ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags7l05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_506822.1| PREDICTED Oryza sativa (japonica cultivar-group... 167 6e-38
2ref|XM_466189.1| Oryza sativa (japonica cultivar-group), mRNA 167 6e-38
3dbj|AK069920.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 6e-38
4dbj|AK060250.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 1e-35
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
6dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
7ref|XM_472578.1| Oryza sativa (japonica cultivar-group), predic... 96 2e-16
8dbj|AK100857.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 2e-16
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
10emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4,... 88 4e-14
11gb|AY108662.1| Zea mays PCO146921 mRNA sequence 66 2e-07
12emb|BX901942.6| Zebrafish DNA sequence from clone DKEY-121B10 in... 46 0.14
13emb|BX119977.10| Zebrafish DNA sequence from clone CH211-198A3 i... 46 0.14
14emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS... 44 0.56
15ref|XM_509390.1| PREDICTED: Pan troglodytes similar to hypotheti... 42 2.2
16emb|CR450852.9| Zebrafish DNA sequence from clone DKEY-67C24 in ... 42 2.2
17emb|CR847563.12| Zebrafish DNA sequence from clone CH211-202H14 ... 42 2.2
18emb|CR382377.10| Zebrafish DNA sequence from clone DKEY-238I13 i... 42 2.2
19emb|CR933822.8| Zebrafish DNA sequence from clone DKEY-30F7 in l... 42 2.2
20emb|CR855378.6| Zebrafish DNA sequence from clone CH211-284K16 i... 42 2.2
21emb|BX323088.13| Zebrafish DNA sequence from clone DKEY-112M2 in... 42 2.2
22emb|AL807389.7| Zebrafish DNA sequence from clone CH211-237L4 in... 42 2.2
23emb|BX936305.18| Zebrafish DNA sequence from clone CH211-51N3 in... 42 2.2
24emb|BX511257.16| Zebrafish DNA sequence from clone DKEY-280E21 i... 42 2.2
25emb|BX548033.9| Zebrafish DNA sequence from clone CH211-232E6 in... 42 2.2
26emb|CR381694.8| Zebrafish DNA sequence from clone CH211-55I2 in ... 42 2.2
27emb|CR381585.11| Zebrafish DNA sequence from clone DKEY-27P7 in ... 42 2.2
28emb|BX510997.9| Zebrafish DNA sequence from clone CH211-253F2 in... 42 2.2
29emb|BX936356.18| Zebrafish DNA sequence from clone DKEY-57P14 in... 42 2.2
30emb|BX005438.16| Zebrafish DNA sequence from clone DKEY-3E9 in l... 42 2.2
31emb|BX914217.19| Zebrafish DNA sequence from clone DKEY-175H14 i... 42 2.2
32emb|BX890611.8| Zebrafish DNA sequence from clone DKEYP-86H10, c... 42 2.2
33emb|BX663499.5| Zebrafish DNA sequence from clone CH211-160I2 in... 42 2.2
34emb|BX649321.4| Zebrafish DNA sequence from clone DKEY-242D22 in... 42 2.2
35gb|AC004217.1| Homo sapiens 12 PAC RPCI3-521E19 (Roswell Park Ca... 42 2.2
36emb|BX539308.3| Zebrafish DNA sequence from clone DKEYP-84C8 in ... 42 2.2
37emb|BX005472.11| Zebrafish DNA sequence from clone CH211-119C22 ... 42 2.2
38emb|BX005398.6| Zebrafish DNA sequence from clone CH211-207O17, ... 42 2.2
39emb|AL929019.4| Zebrafish DNA sequence from clone CH211-149L13, ... 42 2.2
40emb|AL928977.10| Zebrafish DNA sequence from clone DKEY-24D19 in... 42 2.2
41emb|CR932358.4| Zebrafish DNA sequence from clone DKEY-105J12 in... 42 2.2
42emb|BX255897.3| Zebrafish DNA sequence from clone DKEY-263B2 in ... 42 2.2
43emb|BX936317.16| Zebrafish DNA sequence from clone CH211-208C9 i... 42 2.2
44emb|AL953843.6| Zebrafish DNA sequence from clone DKEY-42P8 in l... 42 2.2
45emb|BX293564.5| Zebrafish DNA sequence from clone DKEYP-7F8 in l... 42 2.2
46emb|CR450775.6| Zebrafish DNA sequence from clone DKEY-121H11 in... 42 2.2
47emb|AL844522.7| Zebrafish DNA sequence from clone DKEY-113M9, co... 42 2.2
48emb|AL929022.7| Zebrafish DNA sequence from clone CH211-112F3, c... 42 2.2
49emb|CR407545.9| Zebrafish DNA sequence from clone CH211-197E20 i... 42 2.2
50emb|CR628370.28| Zebrafish DNA sequence from clone DKEY-33L16 in... 42 2.2
51ref|NM_125918.2| Arabidopsis thaliana oxidoreductase AT5G65205 m... 40 8.7
52gb|AC102380.6| Mus musculus chromosome 3, clone RP24-179F24, com... 40 8.7
53gb|AY342361.1| Emiliania huxleyi mitochondrion, complete genome 40 8.7
54gb|AC124508.5| Mus musculus BAC clone RP23-433B5 from chromosome... 40 8.7
55gb|AC125316.4| Mus musculus BAC clone RP24-250N3 from chromosome... 40 8.7
56emb|CR513784.8| Zebrafish DNA sequence from clone CH211-286B4 in... 40 8.7
57emb|AL365361.12| Human DNA sequence from clone RP11-284N8 on chr... 40 8.7
58emb|AL132655.13|HSJ806M20 Human DNA sequence from clone RP4-806M... 40 8.7
59emb|AJ313303.1|UBA313303 Uncultured bacterium partial nifH gene ... 40 8.7
60gb|AC130893.3| Homo sapiens X BAC RP13-926M18 (Roswell Park Canc... 40 8.7
61emb|CR381704.5| Zebrafish DNA sequence from clone CH211-202F6 in... 40 8.7
62emb|BX324195.8| Zebrafish DNA sequence from clone CH211-288O15 i... 40 8.7
63gb|AY669537.1| Cortinarius aleuriosmus voucher TUB 011840 18S ri... 40 8.7
64dbj|AP008931.1| Rhodococcus erythropolis PR4 plasmid pREL1, comp... 40 8.7
65gb|AY028080.1| Mus musculus pericentriolar material gene 1 prote... 40 8.7
66gb|AY096105.1|AY096105S1 Vibrio vulnificus super-integron, parti... 40 8.7
67emb|BX511010.5| Zebrafish DNA sequence from clone CH211-79L20 in... 40 8.7
68dbj|AB013395.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.7
69emb|BX248238.5| Zebrafish DNA sequence from clone CH211-169J21 i... 40 8.7
70emb|BX000467.10| Zebrafish DNA sequence from clone CH211-1K7 in ... 40 8.7 
>ref|XM_506822.1| PREDICTED Oryza sativa (japonica cultivar-group), P0470G10.15 mRNA
          Length = 1691

 Score =  167 bits (84), Expect = 6e-38
 Identities = 218/260 (83%), Gaps = 2/260 (0%)
 Strand = Plus / Minus

                                                                        
Query: 381  atcgctccgaaggtgagacccagactttaactgtcattggaacaacgtttgatgactcca 440
            ||||||| || || |||||||| |||||| ||| |||||| ||  | |||||||| ||||
Sbjct: 1295 atcgctctgatggcgagacccaaactttagctgacattgggacggcttttgatgattcca 1236

                                                                        
Query: 441  actgcttgcaagcagacccgtccaggcttagggcatcgatcatcttggggcgtgttcctg 500
             |||||||||||| || || |||  ||| | ||||||||||||||||||   ||||||| 
Sbjct: 1235 gctgcttgcaagctgatccatccgagctcaaggcatcgatcatcttgggta-tgttccta 1177

                                                                        
Query: 501  tcgattatttcaccatgaccaagctgtccactggcacccctgccccatgagaaaatattc 560
            || | |||||||||||| ||||||||||||||||  ||||| ||||||||||||| ||| 
Sbjct: 1176 tcaactatttcaccatggccaagctgtccactggtgccccttccccatgagaaaacattt 1117

                                                                        
Query: 561  ttgttttctgtcagggcaagagtatgcctccatccacaggcaacctgtacaattttcttg 620
            |||  |||||||||||||||||| |||||||||||||| ||||| || |||| |||| ||
Sbjct: 1116 ttggcttctgtcagggcaagagtgtgcctccatccacaagcaacttgaacaactttc-tg 1058

                                
Query: 621  ttcgtcaggaaaattcacct 640
            |||||  |||||||| ||||
Sbjct: 1057 ttcgtttggaaaattgacct 1038
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>ref|XM_466189.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1675

 Score =  167 bits (84), Expect = 6e-38
 Identities = 218/260 (83%), Gaps = 2/260 (0%)
 Strand = Plus / Minus

                                                                        
Query: 381  atcgctccgaaggtgagacccagactttaactgtcattggaacaacgtttgatgactcca 440
            ||||||| || || |||||||| |||||| ||| |||||| ||  | |||||||| ||||
Sbjct: 1296 atcgctctgatggcgagacccaaactttagctgacattgggacggcttttgatgattcca 1237

                                                                        
Query: 441  actgcttgcaagcagacccgtccaggcttagggcatcgatcatcttggggcgtgttcctg 500
             |||||||||||| || || |||  ||| | ||||||||||||||||||   ||||||| 
Sbjct: 1236 gctgcttgcaagctgatccatccgagctcaaggcatcgatcatcttgggta-tgttccta 1178

                                                                        
Query: 501  tcgattatttcaccatgaccaagctgtccactggcacccctgccccatgagaaaatattc 560
            || | |||||||||||| ||||||||||||||||  ||||| ||||||||||||| ||| 
Sbjct: 1177 tcaactatttcaccatggccaagctgtccactggtgccccttccccatgagaaaacattt 1118

                                                                        
Query: 561  ttgttttctgtcagggcaagagtatgcctccatccacaggcaacctgtacaattttcttg 620
            |||  |||||||||||||||||| |||||||||||||| ||||| || |||| |||| ||
Sbjct: 1117 ttggcttctgtcagggcaagagtgtgcctccatccacaagcaacttgaacaactttc-tg 1059

                                
Query: 621  ttcgtcaggaaaattcacct 640
            |||||  |||||||| ||||
Sbjct: 1058 ttcgtttggaaaattgacct 1039
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>dbj|AK069920.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039G23, full
            insert sequence
          Length = 1675

 Score =  167 bits (84), Expect = 6e-38
 Identities = 218/260 (83%), Gaps = 2/260 (0%)
 Strand = Plus / Minus

                                                                        
Query: 381  atcgctccgaaggtgagacccagactttaactgtcattggaacaacgtttgatgactcca 440
            ||||||| || || |||||||| |||||| ||| |||||| ||  | |||||||| ||||
Sbjct: 1296 atcgctctgatggcgagacccaaactttagctgacattgggacggcttttgatgattcca 1237

                                                                        
Query: 441  actgcttgcaagcagacccgtccaggcttagggcatcgatcatcttggggcgtgttcctg 500
             |||||||||||| || || |||  ||| | ||||||||||||||||||   ||||||| 
Sbjct: 1236 gctgcttgcaagctgatccatccgagctcaaggcatcgatcatcttgggta-tgttccta 1178

                                                                        
Query: 501  tcgattatttcaccatgaccaagctgtccactggcacccctgccccatgagaaaatattc 560
            || | |||||||||||| ||||||||||||||||  ||||| ||||||||||||| ||| 
Sbjct: 1177 tcaactatttcaccatggccaagctgtccactggtgccccttccccatgagaaaacattt 1118

                                                                        
Query: 561  ttgttttctgtcagggcaagagtatgcctccatccacaggcaacctgtacaattttcttg 620
            |||  |||||||||||||||||| |||||||||||||| ||||| || |||| |||| ||
Sbjct: 1117 ttggcttctgtcagggcaagagtgtgcctccatccacaagcaacttgaacaactttc-tg 1059

                                
Query: 621  ttcgtcaggaaaattcacct 640
            |||||  |||||||| ||||
Sbjct: 1058 ttcgtttggaaaattgacct 1039
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>dbj|AK060250.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-B02, full
            insert sequence
          Length = 1691

 Score =  159 bits (80), Expect = 1e-35
 Identities = 217/260 (83%), Gaps = 2/260 (0%)
 Strand = Plus / Minus

                                                                        
Query: 381  atcgctccgaaggtgagacccagactttaactgtcattggaacaacgtttgatgactcca 440
            ||||||| || || |||||||| |||||| ||| |||||| ||  | |||||||| ||||
Sbjct: 1295 atcgctctgatggcgagacccaaactttagctgacattgggacggcttttgatgattcca 1236

                                                                        
Query: 441  actgcttgcaagcagacccgtccaggcttagggcatcgatcatcttggggcgtgttcctg 500
             |||||||||||| || || |||  ||| | |||||| |||||||||||   ||||||| 
Sbjct: 1235 gctgcttgcaagctgatccatccgagctcaaggcatctatcatcttgggta-tgttccta 1177

                                                                        
Query: 501  tcgattatttcaccatgaccaagctgtccactggcacccctgccccatgagaaaatattc 560
            || | |||||||||||| ||||||||||||||||  ||||| ||||||||||||| ||| 
Sbjct: 1176 tcaactatttcaccatggccaagctgtccactggtgccccttccccatgagaaaacattt 1117

                                                                        
Query: 561  ttgttttctgtcagggcaagagtatgcctccatccacaggcaacctgtacaattttcttg 620
            |||  |||||||||||||||||| |||||||||||||| ||||| || |||| |||| ||
Sbjct: 1116 ttggcttctgtcagggcaagagtgtgcctccatccacaagcaacttgaacaactttc-tg 1058

                                
Query: 621  ttcgtcaggaaaattcacct 640
            |||||  |||||||| ||||
Sbjct: 1057 ttcgtttggaaaattgacct 1038
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  121 bits (61), Expect = 3e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                            
Query: 506      tatttcaccatgaccaagctgtccactggcacccctgccccatgagaaaatattcttgtt 565
                |||||||||||| ||||||||||||||||  ||||| ||||||||||||| ||| |||  
Sbjct: 20937432 tatttcaccatggccaagctgtccactggtgccccttccccatgagaaaacatttttggc 20937373

                                                                     
Query: 566      ttctgtcagggcaagagtatgcctccatccacaggcaacctgtacaattttct 618
                |||||||||||||||||| |||||||||||||| ||||| || |||| |||||
Sbjct: 20937372 ttctgtcagggcaagagtgtgcctccatccacaagcaacttgaacaactttct 20937320



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                            
Query: 428      tttgatgactccaactgcttgcaagcagacccgtccaggcttagggcatcgatcatcttg 487
                |||||||| |||| |||||||||||| || || |||  ||| | ||||||||||||||||
Sbjct: 20937608 tttgatgattccagctgcttgcaagctgatccatccgagctcaaggcatcgatcatcttg 20937549

                  
Query: 488      gg 489
                ||
Sbjct: 20937548 gg 20937547
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>dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0470G10
          Length = 145419

 Score =  121 bits (61), Expect = 3e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                         
Query: 506   tatttcaccatgaccaagctgtccactggcacccctgccccatgagaaaatattcttgtt 565
             |||||||||||| ||||||||||||||||  ||||| ||||||||||||| ||| |||  
Sbjct: 60904 tatttcaccatggccaagctgtccactggtgccccttccccatgagaaaacatttttggc 60845

                                                                  
Query: 566   ttctgtcagggcaagagtatgcctccatccacaggcaacctgtacaattttct 618
             |||||||||||||||||| |||||||||||||| ||||| || |||| |||||
Sbjct: 60844 ttctgtcagggcaagagtgtgcctccatccacaagcaacttgaacaactttct 60792



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                         
Query: 428   tttgatgactccaactgcttgcaagcagacccgtccaggcttagggcatcgatcatcttg 487
             |||||||| |||| |||||||||||| || || |||  ||| | ||||||||||||||||
Sbjct: 61080 tttgatgattccagctgcttgcaagctgatccatccgagctcaaggcatcgatcatcttg 61021

               
Query: 488   gg 489
             ||
Sbjct: 61020 gg 61019
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>ref|XM_472578.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1362

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                        
Query: 493  tgttcctgtcgattatttcaccatgaccaagctgtccactggcacccctgccccatgaga 552
            |||||||||| | |||||||||||||||||| ||||| || | |||||| ||||||||||
Sbjct: 1135 tgttcctgtcaactatttcaccatgaccaagttgtccgctagtacccctcccccatgaga 1076

                                                    
Query: 553  aaatattcttgttttctgtcagggcaagagtatgcctcca 592
            ||| ||| || |||||||| |  |||||||||||||||||
Sbjct: 1075 aaacatttttcttttctgtaaatgcaagagtatgcctcca 1036
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>dbj|AK100857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123M01, full
            insert sequence
          Length = 2021

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                        
Query: 493  tgttcctgtcgattatttcaccatgaccaagctgtccactggcacccctgccccatgaga 552
            |||||||||| | |||||||||||||||||| ||||| || | |||||| ||||||||||
Sbjct: 1478 tgttcctgtcaactatttcaccatgaccaagttgtccgctagtacccctcccccatgaga 1419

                                                    
Query: 553  aaatattcttgttttctgtcagggcaagagtatgcctcca 592
            ||| ||| || |||||||| |  |||||||||||||||||
Sbjct: 1418 aaacatttttcttttctgtaaatgcaagagtatgcctcca 1379
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                            
Query: 497      cctgtcgattatttcaccatgaccaagctgtccactggcacccctgccccatgagaaaat 556
                |||||| | |||||||||||||||||| ||||| || | |||||| ||||||||||||| 
Sbjct: 21695592 cctgtcaactatttcaccatgaccaagttgtccgctagtacccctcccccatgagaaaac 21695533

                                                    
Query: 557      attcttgttttctgtcagggcaagagtatgcctcca 592
                ||| || |||||||| |  |||||||||||||||||
Sbjct: 21695532 atttttcttttctgtaaatgcaagagtatgcctcca 21695497
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>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20,
            complete sequence
          Length = 141915

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                        
Query: 497  cctgtcgattatttcaccatgaccaagctgtccactggcacccctgccccatgagaaaat 556
            |||||| | |||||||||||||||||| ||||| || | |||||| ||||||||||||| 
Sbjct: 7209 cctgtcaactatttcaccatgaccaagttgtccgctagtacccctcccccatgagaaaac 7150

                                                
Query: 557  attcttgttttctgtcagggcaagagtatgcctcca 592
            ||| || |||||||| |  |||||||||||||||||
Sbjct: 7149 atttttcttttctgtaaatgcaagagtatgcctcca 7114
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>gb|AY108662.1| Zea mays PCO146921 mRNA sequence
          Length = 2037

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 142/177 (80%), Gaps = 1/177 (0%)
 Strand = Plus / Minus

                                                                        
Query: 431  gatgactccaactgcttgcaagcagacccgtccaggcttagggcatcgatcatcttgggg 490
            |||||||||| || |||||| ||||| |||||   ||| ||||||||||||| |   || 
Sbjct: 1508 gatgactccagcttcttgcaggcagaaccgtctgagctcagggcatcgatcagcacagg- 1450

                                                                        
Query: 491  cgtgttcctgtcgattatttcaccatgaccaagctgtccactggcacccctgccccatga 550
            |||||||||||||| ||||||||| |  || |||||||| || |  ||||| ||||| ||
Sbjct: 1449 cgtgttcctgtcgactatttcaccgttgccgagctgtccgctagtgcccctcccccagga 1390

                                                                     
Query: 551  gaaaatattcttgttttctgtcagggcaagagtatgcctccatccacaggcaacctg 607
            ||| | ||| || || || |  ||||| ||||||||||||||||| || ||||||||
Sbjct: 1389 gaagacatttttcttctcggagagggccagagtatgcctccatccgcatgcaacctg 1333
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>emb|BX901942.6| Zebrafish DNA sequence from clone DKEY-121B10 in linkage group 1,
             complete sequence
          Length = 166521

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 136   tcattaaatacatcattacttca 158
             |||||||||||||||||||||||
Sbjct: 69336 tcattaaatacatcattacttca 69358
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>emb|BX119977.10| Zebrafish DNA sequence from clone CH211-198A3 in linkage group 7,
              complete sequence
          Length = 182186

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 136    tcattaaatacatcattacttca 158
              |||||||||||||||||||||||
Sbjct: 124965 tcattaaatacatcattacttca 124987
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>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces
               hansenii
          Length = 2051428

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 199     agtagtagatggtgaatgagaaagtt 224
               ||||||||||||| ||||||||||||
Sbjct: 1395903 agtagtagatggttaatgagaaagtt 1395928
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>ref|XM_509390.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ34154
            (LOC452264), mRNA
          Length = 1614

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 132  tacatcattaaatacatcatt 152
            |||||||||||||||||||||
Sbjct: 1032 tacatcattaaatacatcatt 1052
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>emb|CR450852.9| Zebrafish DNA sequence from clone DKEY-67C24 in linkage group 12,
              complete sequence
          Length = 165449

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 132    tacatcattaaatacatcatt 152
              |||||||||||||||||||||
Sbjct: 155985 tacatcattaaatacatcatt 156005
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>emb|CR847563.12| Zebrafish DNA sequence from clone CH211-202H14 in linkage group 11,
              complete sequence
          Length = 204337

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 138    attaaatacatcattacttca 158
              |||||||||||||||||||||
Sbjct: 109619 attaaatacatcattacttca 109599
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>emb|CR382377.10| Zebrafish DNA sequence from clone DKEY-238I13 in linkage group 17,
             complete sequence
          Length = 105441

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 138   attaaatacatcattacttca 158
             |||||||||||||||||||||
Sbjct: 23029 attaaatacatcattacttca 23049
to top
>emb|CR933822.8| Zebrafish DNA sequence from clone DKEY-30F7 in linkage group 19,
             complete sequence
          Length = 187377

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 138   attaaatacatcattacttca 158
             |||||||||||||||||||||
Sbjct: 55919 attaaatacatcattacttca 55899
to top
>emb|CR855378.6| Zebrafish DNA sequence from clone CH211-284K16 in linkage group 14,
             complete sequence
          Length = 151573

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 138   attaaatacatcattacttca 158
             |||||||||||||||||||||
Sbjct: 78545 attaaatacatcattacttca 78525
to top
>emb|BX323088.13| Zebrafish DNA sequence from clone DKEY-112M2 in linkage group 21,
             complete sequence
          Length = 248571

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 138   attaaatacatcattacttca 158
             |||||||||||||||||||||
Sbjct: 70766 attaaatacatcattacttca 70786
to top
>emb|AL807389.7| Zebrafish DNA sequence from clone CH211-237L4 in linkage group 10
             Contains a novel gene similar to human KIAA0346, two novel
             genes, a novel gene similar to human and fugu PCOLCE
             (procollagen C-endopeptidase enhancer), the per1 gene for
             period homolog 1 (Drosophila), a novel gene similar to
             vertebrate VAMP2 (vesicle-associated membrane protein 2,
             synaptobrevin 2) and a novel gene similar to human and
             mouse AP4M1 (adaptor-related protein complex 4, mu 1
             subunit), complete sequence
          Length = 143672

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 138   attaaatacatcattacttca 158
             |||||||||||||||||||||
Sbjct: 89989 attaaatacatcattacttca 90009
to top
>emb|BX936305.18| Zebrafish DNA sequence from clone CH211-51N3 in linkage group 13,
             complete sequence
          Length = 150383

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 138   attaaatacatcattacttca 158
             |||||||||||||||||||||
Sbjct: 85578 attaaatacatcattacttca 85558
to top
>emb|BX511257.16| Zebrafish DNA sequence from clone DKEY-280E21 in linkage group 14,
              complete sequence
          Length = 166973

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 138    attaaatacatcattacttca 158
              |||||||||||||||||||||
Sbjct: 126922 attaaatacatcattacttca 126902
to top
>emb|BX548033.9| Zebrafish DNA sequence from clone CH211-232E6 in linkage group 8,
             complete sequence
          Length = 170974

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 138   attaaatacatcattacttca 158
             |||||||||||||||||||||
Sbjct: 64514 attaaatacatcattacttca 64534
to top
>emb|CR381694.8| Zebrafish DNA sequence from clone CH211-55I2 in linkage group 10,
             complete sequence
          Length = 178736

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 138   attaaatacatcattacttca 158
             |||||||||||||||||||||
Sbjct: 85156 attaaatacatcattacttca 85136
to top
>emb|CR381585.11| Zebrafish DNA sequence from clone DKEY-27P7 in linkage group 20 Contains
              the gene for a novel protein similar to mouse and human
              integrin beta 1 binding protein 1 (ITGB1BP1), the gene for
              a novel protein similar to vertebrate development and
              differentiation enhancing factor 2 (DDEF2) and three CpG
              islands, complete sequence
          Length = 209698

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 138    attaaatacatcattacttca 158
              |||||||||||||||||||||
Sbjct: 177144 attaaatacatcattacttca 177164
to top
>emb|BX510997.9| Zebrafish DNA sequence from clone CH211-253F2 in linkage group 25,
             complete sequence
          Length = 104617

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 138   attaaatacatcattacttca 158
             |||||||||||||||||||||
Sbjct: 19319 attaaatacatcattacttca 19339
to top
>emb|BX936356.18| Zebrafish DNA sequence from clone DKEY-57P14 in linkage group 21,
              complete sequence
          Length = 243377

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 138    attaaatacatcattacttca 158
              |||||||||||||||||||||
Sbjct: 144222 attaaatacatcattacttca 144202
to top
>emb|BX005438.16| Zebrafish DNA sequence from clone DKEY-3E9 in linkage group 9, complete
             sequence
          Length = 124192

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 138   attaaatacatcattacttca 158
             |||||||||||||||||||||
Sbjct: 33019 attaaatacatcattacttca 33039
to top
>emb|BX914217.19| Zebrafish DNA sequence from clone DKEY-175H14 in linkage group 18,
             complete sequence
          Length = 133981

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 138   attaaatacatcattacttca 158
             |||||||||||||||||||||
Sbjct: 56533 attaaatacatcattacttca 56553
to top
>emb|BX890611.8| Zebrafish DNA sequence from clone DKEYP-86H10, complete sequence
          Length = 181642

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 138    attaaatacatcattacttca 158
              |||||||||||||||||||||
Sbjct: 152059 attaaatacatcattacttca 152079
to top
>emb|BX663499.5| Zebrafish DNA sequence from clone CH211-160I2 in linkage group 2,
              complete sequence
          Length = 195369

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 138    attaaatacatcattacttca 158
              |||||||||||||||||||||
Sbjct: 191912 attaaatacatcattacttca 191932
to top
>emb|BX649321.4| Zebrafish DNA sequence from clone DKEY-242D22 in linkage group 1,
             complete sequence
          Length = 89729

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 138   attaaatacatcattacttca 158
             |||||||||||||||||||||
Sbjct: 82474 attaaatacatcattacttca 82494
to top
>gb|AC004217.1| Homo sapiens 12 PAC RPCI3-521E19 (Roswell Park Cancer Institute Human
             PAC library) complete sequence
          Length = 103319

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 132   tacatcattaaatacatcatt 152
             |||||||||||||||||||||
Sbjct: 95162 tacatcattaaatacatcatt 95182
to top
>emb|BX539308.3| Zebrafish DNA sequence from clone DKEYP-84C8 in linkage group 1,
             complete sequence
          Length = 176769

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 138   attaaatacatcattacttca 158
             |||||||||||||||||||||
Sbjct: 25928 attaaatacatcattacttca 25948
to top
>emb|BX005472.11| Zebrafish DNA sequence from clone CH211-119C22 in linkage group 11,
             complete sequence
          Length = 158170

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 138   attaaatacatcattacttca 158
             |||||||||||||||||||||
Sbjct: 36028 attaaatacatcattacttca 36048
to top
>emb|BX005398.6| Zebrafish DNA sequence from clone CH211-207O17, complete sequence
          Length = 209859

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 138   attaaatacatcattacttca 158
             |||||||||||||||||||||
Sbjct: 85843 attaaatacatcattacttca 85863
to top
>emb|AL929019.4| Zebrafish DNA sequence from clone CH211-149L13, complete sequence
          Length = 149316

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 138   attaaatacatcattacttca 158
             |||||||||||||||||||||
Sbjct: 82892 attaaatacatcattacttca 82912
to top
>emb|AL928977.10| Zebrafish DNA sequence from clone DKEY-24D19 in linkage group 20,
             complete sequence
          Length = 165014

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 138   attaaatacatcattacttca 158
             |||||||||||||||||||||
Sbjct: 47788 attaaatacatcattacttca 47808
to top
>emb|CR932358.4| Zebrafish DNA sequence from clone DKEY-105J12 in linkage group 12,
              complete sequence
          Length = 138570

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 138    attaaatacatcattacttca 158
              |||||||||||||||||||||
Sbjct: 100480 attaaatacatcattacttca 100500
to top
>emb|BX255897.3| Zebrafish DNA sequence from clone DKEY-263B2 in linkage group 20,
             complete sequence
          Length = 181862

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 138   attaaatacatcattacttca 158
             |||||||||||||||||||||
Sbjct: 21419 attaaatacatcattacttca 21399
to top
>emb|BX936317.16| Zebrafish DNA sequence from clone CH211-208C9 in linkage group 20,
              complete sequence
          Length = 208051

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 138    attaaatacatcattacttca 158
              |||||||||||||||||||||
Sbjct: 186281 attaaatacatcattacttca 186301
to top
>emb|AL953843.6| Zebrafish DNA sequence from clone DKEY-42P8 in linkage group 22, complete
              sequence
          Length = 212575

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 138    attaaatacatcattacttca 158
              |||||||||||||||||||||
Sbjct: 205165 attaaatacatcattacttca 205185
to top
>emb|BX293564.5| Zebrafish DNA sequence from clone DKEYP-7F8 in linkage group 20,
             complete sequence
          Length = 145495

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 138   attaaatacatcattacttca 158
             |||||||||||||||||||||
Sbjct: 65433 attaaatacatcattacttca 65413
to top
>emb|CR450775.6| Zebrafish DNA sequence from clone DKEY-121H11 in linkage group 10,
             complete sequence
          Length = 132227

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 138   attaaatacatcattacttca 158
             |||||||||||||||||||||
Sbjct: 80665 attaaatacatcattacttca 80685
to top
>emb|AL844522.7| Zebrafish DNA sequence from clone DKEY-113M9, complete sequence
          Length = 193193

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 138  attaaatacatcattacttca 158
            |||||||||||||||||||||
Sbjct: 5012 attaaatacatcattacttca 5032
to top
>emb|AL929022.7| Zebrafish DNA sequence from clone CH211-112F3, complete sequence
          Length = 179671

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 138    attaaatacatcattacttca 158
              |||||||||||||||||||||
Sbjct: 120965 attaaatacatcattacttca 120985
to top
>emb|CR407545.9| Zebrafish DNA sequence from clone CH211-197E20 in linkage group 25,
             complete sequence
          Length = 103187

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 138   attaaatacatcattacttca 158
             |||||||||||||||||||||
Sbjct: 76394 attaaatacatcattacttca 76374
to top
>emb|CR628370.28| Zebrafish DNA sequence from clone DKEY-33L16 in linkage group 22,
              complete sequence
          Length = 190967

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 138    attaaatacatcattacttca 158
              |||||||||||||||||||||
Sbjct: 177621 attaaatacatcattacttca 177641
to top
>ref|NM_125918.2| Arabidopsis thaliana oxidoreductase AT5G65205 mRNA, complete cds
          Length = 981

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 87  taccttgattaatcctttta 106
           ||||||||||||||||||||
Sbjct: 961 taccttgattaatcctttta 942
to top
>gb|AC102380.6| Mus musculus chromosome 3, clone RP24-179F24, complete sequence
          Length = 169209

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 546   catgagaaaatattcttgtt 565
             ||||||||||||||||||||
Sbjct: 14138 catgagaaaatattcttgtt 14119
to top
>gb|AY342361.1| Emiliania huxleyi mitochondrion, complete genome
          Length = 29013

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   tgcagaactctagtagtaga 130
             ||||||||||||||||||||
Sbjct: 27575 tgcagaactctagtagtaga 27556
to top
>gb|AC124508.5| Mus musculus BAC clone RP23-433B5 from chromosome 7, complete sequence
          Length = 188011

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   aaactgggcatcatgtacac 197
             ||||||||||||||||||||
Sbjct: 43182 aaactgggcatcatgtacac 43201
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>gb|AC125316.4| Mus musculus BAC clone RP24-250N3 from chromosome 3, complete sequence
          Length = 138128

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 546    catgagaaaatattcttgtt 565
              ||||||||||||||||||||
Sbjct: 106752 catgagaaaatattcttgtt 106733
to top
>emb|CR513784.8| Zebrafish DNA sequence from clone CH211-286B4 in linkage group 15,
              complete sequence
          Length = 166308

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 438    ccaactgcttgcaagcagac 457
              ||||||||||||||||||||
Sbjct: 121332 ccaactgcttgcaagcagac 121313
to top
>emb|AL365361.12| Human DNA sequence from clone RP11-284N8 on chromosome 1 Contains the
             KCNA2 gene for a potassium voltage-gated channel from the
             shaker-related subfamily member 2, the KCNA3 gene for a
             potassium voltage-gated channel from the shaker-related
             subfamily member 3 and two CpG islands, complete sequence
          Length = 193182

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 507   atttcaccatgaccaagctg 526
             ||||||||||||||||||||
Sbjct: 89317 atttcaccatgaccaagctg 89336
to top
>emb|AL132655.13|HSJ806M20 Human DNA sequence from clone RP4-806M20 on chromosome 20 Contains a
             novel pseudogene, the 5' end of the GNAS complex locus and
             a CpG island, complete sequence
          Length = 126586

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 524   ctgtccactggcacccctgc 543
             ||||||||||||||||||||
Sbjct: 19034 ctgtccactggcacccctgc 19015
to top
>emb|AJ313303.1|UBA313303 Uncultured bacterium partial nifH gene for nitrogenase Fe protein,
           clone S8
          Length = 339

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 129 gagtacatcattaaatacat 148
           ||||||||||||||||||||
Sbjct: 258 gagtacatcattaaatacat 239
to top
>gb|AC130893.3| Homo sapiens X BAC RP13-926M18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 110999

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 550   agaaaatattcttgttttct 569
             ||||||||||||||||||||
Sbjct: 27513 agaaaatattcttgttttct 27494
to top
>emb|CR381704.5| Zebrafish DNA sequence from clone CH211-202F6 in linkage group 14,
             complete sequence
          Length = 130789

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   ttaaatacatcattacttca 158
             ||||||||||||||||||||
Sbjct: 86217 ttaaatacatcattacttca 86198
to top
>emb|BX324195.8| Zebrafish DNA sequence from clone CH211-288O15 in linkage group 14,
             complete sequence
          Length = 156128

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   ttaaatacatcattacttca 158
             ||||||||||||||||||||
Sbjct: 93414 ttaaatacatcattacttca 93433
to top
>gb|AY669537.1| Cortinarius aleuriosmus voucher TUB 011840 18S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 1, 5.8S
           ribosomal RNA gene, and internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 1328

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 213 aatgagaaagttgtccaagc 232
           ||||||||||||||||||||
Sbjct: 651 aatgagaaagttgtccaagc 632
to top
>dbj|AP008931.1| Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence
          Length = 271577

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 363   cgtcggggacgagggcgaat 382
             ||||||||||||||||||||
Sbjct: 95952 cgtcggggacgagggcgaat 95971
to top
>gb|AY028080.1| Mus musculus pericentriolar material gene 1 protein (Pcm1) gene,
             partial cds; and acid ceramidase (Asah1) and FSHD Region
             Gene 1 protein (Frg1) genes, complete cds
          Length = 183135

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 553   aaatattcttgttttctgtc 572
             ||||||||||||||||||||
Sbjct: 89290 aaatattcttgttttctgtc 89309
to top
>gb|AY096105.1|AY096105S1 Vibrio vulnificus super-integron, partial sequence
          Length = 1866

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 390 aaggtgagacccagacttta 409
           ||||||||||||||||||||
Sbjct: 487 aaggtgagacccagacttta 468
to top
>emb|BX511010.5| Zebrafish DNA sequence from clone CH211-79L20 in linkage group 16,
             complete sequence
          Length = 156317

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    cttgattaatccttttaaaa 109
             ||||||||||||||||||||
Sbjct: 35516 cttgattaatccttttaaaa 35497
to top
>dbj|AB013395.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQN23
          Length = 86064

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    taccttgattaatcctttta 106
             ||||||||||||||||||||
Sbjct: 48793 taccttgattaatcctttta 48812
to top
>emb|BX248238.5| Zebrafish DNA sequence from clone CH211-169J21 in linkage group 20,
              complete sequence
          Length = 158302

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 549    gagaaaatattcttgttttc 568
              ||||||||||||||||||||
Sbjct: 136391 gagaaaatattcttgttttc 136410
to top
>emb|BX000467.10| Zebrafish DNA sequence from clone CH211-1K7 in linkage group 19,
             complete sequence
          Length = 120440

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   ttaaatacatcattacttca 158
             ||||||||||||||||||||
Sbjct: 66923 ttaaatacatcattacttca 66904


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,549,690
Number of Sequences: 3902068
Number of extensions: 5549690
Number of successful extensions: 105290
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105046
Number of HSP's gapped (non-prelim): 239
length of query: 640
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 617
effective length of database: 17,143,297,704
effective search space: 10577414683368
effective search space used: 10577414683368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top