ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags7l08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009475.1| Triticum aestivum clone wr1.pk0032.h7:fis, full i... 678 0.0
2gb|AY104927.1| Zea mays PCO113544 mRNA sequence 246 7e-62
3gb|BT016683.1| Zea mays clone Contig516 mRNA sequence 238 2e-59
4dbj|AK119165.1| Oryza sativa (japonica cultivar-group) cDNA clon... 236 7e-59
5dbj|AK069541.1| Oryza sativa (japonica cultivar-group) cDNA clon... 236 7e-59
6dbj|AK104881.1| Oryza sativa (japonica cultivar-group) cDNA clon... 228 2e-56
7dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
8gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 109 1e-20
9emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa... 109 1e-20
10gb|DQ192536.1| Zea mays clone mmp123 genomic sequence 62 2e-06
11dbj|AB097405.1| Raphanus sativus RsProRS2 mRNA for prolyl-tRNA s... 60 8e-06
12gb|BT013426.1| Lycopersicon esculentum clone 132066F, mRNA sequence 50 0.008
13dbj|AP004579.1| Lotus japonicus genomic DNA, chromosome 2, clone... 46 0.13
14dbj|AP004576.1| Lotus japonicus genomic DNA, chromosome 2, clone... 46 0.13
15gb|AC098583.2| Homo sapiens BAC clone RP11-10G12 from 4, complet... 44 0.50
16gb|AC016888.23| Homo sapiens chromosome 17, clone RP11-452I5, co... 44 0.50
17gb|AC068874.21| Homo sapiens chromosome 17, clone RP11-399J11, c... 44 0.50
18emb|AL583891.15| Mouse DNA sequence from clone RP23-292L2 on chr... 44 0.50
19gb|AC005537.2| Homo sapiens BAC clone GS1-308H5 from 7, complete... 42 2.0
20dbj|AP004967.1| Lotus japonicus genomic DNA, chromosome 1, clone... 42 2.0
21gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
22gb|AC108504.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
23gb|AC137751.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
24ref|XM_859900.1| PREDICTED: Canis familiaris similar to splicing... 40 7.9
25ref|XM_533865.2| PREDICTED: Canis familiaris similar to splicing... 40 7.9
26ref|XM_859864.1| PREDICTED: Canis familiaris similar to splicing... 40 7.9
27ref|XM_749958.1| Aspergillus fumigatus Af293 nuclear envelope po... 40 7.9
28gb|AC124398.4| Mus musculus BAC clone RP24-349M24 from chromosom... 40 7.9
29gb|AC125092.4| Mus musculus BAC clone RP24-174F18 from chromosom... 40 7.9
30gb|AC117258.2| Mus musculus BAC clone RP24-491P21 from X, comple... 40 7.9
31emb|AJ301617.1|DRE301617 Danio rerio partial mRNA for Frizzled 7... 40 7.9
32emb|AL845333.3| Mouse DNA sequence from clone RP23-245E19 on chr... 40 7.9
33emb|CR788242.3| Zebrafish DNA sequence from clone DKEY-239H16 in... 40 7.9
34gb|AC154796.2| Mus musculus BAC clone RP24-490B17 from chromosom... 40 7.9
35gb|AC022495.17| Homo sapiens 3 BAC RP11-94I16 (Roswell Park Canc... 40 7.9
36gb|AC008902.5| Homo sapiens chromosome 5 clone CTD-2249G23, comp... 40 7.9
37dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
38dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
39gb|AY954953.1| Bacteriophage 85, complete genome 40 7.9
40gb|AC141636.4| Mus musculus BAC clone RP23-471D17 from chromosom... 40 7.9
41gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
42gb|AF252829.4| Homo sapiens chromosome 8 clone RP11-495D4 map 8q... 40 7.9 
>gb|BT009475.1| Triticum aestivum clone wr1.pk0032.h7:fis, full insert mRNA sequence
          Length = 1291

 Score =  678 bits (342), Expect = 0.0
 Identities = 430/457 (94%), Gaps = 3/457 (0%)
 Strand = Plus / Minus

                                                                        
Query: 120  gaaataaacagatttgccagaacaaacggacaatgaaaatggcaatgtata-ggtggcag 178
            ||||||||||| ||||||||| ||||||  | | ||||||| ||||||||| |||| |||
Sbjct: 1105 gaaataaacagctttgccagagcaaacgatccacgaaaatgccaatgtataaggtgacag 1046

                                                                        
Query: 179  aacacagggatcaatagctgcggccccagaatgaccacttttgagcaggctttccagaag 238
            |||||||  ||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 1045 aacacag--atcaatagctgcgaccccagaatgaccacttttgagcaggctttccggaag 988

                                                                        
Query: 239  caaagcacacggttccggaaggaagatctggctggtcaaatggagtacacaaggttttcg 298
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 987  caaagcacacggttccggaaggaagatctggctggtcaaatggagtacacaatgttttcg 928

                                                                        
Query: 299  cagctccaagttcacctttggtccgagctttcacgtccttctcgacctcctcctcatcac 358
            |||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 927  cagccccaagttcacctttggtccgagctttcacgtccttctccacctcctcttcatcac 868

                                                                        
Query: 359  accatggagccaagatcaactttttgtcattgagagctgctatgaattcatcccaagtgc 418
            |||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 867  accatggagccaagatcaactttttgtcgttgagagccgctatgaattcatcccaggtgc 808

                                                                        
Query: 419  taatgattacaatgcaggcatctctctttgctttcgctgtttccaacaagtttgcttgaa 478
            | ||||||  ||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 807  tgatgattttaatgcaggcgtctctctttgctttcgctgtttccaacaagtttacttgaa 748

                                                                        
Query: 479  tcccatccagcaacactctaacctgctcaaccaagtcggttgaaggaatatcaacctttg 538
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747  tcccatccagcaacactctaacctgctcaaccaagtcggttgaaggaatatcaacctttg 688

                                                 
Query: 539  caccattgtctcgccggacaatgcgcacctgcttgtt 575
             ||||||||||||||||||||| ||||||||||||||
Sbjct: 687  taccattgtctcgccggacaatacgcacctgcttgtt 651



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 96/111 (86%), Gaps = 6/111 (5%)
 Strand = Plus / Minus

                                                                        
Query: 1    acgaaatngcaaatggacaaccaataccacagttgcagtgtatcatacgaaagcattnct 60
            ||||||| ||||||||||||| ||| || ||||| ||| |||||| | ||||||||| ||
Sbjct: 1186 acgaaatagcaaatggacaactaat-ccgcagttacag-gtatcacaggaaagcattact 1129

                                                               
Query: 61   caaaaatcaggtag----tataagaaataaacagatttgccagaacaaacg 107
            ||||||||||||||    |||||||||||||||| ||||||||| ||||||
Sbjct: 1128 caaaaatcaggtagtatatataagaaataaacagctttgccagagcaaacg 1078
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>gb|AY104927.1| Zea mays PCO113544 mRNA sequence
          Length = 1954

 Score =  246 bits (124), Expect = 7e-62
 Identities = 322/388 (82%)
 Strand = Plus / Minus

                                                                        
Query: 188  atcaatagctgcggccccagaatgaccacttttgagcaggctttccagaagcaaagcaca 247
            |||| ||||||||||||||||| |||||||| |  || ||||||||||| ||||||||||
Sbjct: 1754 atcagtagctgcggccccagaacgaccacttcttcgctggctttccagatgcaaagcaca 1695

                                                                        
Query: 248  cggttccggaaggaagatctggctggtcaaatggagtacacaaggttttcgcagctccaa 307
             ||| ||    ||||| |||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 1694 gggtaccttctggaagttctggctgctcaaatggagtacacaatgttttcgcagctccaa 1635

                                                                        
Query: 308  gttcacctttggtccgagctttcacgtccttctcgacctcctcctcatcacaccatggag 367
            |||| ||||| ||||||| ||| || || ||||| |  ||||||||||||||||||||||
Sbjct: 1634 gttccccttttgtccgagtttttacatctttctcaatttcctcctcatcacaccatggag 1575

                                                                        
Query: 368  ccaagatcaactttttgtcattgagagctgctatgaattcatcccaagtgctaatgatta 427
            |||||||||||||||||| ||| ||||| | | ||||||||||||||||| | | ||   
Sbjct: 1574 ccaagatcaactttttgttattcagagcagttgtgaattcatcccaagtgttcacgacat 1515

                                                                        
Query: 428  caatgcaggcatctctctttgctttcgctgtttccaacaagtttgcttgaatcccatcca 487
             ||  ||||||||||||||| |||  |||||||  ||||  |||  ||||||| ||||||
Sbjct: 1514 gaacacaggcatctctcttttcttgggctgttttgaacagatttttttgaatctcatcca 1455

                                                                        
Query: 488  gcaacactctaacctgctcaaccaagtcggttgaaggaatatcaacctttgcaccattgt 547
            | |||||| ||||||  |||||||| | |||   ||| || |||||||||||||| ||||
Sbjct: 1454 gtaacactttaacctcttcaaccaaattggtcacagggatgtcaacctttgcaccgttgt 1395

                                        
Query: 548  ctcgccggacaatgcgcacctgcttgtt 575
            | || |||||||  |||||||| |||||
Sbjct: 1394 cccggcggacaacacgcacctgtttgtt 1367
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>gb|BT016683.1| Zea mays clone Contig516 mRNA sequence
          Length = 1416

 Score =  238 bits (120), Expect = 2e-59
 Identities = 309/372 (83%)
 Strand = Plus / Minus

                                                                        
Query: 188  atcaatagctgcggccccagaatgaccacttttgagcaggctttccagaagcaaagcaca 247
            |||| ||||||||||||||||| |||||||| |  || ||||||||||| ||||||||||
Sbjct: 1097 atcagtagctgcggccccagaacgaccacttcttcgctggctttccagatgcaaagcaca 1038

                                                                        
Query: 248  cggttccggaaggaagatctggctggtcaaatggagtacacaaggttttcgcagctccaa 307
             ||| ||    ||||| |||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 1037 gggtaccttctggaagttctggctgctcaaatggagtacacaatgttttcgcagctccaa 978

                                                                        
Query: 308  gttcacctttggtccgagctttcacgtccttctcgacctcctcctcatcacaccatggag 367
            |||| ||||| ||||||| ||| || || ||||| |  ||||||||||||||||||||||
Sbjct: 977  gttccccttttgtccgagtttttacatctttctcaatttcctcctcatcacaccatggag 918

                                                                        
Query: 368  ccaagatcaactttttgtcattgagagctgctatgaattcatcccaagtgctaatgatta 427
            |||||||||||||||||| ||| ||||| | | ||||||||||||||||| | | ||   
Sbjct: 917  ccaagatcaactttttgttattcagagcagttgtgaattcatcccaagtgttcacgacat 858

                                                                        
Query: 428  caatgcaggcatctctctttgctttcgctgtttccaacaagtttgcttgaatcccatcca 487
             ||  ||||||||||||||| |||  |||||||  ||||  |||  ||||||| ||||||
Sbjct: 857  gaacacaggcatctctcttttcttgggctgttttgaacagatttttttgaatctcatcca 798

                                                                        
Query: 488  gcaacactctaacctgctcaaccaagtcggttgaaggaatatcaacctttgcaccattgt 547
            | |||||| ||||||  |||||||| | |||   ||| || |||||||||||||| ||||
Sbjct: 797  gtaacactttaacctcttcaaccaaattggtcacagggatgtcaacctttgcaccgttgt 738

                        
Query: 548  ctcgccggacaa 559
            | || |||||||
Sbjct: 737  cccggcggacaa 726
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>dbj|AK119165.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-E06, full
           insert sequence
          Length = 979

 Score =  236 bits (119), Expect = 7e-59
 Identities = 305/367 (83%)
 Strand = Plus / Minus

                                                                       
Query: 187 gatcaatagctgcggccccagaatgaccacttttgagcaggctttccagaagcaaagcac 246
           ||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||| 
Sbjct: 745 gatcaatagctgcggccccagaatgaccatttcttcgcaggctttccagaagcaaagcat 686

                                                                       
Query: 247 acggttccggaaggaagatctggctggtcaaatggagtacacaaggttttcgcagctcca 306
             ||||||    || ||||||||||| |||||||| |||||||| || || |||||||| 
Sbjct: 685 gtggttccttctgggagatctggctgttcaaatggtgtacacaatgtcttggcagctccc 626

                                                                       
Query: 307 agttcacctttggtccgagctttcacgtccttctcgacctcctcctcatcacaccatgga 366
           || |||||||| |||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 625 aggtcaccttttgtccgagccttcacatccttctcaacttcctcttcatcacaccatgga 566

                                                                       
Query: 367 gccaagatcaactttttgtcattgagagctgctatgaattcatcccaagtgctaatgatt 426
           |||| |||||| ||||||||||| |||||  |||||||||||||||| ||| |||  |  
Sbjct: 565 gccaggatcaattttttgtcattcagagccactatgaattcatcccaggtgttaacaacc 506

                                                                       
Query: 427 acaatgcaggcatctctctttgctttcgctgtttccaacaagtttgcttgaatcccatcc 486
             || ||||||||||||||||  |||||| || || |||||||||   |||| | |||| 
Sbjct: 505 ttaaggcaggcatctctcttttgtttcgccgtctcaaacaagtttttctgaacctcatca 446

                                                                       
Query: 487 agcaacactctaacctgctcaaccaagtcggttgaaggaatatcaacctttgcaccattg 546
           || ||| |  |||| | |||||||||||| |  | |||||||||| | ||||||||||||
Sbjct: 445 agtaacccattaactttctcaaccaagtcagccgtaggaatatcagcttttgcaccattg 386

                  
Query: 547 tctcgcc 553
           |||||||
Sbjct: 385 tctcgcc 379
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>dbj|AK069541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023E12, full
            insert sequence
          Length = 1995

 Score =  236 bits (119), Expect = 7e-59
 Identities = 305/367 (83%)
 Strand = Plus / Minus

                                                                        
Query: 187  gatcaatagctgcggccccagaatgaccacttttgagcaggctttccagaagcaaagcac 246
            ||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||| 
Sbjct: 1815 gatcaatagctgcggccccagaatgaccatttcttcgcaggctttccagaagcaaagcat 1756

                                                                        
Query: 247  acggttccggaaggaagatctggctggtcaaatggagtacacaaggttttcgcagctcca 306
              ||||||    || ||||||||||| |||||||| |||||||| || || |||||||| 
Sbjct: 1755 gtggttccttctgggagatctggctgttcaaatggtgtacacaatgtcttggcagctccc 1696

                                                                        
Query: 307  agttcacctttggtccgagctttcacgtccttctcgacctcctcctcatcacaccatgga 366
            || |||||||| |||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 1695 aggtcaccttttgtccgagccttcacatccttctcaacttcctcttcatcacaccatgga 1636

                                                                        
Query: 367  gccaagatcaactttttgtcattgagagctgctatgaattcatcccaagtgctaatgatt 426
            |||| |||||| ||||||||||| |||||  |||||||||||||||| ||| |||  |  
Sbjct: 1635 gccaggatcaattttttgtcattcagagccactatgaattcatcccaggtgttaacaacc 1576

                                                                        
Query: 427  acaatgcaggcatctctctttgctttcgctgtttccaacaagtttgcttgaatcccatcc 486
              || ||||||||||||||||  |||||| || || |||||||||   |||| | |||| 
Sbjct: 1575 ttaaggcaggcatctctcttttgtttcgccgtctcaaacaagtttttctgaacctcatca 1516

                                                                        
Query: 487  agcaacactctaacctgctcaaccaagtcggttgaaggaatatcaacctttgcaccattg 546
            || ||| |  |||| | |||||||||||| |  | |||||||||| | ||||||||||||
Sbjct: 1515 agtaacccattaactttctcaaccaagtcagccgtaggaatatcagcttttgcaccattg 1456

                   
Query: 547  tctcgcc 553
            |||||||
Sbjct: 1455 tctcgcc 1449
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>dbj|AK104881.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-H01, full
            insert sequence
          Length = 1888

 Score =  228 bits (115), Expect = 2e-56
 Identities = 304/367 (82%)
 Strand = Plus / Minus

                                                                        
Query: 187  gatcaatagctgcggccccagaatgaccacttttgagcaggctttccagaagcaaagcac 246
            ||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||| 
Sbjct: 1654 gatcaatagctgcggccccagaatgaccatttcttcgcaggctttccagaagcaaagcat 1595

                                                                        
Query: 247  acggttccggaaggaagatctggctggtcaaatggagtacacaaggttttcgcagctcca 306
              ||||||    || ||||||||||| |||||||| |||||||| || || |||||||| 
Sbjct: 1594 gtggttccttctgggagatctggctgttcaaatggtgtacacaatgtcttggcagctccc 1535

                                                                        
Query: 307  agttcacctttggtccgagctttcacgtccttctcgacctcctcctcatcacaccatgga 366
            || |||||||| |||||||| ||||| |||||||| || ||||| |||||||||||||||
Sbjct: 1534 aggtcaccttttgtccgagccttcacatccttctcaacttcctcttcatcacaccatgga 1475

                                                                        
Query: 367  gccaagatcaactttttgtcattgagagctgctatgaattcatcccaagtgctaatgatt 426
            |||| |||||| ||||||||||| |||||  |||||||||||||||| ||| |||  |  
Sbjct: 1474 gccaggatcaattttttgtcattcagagccactatgaattcatcccaggtgttaacaacc 1415

                                                                        
Query: 427  acaatgcaggcatctctctttgctttcgctgtttccaacaagtttgcttgaatcccatcc 486
              || ||||||||||||||||  |||||| || || |||||||||   |||| | |||| 
Sbjct: 1414 ttaaggcaggcatctctcttttgtttcgccgtctcaaacaagtttttctgaacctcatca 1355

                                                                        
Query: 487  agcaacactctaacctgctcaaccaagtcggttgaaggaatatcaacctttgcaccattg 546
            || ||| |  |||| | |||||||||||| |  | |||||||||  | ||||||||||||
Sbjct: 1354 agtaacccattaactttctcaaccaagtcagccgtaggaatatcggcttttgcaccattg 1295

                   
Query: 547  tctcgcc 553
            |||||||
Sbjct: 1294 tctcgcc 1288
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  109 bits (55), Expect = 1e-20
 Identities = 169/207 (81%)
 Strand = Plus / Plus

                                                                            
Query: 347      cctcctcatcacaccatggagccaagatcaactttttgtcattgagagctgctatgaatt 406
                |||| ||||||||||||||||||| |||||| ||||||||||| |||||  |||||||||
Sbjct: 14942497 cctcttcatcacaccatggagccaggatcaattttttgtcattcagagccactatgaatt 14942556

                                                                            
Query: 407      catcccaagtgctaatgattacaatgcaggcatctctctttgctttcgctgtttccaaca 466
                ||||||| ||| |||  |    || ||||||||||||||||  |||||| || || ||||
Sbjct: 14942557 catcccaggtgttaacaaccttaaggcaggcatctctcttttgtttcgccgtctcaaaca 14942616

                                                                            
Query: 467      agtttgcttgaatcccatccagcaacactctaacctgctcaaccaagtcggttgaaggaa 526
                |||||   |||| | |||| || ||| |  |||| | |||||||||||| |  | |||||
Sbjct: 14942617 agtttttctgaacctcatcaagtaacccattaactttctcaaccaagtcagccgtaggaa 14942676

                                           
Query: 527      tatcaacctttgcaccattgtctcgcc 553
                ||||| | |||||||||||||||||||
Sbjct: 14942677 tatcagcttttgcaccattgtctcgcc 14942703



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Plus

                                                                           
Query: 187      gatcaatagctgcggccccagaatgaccacttttgagcaggctttccagaagcaaagca 245
                ||||||||||||||||||||||||||||| || |  |||||||||||||||||||||||
Sbjct: 14941698 gatcaatagctgcggccccagaatgaccatttcttcgcaggctttccagaagcaaagca 14941756



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                            
Query: 262      agatctggctggtcaaatggagtacacaaggttttcgcagctccaagttcacctttggtc 321
                ||||||||||| |||||||| |||||||| || || |||||||| || |||||||| |||
Sbjct: 14941917 agatctggctgttcaaatggtgtacacaatgtcttggcagctcccaggtcaccttttgtc 14941976

                                    
Query: 322      cgagctttcacgtccttctc 341
                ||||| ||||| ||||||||
Sbjct: 14941977 cgagccttcacatccttctc 14941996
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  109 bits (55), Expect = 1e-20
 Identities = 169/207 (81%)
 Strand = Plus / Plus

                                                                            
Query: 347      cctcctcatcacaccatggagccaagatcaactttttgtcattgagagctgctatgaatt 406
                |||| ||||||||||||||||||| |||||| ||||||||||| |||||  |||||||||
Sbjct: 14896780 cctcttcatcacaccatggagccaggatcaattttttgtcattcagagccactatgaatt 14896839

                                                                            
Query: 407      catcccaagtgctaatgattacaatgcaggcatctctctttgctttcgctgtttccaaca 466
                ||||||| ||| |||  |    || ||||||||||||||||  |||||| || || ||||
Sbjct: 14896840 catcccaggtgttaacaaccttaaggcaggcatctctcttttgtttcgccgtctcaaaca 14896899

                                                                            
Query: 467      agtttgcttgaatcccatccagcaacactctaacctgctcaaccaagtcggttgaaggaa 526
                |||||   |||| | |||| || ||| |  |||| | |||||||||||| |  | |||||
Sbjct: 14896900 agtttttctgaacctcatcaagtaacccattaactttctcaaccaagtcagccgtaggaa 14896959

                                           
Query: 527      tatcaacctttgcaccattgtctcgcc 553
                ||||| | |||||||||||||||||||
Sbjct: 14896960 tatcagcttttgcaccattgtctcgcc 14896986



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Plus

                                                                           
Query: 187      gatcaatagctgcggccccagaatgaccacttttgagcaggctttccagaagcaaagca 245
                ||||||||||||||||||||||||||||| || |  |||||||||||||||||||||||
Sbjct: 14895981 gatcaatagctgcggccccagaatgaccatttcttcgcaggctttccagaagcaaagca 14896039



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                            
Query: 262      agatctggctggtcaaatggagtacacaaggttttcgcagctccaagttcacctttggtc 321
                ||||||||||| |||||||| |||||||| || || |||||||| || |||||||| |||
Sbjct: 14896200 agatctggctgttcaaatggtgtacacaatgtcttggcagctcccaggtcaccttttgtc 14896259

                                    
Query: 322      cgagctttcacgtccttctc 341
                ||||| ||||| ||||||||
Sbjct: 14896260 cgagccttcacatccttctc 14896279
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>emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa0068D20 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 174521

 Score =  109 bits (55), Expect = 1e-20
 Identities = 169/207 (81%)
 Strand = Plus / Minus

                                                                          
Query: 347    cctcctcatcacaccatggagccaagatcaactttttgtcattgagagctgctatgaatt 406
              |||| ||||||||||||||||||| |||||| ||||||||||| |||||  |||||||||
Sbjct: 139350 cctcttcatcacaccatggagccaggatcaattttttgtcattcagagccactatgaatt 139291

                                                                          
Query: 407    catcccaagtgctaatgattacaatgcaggcatctctctttgctttcgctgtttccaaca 466
              ||||||| ||| |||  |    || ||||||||||||||||  |||||| || || ||||
Sbjct: 139290 catcccaggtgttaacaaccttaaggcaggcatctctcttttgtttcgccgtctcaaaca 139231

                                                                          
Query: 467    agtttgcttgaatcccatccagcaacactctaacctgctcaaccaagtcggttgaaggaa 526
              |||||   |||| | |||| || ||| |  |||| | |||||||||||| |  | |||||
Sbjct: 139230 agtttttctgaacctcatcaagtaacccattaactttctcaaccaagtcagccgtaggaa 139171

                                         
Query: 527    tatcaacctttgcaccattgtctcgcc 553
              ||||| | |||||||||||||||||||
Sbjct: 139170 tatcagcttttgcaccattgtctcgcc 139144



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                         
Query: 187    gatcaatagctgcggccccagaatgaccacttttgagcaggctttccagaagcaaagca 245
              ||||||||||||||||||||||||||||| || |  |||||||||||||||||||||||
Sbjct: 140149 gatcaatagctgcggccccagaatgaccatttcttcgcaggctttccagaagcaaagca 140091



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                          
Query: 262    agatctggctggtcaaatggagtacacaaggttttcgcagctccaagttcacctttggtc 321
              ||||||||||| |||||||| |||||||| || || |||||||| || |||||||| |||
Sbjct: 139930 agatctggctgttcaaatggtgtacacaatgtcttggcagctcccaggtcaccttttgtc 139871

                                  
Query: 322    cgagctttcacgtccttctc 341
              ||||| ||||| ||||||||
Sbjct: 139870 cgagccttcacatccttctc 139851
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>gb|DQ192536.1| Zea mays clone mmp123 genomic sequence
          Length = 250

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 347 cctcctcatcacaccatggagccaagatcaactttttgt 385
           |||||||||| |||||||||||||||| |||||||||||
Sbjct: 199 cctcctcatcgcaccatggagccaagaccaactttttgt 237
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>dbj|AB097405.1| Raphanus sativus RsProRS2 mRNA for prolyl-tRNA synthetase, partial
           cds
          Length = 662

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                       
Query: 265 tctggctggtcaaatggagtacacaaggttttcgcagctccaagttcacctttggtccga 324
           |||||||| |||||||||| ||| | ||||||||| ||||||  ||||||||| || || 
Sbjct: 622 tctggctgctcaaatggagaacagagggttttcgctgctccagtttcacctttagtacgt 563

                                                             
Query: 325 gctttcacgtccttctcgacctcctcctcatcacaccatggagccaagat 374
           || || || ||  |||| || ||||||||||| ||||| ||||| |||||
Sbjct: 562 gccttgacatctctctccacttcctcctcatcgcaccagggagctaagat 513
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>gb|BT013426.1| Lycopersicon esculentum clone 132066F, mRNA sequence
          Length = 1899

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 337  ttctcgacctcctcctcatcacaccatggagccaagatcaa 377
            ||||| || ||||||||||||||||| |||||||| |||||
Sbjct: 1577 ttctcaacatcctcctcatcacaccaaggagccaatatcaa 1537
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>dbj|AP004579.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT11E23, TM0557
          Length = 87695

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 343   acctcctcctcatcacaccatggagccaagatcaacttt 381
             |||||||||||||||||||| || || ||||||| ||||
Sbjct: 63334 acctcctcctcatcacaccaaggtgctaagatcatcttt 63296
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>dbj|AP004576.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01N11, TM0177,
              complete sequence
          Length = 133589

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                     
Query: 343    acctcctcctcatcacaccatggagccaagatcaacttt 381
              |||||||||||||||||||| || || ||||||| ||||
Sbjct: 121675 acctcctcctcatcacaccaaggtgctaagatcatcttt 121713
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>gb|AC098583.2| Homo sapiens BAC clone RP11-10G12 from 4, complete sequence
          Length = 127148

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 111   aatgaaatggaaataaacagatttgccaga 140
             ||||||||| ||||| ||||||||||||||
Sbjct: 98301 aatgaaatgaaaatatacagatttgccaga 98330
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>gb|AC016888.23| Homo sapiens chromosome 17, clone RP11-452I5, complete sequence
          Length = 163597

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 109    tcaatgaaatggaaataaacag 130
              ||||||||||||||||||||||
Sbjct: 163071 tcaatgaaatggaaataaacag 163050
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>gb|AC068874.21| Homo sapiens chromosome 17, clone RP11-399J11, complete sequence
          Length = 174914

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 109    tcaatgaaatggaaataaacag 130
              ||||||||||||||||||||||
Sbjct: 140606 tcaatgaaatggaaataaacag 140627
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>emb|AL583891.15| Mouse DNA sequence from clone RP23-292L2 on chromosome 15, complete
              sequence
          Length = 170132

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 222    agcaggctttccagaagcaaag 243
              ||||||||||||||||||||||
Sbjct: 161566 agcaggctttccagaagcaaag 161587
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>gb|AC005537.2| Homo sapiens BAC clone GS1-308H5 from 7, complete sequence
          Length = 176750

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 111    aatgaaatggaaataaacaga 131
              |||||||||||||||||||||
Sbjct: 135695 aatgaaatggaaataaacaga 135675
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>dbj|AP004967.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT27L02, TM0144,
             complete sequence
          Length = 89959

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 201   gccccagaatgaccacttttgagcaggctttccagaagcaaagca 245
             ||||||| |||||||||||   ||||||||||| || ||||||||
Sbjct: 19162 gccccagtatgaccactttgtcgcaggctttcctgatgcaaagca 19118
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>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07,
             complete sequence
          Length = 164477

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 437   catctctctttgctttcgctgttt 460
             ||||||||||||||||| ||||||
Sbjct: 46064 catctctctttgctttctctgttt 46041
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>gb|AC108504.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1654_B10,
              complete sequence
          Length = 140282

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 437    catctctctttgctttcgctgttt 460
              ||||||||||||||||| ||||||
Sbjct: 114083 catctctctttgctttctctgttt 114060
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>gb|AC137751.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0014E11,
              complete sequence
          Length = 199348

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 343    acctcctcctcatcacacca 362
              ||||||||||||||||||||
Sbjct: 168547 acctcctcctcatcacacca 168528
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>ref|XM_859900.1| PREDICTED: Canis familiaris similar to splicing factor 4 isoform a,
           transcript variant 3 (LOC476661), mRNA
          Length = 1990

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 455 ctgtttccaacaagtttgct 474
           ||||||||||||||||||||
Sbjct: 229 ctgtttccaacaagtttgct 248
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>ref|XM_533865.2| PREDICTED: Canis familiaris similar to splicing factor 4 isoform a,
           transcript variant 1 (LOC476661), mRNA
          Length = 2053

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 455 ctgtttccaacaagtttgct 474
           ||||||||||||||||||||
Sbjct: 229 ctgtttccaacaagtttgct 248
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>ref|XM_859864.1| PREDICTED: Canis familiaris similar to splicing factor 4 isoform a,
           transcript variant 2 (LOC476661), mRNA
          Length = 1014

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 455 ctgtttccaacaagtttgct 474
           ||||||||||||||||||||
Sbjct: 229 ctgtttccaacaagtttgct 248
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>ref|XM_749958.1| Aspergillus fumigatus Af293 nuclear envelope pore membrane protein
            (Afu3g05500) partial mRNA
          Length = 3672

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 523  ggaatatcaacctttgcacc 542
            ||||||||||||||||||||
Sbjct: 2246 ggaatatcaacctttgcacc 2227
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>gb|AC124398.4| Mus musculus BAC clone RP24-349M24 from chromosome 12, complete sequence
          Length = 176369

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 476    gaatcccatccagcaacact 495
              ||||||||||||||||||||
Sbjct: 134575 gaatcccatccagcaacact 134556
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>gb|AC125092.4| Mus musculus BAC clone RP24-174F18 from chromosome 12, complete sequence
          Length = 178746

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 476    gaatcccatccagcaacact 495
              ||||||||||||||||||||
Sbjct: 176071 gaatcccatccagcaacact 176090
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>gb|AC117258.2| Mus musculus BAC clone RP24-491P21 from X, complete sequence
          Length = 161458

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 79    agaaataaaca-gatttgccagaacaaa 105
             ||||||||||| ||||||||||||||||
Sbjct: 33841 agaaataaacatgatttgccagaacaaa 33868
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>emb|AJ301617.1|DRE301617 Danio rerio partial mRNA for Frizzled 7 protein (fz7 gene)
          Length = 1680

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 221  gagcaggctttccagaagca 240
            ||||||||||||||||||||
Sbjct: 1429 gagcaggctttccagaagca 1448
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>emb|AL845333.3| Mouse DNA sequence from clone RP23-245E19 on chromosome 4 Contains part
             of the Ptprd gene for receptor type protein tyrosine
             phosphatase D, complete sequence
          Length = 186256

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 108   gtcaatgaaatggaaataaa 127
             ||||||||||||||||||||
Sbjct: 64531 gtcaatgaaatggaaataaa 64550
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>emb|CR788242.3| Zebrafish DNA sequence from clone DKEY-239H16 in linkage group 13,
              complete sequence
          Length = 143940

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     taagaaataaacagatttgc 96
              ||||||||||||||||||||
Sbjct: 125469 taagaaataaacagatttgc 125488
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>gb|AC154796.2| Mus musculus BAC clone RP24-490B17 from chromosome 17, complete
             sequence
          Length = 161075

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   ttttgagcaggctttccaga 236
             ||||||||||||||||||||
Sbjct: 53181 ttttgagcaggctttccaga 53200
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>gb|AC022495.17| Homo sapiens 3 BAC RP11-94I16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 156054

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    tataagaaataaacagattt 94
             ||||||||||||||||||||
Sbjct: 84489 tataagaaataaacagattt 84470
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>gb|AC008902.5| Homo sapiens chromosome 5 clone CTD-2249G23, complete sequence
          Length = 101352

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 111   aatgaaatggaaataaacagattt 134
             ||||||||||||||||||| ||||
Sbjct: 38454 aatgaaatggaaataaacacattt 38431
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 343      acctcctcctcatcacacca 362
                ||||||||||||||||||||
Sbjct: 25039499 acctcctcctcatcacacca 25039480
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 437    catctctctttgctttcgctgttt 460
              ||||||||||||||||| ||||||
Sbjct: 841641 catctctctttgctttctctgttt 841618
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>gb|AY954953.1| Bacteriophage 85, complete genome
          Length = 44283

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 407   catcccaagtgctaatgatt 426
             ||||||||||||||||||||
Sbjct: 24891 catcccaagtgctaatgatt 24910
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>gb|AC141636.4| Mus musculus BAC clone RP23-471D17 from chromosome 19, complete
             sequence
          Length = 165424

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   ggctttccagaagcaaagca 245
             ||||||||||||||||||||
Sbjct: 99168 ggctttccagaagcaaagca 99187
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 343      acctcctcctcatcacacca 362
                ||||||||||||||||||||
Sbjct: 25351089 acctcctcctcatcacacca 25351070
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>gb|AF252829.4| Homo sapiens chromosome 8 clone RP11-495D4 map 8q24.2, complete sequence
          Length = 199668

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 343    acctcctcctcatcacacca 362
              ||||||||||||||||||||
Sbjct: 131419 acctcctcctcatcacacca 131400


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,534,124
Number of Sequences: 3902068
Number of extensions: 5534124
Number of successful extensions: 102570
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 102330
Number of HSP's gapped (non-prelim): 237
length of query: 578
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 555
effective length of database: 17,143,297,704
effective search space: 9514530225720
effective search space used: 9514530225720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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