |||||||||||||| ||||||||||||||||||| || ||||||||||||||| Sbjct: 1490 tgagttttgttcaagcccgtgtaggagaacatgcctatctgcctcagaatgaaagaccag 1431 Query: 379 tccttgccagactggtcctttgcagtcaagctatcgtaaagcttctgccgaacattcttg 438 ||||||||| | ||||||||||| ||| ||||| ||||||||||| | ||||||||| Sbjct: 1430 tccttgccactgtcgtcctttgcagacaaactatcataaagcttctgtcttacattcttg 1371 Query: 439 atccgccctgccatttgttccatctcttctttccactcaccgaacatggtagggtctcca 498 || ||||||||||||| ||||||||| | |||||| ||||| |||||||| || || ||| Sbjct: 1370 atacgccctgccatttcttccatctcctgtttccattcaccaaacatggttggatcccca 1311 Query: 499 acaacgttggcgacgatcttggcaccgtgaataggtgggtttgagtacatgggccgcgcc 558 ||||||||||| || ||| | ||||| |||||||| || || || ||||||||||| ||| Sbjct: 1310 acaacgttggcaactatcctagcaccatgaatagggggattcgaatacatgggccgtgcc 1251 Query: 559 aatcgcttcaactggctcttcaccctatctgcaacttncggtgctgtgcaaatgacattt 618 ||||| |||| ||||||||||||||| | ||| |||| |||| || ||| | |||||| Sbjct: 1250 aatcgtttcagctggctcttcaccctgtttgcgacttcaggtgttgagcagacaacattt 1191 Query: 619 atcgcaccgatcctttctgcatata 643 || || || || ||||||||||||| Sbjct: 1190 attgctccaattctttctgcatata 1166 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 102 aactcgagctggaaggacccaaaaatcccagca 134 ||||| ||||||||||| ||||||||||||||| Sbjct: 1698 aactcaagctggaaggaaccaaaaatcccagca 1666
>gb|AY157306.1| Oryza sativa aspartate aminotransferase mRNA, partial cds; nuclear gene for plastid product Length = 1261 Score = 369 bits (186), Expect = 8e-99 Identities = 380/445 (85%) Strand = Plus / Minus Query: 199 tggaaggagtcgatgatggcatcagcaaggtactcgcatttcgccaggttcagccctgcc 258 |||||||||||||||||||| ||||| |||||||||||||| |||||| || || ||| Sbjct: 1234 tggaaggagtcgatgatggcgtcagctaggtactcgcatttagccagggacaatccagcc 1175 Query: 259 aacgaaatcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcgctc 318 |||||||| ||||| ||||| ||||| |||||||||||||| |||||||| ||||| ||| Sbjct: 1174 aacgaaattctcccatcctttgtcatgtatatgtgccatttgtcggtcatattatcactc 1115 Query: 319 tgggttctgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaagaccag 378 || ||| |||||||||||||| ||||||||||||||||||| || ||||||||||||||| Sbjct: 1114 tgagttttgttcaagcccgtgtaggagaacatgcctatctgcctcagaatgaaagaccag 1055 Query: 379 tccttgccagactggtcctttgcagtcaagctatcgtaaagcttctgccgaacattcttg 438 ||||||||| | ||||||||||| ||| ||||| ||||||||||| | ||||||||| Sbjct: 1054 tccttgccactgtcgtcctttgcagacaaactatcataaagcttctgtcttacattcttg 995 Query: 439 atccgccctgccatttgttccatctcttctttccactcaccgaacatggtagggtctcca 498 || ||||||||||||| ||||||||| | |||||| ||||| |||||||| || || ||| Sbjct: 994 atacgccctgccatttcttccatctcctgtttccattcaccaaacatggttggatcccca 935 Query: 499 acaacgttggcgacgatcttggcaccgtgaataggtgggtttgagtacatgggccgcgcc 558 ||||||||||| || ||| | ||||| |||||||| || || || ||||||||||| ||| Sbjct: 934 acaacgttggcaactatcctagcaccatgaatagggggattcgaatacatgggccgtgcc 875 Query: 559 aatcgcttcaactggctcttcaccctatctgcaacttncggtgctgtgcaaatgacattt 618 ||||| |||| ||||||||||||||| | ||| |||| |||| || ||| | |||||| Sbjct: 874 aatcgtttcagctggctcttcaccctgtttgcgacttcaggtgttgagcagacaacattt 815 Query: 619 atcgcaccgatcctttctgcatata 643 || || || || ||||||||||||| Sbjct: 814 attgctccaattctttctgcatata 790
>dbj|AK105059.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-G01, full insert sequence Length = 1681 Score = 369 bits (186), Expect = 8e-99 Identities = 380/445 (85%) Strand = Plus / Minus Query: 199 tggaaggagtcgatgatggcatcagcaaggtactcgcatttcgccaggttcagccctgcc 258 |||||||||||||||||||| ||||| |||||||||||||| |||||| || || ||| Sbjct: 1425 tggaaggagtcgatgatggcgtcagctaggtactcgcatttagccagggacaatccagcc 1366 Query: 259 aacgaaatcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcgctc 318 |||||||| ||||| ||||| ||||| |||||||||||||| |||||||| ||||| ||| Sbjct: 1365 aacgaaattctcccatcctttgtcatgtatatgtgccatttgtcggtcatattatcactc 1306 Query: 319 tgggttctgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaagaccag 378 || ||| |||||||||||||| ||||||||||||||||||| || ||||||||||||||| Sbjct: 1305 tgagttttgttcaagcccgtgtaggagaacatgcctatctgcctcagaatgaaagaccag 1246 Query: 379 tccttgccagactggtcctttgcagtcaagctatcgtaaagcttctgccgaacattcttg 438 ||||||||| | ||||||||||| ||| ||||| ||||||||||| | ||||||||| Sbjct: 1245 tccttgccactgtcgtcctttgcagacaaactatcataaagcttctgtcttacattcttg 1186 Query: 439 atccgccctgccatttgttccatctcttctttccactcaccgaacatggtagggtctcca 498 || ||||||||||||| ||||||||| | |||||| ||||| |||||||| || || ||| Sbjct: 1185 atacgccctgccatttcttccatctcctgtttccattcaccaaacatggttggatcccca 1126 Query: 499 acaacgttggcgacgatcttggcaccgtgaataggtgggtttgagtacatgggccgcgcc 558 ||||||||||| || ||| | ||||| |||||||| || || || ||||||||||| ||| Sbjct: 1125 acaacgttggcaactatcctagcaccatgaatagggggattcgaatacatgggccgtgcc 1066 Query: 559 aatcgcttcaactggctcttcaccctatctgcaacttncggtgctgtgcaaatgacattt 618 ||||| |||| ||||||||||||||| | ||| |||| |||| || ||| | |||||| Sbjct: 1065 aatcgtttcagctggctcttcaccctgtttgcgacttcaggtgttgagcagacaacattt 1006 Query: 619 atcgcaccgatcctttctgcatata 643 || || || || ||||||||||||| Sbjct: 1005 attgctccaattctttctgcatata 981 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 102 aactcgagctggaaggacccaaaaatcccagca 134 ||||| ||||||||||| ||||||||||||||| Sbjct: 1513 aactcaagctggaaggaaccaaaaatcccagca 1481
>dbj|AK072426.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091M09, full insert sequence Length = 1864 Score = 369 bits (186), Expect = 8e-99 Identities = 380/445 (85%) Strand = Plus / Minus Query: 199 tggaaggagtcgatgatggcatcagcaaggtactcgcatttcgccaggttcagccctgcc 258 |||||||||||||||||||| ||||| |||||||||||||| |||||| || || ||| Sbjct: 1608 tggaaggagtcgatgatggcgtcagctaggtactcgcatttagccagggacaatccagcc 1549 Query: 259 aacgaaatcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcgctc 318 |||||||| ||||| ||||| ||||| |||||||||||||| |||||||| ||||| ||| Sbjct: 1548 aacgaaattctcccatcctttgtcatgtatatgtgccatttgtcggtcatattatcactc 1489 Query: 319 tgggttctgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaagaccag 378 || ||| |||||||||||||| ||||||||||||||||||| || ||||||||||||||| Sbjct: 1488 tgagttttgttcaagcccgtgtaggagaacatgcctatctgcctcagaatgaaagaccag 1429 Query: 379 tccttgccagactggtcctttgcagtcaagctatcgtaaagcttctgccgaacattcttg 438 ||||||||| | ||||||||||| ||| ||||| ||||||||||| | ||||||||| Sbjct: 1428 tccttgccactgtcgtcctttgcagacaaactatcataaagcttctgtcttacattcttg 1369 Query: 439 atccgccctgccatttgttccatctcttctttccactcaccgaacatggtagggtctcca 498 || ||||||||||||| ||||||||| | |||||| ||||| |||||||| || || ||| Sbjct: 1368 atacgccctgccatttcttccatctcctgtttccattcaccaaacatggttggatcccca 1309 Query: 499 acaacgttggcgacgatcttggcaccgtgaataggtgggtttgagtacatgggccgcgcc 558 ||||||||||| || ||| | ||||| |||||||| || || || ||||||||||| ||| Sbjct: 1308 acaacgttggcaactatcctagcaccatgaatagggggattcgaatacatgggccgtgcc 1249 Query: 559 aatcgcttcaactggctcttcaccctatctgcaacttncggtgctgtgcaaatgacattt 618 ||||| |||| ||||||||||||||| | ||| |||| |||| || ||| | |||||| Sbjct: 1248 aatcgtttcagctggctcttcaccctgtttgcgacttcaggtgttgagcagacaacattt 1189 Query: 619 atcgcaccgatcctttctgcatata 643 || || || || ||||||||||||| Sbjct: 1188 attgctccaattctttctgcatata 1164 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 102 aactcgagctggaaggacccaaaaatcccagca 134 ||||| ||||||||||| ||||||||||||||| Sbjct: 1696 aactcaagctggaaggaaccaaaaatcccagca 1664
>gb|AY105250.1| Zea mays PCO107699 mRNA sequence Length = 1832 Score = 339 bits (171), Expect = 7e-90 Identities = 380/450 (84%) Strand = Plus / Minus Query: 186 ctagttgacattgtggaaggagtcgatgatggcatcagcaaggtactcgcatttcgccag 245 |||||| ||||| |||||||| ||||||||||| || ||||| || || || || ||||| Sbjct: 1592 ctagttcacattatggaaggaatcgatgatggcgtcggcaagataatcacacttagccag 1533 Query: 246 gttcagccctgccaacgaaatcctcccgtccttggtcatatatatgtgccatttatcggt 305 | |||||| || ||||| |||| ||| ||||||||||| || || ||||||||||| || Sbjct: 1532 ggacagcccagctaacgagatccgcccatccttggtcatgtaaatatgccatttatccgt 1473 Query: 306 catgttatcgctctgggttctgttcaagcccgtgaaggagaacatgcctatctggctaag 365 |||||| || ||||| | | |||||||||| ||| ||||||||||||| ||||| || || Sbjct: 1472 catgttgtcactctgcgctttgttcaagccggtgtaggagaacatgccaatctgcctcag 1413 Query: 366 aatgaaagaccagtccttgccagactggtcctttgcagtcaagctatcgtaaagcttctg 425 ||||||||||||||||||||| || |||||| |||| ||| || ||||| |||||||| Sbjct: 1412 aatgaaagaccagtccttgccgctcttgtccttggcagacaaactgtcgtagagcttctg 1353 Query: 426 ccgaacattcttgatccgccctgccatttgttccatctcttctttccactcaccgaacat 485 | |||||||||||||| || |||||| | |||||||||| |||||| ||||| ||||| Sbjct: 1352 tcttacattcttgatccgtccagccattagctccatctcttgtttccattcaccaaacat 1293 Query: 486 ggtagggtctccaacaacgttggcgacgatcttggcaccgtgaataggtgggtttgagta 545 ||| || || |||||||||||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 1292 ggttggatcaccaacaacgttggcaactatcttggcaccgtgaataggggggttcgagta 1233 Query: 546 catgggccgcgccaatcgcttcaactggctcttcaccctatctgcaacttncggtgctgt 605 |||||| || |||||||| |||| ||||||||| |||||||||||||||| ||||||| Sbjct: 1232 catgggacgtgccaatcgtttcagctggctctttaccctatctgcaacttctggtgctga 1173 Query: 606 gcaaatgacatttatcgcaccgatcctttc 635 ||| | ||||||||| ||||| | |||||| Sbjct: 1172 gcacacgacatttattgcaccaaccctttc 1143 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 108 agctggaaggacccaaaaatcccagc 133 |||||||||||||||||||||||||| Sbjct: 1674 agctggaaggacccaaaaatcccagc 1649
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 244 bits (123), Expect = 3e-61 Identities = 225/259 (86%) Strand = Plus / Minus Query: 326 tgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaagaccagtccttgc 385 |||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 33964357 tgttcaagcccgtgtaggagaacatgcctatctgcctcagaatgaaagaccagtccttgc 33964298 Query: 386 cagactggtcctttgcagtcaagctatcgtaaagcttctgccgaacattcttgatccgcc 445 || | ||||||||||| ||| ||||| ||||||||||| | ||||||||||| |||| Sbjct: 33964297 cactgtcgtcctttgcagacaaactatcataaagcttctgtcttacattcttgatacgcc 33964238 Query: 446 ctgccatttgttccatctcttctttccactcaccgaacatggtagggtctccaacaacgt 505 ||||||||| ||||||||| | |||||| ||||| |||||||| || || |||||||||| Sbjct: 33964237 ctgccatttcttccatctcctgtttccattcaccaaacatggttggatccccaacaacgt 33964178 Query: 506 tggcgacgatcttggcaccgtgaataggtgggtttgagtacatgggccgcgccaatcgct 565 |||| || ||| | ||||| |||||||| || || || ||||||||||| |||||||| | Sbjct: 33964177 tggcaactatcctagcaccatgaatagggggattcgaatacatgggccgtgccaatcgtt 33964118 Query: 566 tcaactggctcttcaccct 584 ||| ||||||||||||||| Sbjct: 33964117 tcagctggctcttcaccct 33964099 Score = 123 bits (62), Expect = 8e-25 Identities = 107/122 (87%) Strand = Plus / Minus Query: 199 tggaaggagtcgatgatggcatcagcaaggtactcgcatttcgccaggttcagccctgcc 258 |||||||||||||||||||| ||||| |||||||||||||| |||||| || || ||| Sbjct: 33964625 tggaaggagtcgatgatggcgtcagctaggtactcgcatttagccagggacaatccagcc 33964566 Query: 259 aacgaaatcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcgctc 318 |||||||| ||||| ||||| ||||| |||||||||||||| |||||||| ||||| ||| Sbjct: 33964565 aacgaaattctcccatcctttgtcatgtatatgtgccatttgtcggtcatattatcactc 33964506 Query: 319 tg 320 || Sbjct: 33964505 tg 33964504 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 102 aactcgagctggaaggacccaaaaatcccagca 134 ||||| ||||||||||| ||||||||||||||| Sbjct: 33964713 aactcaagctggaaggaaccaaaaatcccagca 33964681
>dbj|AP003975.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_E04 Length = 133621 Score = 244 bits (123), Expect = 3e-61 Identities = 225/259 (86%) Strand = Plus / Minus Query: 326 tgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaagaccagtccttgc 385 |||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 123320 tgttcaagcccgtgtaggagaacatgcctatctgcctcagaatgaaagaccagtccttgc 123261 Query: 386 cagactggtcctttgcagtcaagctatcgtaaagcttctgccgaacattcttgatccgcc 445 || | ||||||||||| ||| ||||| ||||||||||| | ||||||||||| |||| Sbjct: 123260 cactgtcgtcctttgcagacaaactatcataaagcttctgtcttacattcttgatacgcc 123201 Query: 446 ctgccatttgttccatctcttctttccactcaccgaacatggtagggtctccaacaacgt 505 ||||||||| ||||||||| | |||||| ||||| |||||||| || || |||||||||| Sbjct: 123200 ctgccatttcttccatctcctgtttccattcaccaaacatggttggatccccaacaacgt 123141 Query: 506 tggcgacgatcttggcaccgtgaataggtgggtttgagtacatgggccgcgccaatcgct 565 |||| || ||| | ||||| |||||||| || || || ||||||||||| |||||||| | Sbjct: 123140 tggcaactatcctagcaccatgaatagggggattcgaatacatgggccgtgccaatcgtt 123081 Query: 566 tcaactggctcttcaccct 584 ||| ||||||||||||||| Sbjct: 123080 tcagctggctcttcaccct 123062 Score = 123 bits (62), Expect = 8e-25 Identities = 107/122 (87%) Strand = Plus / Minus Query: 199 tggaaggagtcgatgatggcatcagcaaggtactcgcatttcgccaggttcagccctgcc 258 |||||||||||||||||||| ||||| |||||||||||||| |||||| || || ||| Sbjct: 123588 tggaaggagtcgatgatggcgtcagctaggtactcgcatttagccagggacaatccagcc 123529 Query: 259 aacgaaatcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcgctc 318 |||||||| ||||| ||||| ||||| |||||||||||||| |||||||| ||||| ||| Sbjct: 123528 aacgaaattctcccatcctttgtcatgtatatgtgccatttgtcggtcatattatcactc 123469 Query: 319 tg 320 || Sbjct: 123468 tg 123467 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 102 aactcgagctggaaggacccaaaaatcccagca 134 ||||| ||||||||||| ||||||||||||||| Sbjct: 123676 aactcaagctggaaggaaccaaaaatcccagca 123644
>gb|AY081506.1| Arabidopsis thaliana aspartate aminotransferase (At4g31990) mRNA, complete cds Length = 1447 Score = 109 bits (55), Expect = 1e-20 Identities = 148/179 (82%) Strand = Plus / Minus Query: 205 gagtcgatgatggcatcagcaaggtactcgcatttcgccaggttcagccctgccaacgaa 264 ||||||||||| ||||||||||| ||||||||||| ||||| | || ||||| || Sbjct: 1343 gagtcgatgatcgcatcagcaagatactcgcatttggccagagataatccggccaatgat 1284 Query: 265 atcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcgctctgggtt 324 ||||||||||| || |||||||| | ||||||||| || ||||||||||||||||| | | Sbjct: 1283 atcctcccgtctttagtcatatacacgtgccatttgtccgtcatgttatcgctctgagct 1224 Query: 325 ctgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaagaccagtcctt 383 |||| | ||| ||||| ||||||||||| || || | |||||||| ||||||||||| Sbjct: 1223 ttgtttaggccggtgaaagagaacatgccaatttgcttcagaatgaaggaccagtcctt 1165
>gb|AY054660.1| Arabidopsis thaliana aspartate aminotransferase (At4g31990; F10N7.200) mRNA, complete cds Length = 1705 Score = 109 bits (55), Expect = 1e-20 Identities = 148/179 (82%) Strand = Plus / Minus Query: 205 gagtcgatgatggcatcagcaaggtactcgcatttcgccaggttcagccctgccaacgaa 264 ||||||||||| ||||||||||| ||||||||||| ||||| | || ||||| || Sbjct: 1553 gagtcgatgatcgcatcagcaagatactcgcatttggccagagataatccggccaatgat 1494 Query: 265 atcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcgctctgggtt 324 ||||||||||| || |||||||| | ||||||||| || ||||||||||||||||| | | Sbjct: 1493 atcctcccgtctttagtcatatacacgtgccatttgtccgtcatgttatcgctctgagct 1434 Query: 325 ctgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaagaccagtcctt 383 |||| | ||| ||||| ||||||||||| || || | |||||||| ||||||||||| Sbjct: 1433 ttgtttaggccggtgaaagagaacatgccaatttgcttcagaatgaaggaccagtcctt 1375
>ref|NM_119351.2| Arabidopsis thaliana ASP5 (ASPARTATE AMINOTRANSFERASE 5) AT4G31990 (ASP5) transcript variant AT4G31990.1 mRNA, complete cds Length = 1836 Score = 101 bits (51), Expect = 3e-18 Identities = 147/179 (82%) Strand = Plus / Minus Query: 205 gagtcgatgatggcatcagcaaggtactcgcatttcgccaggttcagccctgccaacgaa 264 ||||||||||| ||||||||||| ||||||||||| ||||| | || ||||| || Sbjct: 1560 gagtcgatgatcgcatcagcaagatactcgcatttggccagagataatccggccaatgat 1501 Query: 265 atcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcgctctgggtt 324 ||||||||||| || |||||||| | |||||||| || ||||||||||||||||| | | Sbjct: 1500 atcctcccgtctttagtcatatacacatgccatttgtccgtcatgttatcgctctgagct 1441 Query: 325 ctgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaagaccagtcctt 383 |||| | ||| ||||| ||||||||||| || || | |||||||| ||||||||||| Sbjct: 1440 ttgtttaggccggtgaaagagaacatgccaatttgcttcagaatgaaggaccagtcctt 1382
>ref|NM_179152.1| Arabidopsis thaliana ASP5 (ASPARTATE AMINOTRANSFERASE 5) AT4G31990 (ASP5) transcript variant AT4G31990.2 mRNA, complete cds Length = 1830 Score = 101 bits (51), Expect = 3e-18 Identities = 147/179 (82%) Strand = Plus / Minus Query: 205 gagtcgatgatggcatcagcaaggtactcgcatttcgccaggttcagccctgccaacgaa 264 ||||||||||| ||||||||||| ||||||||||| ||||| | || ||||| || Sbjct: 1554 gagtcgatgatcgcatcagcaagatactcgcatttggccagagataatccggccaatgat 1495 Query: 265 atcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcgctctgggtt 324 ||||||||||| || |||||||| | |||||||| || ||||||||||||||||| | | Sbjct: 1494 atcctcccgtctttagtcatatacacatgccatttgtccgtcatgttatcgctctgagct 1435 Query: 325 ctgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaagaccagtcctt 383 |||| | ||| ||||| ||||||||||| || || | |||||||| ||||||||||| Sbjct: 1434 ttgtttaggccggtgaaagagaacatgccaatttgcttcagaatgaaggaccagtcctt 1376
>ref|NM_001036690.1| Arabidopsis thaliana ASP5 (ASPARTATE AMINOTRANSFERASE 5) AT4G31990 (ASP5) transcript variant AT4G31990.3 mRNA, complete cds Length = 1712 Score = 101 bits (51), Expect = 3e-18 Identities = 147/179 (82%) Strand = Plus / Minus Query: 205 gagtcgatgatggcatcagcaaggtactcgcatttcgccaggttcagccctgccaacgaa 264 ||||||||||| ||||||||||| ||||||||||| ||||| | || ||||| || Sbjct: 1551 gagtcgatgatcgcatcagcaagatactcgcatttggccagagataatccggccaatgat 1492 Query: 265 atcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcgctctgggtt 324 ||||||||||| || |||||||| | |||||||| || ||||||||||||||||| | | Sbjct: 1491 atcctcccgtctttagtcatatacacatgccatttgtccgtcatgttatcgctctgagct 1432 Query: 325 ctgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaagaccagtcctt 383 |||| | ||| ||||| ||||||||||| || || | |||||||| ||||||||||| Sbjct: 1431 ttgtttaggccggtgaaagagaacatgccaatttgcttcagaatgaaggaccagtcctt 1373
>emb|X81026.1|ATAAT1 A.thaliana aat1 mRNA Length = 1732 Score = 101 bits (51), Expect = 3e-18 Identities = 147/179 (82%) Strand = Plus / Minus Query: 205 gagtcgatgatggcatcagcaaggtactcgcatttcgccaggttcagccctgccaacgaa 264 ||||||||||| ||||||||||| ||||||||||| ||||| | || ||||| || Sbjct: 1470 gagtcgatgatcgcatcagcaagatactcgcatttggccagagataatccggccaatgat 1411 Query: 265 atcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcgctctgggtt 324 ||||||||||| || |||||||| | |||||||| || ||||||||||||||||| | | Sbjct: 1410 atcctcccgtctttagtcatatacacatgccatttgtccgtcatgttatcgctctgagct 1351 Query: 325 ctgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaagaccagtcctt 383 |||| | ||| ||||| ||||||||||| || || | |||||||| ||||||||||| Sbjct: 1350 ttgtttaggccggtgaaagagaacatgccaatttgcttcagaatgaaggaccagtcctt 1292
>dbj|AK221984.1| Arabidopsis thaliana mRNA for aspartate aminotransferase, partial cds, clone: RAFL22-59-H20 Length = 822 Score = 101 bits (51), Expect = 3e-18 Identities = 147/179 (82%) Strand = Plus / Minus Query: 205 gagtcgatgatggcatcagcaaggtactcgcatttcgccaggttcagccctgccaacgaa 264 ||||||||||| ||||||||||| ||||||||||| ||||| | || ||||| || Sbjct: 545 gagtcgatgatcgcatcagcaagatactcgcatttggccagagataatccggccaatgat 486 Query: 265 atcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcgctctgggtt 324 ||||||||||| || |||||||| | |||||||| || ||||||||||||||||| | | Sbjct: 485 atcctcccgtctttagtcatatacacatgccatttgtccgtcatgttatcgctctgagct 426 Query: 325 ctgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaagaccagtcctt 383 |||| | ||| ||||| ||||||||||| || || | |||||||| ||||||||||| Sbjct: 425 ttgtttaggccggtgaaagagaacatgccaatttgcttcagaatgaaggaccagtcctt 367
>emb|BX828049.1|CNS0A3UQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH48ZE02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 508 Score = 101 bits (51), Expect = 3e-18 Identities = 147/179 (82%) Strand = Plus / Minus Query: 205 gagtcgatgatggcatcagcaaggtactcgcatttcgccaggttcagccctgccaacgaa 264 ||||||||||| ||||||||||| ||||||||||| ||||| | || ||||| || Sbjct: 342 gagtcgatgatcgcatcagcaagatactcgcatttggccagagataatccggccaatgat 283 Query: 265 atcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcgctctgggtt 324 ||||||||||| || |||||||| | |||||||| || ||||||||||||||||| | | Sbjct: 282 atcctcccgtctttagtcatatacacatgccatttgtccgtcatgttatcgctctgagct 223 Query: 325 ctgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaagaccagtcctt 383 |||| | ||| ||||| ||||||||||| || || | |||||||| ||||||||||| Sbjct: 222 ttgtttaggccggtgaaagagaacatgccaatttgcttcagaatgaaggaccagtcctt 164
>emb|BX827671.1|CNS0A3OI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS94ZE04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1566 Score = 101 bits (51), Expect = 3e-18 Identities = 147/179 (82%) Strand = Plus / Minus Query: 205 gagtcgatgatggcatcagcaaggtactcgcatttcgccaggttcagccctgccaacgaa 264 ||||||||||| ||||||||||| ||||||||||| ||||| | || ||||| || Sbjct: 1428 gagtcgatgatcgcatcagcaagatactcgcatttggccagagataatccggccaatgat 1369 Query: 265 atcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcgctctgggtt 324 ||||||||||| || |||||||| | |||||||| || ||||||||||||||||| | | Sbjct: 1368 atcctcccgtctttagtcatatacacatgccatttgtccgtcatgttatcgctctgagct 1309 Query: 325 ctgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaagaccagtcctt 383 |||| | ||| ||||| ||||||||||| || || | |||||||| ||||||||||| Sbjct: 1308 ttgtttaggccggtgaaagagaacatgccaatttgcttcagaatgaaggaccagtcctt 1250
>emb|BX828177.1|CNS0A2EC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZA09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1599 Score = 101 bits (51), Expect = 3e-18 Identities = 147/179 (82%) Strand = Plus / Minus Query: 205 gagtcgatgatggcatcagcaaggtactcgcatttcgccaggttcagccctgccaacgaa 264 ||||||||||| ||||||||||| ||||||||||| ||||| | || ||||| || Sbjct: 1404 gagtcgatgatcgcatcagcaagatactcgcatttggccagagataatccggccaatgat 1345 Query: 265 atcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcgctctgggtt 324 ||||||||||| || |||||||| | |||||||| || ||||||||||||||||| | | Sbjct: 1344 atcctcccgtctttagtcatatacacatgccatttgtccgtcatgttatcgctctgagct 1285 Query: 325 ctgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaagaccagtcctt 383 |||| | ||| ||||| ||||||||||| || || | |||||||| ||||||||||| Sbjct: 1284 ttgtttaggccggtgaaagagaacatgccaatttgcttcagaatgaaggaccagtcctt 1226
>gb|AY087266.1| Arabidopsis thaliana clone 33414 mRNA, complete sequence Length = 1692 Score = 101 bits (51), Expect = 3e-18 Identities = 147/179 (82%) Strand = Plus / Minus Query: 205 gagtcgatgatggcatcagcaaggtactcgcatttcgccaggttcagccctgccaacgaa 264 ||||||||||| ||||||||||| ||||||||||| ||||| | || ||||| || Sbjct: 1447 gagtcgatgatcgcatcagcaagatactcgcatttggccagagataatccggccaatgat 1388 Query: 265 atcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcgctctgggtt 324 ||||||||||| || |||||||| | |||||||| || ||||||||||||||||| | | Sbjct: 1387 atcctcccgtctttagtcatatacacatgccatttgtccgtcatgttatcgctctgagct 1328 Query: 325 ctgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaagaccagtcctt 383 |||| | ||| ||||| ||||||||||| || || | |||||||| ||||||||||| Sbjct: 1327 ttgtttaggccggtgaaagagaacatgccaatttgcttcagaatgaaggaccagtcctt 1269
>gb|AY084314.1| Arabidopsis thaliana clone 103854 mRNA, complete sequence Length = 1836 Score = 97.6 bits (49), Expect = 4e-17 Identities = 146/179 (81%) Strand = Plus / Minus Query: 205 gagtcgatgatggcatcagcaaggtactcgcatttcgccaggttcagccctgccaacgaa 264 ||||||||||| ||||||||||| ||||||||||| ||||| | || ||||| || Sbjct: 1560 gagtcgatgatcgcatcagcaagatactcgcatttggccagagataatccggccaatgat 1501 Query: 265 atcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcgctctgggtt 324 ||||||||||| || ||| |||| | |||||||| || ||||||||||||||||| | | Sbjct: 1500 atcctcccgtctttagtcrtatacacatgccatttgtccgtcatgttatcgctctgagat 1441 Query: 325 ctgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaagaccagtcctt 383 |||| | ||| ||||| ||||||||||| || || | |||||||| ||||||||||| Sbjct: 1440 ttgtttaggccggtgaaagagaacatgccaatttgcttcagaatgaaggaccagtcctt 1382
>gb|DQ252487.1| Solanum tuberosum clone 054C05 aspartate aminotransferase-like mRNA, complete cds Length = 1632 Score = 85.7 bits (43), Expect = 2e-13 Identities = 151/187 (80%) Strand = Plus / Minus Query: 292 tgccatttatcggtcatgttatcgctctgggttctgttcaagcccgtgaaggagaacatg 351 ||||| ||||||| |||||| |||||||| | | |||| | || |||||||||||||| Sbjct: 1345 tgccacttatcggccatgttctcgctctgagctttgttgagacctgtgaaggagaacatt 1286 Query: 352 cctatctggctaagaatgaaagaccagtccttgccagactggtcctttgcagtcaagcta 411 |||||||| | |||||||| ||||||||||| ||| || ||||| || | | |||| Sbjct: 1285 cctatctgcttcagaatgaacgaccagtcctttccactcttatccttggcggagaggcta 1226 Query: 412 tcgtaaagcttctgccgaacattcttgatccgccctgccatttgttccatctcttctttc 471 || || |||||||| | |||| |||| |||| ||||||||| |||||||||||||||| Sbjct: 1225 tcatatagcttctgtctaacactctttatcctccctgccatcatttccatctcttctttc 1166 Query: 472 cactcac 478 || |||| Sbjct: 1165 cattcac 1159
>emb|X91865.1|ATASP5GEN A.thaliana asp5 gene Length = 4836 Score = 79.8 bits (40), Expect = 1e-11 Identities = 97/116 (83%) Strand = Plus / Minus Query: 205 gagtcgatgatggcatcagcaaggtactcgcatttcgccaggttcagccctgccaacgaa 264 ||||||||||| ||||||||||| ||||||||||| ||||| | || ||||| || Sbjct: 4664 gagtcgatgatcgcatcagcaagatactcgcatttggccagagataatccggccaatgat 4605 Query: 265 atcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcgctctg 320 ||||||||||| || |||||||| | |||||||| || ||||||||||||||||| Sbjct: 4604 atcctcccgtctttagtcatatacacatgccatttgtccgtcatgttatcgctctg 4549
>emb|AL049607.1|ATF11C18 Arabidopsis thaliana DNA chromosome 4, BAC clone F11C18 (ESSA project) Length = 111517 Score = 79.8 bits (40), Expect = 1e-11 Identities = 97/116 (83%) Strand = Plus / Plus Query: 205 gagtcgatgatggcatcagcaaggtactcgcatttcgccaggttcagccctgccaacgaa 264 ||||||||||| ||||||||||| ||||||||||| ||||| | || ||||| || Sbjct: 97699 gagtcgatgatcgcatcagcaagatactcgcatttggccagagataatccggccaatgat 97758 Query: 265 atcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcgctctg 320 ||||||||||| || |||||||| | |||||||| || ||||||||||||||||| Sbjct: 97759 atcctcccgtctttagtcatatacacatgccatttgtccgtcatgttatcgctctg 97814
>emb|AL021636.3|ATF10N7 Arabidopsis thaliana DNA chromosome 4, BAC clone F10N7 (ESSA project) Length = 96585 Score = 79.8 bits (40), Expect = 1e-11 Identities = 97/116 (83%) Strand = Plus / Minus Query: 205 gagtcgatgatggcatcagcaaggtactcgcatttcgccaggttcagccctgccaacgaa 264 ||||||||||| ||||||||||| ||||||||||| ||||| | || ||||| || Sbjct: 68156 gagtcgatgatcgcatcagcaagatactcgcatttggccagagataatccggccaatgat 68097 Query: 265 atcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcgctctg 320 ||||||||||| || |||||||| | |||||||| || ||||||||||||||||| Sbjct: 68096 atcctcccgtctttagtcatatacacatgccatttgtccgtcatgttatcgctctg 68041
>emb|AL161580.2|ATCHRIV76 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 76 Length = 165698 Score = 79.8 bits (40), Expect = 1e-11 Identities = 97/116 (83%) Strand = Plus / Plus Query: 205 gagtcgatgatggcatcagcaaggtactcgcatttcgccaggttcagccctgccaacgaa 264 ||||||||||| ||||||||||| ||||||||||| ||||| | || ||||| || Sbjct: 45797 gagtcgatgatcgcatcagcaagatactcgcatttggccagagataatccggccaatgat 45856 Query: 265 atcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcgctctg 320 ||||||||||| || |||||||| | |||||||| || ||||||||||||||||| Sbjct: 45857 atcctcccgtctttagtcatatacacatgccatttgtccgtcatgttatcgctctg 45912
>gb|S60967.1|S60967 Glycine max aspartate aminotransferase isozyme 5 mRNA, complete cds; chloroplast gene for chloroplast product Length = 1755 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Minus Query: 253 cctgccaacgaaatcctcccgtccttggtcatatatatgtgccatttatcggtcatgtta 312 |||||| | |||||||| || ||||| ||||| |||| |||||| || | |||||||| Sbjct: 1397 cctgccgaggaaatccttccatcctttgtcatgtatacgtgccacttgtttgtcatgttg 1338 Query: 313 tcgctctgggttctgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaa 372 || |||||| | |||||||||| ||||| ||||||||||||||||| |||| ||||| Sbjct: 1337 tcactctggttcttgttcaagccagtgaatgagaacatgcctatctgcttaagtatgaat 1278 Query: 373 gaccagtcctt 383 ||||| ||||| Sbjct: 1277 gaccaatcctt 1267
>gb|L09702.1|SOYASPAM Glycine max (clone pSAT17) aspartate aminotransferase mRNA, complete cds Length = 1755 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Minus Query: 253 cctgccaacgaaatcctcccgtccttggtcatatatatgtgccatttatcggtcatgtta 312 ||||||| |||||||| || ||||| ||||| |||| |||||| || | |||||||| Sbjct: 1397 cctgccagggaaatccttccatcctttgtcatgtatacgtgccacttgtttgtcatgttg 1338 Query: 313 tcgctctgggttctgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaa 372 || |||||| | |||||||||| ||||| ||||||||||||||||| |||| ||||| Sbjct: 1337 tcactctggttcttgttcaagccagtgaatgagaacatgcctatctgcttaagtatgaat 1278 Query: 373 gaccagtcctt 383 ||||| ||||| Sbjct: 1277 gaccaatcctt 1267
>gb|AF029898.1|AF029898 Lotus corniculatus aspartate aminotransferase mRNA, complete cds Length = 1685 Score = 71.9 bits (36), Expect = 2e-09 Identities = 120/148 (81%) Strand = Plus / Minus Query: 326 tgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaagaccagtccttgc 385 |||||||||| ||||| ||||||||||||||||| |||| ||||| ||||| ||||| | Sbjct: 1352 tgttcaagcctgtgaatgagaacatgcctatctgcttaagtatgaatgaccaatcctttc 1293 Query: 386 cagactggtcctttgcagtcaagctatcgtaaagcttctgccgaacattcttgatccgcc 445 || || ||| |||| || | ||||| || |||||||| | ||||||||| |||| | Sbjct: 1292 cactcttgtcttttgaagaaatactatcatatagcttctgtctaacattctttatccttc 1233 Query: 446 ctgccatttgttccatctcttctttcca 473 ||||||| |||||||||| ||||||| Sbjct: 1232 ctgccatcatttccatctctgctttcca 1205
>ref|XM_751649.1| Ustilago maydis 521 hypothetical protein (UM00595.1) partial mRNA Length = 1302 Score = 69.9 bits (35), Expect = 1e-08 Identities = 41/43 (95%) Strand = Plus / Minus Query: 512 cgatcttggcaccgtgaataggtgggtttgagtacatgggccg 554 |||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 985 cgatcttggcaccgtgcataggtgggttcgagtacatgggccg 943
>gb|U89494.1|CLU89494 Canavalia lineata aspartate aminotransferase 2 precursor (AAT2) mRNA, complete cds Length = 1737 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Minus Query: 253 cctgccaacgaaatcctcccgtccttggtcatatatatgtgccatttatcggtcatgtta 312 ||||||| |||||||| || ||||| ||||| |||| ||||| |||| |||||||| Sbjct: 1374 cctgccagggaaatccttccatcctttgtcatgtatacatgccacttatttgtcatgttg 1315 Query: 313 tcgctctgggttctgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaa 372 || ||||| |||||||||| ||||| ||||||||||||||||| |||| ||||| Sbjct: 1314 tcactctgttccttgttcaagcctgtgaatgagaacatgcctatctgcttaagtatgaat 1255 Query: 373 gaccagtcctt 383 ||||| ||||| Sbjct: 1254 gaccaatcctt 1244
>emb|AJ001360.1|CLJ001360 Canavalia lineata gene for aspartate aminotransferase 2 Length = 4592 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 326 tgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaagaccagtcctt 383 |||||||||| ||||| ||||||||||||||||| |||| ||||| ||||| ||||| Sbjct: 3918 tgttcaagcctgtgaatgagaacatgcctatctgcttaagtatgaatgaccaatcctt 3861
>dbj|AB126259.1| Nicotiana tabacum mRNA for aspartate aminotransferase, partial cds Length = 1060 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 256 gccaacgaaatcctcccgtccttggtcatatatatgtgccatttatcggtcatgttatcg 315 |||||||| ||||||||||| || ||||| || | ||||| || | ||||||||| ||| Sbjct: 614 gccaacgatatcctcccgtcttttgtcatgtacacatgccacttgttggtcatgttctcg 555 Query: 316 ctctgggttctgttcaagcccgtgaaggagaacatgcctatctg 359 ||||| | | |||| | ||| |||||||||||||| || ||||| Sbjct: 554 ctctgagctttgttgaggcctgtgaaggagaacattccaatctg 511
>gb|AF315376.1| Phaseolus vulgaris aspartate aminotransferase mRNA, complete cds; plastid gene for plastid product Length = 1797 Score = 54.0 bits (27), Expect = 6e-04 Identities = 87/107 (81%) Strand = Plus / Minus Query: 253 cctgccaacgaaatcctcccgtccttggtcatatatatgtgccatttatcggtcatgtta 312 ||||||| |||||||| |||||||| ||||| |||| ||||| |||| |||||||| Sbjct: 1494 cctgccagggaaatccttccgtcctttgtcatgtatacatgccacttatttgtcatgttg 1435 Query: 313 tcgctctgggttctgttcaagcccgtgaaggagaacatgcctatctg 359 || |||| |||||||||| ||||| ||||||||||||||||| Sbjct: 1434 tcagtctgttccttgttcaagccagtgaatgagaacatgcctatctg 1388
>gb|L25335.1|ALFAAT2A Medicago sativa aspartate aminotransferase (AAT2) gene, complete cds Length = 5788 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 326 tgttcaagcccgtgaaggagaacatgcctatctg 359 |||||||||| ||||| ||||||||||||||||| Sbjct: 4956 tgttcaagcctgtgaatgagaacatgcctatctg 4923
>emb|X59761.1|LAASPAT Lupinus angustifolius mRNA for aspartate aminotransferase Length = 1645 Score = 46.1 bits (23), Expect = 0.14 Identities = 104/131 (79%) Strand = Plus / Minus Query: 253 cctgccaacgaaatcctcccgtccttggtcatatatatgtgccatttatcggtcatgtta 312 ||||||| ||||| || || ||||| ||||| |||| ||||| |||| |||||||| Sbjct: 1300 cctgccagtgaaattcttccatcctttgtcatgtatacatgccacttatttgtcatgttg 1241 Query: 313 tcgctctgggttctgttcaagcccgtgaaggagaacatgcctatctggctaagaatgaaa 372 || |||||| | |||| | ||| ||| | ||||||||||||||||| |||| ||||| Sbjct: 1240 tcactctggttcttgttgaggcctgtgtatgagaacatgcctatctgcttaagtatgaat 1181 Query: 373 gaccagtcctt 383 ||||| ||||| Sbjct: 1180 gaccaatcctt 1170
>gb|AC093104.2| Drosophila melanogaster clone BACR38O04, complete sequence Length = 167107 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 tccttggtcatatatatgtgc 294 ||||||||||||||||||||| Sbjct: 52878 tccttggtcatatatatgtgc 52898
>ref|XM_370015.1| Magnaporthe grisea 70-15 hypothetical protein (MG06530.4) partial mRNA Length = 1287 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 507 ggcgacgatcttggcaccgtgaataggtgggtttgagtacatggg 551 |||| ||||| |||||||||| || || ||||| ||||||||||| Sbjct: 972 ggcggcgatcctggcaccgtggattggggggttcgagtacatggg 928
>gb|AC127327.4| Mus musculus BAC clone RP23-254M18 from 5, complete sequence Length = 198433 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 gttttgccagattatttatta 56 ||||||||||||||||||||| Sbjct: 194243 gttttgccagattatttatta 194223
>emb|AL954387.17| Zebrafish DNA sequence from clone CH211-288B20 in linkage group 18, complete sequence Length = 125744 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 126 atcccagcaaactatagaaggaact 150 ||||| ||||||||||||||||||| Sbjct: 15567 atccctgcaaactatagaaggaact 15591
>gb|AC131727.4| Mus musculus BAC clone RP23-120E19 from 14, complete sequence Length = 208338 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 381 cttgccagactggtcctttgc 401 ||||||||||||||||||||| Sbjct: 42062 cttgccagactggtcctttgc 42082
>gb|AC151833.3| Mus musculus BAC clone RP23-374P15 from 14, complete sequence Length = 197918 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 381 cttgccagactggtcctttgc 401 ||||||||||||||||||||| Sbjct: 120456 cttgccagactggtcctttgc 120476
>gb|AE003839.4| Drosophila melanogaster chromosome 2R, section 11 of 73 of the complete sequence Length = 254177 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 tccttggtcatatatatgtgc 294 ||||||||||||||||||||| Sbjct: 241570 tccttggtcatatatatgtgc 241590
>gb|AC140301.3| Mus musculus BAC clone RP23-435M8 from 5, complete sequence Length = 197633 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 gttttgccagattatttatta 56 ||||||||||||||||||||| Sbjct: 178276 gttttgccagattatttatta 178296
>gb|L29258.1|LUPP2AA Lupinus angustifolius aspartate aminotransferase (P2) gene exons 1-11 Length = 6882 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 343 gagaacatgcctatctggctaagaatgaaagaccagtcctt 383 ||||||||||||||||| |||| ||||| ||||| ||||| Sbjct: 4842 gagaacatgcctatctgcttaagtatgaatgaccaatcctt 4802
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 tccatctcttctttccactc 476 |||||||||||||||||||| Sbjct: 1700253 tccatctcttctttccactc 1700234
>ref|XM_360726.1| Magnaporthe grisea 70-15 hypothetical protein (MG03269.4) partial mRNA Length = 4278 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 acacatcatcagcatcctga 96 |||||||||||||||||||| Sbjct: 2182 acacatcatcagcatcctga 2163
>ref|XM_751666.1| Ustilago maydis 521 hypothetical protein (UM00612.1) partial mRNA Length = 5850 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 caacgttggcgacgatcttggcac 523 ||||||||||||| |||||||||| Sbjct: 4908 caacgttggcgacaatcttggcac 4931
>gb|AC123855.4| Mus musculus BAC clone RP23-328J17 from chromosome 12, complete sequence Length = 205684 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccttgccagactggtccttt 399 |||||||||||||||||||| Sbjct: 34320 ccttgccagactggtccttt 34339
>gb|AY139182.1| Homo sapiens 18 kDa antrum mucosa protein (AMP18) gene, complete cds Length = 7995 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 atctcttctttccactcacc 479 |||||||||||||||||||| Sbjct: 6291 atctcttctttccactcacc 6272
>emb|AL833013.1|HSM804324 Homo sapiens mRNA; cDNA DKFZp666N164 (from clone DKFZp666N164) Length = 2438 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 atctcttctttccactcacc 479 |||||||||||||||||||| Sbjct: 937 atctcttctttccactcacc 918
>gb|AC114802.5| Homo sapiens BAC clone RP11-790N8 from 2, complete sequence Length = 154814 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 atctcttctttccactcacc 479 |||||||||||||||||||| Sbjct: 37888 atctcttctttccactcacc 37869
>gb|AC157571.6| Mus musculus BAC clone RP23-111F7 from chromosome 12, complete sequence Length = 208117 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccttgccagactggtccttt 399 |||||||||||||||||||| Sbjct: 201598 ccttgccagactggtccttt 201617
>emb|AL929120.7| Mouse DNA sequence from clone RP23-457H10 on chromosome 2, complete sequence Length = 178517 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 gctgtgcaaatgacatttat 620 |||||||||||||||||||| Sbjct: 109127 gctgtgcaaatgacatttat 109108
>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome Length = 2905187 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 tcgatgatggcatcagcaag 227 |||||||||||||||||||| Sbjct: 612178 tcgatgatggcatcagcaag 612197 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,177,587 Number of Sequences: 3902068 Number of extensions: 5177587 Number of successful extensions: 85881 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85703 Number of HSP's gapped (non-prelim): 177 length of query: 646 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 623 effective length of database: 17,143,297,704 effective search space: 10680274469592 effective search space used: 10680274469592 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)