| Clone Name | rbags8a08 |
|---|---|
| Clone Library Name | barley_pub |
>AKR2_ARATH (Q9SAR5) Ankyrin repeat domain-containing protein 2 (AtAKR2)| Length = 342 Score = 37.7 bits (86), Expect = 0.007 Identities = 19/25 (76%), Positives = 20/25 (80%) Frame = -3 Query: 324 KTPIXVAKLNSQF*VVKLXEQDVFL 250 KTPI VAKLNSQ VVKL E+D FL Sbjct: 318 KTPIDVAKLNSQLEVVKLLEKDAFL 342
>SCRL9_ARATH (P82628) Hypothetical protein SCRL9 precursor| Length = 90 Score = 29.3 bits (64), Expect = 2.6 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = -1 Query: 284 RWSSXWSRTCSYEANPQTRC 225 RW++ ++ TCS NPQT C Sbjct: 34 RWTNAFNGTCSDRGNPQTMC 53
>SYL1_SULTO (Q974N4) Leucyl-tRNA synthetase 1 (EC 6.1.1.4) (Leucine--tRNA| ligase 1) (LeuRS 1) Length = 945 Score = 28.5 bits (62), Expect = 4.4 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = -1 Query: 290 SFRWSSXWSRTCSYEANPQT 231 +F+W W + YEANP+T Sbjct: 11 AFKWQKEWENSKVYEANPET 30
>LMAN2_HUMAN (Q12907) Vesicular integral-membrane protein VIP36 precursor (GP36b| glycoprotein) (Lectin, mannose-binding 2) Length = 356 Score = 28.1 bits (61), Expect = 5.7 Identities = 19/57 (33%), Positives = 25/57 (43%) Frame = +2 Query: 20 GRWTKXQGCTAGSNQRXXDGLLLSSTARPHR*QAXSYQTK*TEGKRPTPCLDMTPLR 190 GRWT+ GCTA R D L +R + K E K C+D+T +R Sbjct: 194 GRWTELAGCTADFRNRDHDTFLAVRYSRGRLTVMTDLEDK-NEWKN---CIDITGVR 246
>LMAN2_CANFA (P49256) Vesicular integral-membrane protein VIP36 precursor| (Lectin, mannose-binding 2) Length = 356 Score = 28.1 bits (61), Expect = 5.7 Identities = 19/57 (33%), Positives = 25/57 (43%) Frame = +2 Query: 20 GRWTKXQGCTAGSNQRXXDGLLLSSTARPHR*QAXSYQTK*TEGKRPTPCLDMTPLR 190 GRWT+ GCTA R D L +R + K E K C+D+T +R Sbjct: 194 GRWTELAGCTADFRNRDHDTFLAVRYSRGRLTVMTDLEDK-NEWKN---CIDITGVR 246
>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC| 2.7.11.1) Length = 942 Score = 28.1 bits (61), Expect = 5.7 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = -3 Query: 78 PSXXRWFDPAVQPCXFVHLPCTG 10 PS W DP PC + H+ CTG Sbjct: 42 PSSFGWSDP--DPCKWTHIVCTG 62 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,240,128 Number of Sequences: 219361 Number of extensions: 675412 Number of successful extensions: 1377 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1358 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1377 length of database: 80,573,946 effective HSP length: 85 effective length of database: 61,928,261 effective search space used: 1486278264 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)