ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags7l04 |
|---|---|
| Clone Library Name | barley_pub |
>RL3_ORYSA (P35684) 60S ribosomal protein L3| Length = 388 Score = 367 bits (943), Expect = e-101 Identities = 175/184 (95%), Positives = 180/184 (97%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 E+P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS Sbjct: 204 EIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 263 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKAD 306 YTVARAGQNGYHHRTEMNKKVYKIGK GQE+H A TEFDRTEKDITPMGGFPHYGVVK D Sbjct: 264 YTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACTEFDRTEKDITPMGGFPHYGVVKGD 323 Query: 305 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFY 126 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF+DTSSKFGHGRFQTTDEKQRF+ Sbjct: 324 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFF 383 Query: 125 GKLK 114 GKLK Sbjct: 384 GKLK 387
>RL3B_ARATH (P22738) 60S ribosomal protein L3| Length = 389 Score = 347 bits (889), Expect = 2e-95 Identities = 160/182 (87%), Positives = 174/182 (95%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 +VP+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS Sbjct: 204 QVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 263 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKAD 306 YTVARAGQNGYHHRTEMNKKVY++GKVGQETH A TE+DRTEKDITPMGGFPHYG+VK D Sbjct: 264 YTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMTEYDRTEKDITPMGGFPHYGIVKED 323 Query: 305 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFY 126 YLMIKGCCVGPKKRVVTLRQ+LLKQTSRLA+EEIKLKF+D +S GHGRFQT+ EK +FY Sbjct: 324 YLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKLKFIDAASNGGHGRFQTSQEKAKFY 383 Query: 125 GK 120 G+ Sbjct: 384 GR 385
>RL3A_ARATH (P17094) 60S ribosomal protein L3| Length = 388 Score = 340 bits (872), Expect = 2e-93 Identities = 158/183 (86%), Positives = 173/183 (94%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 ++PI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS Sbjct: 204 QIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 263 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKAD 306 YTVARAGQNGYHHRTE+NKK+Y++GKVG E H A TE+DRTEKD+TPMGGFPHYG+VK D Sbjct: 264 YTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMTEYDRTEKDVTPMGGFPHYGIVKDD 323 Query: 305 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFY 126 YLMIKGCCVGPKKRVVTLRQSLL QTSRLALEEIKLKF+DT+S FGHGRFQT+ EK RFY Sbjct: 324 YLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKLKFIDTASIFGHGRFQTSLEKMRFY 383 Query: 125 GKL 117 ++ Sbjct: 384 NRV 386
>RL3_TOXCA (P49149) 60S ribosomal protein L3| Length = 401 Score = 268 bits (684), Expect = 1e-71 Identities = 122/187 (65%), Positives = 153/187 (81%), Gaps = 3/187 (1%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 +VP+D+VF +DEMID IGVTKGKG++GV +RW +LPRKTH+GLRKVACIGAWHP+RV Sbjct: 203 QVPVDSVFAQDEMIDCIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQ 262 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIGK---VGQETHDASTEFDRTEKDITPMGGFPHYGVV 315 +TVARAGQ GYHHRTE+NKK+Y++GK + + T++D TEK + PMGGFPHYG+V Sbjct: 263 FTVARAGQKGYHHRTEVNKKIYRLGKSCLTEEGKKNGGTDYDITEKSVNPMGGFPHYGLV 322 Query: 314 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQ 135 D++MI+GCCVG KKR +TLR+SL+ QT R A E+I LK++DTSSKFGHGRFQT EK+ Sbjct: 323 NQDFVMIRGCCVGSKKRPITLRKSLIVQTKRFAHEKINLKWIDTSSKFGHGRFQTHAEKR 382 Query: 134 RFYGKLK 114 F GKLK Sbjct: 383 AFMGKLK 389
>RL3_DROME (O16797) 60S ribosomal protein L3| Length = 415 Score = 266 bits (679), Expect = 5e-71 Identities = 127/190 (66%), Positives = 151/190 (79%), Gaps = 7/190 (3%) Frame = -3 Query: 662 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSY 483 + + VF +DEMID +GVTKGKG++GV +RW +LPRKTH+GLRKVACIGAWHP+RVS Sbjct: 204 IQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVST 263 Query: 482 TVARAGQNGYHHRTEMNKKVYKIGKVGQETHD-------ASTEFDRTEKDITPMGGFPHY 324 TVARAGQ GYHHRTE+NKK+Y+IG G T D ASTE+D T+K ITPMGGFPHY Sbjct: 264 TVARAGQKGYHHRTEINKKIYRIG-AGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHY 322 Query: 323 GVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTD 144 G V D++MIKGCC+G KKR++TLR+SLLK T R ALE+IKLKF+DTSSK GHGRFQT Sbjct: 323 GEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPA 382 Query: 143 EKQRFYGKLK 114 +K F G LK Sbjct: 383 DKLAFMGPLK 392
>RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)| Length = 402 Score = 265 bits (676), Expect = 1e-70 Identities = 127/190 (66%), Positives = 157/190 (82%), Gaps = 6/190 (3%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 +VP++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+ Sbjct: 203 QVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVA 262 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHY 324 +TVARAGQ GYHHRTE+NKK+YKIG K G+ ++AST++D ++K I P+GGF HY Sbjct: 263 FTVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHY 322 Query: 323 GVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTD 144 G V D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT + Sbjct: 323 GEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTME 382 Query: 143 EKQRFYGKLK 114 EK+ F G LK Sbjct: 383 EKKAFMGPLK 392
>RL3_RAT (P21531) 60S ribosomal protein L3 (L4)| Length = 402 Score = 263 bits (672), Expect = 3e-70 Identities = 126/190 (66%), Positives = 157/190 (82%), Gaps = 6/190 (3%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 +VP++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+ Sbjct: 203 QVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVA 262 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHY 324 ++VARAGQ GYHHRTE+NKK+YKIG K G+ ++AST++D ++K I P+GGF HY Sbjct: 263 FSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHY 322 Query: 323 GVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTD 144 G V D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT + Sbjct: 323 GEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTME 382 Query: 143 EKQRFYGKLK 114 EK+ F G LK Sbjct: 383 EKKAFMGPLK 392
>RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein B)| (TARBP-B) Length = 402 Score = 263 bits (671), Expect = 5e-70 Identities = 126/190 (66%), Positives = 157/190 (82%), Gaps = 6/190 (3%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 +VP++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+ Sbjct: 203 QVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVA 262 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHY 324 ++VARAGQ GYHHRTE+NKK+YKIG K G+ ++AST++D ++K I P+GGF HY Sbjct: 263 FSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHY 322 Query: 323 GVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTD 144 G V D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT + Sbjct: 323 GEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTME 382 Query: 143 EKQRFYGKLK 114 EK+ F G LK Sbjct: 383 EKKAFMGPLK 392
>RL3_BOVIN (P39872) 60S ribosomal protein L3| Length = 402 Score = 263 bits (671), Expect = 5e-70 Identities = 126/190 (66%), Positives = 156/190 (82%), Gaps = 6/190 (3%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 +VP+ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+ Sbjct: 203 QVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVA 262 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHY 324 ++VARAGQ GYHHRTE+NKK+YKIG K G+ ++AST++D ++K I P+GGF HY Sbjct: 263 FSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHY 322 Query: 323 GVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTD 144 G V D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT + Sbjct: 323 GEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTVE 382 Query: 143 EKQRFYGKLK 114 EK+ F G LK Sbjct: 383 EKKAFMGPLK 392
>RL3_ASHGO (Q759R7) 60S ribosomal protein L3| Length = 388 Score = 258 bits (658), Expect = 1e-68 Identities = 124/183 (67%), Positives = 147/183 (80%) Frame = -3 Query: 662 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSY 483 V +D+VF+++EMID+I VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V + Sbjct: 204 VSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMW 263 Query: 482 TVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 303 TVARAGQNGYHHRT +N KVY+IGK G E +A+TEFDRT+K ITPMGGF HYG V D+ Sbjct: 264 TVARAGQNGYHHRTSINHKVYRIGKGGDE-GNAATEFDRTKKTITPMGGFVHYGAVNNDF 322 Query: 302 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYG 123 +M+KG G +KRVVTLR+SL TSR ALEE+ LK++DT+SKFG GRFQT EK F G Sbjct: 323 VMVKGSIPGTRKRVVTLRKSLYTSTSRRALEEVNLKWIDTASKFGKGRFQTPAEKHAFMG 382 Query: 122 KLK 114 LK Sbjct: 383 TLK 385
>RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3| Length = 402 Score = 257 bits (657), Expect = 2e-68 Identities = 125/190 (65%), Positives = 156/190 (82%), Gaps = 6/190 (3%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 +VP++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGA HPARV+ Sbjct: 203 QVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGARHPARVA 262 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHY 324 ++VARAGQ GYHHRTE+NKK+YKIG K G+ ++AST++D ++K I P+GGF HY Sbjct: 263 FSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHY 322 Query: 323 GVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTD 144 G V D++M+KGC VG KKRV+TLR+SLL QT R ALE+I LKF+DT+SKFGHGRFQT + Sbjct: 323 GEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTME 382 Query: 143 EKQRFYGKLK 114 EK+ F G LK Sbjct: 383 EKKAFMGPLK 392
>RL3_CAEEL (P50880) 60S ribosomal protein L3| Length = 401 Score = 256 bits (654), Expect = 4e-68 Identities = 118/187 (63%), Positives = 152/187 (81%), Gaps = 3/187 (1%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 +V +D VF +DEMID IGVT+G G++GV +RW +LPRKTH+GLRKVACIGAWHP+RV+ Sbjct: 204 QVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVA 263 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIGK---VGQETHDASTEFDRTEKDITPMGGFPHYGVV 315 +TVARAGQ G+HHRT +N K+Y+IGK + ++ STEFD T+K ITPMGGFP YG+V Sbjct: 264 FTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPRYGIV 323 Query: 314 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQ 135 DY+M++G +GPKKR++TLR+SL+ QT R+A E+I LK++DTSSK GHGRFQTT EK+ Sbjct: 324 NQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKR 383 Query: 134 RFYGKLK 114 F GKLK Sbjct: 384 AFMGKLK 390
>RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3| Length = 401 Score = 254 bits (649), Expect = 2e-67 Identities = 117/187 (62%), Positives = 151/187 (80%), Gaps = 3/187 (1%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 ++ +D VF +DEMID IGVTKG G++GV +RW +LPRKTH+GLRKVACIGAWHP+RV+ Sbjct: 204 QIQVDTVFSQDEMIDTIGVTKGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVA 263 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIGK---VGQETHDASTEFDRTEKDITPMGGFPHYGVV 315 +TVARAGQ G+HHRT +N K+Y+IGK + ++ STEFD T+K I PMGGFP YG+V Sbjct: 264 FTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTINPMGGFPRYGLV 323 Query: 314 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQ 135 DY+M++G +GPKKR++TLR+SL+ QT R+A E+I LK++DTSSK GHGRFQTT EK+ Sbjct: 324 NQDYVMLRGAILGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKR 383 Query: 134 RFYGKLK 114 F GKLK Sbjct: 384 AFMGKLK 390
>RL3_DICDI (P34113) 60S ribosomal protein L3| Length = 397 Score = 251 bits (641), Expect = 1e-66 Identities = 116/187 (62%), Positives = 146/187 (78%), Gaps = 4/187 (2%) Frame = -3 Query: 662 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSY 483 V + VF ++E+ID+IGVTKGKG+ GV+ RWGV +LPRKTH+GLRKVACIGAWHP+RVS Sbjct: 205 VNVTGVFAENELIDVIGVTKGKGFNGVIKRWGVRKLPRKTHKGLRKVACIGAWHPSRVST 264 Query: 482 TVARAGQNGYHHRTEMNKKVYKIGKV----GQETHDASTEFDRTEKDITPMGGFPHYGVV 315 TV RAGQ GYHHR E NKK+Y+IG+ G++ TEFD TEK I PMGGF HYG+V Sbjct: 265 TVPRAGQLGYHHRVERNKKIYRIGQAQPEDGKQISTGKTEFDLTEKTINPMGGFAHYGMV 324 Query: 314 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQ 135 K ++LM+KGC GP+KR +TLR+S+ QT R ALE+I LKF+DTSSKFGHG QT ++K Sbjct: 325 KHEFLMLKGCVAGPRKRALTLRKSITTQTGRAALEKITLKFIDTSSKFGHGLHQTAEDKT 384 Query: 134 RFYGKLK 114 +++G K Sbjct: 385 KYFGVKK 391
>RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)| Length = 392 Score = 250 bits (639), Expect = 2e-66 Identities = 117/183 (63%), Positives = 148/183 (80%) Frame = -3 Query: 662 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSY 483 + ID++F+KDEMID+I VTKG G++GV +RWG +LPRKTH+GLRKVACIGAWHP+ V + Sbjct: 204 IEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQW 263 Query: 482 TVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 303 TVARAGQ GYHHRT N KV++IGK G + +AST+FD ++K ITPMGGF YG VK DY Sbjct: 264 TVARAGQMGYHHRTSCNHKVFRIGK-GSDEGNASTDFDISKKQITPMGGFVRYGEVKNDY 322 Query: 302 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYG 123 +M+KG G KKRV+TLR++L QTSR A E+++LK++DTSSKFGHG FQT +EK+ F G Sbjct: 323 IMVKGSVPGVKKRVMTLRKTLYPQTSRRATEKVELKWIDTSSKFGHGAFQTPEEKRAFMG 382 Query: 122 KLK 114 LK Sbjct: 383 TLK 385
>RL3_KLULA (Q6CJR7) 60S ribosomal protein L3| Length = 387 Score = 250 bits (638), Expect = 3e-66 Identities = 117/183 (63%), Positives = 146/183 (79%) Frame = -3 Query: 662 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSY 483 V +D+VF+++EMID++ VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V + Sbjct: 203 VAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMW 262 Query: 482 TVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 303 +VARAGQ GYHHRT +N KVY++GK G + +A+TEFDRT+K ITPMGGF HYG + D+ Sbjct: 263 SVARAGQRGYHHRTSINHKVYRVGK-GDDEANAATEFDRTKKTITPMGGFVHYGAINNDF 321 Query: 302 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYG 123 +++KG G +KRVVTLR+SL TSR ALEE+ LK++DT+SKFG GRFQT EK F G Sbjct: 322 VILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTLKWIDTASKFGKGRFQTPAEKHAFLG 381 Query: 122 KLK 114 LK Sbjct: 382 TLK 384
>RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like| Length = 406 Score = 249 bits (637), Expect = 4e-66 Identities = 118/191 (61%), Positives = 148/191 (77%), Gaps = 7/191 (3%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 +VP+ +VF ++E+ID+I VTKG+G +GV +RW +LPRKTH+GLRKVACIGAWHPARV Sbjct: 203 QVPVHSVFSQNEIIDVIAVTKGRGIKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVG 262 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIGKVGQETHD-------ASTEFDRTEKDITPMGGFPH 327 ++ARAGQ GYHHRTE+NKK+Y+IG+ G D AST +D T+K ITP+GGFPH Sbjct: 263 CSIARAGQKGYHHRTELNKKIYRIGR-GLHMEDGKVVKNNASTSYDVTDKSITPLGGFPH 321 Query: 326 YGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTT 147 YG V D++M+KGC G KKRV+TLR+SLL SR ALE I+LKF+DT+SKFGHGRFQT Sbjct: 322 YGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQALENIELKFIDTTSKFGHGRFQTA 381 Query: 146 DEKQRFYGKLK 114 EK+ F G K Sbjct: 382 QEKRAFMGPQK 392
>RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Maintenance of| killer protein 8) (Trichodermin resistance protein) Length = 386 Score = 248 bits (634), Expect = 9e-66 Identities = 116/183 (63%), Positives = 144/183 (78%) Frame = -3 Query: 662 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSY 483 V +D+VF+++EMID I VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V + Sbjct: 202 VAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMW 261 Query: 482 TVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 303 +VARAGQ GYH RT +N K+Y++GK G + + +T FDRT+K ITPMGGF HYG +K D+ Sbjct: 262 SVARAGQRGYHSRTSINHKIYRVGK-GDDEANGATSFDRTKKTITPMGGFVHYGEIKNDF 320 Query: 302 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYG 123 +M+KGC G +KR+VTLR+SL TSR ALEE+ LK++DT+SKFG GRFQT EK F G Sbjct: 321 IMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWIDTASKFGKGRFQTPAEKHAFMG 380 Query: 122 KLK 114 LK Sbjct: 381 TLK 383
>RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3| Length = 387 Score = 247 bits (630), Expect = 3e-65 Identities = 118/183 (64%), Positives = 144/183 (78%) Frame = -3 Query: 662 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSY 483 V +D+VF+++EMID I VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V + Sbjct: 203 VSVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMW 262 Query: 482 TVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 303 +VARAGQ GYHHRT +N K+Y+IGK G + +A+T FDRT+K I PMGGF HYG+V D+ Sbjct: 263 SVARAGQRGYHHRTSINHKIYRIGK-GDDEGNAATNFDRTKKTINPMGGFVHYGMVNNDF 321 Query: 302 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYG 123 +M+KG G KKRVVTLR+SL TSR A+EE+ LK++DT+SKFG GRFQT EK F G Sbjct: 322 VMVKGSIPGCKKRVVTLRKSLYTNTSRKAVEEVTLKWIDTASKFGKGRFQTPAEKHAFMG 381 Query: 122 KLK 114 LK Sbjct: 382 TLK 384
>RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3| Length = 389 Score = 246 bits (628), Expect = 4e-65 Identities = 116/183 (63%), Positives = 141/183 (77%) Frame = -3 Query: 662 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSY 483 V +D+VF+KDEM+D+ VTKG G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V + Sbjct: 203 VSVDSVFEKDEMVDVAAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPANVQW 262 Query: 482 TVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 303 TVARAGQNG+HHRT +N KVY++G G E+ A TEFDRT+K I PMGGF YG VK D+ Sbjct: 263 TVARAGQNGFHHRTSINHKVYRVGSAGDESSGA-TEFDRTKKTINPMGGFVRYGNVKNDF 321 Query: 302 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYG 123 +++KG G KKR+VT+R+SL TSR A E + LK++DT+SKFG GRFQT EK F G Sbjct: 322 MLLKGSIPGVKKRIVTIRKSLYVDTSRRATENVNLKWIDTASKFGKGRFQTPAEKHAFLG 381 Query: 122 KLK 114 LK Sbjct: 382 TLK 384
>RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like| Length = 406 Score = 246 bits (627), Expect = 6e-65 Identities = 116/191 (60%), Positives = 146/191 (76%), Gaps = 7/191 (3%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 +VP+ +VF + E+ID+I VTKG+G +GV +RW +LPRKTH+GLRKVACIGAWHPARV Sbjct: 203 QVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVG 262 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIGKVGQETHD-------ASTEFDRTEKDITPMGGFPH 327 ++ARAGQ GYHHRTE+NKK+++IG+ G D AST +D T K ITP+GGFPH Sbjct: 263 CSIARAGQKGYHHRTELNKKIFRIGR-GPHMEDGKLVKNNASTSYDVTAKSITPLGGFPH 321 Query: 326 YGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTT 147 YG V D++M+KGC G KKRV+TLR+SLL SR A+E I+LKF+DT+SKFGHGRFQT Sbjct: 322 YGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFGHGRFQTA 381 Query: 146 DEKQRFYGKLK 114 EK+ F G K Sbjct: 382 QEKRAFMGPQK 392
>RL3B_SCHPO (P36584) 60S ribosomal protein L3-B| Length = 387 Score = 245 bits (625), Expect = 1e-64 Identities = 117/183 (63%), Positives = 143/183 (78%) Frame = -3 Query: 662 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSY 483 V I + F+++EMID+IGVT+GKG EG RWG RLPRKTHRGLRKVACIGAWHPA V + Sbjct: 202 VDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLPRKTHRGLRKVACIGAWHPANVQW 261 Query: 482 TVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 303 TVARAG GY HRT++N K+Y+IG G + +AST+FD TEK ITPMGGF YGVV+ D+ Sbjct: 262 TVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTDFDATEKRITPMGGFVRYGVVENDF 320 Query: 302 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYG 123 +M+ G GP KRV+TLR+SLL TSR ALE + LK++DT+SKFGHGRFQT E ++F G Sbjct: 321 VMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAKQFLG 380 Query: 122 KLK 114 LK Sbjct: 381 TLK 383
>RL3A_SCHPO (P40372) 60S ribosomal protein L3-A| Length = 387 Score = 245 bits (625), Expect = 1e-64 Identities = 117/183 (63%), Positives = 143/183 (78%) Frame = -3 Query: 662 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSY 483 V I + F+++EMID+IGVT+GKG EG RWG RLPRKTHRGLRKVACIGAWHPA V + Sbjct: 202 VDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLPRKTHRGLRKVACIGAWHPANVQW 261 Query: 482 TVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 303 TVARAG GY HRT++N K+Y+IG G + +AST+FD TEK ITPMGGF YGVV+ D+ Sbjct: 262 TVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNASTDFDATEKRITPMGGFVRYGVVENDF 320 Query: 302 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYG 123 +M+ G GP KRV+TLR+SLL TSR ALE + LK++DT+SKFGHGRFQT E ++F G Sbjct: 321 VMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAKQFLG 380 Query: 122 KLK 114 LK Sbjct: 381 TLK 383
>RL3_NEUCR (P59671) 60S ribosomal protein L3| Length = 392 Score = 241 bits (614), Expect = 2e-63 Identities = 113/183 (61%), Positives = 143/183 (78%) Frame = -3 Query: 662 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSY 483 V ID++F+KDE+ID+I VTKG G+ GV RWG +LPRKTH+GLRKVACIGAWHP+ V + Sbjct: 204 VSIDSIFEKDEVIDVIAVTKGHGFTGVTARWGTKKLPRKTHKGLRKVACIGAWHPSHVQW 263 Query: 482 TVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 303 TVARAGQ GYHHRT +N K+Y+IGK G A+TE D T+K ITPMGGF YG + D+ Sbjct: 264 TVARAGQAGYHHRTSVNHKIYRIGK-GDAEDSAATEVDVTKKKITPMGGFVRYGEINNDF 322 Query: 302 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFYG 123 +M+KG G KKRV+TLR+S+ TSR ALE+++LK++DTSS+FGHG FQT EK++F G Sbjct: 323 VMVKGSVPGVKKRVMTLRKSMFVHTSRKALEKVELKWIDTSSEFGHGAFQTPAEKKQFQG 382 Query: 122 KLK 114 LK Sbjct: 383 TLK 385
>RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3| Length = 383 Score = 228 bits (581), Expect = 1e-59 Identities = 113/184 (61%), Positives = 141/184 (76%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 E+ I VF +E ID IGVTKGKG++G V R+GV + PRK+ +G+RKVACIGAWHP+RV Sbjct: 198 EIAIGEVFGVNENIDTIGVTKGKGFQGTVKRFGVRKQPRKSRKGIRKVACIGAWHPSRVM 257 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKAD 306 Y++ARAGQ G+H RTE NK+VY I G + + TEFD TEK I+PMGGFPHYG V+ D Sbjct: 258 YSIARAGQMGFHRRTEKNKRVYMI---GNGSSNIKTEFDLTEKPISPMGGFPHYGEVRND 314 Query: 305 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTDEKQRFY 126 ++M+KG VG +KRVVTLR+SLL+Q A EE+ +KFVDTSSK GHGRFQT+ EK+ FY Sbjct: 315 FIMVKGAVVGARKRVVTLRKSLLRQR---AGEELVIKFVDTSSKIGHGRFQTSAEKKAFY 371 Query: 125 GKLK 114 G K Sbjct: 372 GARK 375
>RL3_PIG (Q29293) 60S ribosomal protein L3 (Fragment)| Length = 130 Score = 169 bits (429), Expect = 5e-42 Identities = 79/129 (61%), Positives = 102/129 (79%), Gaps = 6/129 (4%) Frame = -3 Query: 662 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSY 483 VP++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPAR ++ Sbjct: 2 VPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARXAF 61 Query: 482 TVARAGQNGYHHRTEMNKKVYKIG-----KVGQ-ETHDASTEFDRTEKDITPMGGFPHYG 321 +VARAGQ GYHHRTE+NKK+YKIG K G+ ++ T++D ++K I P+G F HYG Sbjct: 62 SVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNXXTDYDLSDKSINPLGRFVHYG 121 Query: 320 VVKADYLMI 294 V D++M+ Sbjct: 122 EVTNDFVML 130
>RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P| Length = 365 Score = 147 bits (372), Expect = 2e-35 Identities = 70/164 (42%), Positives = 105/164 (64%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 E+ + V ++ E++D+I VTKGKG +G V RWG+ K +G RKV IG WHPARV Sbjct: 206 ELRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVM 265 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKAD 306 +TV AGQ G+HHRTE+NK++ IG+ G+ D +TE +ITP GGFPHYG+V++D Sbjct: 266 WTVPMAGQMGFHHRTELNKRLIAIGENGKLKLDENTEI-----EITPKGGFPHYGIVRSD 320 Query: 305 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 174 ++MI G G KR++ +R ++ + ++ ++ +V SK Sbjct: 321 FMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 364
>RL3_PYRHO (O59418) 50S ribosomal protein L3P| Length = 362 Score = 145 bits (366), Expect = 1e-34 Identities = 69/164 (42%), Positives = 102/164 (62%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 E+ + V ++ E++D+I VTKGKG +G V RWG+ K +G RKV IG WHPARV Sbjct: 204 EIRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVM 263 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKAD 306 +TV AGQ G+HHRTE+NK++ IG+ G+ D E +ITP GGFPHYG+V+ D Sbjct: 264 WTVPMAGQMGFHHRTELNKRLIAIGENGK------LVIDGNEIEITPKGGFPHYGIVRGD 317 Query: 305 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 174 ++MI G G KR++ +R ++ + ++ ++ +V SK Sbjct: 318 FMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 361
>RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P| Length = 361 Score = 145 bits (365), Expect = 1e-34 Identities = 69/164 (42%), Positives = 103/164 (62%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 E+ + V ++ E++D+I VTKGKG +G V RWG+ K +G RKV IG WHPARV Sbjct: 203 ELRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVM 262 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKAD 306 +TV AGQ G+HHRTE+NK++ IG+ G+ D E +ITP GGFPHYG+V++D Sbjct: 263 WTVPMAGQMGFHHRTELNKRLIAIGENGK------LVIDGNEIEITPKGGFPHYGIVRSD 316 Query: 305 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 174 ++MI G G KR++ +R ++ + ++ ++ +V SK Sbjct: 317 FMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 360
>RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P| Length = 346 Score = 134 bits (336), Expect = 3e-31 Identities = 69/166 (41%), Positives = 101/166 (60%), Gaps = 2/166 (1%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPAR 492 E+ V + E++D+I VTKGKG +G V RWGV K R R + +G WHPAR Sbjct: 186 ELRAGEVLHEGELLDVIAVTKGKGTQGPVKRWGVKVQFHKAQRAGKGRHIGNLGPWHPAR 245 Query: 491 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 312 V +TV +AGQ G+HHRTE NK++ IG+ G+ D + E +ITP GGFPHYG+V+ Sbjct: 246 VMWTVPQAGQMGFHHRTEFNKRLIAIGENGKLVLDGN------EIEITPKGGFPHYGIVR 299 Query: 311 ADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSK 174 +D+LMI+G G KR++ +R ++ + +E ++ +V SK Sbjct: 300 SDFLMIEGTIPGSFKRIIRVRPAIRPPKKKPPVERPQITYVSRESK 345
>RL3_METJA (P54014) 50S ribosomal protein L3P| Length = 335 Score = 129 bits (325), Expect = 6e-30 Identities = 70/168 (41%), Positives = 101/168 (60%), Gaps = 2/168 (1%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT-RLPRKTHRGL-RKVACIGAWHPAR 492 ++ I VFQ+ E++D IGVTKGKG++G V RWGV + + +G+ R V IG W P Sbjct: 183 QLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQPKM 242 Query: 491 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 312 V ++V GQ GYH RTE NK++ KIG G E ITP GGF HYGV++ Sbjct: 243 VMWSVPMPGQMGYHQRTEYNKRILKIGNNGDE--------------ITPKGGFLHYGVIR 288 Query: 311 ADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 168 +Y+++KG GP KR++ LR+++ Q + + EI ++ T+SK G Sbjct: 289 NNYVVLKGSVQGPAKRLIVLRRAIRPQEPLIKVPEI--TYISTTSKQG 334
>RL3_ARCFU (O28354) 50S ribosomal protein L3P| Length = 331 Score = 128 bits (321), Expect = 2e-29 Identities = 66/168 (39%), Positives = 100/168 (59%), Gaps = 2/168 (1%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPAR 492 E+ + VF + +ID+I VTKGKG++G V RWGV L K R R+V +G W+P Sbjct: 179 EISVSEVFDEGAIIDVIAVTKGKGFQGPVKRWGVITLDAKHARSSKHRRVGNLGPWNPHH 238 Query: 491 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 312 V +TV +AGQ G+H RTE NK++ KIG+ G+E ITP GGF HYGV++ Sbjct: 239 VRWTVPQAGQMGFHQRTEYNKRLIKIGENGEE--------------ITPKGGFLHYGVIR 284 Query: 311 ADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 168 Y+++ G GP KR++ +R ++ + + + + + +V T+SK G Sbjct: 285 TQYVLVTGSVPGPVKRLIRMRDAI--RPPKAHFDGVNIVYVSTTSKQG 330
>RL3_METKA (Q8TY90) 50S ribosomal protein L3P| Length = 361 Score = 127 bits (318), Expect = 4e-29 Identities = 66/144 (45%), Positives = 90/144 (62%), Gaps = 2/144 (1%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPAR 492 E+ VF + E++D+ +TKGKG++GVV RWGVT RKT R R + IG P+R Sbjct: 189 EIRAKDVFDEGEIVDVSAITKGKGFQGVVKRWGVTIQDRKTQRKQKGRHIGSIGPITPSR 248 Query: 491 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 312 V +TV AGQ GYH RTE NK++ KIG+ G+E +TP GGF +YGVV+ Sbjct: 249 VRWTVPMAGQVGYHQRTEHNKRILKIGEDGEE--------------VTPRGGFVNYGVVR 294 Query: 311 ADYLMIKGCCVGPKKRVVTLRQSL 240 DY+MI G GPKKR++ +R ++ Sbjct: 295 GDYIMIHGTVPGPKKRLIRVRPAV 318
>RL3_METVA (Q9UWG2) 50S ribosomal protein L3P| Length = 334 Score = 120 bits (300), Expect = 5e-27 Identities = 67/166 (40%), Positives = 94/166 (56%), Gaps = 2/166 (1%) Frame = -3 Query: 656 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT-RLPRKTHRGL-RKVACIGAWHPARVSY 483 I+ VF+ E ID + VTKGKG++G V RWGV + + +G+ R+ IG W P RV + Sbjct: 185 INDVFETGEFIDTLAVTKGKGFQGPVKRWGVKIQFGKHQRKGVGRQTGSIGPWRPKRVMW 244 Query: 482 TVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADY 303 TV AGQ G+H RTE NK++ K+G G E ITP GGF +YG VK Y Sbjct: 245 TVPLAGQMGFHQRTEYNKRILKLGSEGAE--------------ITPKGGFLNYGAVKNGY 290 Query: 302 LMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGH 165 +++KG GP KR+V LR ++ + L E+ ++ SK G+ Sbjct: 291 VVVKGTVQGPAKRLVVLRGAVRPAEDKFGLPEV--TYISKESKQGN 334
>RL3_METAC (Q8TRU7) 50S ribosomal protein L3P| Length = 337 Score = 119 bits (298), Expect = 8e-27 Identities = 64/167 (38%), Positives = 96/167 (57%), Gaps = 2/167 (1%) Frame = -3 Query: 662 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWHPARV 489 V + VF+ ++D +T GKG +G V RWG+ + K R LR+V +GA++P+RV Sbjct: 187 VSVTDVFKNGTLVDTAAITIGKGTQGPVKRWGIQLMKGKHSRQGSLRQVGTLGAFNPSRV 246 Query: 488 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKA 309 S+ V + GQ GYH RTE NK++ KIG G+E +TP GGF +YG+V+ Sbjct: 247 SWRVPQMGQMGYHQRTEFNKRILKIGSDGEE--------------VTPEGGFINYGLVRG 292 Query: 308 DYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 168 DY++IKG GP KR++ LR + + + L E + ++ SK G Sbjct: 293 DYILIKGSVPGPSKRLIRLRDPI--RAKKADLGEPNILYISRESKQG 337
>RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P| Length = 338 Score = 119 bits (297), Expect = 1e-26 Identities = 65/135 (48%), Positives = 84/135 (62%), Gaps = 2/135 (1%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSYTVA 474 VF +++D+I VTKGKGY+GV+ R+GVT LPR K +G R+ IG PA V +T Sbjct: 194 VFTPGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGPQAPA-VMFTQP 252 Query: 473 RAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 294 R GQ G+H RTE NK++ KIG+ G E ITP GFPHYGVVK Y++I Sbjct: 253 RPGQMGFHQRTEYNKRLLKIGENGAE--------------ITPKSGFPHYGVVKGPYILI 298 Query: 293 KGCCVGPKKRVVTLR 249 +G G +KR+V LR Sbjct: 299 QGSVPGARKRLVVLR 313
>RL3_METTH (O26110) 50S ribosomal protein L3P| Length = 337 Score = 117 bits (294), Expect = 2e-26 Identities = 66/169 (39%), Positives = 96/169 (56%), Gaps = 3/169 (1%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPAR 492 +V +F + +D I VTKGKG++G V RWG+ K R R + +G W P+R Sbjct: 183 DVRASEIFSEGAFVDAIAVTKGKGFQGPVKRWGIRIQYGKAARSSKGRHIGSLGPWTPSR 242 Query: 491 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKD-ITPMGGFPHYGVV 315 +TV +AGQ GYH RTE NK++ KIG D +E D + P GGF YG+V Sbjct: 243 TMWTVPQAGQMGYHRRTEYNKQILKIG-------------DASEADLVNPDGGFVRYGLV 289 Query: 314 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 168 + DY+MIKG GP KR+V LR+++ + + E ++ ++ T+SK G Sbjct: 290 RNDYVMIKGSVPGPTKRLVVLRKAI--RAAGKQEEAPQINYISTASKQG 336
>RL3_METMA (Q8PV50) 50S ribosomal protein L3P| Length = 337 Score = 115 bits (287), Expect = 2e-25 Identities = 62/167 (37%), Positives = 95/167 (56%), Gaps = 2/167 (1%) Frame = -3 Query: 662 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWHPARV 489 V + VF+ ++D +T GKG +G V RWG+ K R LR++ +G+++P+RV Sbjct: 187 VNVTDVFKNGTVVDTAAITIGKGTQGPVKRWGIQLQKGKHSRQGSLRQIGTLGSFNPSRV 246 Query: 488 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKA 309 S+ V + GQ GYH RTE NK++ KIG G+E +TP GGF +YG+V+ Sbjct: 247 SWRVPQMGQMGYHQRTEFNKRILKIGSDGEE--------------VTPEGGFINYGLVRG 292 Query: 308 DYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 168 DY++IKG GP KR++ LR + + + L E + ++ SK G Sbjct: 293 DYVLIKGSVPGPSKRLIRLRDPI--RAKKADLGEPNILYISRESKQG 337
>RL3_THEVO (Q97BX7) 50S ribosomal protein L3P| Length = 331 Score = 107 bits (267), Expect = 3e-23 Identities = 60/155 (38%), Positives = 85/155 (54%) Frame = -3 Query: 632 EMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGY 453 + +D++ VTKGKG+ G V R+GV LPRK + R + +G WHP V TV +AGQ GY Sbjct: 190 KFVDVLSVTKGKGFTGHVQRFGVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGY 249 Query: 452 HHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGP 273 RT N +V K K DA T I GGF HYG+VK DY+++ G GP Sbjct: 250 QQRTISNVRVLKYSK----GEDADT--------INVRGGFLHYGLVKNDYVLLFGSVPGP 297 Query: 272 KKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 168 KR++ +R ++ ++ +KL ++ SK G Sbjct: 298 AKRLIKMRDPARQKVP--DIDNVKLDYISLESKQG 330
>RL3_THEAC (Q9HIQ9) 50S ribosomal protein L3P| Length = 331 Score = 105 bits (261), Expect = 2e-22 Identities = 58/155 (37%), Positives = 84/155 (54%) Frame = -3 Query: 632 EMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGY 453 + +D++ +TKGKG+ G V R+GV LPRK + R + +G WHP V TV +AGQ G+ Sbjct: 190 KFVDVVSITKGKGFTGHVKRFGVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGF 249 Query: 452 HHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGP 273 RT N +V K G E D I GGF HYG VK DY+++ G G Sbjct: 250 QQRTISNVRVIKYGN--------KEEVD----SINVRGGFLHYGFVKNDYVLLFGSIPGA 297 Query: 272 KKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 168 KR++ +R ++ +EE+KL+++ SK G Sbjct: 298 SKRLIKMRDPARQKVP--DIEEVKLEYISLESKQG 330
>RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P| Length = 334 Score = 104 bits (259), Expect = 3e-22 Identities = 62/162 (38%), Positives = 87/162 (53%), Gaps = 2/162 (1%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSYTVA 474 VF+ E D G+TKGKG +G V RWGV + K R R++ +G W+P+RV TV Sbjct: 190 VFRAGEFTDAAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVP 249 Query: 473 RAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 294 + GQ GYH RTE+NK++ I G E TP GGFP+YG V Y ++ Sbjct: 250 QQGQTGYHQRTELNKRLIDIND-GDEP--------------TPDGGFPNYGEVDGPYTLV 294 Query: 293 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 168 KG GP++R+V R ++ S E+ ++V T+S G Sbjct: 295 KGSVPGPEQRLVRFRPAVRPNESPRLDPEV--RYVSTASNQG 334
>RL3_NANEQ (P60458) 50S ribosomal protein L3P| Length = 321 Score = 104 bits (259), Expect = 3e-22 Identities = 56/155 (36%), Positives = 88/155 (56%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 E+ I+ VF++ + +D+I VTKGKG++GV+ R+ V R K+ +G+RKV IG+ P R+ Sbjct: 176 ELSINDVFKEGQYVDVIAVTKGKGFQGVIKRFHVHRRQHKSEKGVRKVGAIGSRGPGRIF 235 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKAD 306 TV GQ GYH RTE NK + KIG + + GG+ YG V Sbjct: 236 PTVPMPGQMGYHRRTEYNKLIIKIG-----------------EPLNVEGGWVRYGQVIGP 278 Query: 305 YLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 201 +++KG GP+KR++ LR+++ + +E I+ Sbjct: 279 TILLKGSVPGPRKRLIILREAIRPPRKQEKVEGIE 313
>RL3_SULTO (Q975I1) 50S ribosomal protein L3P| Length = 343 Score = 103 bits (257), Expect = 5e-22 Identities = 66/162 (40%), Positives = 93/162 (57%), Gaps = 2/162 (1%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSYTVA 474 VF++ ++IDIIGVTKGKG++GVV R+GV LPR K +G RKV G + SY V Sbjct: 200 VFKEGQLIDIIGVTKGKGFQGVVKRYGVVELPRWHKHRKGSRKVGARGPSF-STPSY-VP 257 Query: 473 RAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 294 + GQ GYH RTE NK++ KI +I P GGF +YG+V+ YL+I Sbjct: 258 QPGQMGYHRRTEYNKRILKISD--------------DPNEINPKGGFVNYGIVRNTYLII 303 Query: 293 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 168 +G +G KKR + LR + + S + K+ +V+ S+ G Sbjct: 304 EGSIIGAKKRPLFLRYPI--RPSWIPQSAPKITYVNLYSQQG 343
>RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)| Length = 337 Score = 102 bits (254), Expect = 1e-21 Identities = 56/144 (38%), Positives = 80/144 (55%), Gaps = 2/144 (1%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPAR 492 E ++ +F+ E D+ GVTKGKG +G V RWGV + K R R++ +G W+P+R Sbjct: 187 EHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSR 246 Query: 491 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 312 V TV + GQ GYH RTE+NK++ IG+ + T D GGF +YG V Sbjct: 247 VRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVD---------------GGFVNYGEVD 291 Query: 311 ADYLMIKGCCVGPKKRVVTLRQSL 240 Y ++KG GP KR+V R ++ Sbjct: 292 GPYTLVKGSVPGPDKRLVRFRPAV 315
>RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P| Length = 344 Score = 101 bits (251), Expect = 2e-21 Identities = 54/169 (31%), Positives = 94/169 (55%), Gaps = 4/169 (2%) Frame = -3 Query: 662 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARV 489 + ++ VF++ +++D+I VTKGKG++GV+ RWGV LPR K +G R++ H Sbjct: 191 IAVNDVFEEGQLVDVIAVTKGKGFQGVIKRWGVKELPRWHKHRKGSRRIGARS--HGRST 248 Query: 488 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKA 309 + +AGQ G+H RTE NK++ I G + +TP GGF YGVV++ Sbjct: 249 FWETPQAGQTGFHRRTEYNKRILMIDDDGYK--------------VTPAGGFLRYGVVRS 294 Query: 308 DYLMIKGCCVGPKKRVVTLRQSLL--KQTSRLALEEIKLKFVDTSSKFG 168 ++M+ G G KR + +R ++ + +L + + ++ ++ +SK G Sbjct: 295 TFVMLSGSIPGTPKRPIVMRWAIRPPEWYLKLGVRKPEITYISLASKQG 343
>RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P| Length = 351 Score = 101 bits (251), Expect = 2e-21 Identities = 57/142 (40%), Positives = 83/142 (58%), Gaps = 2/142 (1%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPAR 492 E+ I VF++ ++ID++GVTKGKG+ GV+ R+ V LPR K +G RK+ G Sbjct: 202 EITIRDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGT 260 Query: 491 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 312 SYT + GQ G+H RTE NK++ KIG K+I P GGF YG+V+ Sbjct: 261 PSYT-PQPGQLGFHRRTEYNKRIIKIGD--------------EPKEINPAGGFVRYGIVR 305 Query: 311 ADYLMIKGCCVGPKKRVVTLRQ 246 Y++++G +G KKR + LR+ Sbjct: 306 NTYVLLEGSILGSKKRPIFLRE 327
>RL3_SULAC (Q4JB40) 50S ribosomal protein L3P| Length = 342 Score = 97.8 bits (242), Expect = 3e-20 Identities = 61/168 (36%), Positives = 94/168 (55%), Gaps = 2/168 (1%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPAR 492 ++P+ VF++ ++ DIIGVTKGKG++GV+ R+ V PR K +G RK+ G + Sbjct: 193 QIPVRDVFREGQLTDIIGVTKGKGFQGVIKRYSVVEFPRWHKHRKGSRKIGARGP-SIST 251 Query: 491 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 312 SY V + GQ G+H RTE NK++ KIG +I P GG +YG+VK Sbjct: 252 PSY-VPQPGQLGFHRRTEYNKRIIKIGD--------------NVNEINPAGGIVNYGLVK 296 Query: 311 ADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFG 168 YL+I+G +G +KR + LR + S + K+ +V+ +S+ G Sbjct: 297 NTYLVIEGSVLGSRKRPLFLRYPIRPSWSPESAP--KITYVNLASQQG 342
>RL3_CLOTE (Q890N9) 50S ribosomal protein L3| Length = 209 Score = 52.8 bits (125), Expect = 9e-07 Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 4/146 (2%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHP 498 E+ +D +F+ E ID+ G +KGKGY+G++ RW R P K HR + + A +P Sbjct: 96 EIKVD-IFEAGEKIDVTGTSKGKGYQGIIKRWNAHRGPMSHGSKFHRAVGSMG--AASYP 152 Query: 497 ARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGV 318 AR AG G T +N +V K + Sbjct: 153 ARTFKNKRMAGHMGNVKSTVLNLEVVKT-------------------------------I 181 Query: 317 VKADYLMIKGCCVGPKKRVVTLRQSL 240 + + ++IKG GP K V +R S+ Sbjct: 182 PEKNLILIKGGIPGPNKGYVIIRNSI 207
>RL3_CLOAB (Q97EH8) 50S ribosomal protein L3| Length = 209 Score = 50.4 bits (119), Expect = 5e-06 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 4/140 (2%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYT 480 +F E +D+ GV+KGKG++G + RWG R P K HR + + G+ P+R + Sbjct: 101 IFAAGEKVDVSGVSKGKGFQGTIRRWGAHRGPMSHGSKFHRAVGSMG--GSSDPSRTFKS 158 Query: 479 VARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 300 G G+ + T +N +V K+ + + + + Sbjct: 159 KKMPGHMGHVNTTVLNVEVAKV-------------------------------IPEKNLI 187 Query: 299 MIKGCCVGPKKRVVTLRQSL 240 +IKG GP K V ++ S+ Sbjct: 188 LIKGGVPGPNKSFVVIKNSV 207
>RL3_PORGI (Q7MTL3) 50S ribosomal protein L3| Length = 205 Score = 49.3 bits (116), Expect = 1e-05 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%) Frame = -3 Query: 644 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPARVSYTV 477 F + +D++G +KGKG++GVV R G + + T H LR +GA +PA+V Sbjct: 100 FSDADFVDVVGTSKGKGFQGVVKRHGFGGVGQATHGQHNRLRAPGAVGACSYPAKVFKGT 159 Query: 476 ARAGQNGYHHRTEMNKKVYKI 414 AGQ G T N +V K+ Sbjct: 160 RMAGQMGNERVTVQNLEVIKV 180
>RL3_BACST (P28600) 50S ribosomal protein L3| Length = 213 Score = 48.9 bits (115), Expect = 1e-05 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 489 EV +D +F + +++D+ G++KGKG++G + R G +R P R R+ +GA P RV Sbjct: 96 EVKVD-IFSEGDIVDVTGISKGKGFQGAIKRHGQSRGPMAHGSRYHRRPGSMGAIAPNRV 154 Query: 488 SYTVARAGQNGYHHRTEMNKKVYKI 414 T G+ G T N K+ K+ Sbjct: 155 FKTKNLPGRMGGERVTIQNLKIVKV 179
>RL3_ENTFA (Q839G4) 50S ribosomal protein L3| Length = 209 Score = 48.9 bits (115), Expect = 1e-05 Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 1/143 (0%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPARV 489 E+ +D VFQ +++D+ G TKGKG++G + R G +R P R R+ +G P RV Sbjct: 96 EIKVD-VFQAGDVVDVTGTTKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNRV 154 Query: 488 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKA 309 AG+ G T N +V K+ V+ Sbjct: 155 FKNKRLAGRMGGDRVTIQNLEVVKVD-------------------------------VER 183 Query: 308 DYLMIKGCCVGPKKRVVTLRQSL 240 + ++IKG G KK ++T++ ++ Sbjct: 184 NVILIKGNIPGAKKSLITIKSAV 206
>RL3_CLOPE (Q8XHS3) 50S ribosomal protein L3| Length = 209 Score = 47.4 bits (111), Expect = 4e-05 Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 4/146 (2%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHP 498 E+ +D F+ + +D+ GV+KGKG++G + RW +R P K HR + A P Sbjct: 96 EIKVDT-FEIGDKVDVSGVSKGKGFQGTIKRWNASRGPMSHGSKFHRAPGSMG--AASDP 152 Query: 497 ARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGV 318 +R G G + T +N +V KI EK+I Sbjct: 153 SRTFKNKRMPGHMGAKNTTVLNLEVVKI---------------MPEKNI----------- 186 Query: 317 VKADYLMIKGCCVGPKKRVVTLRQSL 240 ++IKG GP K V +R S+ Sbjct: 187 -----ILIKGGIPGPNKGTVVIRNSV 207
>RK3_CHLS6 (Q7XYP4) 50S ribosomal protein L3, chloroplast precursor| Length = 302 Score = 47.0 bits (110), Expect = 5e-05 Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 4/79 (5%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHP 498 ++ + +F+ +++D+ G + GKG++G + RWG+ R P K+HR + C P Sbjct: 184 QLKAEELFEVGDLVDVSGTSSGKGFQGSIRRWGMKRGPMSHGSKSHRQHGSIGCSAT--P 241 Query: 497 ARVSYTVARAGQNGYHHRT 441 +RV + AG+ G +T Sbjct: 242 SRVYKGLKMAGRMGNERKT 260
>RL3_BACTN (Q8A476) 50S ribosomal protein L3| Length = 205 Score = 46.6 bits (109), Expect = 7e-05 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPARVSYT 480 +F +D++G +KGKG++GVV R G + + T H RK IGA +PA+V Sbjct: 99 MFNDATFVDVVGTSKGKGFQGVVKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKG 158 Query: 479 VARAGQNGYHHRTEMNKKVYKI 414 + GQ G T N +V K+ Sbjct: 159 MRMGGQLGGDRVTVQNLQVLKV 180
>RL3_BACCR (Q81J42) 50S ribosomal protein L3| Length = 210 Score = 45.4 bits (106), Expect = 1e-04 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPARV 489 EV +D VF E++D+ G++KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 96 EVKVD-VFATGEIVDVTGISKGKGFQGVIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNRV 154 Query: 488 SYTVARAGQNGYHHRTEMNKKVYKI 414 AG+ G T N ++ ++ Sbjct: 155 FKGKKLAGRMGGDQVTIQNLEIVQV 179
>RL3_BACAN (Q81VT0) 50S ribosomal protein L3| Length = 210 Score = 45.4 bits (106), Expect = 1e-04 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPARV 489 EV +D VF E++D+ G++KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 96 EVKVD-VFATGEIVDVTGISKGKGFQGVIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNRV 154 Query: 488 SYTVARAGQNGYHHRTEMNKKVYKI 414 AG+ G T N ++ ++ Sbjct: 155 FKGKKLAGRMGGDQVTIQNLEIVQV 179
>RL3_LISMO (Q8Y440) 50S ribosomal protein L3| Length = 209 Score = 44.7 bits (104), Expect = 3e-04 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 489 EV +D VF + ++ID GV+KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 96 EVKVD-VFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 154 Query: 488 SYTVARAGQNGYHHRTEMNKKVYKI 414 G+ G T N ++ K+ Sbjct: 155 FKNKLLPGRMGGEQITIQNLEIVKV 179
>RL3_LISMF (Q71WE6) 50S ribosomal protein L3| Length = 209 Score = 44.7 bits (104), Expect = 3e-04 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 489 EV +D VF + ++ID GV+KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 96 EVKVD-VFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 154 Query: 488 SYTVARAGQNGYHHRTEMNKKVYKI 414 G+ G T N ++ K+ Sbjct: 155 FKNKLLPGRMGGEQITIQNLEIVKV 179
>RL3_LISIN (Q927K7) 50S ribosomal protein L3| Length = 209 Score = 44.7 bits (104), Expect = 3e-04 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 489 EV +D VF + ++ID GV+KGKG++GV+ R G +R P R R+ +G P RV Sbjct: 96 EVKVD-VFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRV 154 Query: 488 SYTVARAGQNGYHHRTEMNKKVYKI 414 G+ G T N ++ K+ Sbjct: 155 FKNKLLPGRMGGEQITIQNLEIVKV 179
>RL3_BIFLO (Q8G417) 50S ribosomal protein L3| Length = 213 Score = 44.7 bits (104), Expect = 3e-04 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIGAW-HPARVSYTV 477 +F++ +D+ G TKGKG+ G + RWG R +H+ R+ +GA P+R+ Sbjct: 103 LFEEGAEVDVTGTTKGKGFAGTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGK 162 Query: 476 ARAGQNGYHHRTEMNKKV 423 AG+ G+ T N V Sbjct: 163 RMAGRMGHVTATTQNLTV 180
>RL3_AQUPY (Q9ZI50) 50S ribosomal protein L3| Length = 244 Score = 44.3 bits (103), Expect = 3e-04 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIG 510 E+ + VF+ +++D+ G++KG+G+ GV+ RW PR HR R V IG Sbjct: 97 ELRVQDVFKPGDLVDVWGISKGRGFAGVMKRWDFAGFPRSHGHRYHRAVGAIG 149
>RL3_MYCPU (Q98PY0) 50S ribosomal protein L3| Length = 266 Score = 43.9 bits (102), Expect = 4e-04 Identities = 41/154 (26%), Positives = 66/154 (42%) Frame = -3 Query: 650 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVAR 471 ++F E +D+ G++KGKG+ G + R ++ K+H G G P R Sbjct: 97 SIFTPGEFVDVTGISKGKGFAGTIKRHN-QKIGPKSHGG------GGGSKPVR------- 142 Query: 470 AGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIK 291 Q G NK V + G H+ T E +T VK + L++K Sbjct: 143 --QTGSLGDISGNKVVKGMTMPGHLGHEQVT-IQNLEVIMTD---------VKNNILLVK 190 Query: 290 GCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFV 189 G GPKK V +++ K S+ A++ + L+ V Sbjct: 191 GAVPGPKKGFVVIKECAKKIPSKEAVKLVDLEIV 224
>RL3_CHLTE (Q8KAH2) 50S ribosomal protein L3| Length = 209 Score = 43.9 bits (102), Expect = 4e-04 Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 3/86 (3%) Frame = -3 Query: 662 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTR---WGVTRLPRKTHRGLRKVACIGAWHPAR 492 VP+D VF++ + ++++GVTKGKG+ GVV R G +R ++ R + G+ P+R Sbjct: 97 VPVD-VFKEGDKVNVLGVTKGKGFAGVVKRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSR 155 Query: 491 VSYTVARAGQNGYHHRTEMNKKVYKI 414 AG+ G ++T N + K+ Sbjct: 156 TFKGTRMAGRMGGKNKTVQNLVIVKV 181
>RL3_TROWT (Q83FY6) 50S ribosomal protein L3| Length = 210 Score = 43.5 bits (101), Expect = 6e-04 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGV--TRLPRKTHRGLRKVACIGAWH-PARVSYTV 477 +FQ+ +++D++G +KGKG+ G + R +HR RK +GA P+RV Sbjct: 96 IFQEGQLVDVVGKSKGKGFSGTMKRHNFQGVSATHGSHRNHRKPGSVGASSTPSRVFKGT 155 Query: 476 ARAGQNGYHHRTEMNKKVYKI 414 AG+ G T N ++ KI Sbjct: 156 RMAGRLGSSRVTVHNLRLVKI 176
>RL3_TROW8 (Q83I78) 50S ribosomal protein L3| Length = 210 Score = 43.5 bits (101), Expect = 6e-04 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGV--TRLPRKTHRGLRKVACIGAWH-PARVSYTV 477 +FQ+ +++D++G +KGKG+ G + R +HR RK +GA P+RV Sbjct: 96 IFQEGQLVDVVGKSKGKGFSGTMKRHNFQGVSATHGSHRNHRKPGSVGASSTPSRVFKGT 155 Query: 476 ARAGQNGYHHRTEMNKKVYKI 414 AG+ G T N ++ KI Sbjct: 156 RMAGRLGSSRVTVHNLRLVKI 176
>RL3_THETN (Q8R7V4) 50S ribosomal protein L3| Length = 210 Score = 43.5 bits (101), Expect = 6e-04 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGA-WH 501 E+ +D +F+ + +D+ G++KGKG+ GV+ R+G R P K H R+V +GA Sbjct: 96 EIKVD-IFKPGDRVDVTGISKGKGFAGVIKRYGARRGPMSHGSKYH---RRVGSMGATTD 151 Query: 500 PARVSYTVARAGQNGYHHRTEMNKKVYKI 414 P R G+ G T N +V K+ Sbjct: 152 PGRTFKGKKMPGRMGSDRVTIQNLEVVKV 180
>RL3_STRP6 (Q5XED5) 50S ribosomal protein L3| Length = 208 Score = 43.5 bits (101), Expect = 6e-04 Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 1/136 (0%) Frame = -3 Query: 644 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 468 F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159 Query: 467 GQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKG 288 G+ G + T N ++ ++ +++ + +++KG Sbjct: 160 GRMGGNRVTVQNLEIVQV-------------------------------ILEKNVILVKG 188 Query: 287 CCVGPKKRVVTLRQSL 240 G KK ++T++ ++ Sbjct: 189 NVPGAKKSLITIKSAV 204
>RL3_STRP1 (Q9A1X4) 50S ribosomal protein L3| Length = 208 Score = 43.5 bits (101), Expect = 6e-04 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%) Frame = -3 Query: 644 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 468 F+ +++D+ G++KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FEAGDVVDVTGISKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159 Query: 467 GQNGYHHRTEMNKKVYKI 414 G+ G + T N ++ ++ Sbjct: 160 GRMGGNRVTVQNLEIVQV 177
>RL3_BACSU (P42920) 50S ribosomal protein L3 (BL3)| Length = 209 Score = 43.5 bits (101), Expect = 6e-04 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPARV 489 EV ++ +F E++D+ GV+KGKG++G + R G +R P R R+ +G P RV Sbjct: 96 EVKVE-IFSAGEIVDVTGVSKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMGPVDPNRV 154 Query: 488 SYTVARAGQNGYHHRTEMNKKVYKI 414 G+ G T N ++ K+ Sbjct: 155 FKGKLLPGRMGGEQITVQNLEIVKV 179
>RL3_THEMA (P38515) 50S ribosomal protein L3| Length = 207 Score = 43.1 bits (100), Expect = 7e-04 Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR----KTHRGLRKVACIGAWHPARVSYT 480 VF+K E +D+ G TKG+G+ G + RWG + P+ K HR L V PA++ Sbjct: 97 VFEKGEYVDVTGWTKGRGFAGAMKRWGFSGGPKSHGSKFHRELGSVG--QHTEPAKIWKG 154 Query: 479 VARAGQNGYHHRTEMNKKVYKI 414 G+ G T N +V I Sbjct: 155 KKMPGRYGNERVTVRNLQVVDI 176
>RL3_SPIKU (P60457) 50S ribosomal protein L3| Length = 258 Score = 43.1 bits (100), Expect = 7e-04 Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 1/137 (0%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWHPARVSYTVAR 471 +F E +D+ G +KGKG+ G + R +R P G R V +GA P R+ + Sbjct: 98 IFTAGEFVDVTGTSKGKGFTGSIKRHNYSRGPMGHGSGYHRGVGSMGAIAPNRILKSKKM 157 Query: 470 AGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIK 291 G G T N ++ I TEK+ L++K Sbjct: 158 PGHIGTEKVTIQNLEIIAID---------------TEKNA----------------LLVK 186 Query: 290 GCCVGPKKRVVTLRQSL 240 G GPKK+ V +++++ Sbjct: 187 GSIPGPKKQFVVIKEAI 203
>RM03_BOVIN (Q3ZBX6) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)| Length = 348 Score = 42.4 bits (98), Expect = 0.001 Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 5/84 (5%) Frame = -3 Query: 650 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 486 A F+ + +D+ T GKG++GV+ RWG P KTH R+ I ARV Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTH---RRPGAISTGDVARVW 252 Query: 485 YTVARAGQNGYHHRTEMNKKVYKI 414 GQ G RT KV++I Sbjct: 253 PGTKMPGQLGNVDRTAFGLKVWRI 276
>RL3_STRP8 (P60452) 50S ribosomal protein L3| Length = 208 Score = 42.4 bits (98), Expect = 0.001 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Frame = -3 Query: 644 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 468 F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159 Query: 467 GQNGYHHRTEMNKKVYKI 414 G+ G + T N ++ ++ Sbjct: 160 GRMGGNRVTVQNLEIVQV 177
>RL3_STRP3 (P60451) 50S ribosomal protein L3| Length = 208 Score = 42.4 bits (98), Expect = 0.001 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Frame = -3 Query: 644 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 468 F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159 Query: 467 GQNGYHHRTEMNKKVYKI 414 G+ G + T N ++ ++ Sbjct: 160 GRMGGNRVTVQNLEIVQV 177
>RL3_STRA5 (Q8E2D1) 50S ribosomal protein L3| Length = 208 Score = 42.4 bits (98), Expect = 0.001 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Frame = -3 Query: 644 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 468 F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159 Query: 467 GQNGYHHRTEMNKKVYKI 414 G+ G + T N ++ ++ Sbjct: 160 GRMGGNRVTVQNLEIVQV 177
>RL3_STRA3 (Q8E7T8) 50S ribosomal protein L3| Length = 208 Score = 42.4 bits (98), Expect = 0.001 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Frame = -3 Query: 644 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 468 F+ +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FEAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKRLA 159 Query: 467 GQNGYHHRTEMNKKVYKI 414 G+ G + T N ++ ++ Sbjct: 160 GRMGGNRVTVQNLEIVQV 177
>RL3_OCEIH (Q8ETY2) 50S ribosomal protein L3| Length = 209 Score = 42.4 bits (98), Expect = 0.001 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 2/86 (2%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPAR 492 E+ +D +F+ E ID+ G +KGKG++GV+ R G R P TH R +G P R Sbjct: 96 EIKVD-IFESGEKIDVTGTSKGKGFQGVIKRHGQQRGP-TTHGSHFHRAPGAMGVIDPMR 153 Query: 491 VSYTVARAGQNGYHHRTEMNKKVYKI 414 V G G T N +V + Sbjct: 154 VFKGKKLPGHMGSEQVTIQNLEVVSV 179
>RL3_AQUAE (O66431) 50S ribosomal protein L3| Length = 241 Score = 42.0 bits (97), Expect = 0.002 Identities = 34/161 (21%), Positives = 64/161 (39%), Gaps = 2/161 (1%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIG-AWHPAR 492 ++ ++ VF+ +++D+ G++KG+G+ G + RW P+ HR R V IG P R Sbjct: 97 QLKVEDVFKPGDLVDVWGISKGRGFAGAMKRWDFAGFPKSHGHRYHRAVGAIGQRTDPGR 156 Query: 491 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVK 312 V G G K + G F + + Sbjct: 157 VWKGKRMPGHYG-------------------------------AKPVRVQGLFVVDVLPE 185 Query: 311 ADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFV 189 + +++KG G K +V + QS + L++ + +F+ Sbjct: 186 ENAILVKGSVPGHNKGIVVVEQSTIAYRKSQKLKQKRYQFI 226
>RM03_HUMAN (P09001) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)| Length = 348 Score = 42.0 bits (97), Expect = 0.002 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%) Frame = -3 Query: 650 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 486 A F+ + +D+ T GKG++GV+ RWG P KTH R+ + RV Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTH---RRPGAVATGDIGRVW 252 Query: 485 YTVARAGQNGYHHRTEMNKKVYKI 414 G+ G +RTE KV++I Sbjct: 253 PGTKMPGKMGNIYRTEYGLKVWRI 276
>RM03_MOUSE (Q99N95) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)| Length = 348 Score = 41.6 bits (96), Expect = 0.002 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%) Frame = -3 Query: 650 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 486 A F+ + +D+ T GKG++GV+ RWG P KTH R+ I ARV Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPASHGQTKTH---RRPGAISTGDIARVW 252 Query: 485 YTVARAGQNGYHHRTEMNKKVYKI 414 G+ G +RT KV+++ Sbjct: 253 PGTKMPGRMGNQNRTVYGLKVWRV 276
>RL3_STRMU (Q8DS16) 50S ribosomal protein L3| Length = 208 Score = 41.6 bits (96), Expect = 0.002 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Frame = -3 Query: 644 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 468 F+ +++D+ G TKGKG++G + R G +R P R R+ +G P RV A Sbjct: 100 FEAGDVVDVTGTTKGKGFQGAIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLA 159 Query: 467 GQNGYHHRTEMNKKVYKI 414 G+ G + T N +V ++ Sbjct: 160 GRMGGNRVTVQNLEVVQV 177
>RL3_BACHD (Q9Z9L4) 50S ribosomal protein L3| Length = 209 Score = 41.6 bits (96), Expect = 0.002 Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 1/143 (0%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGAWHPARV 489 E+ +DA F + +++D+ G +KGKG+ G + R R P R R+ +G P RV Sbjct: 96 EIKVDA-FAEGDIVDVTGTSKGKGFAGAIKRHNQARGPMSHGSRYHRRPGSMGPVDPNRV 154 Query: 488 SYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKA 309 A G+ G T N ++ K+ + Sbjct: 155 FKGKALPGRMGGEQVTVQNLEIIKVD-------------------------------AER 183 Query: 308 DYLMIKGCCVGPKKRVVTLRQSL 240 + L++KG G KK VT+R ++ Sbjct: 184 NLLLVKGNVPGAKKSYVTVRSAI 206
>RM03_RAT (P18665) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)| Length = 347 Score = 41.6 bits (96), Expect = 0.002 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%) Frame = -3 Query: 650 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLRKVACIGAWHPARVS 486 A F+ + +D+ T GKG++GV+ RWG P KTH R+ I ARV Sbjct: 196 AHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPASHGQTKTH---RRPGAISTGDIARVW 252 Query: 485 YTVARAGQNGYHHRTEMNKKVYKI 414 G+ G +RT KV+++ Sbjct: 253 PGTKMPGKMGNQNRTVYGLKVWRV 276
>RL3_CORDI (P60453) 50S ribosomal protein L3| Length = 218 Score = 41.2 bits (95), Expect = 0.003 Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIGAW-HPARVSYTV 477 +F+ +D+ G TKGKGY G + R G R+V IGA P RV Sbjct: 105 IFEGINFVDVTGTTKGKGYAGAMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGT 164 Query: 476 ARAGQNGYHHRTEMNKKVYKI 414 AG+ G T N KV KI Sbjct: 165 RMAGRMGSDRVTTQNLKVQKI 185
>RL3_STAAW (P60450) 50S ribosomal protein L3| Length = 220 Score = 40.8 bits (94), Expect = 0.004 Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 8/152 (5%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 EV +D F ++ID+ GV+KGKG++G + R G +R P Sbjct: 104 EVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP---------------------- 140 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGV 318 + HR G VG + DAS F + +K MGG + V Sbjct: 141 -----MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLEV 185 Query: 317 VKAD----YLMIKGCCVGPKKRVVTLRQSLLK 234 V+ D +++KG GPKK +V +R S+ K Sbjct: 186 VQVDTENKVILVKGNVPGPKKGLVEIRTSIKK 217
>RL3_STAAS (Q6G771) 50S ribosomal protein L3| Length = 220 Score = 40.8 bits (94), Expect = 0.004 Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 8/152 (5%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 EV +D F ++ID+ GV+KGKG++G + R G +R P Sbjct: 104 EVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP---------------------- 140 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGV 318 + HR G VG + DAS F + +K MGG + V Sbjct: 141 -----MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLEV 185 Query: 317 VKAD----YLMIKGCCVGPKKRVVTLRQSLLK 234 V+ D +++KG GPKK +V +R S+ K Sbjct: 186 VQVDTENKVILVKGNVPGPKKGLVEIRTSIKK 217
>RL3_STAAR (Q6GEI3) 50S ribosomal protein L3| Length = 220 Score = 40.8 bits (94), Expect = 0.004 Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 8/152 (5%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 EV +D F ++ID+ GV+KGKG++G + R G +R P Sbjct: 104 EVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP---------------------- 140 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGV 318 + HR G VG + DAS F + +K MGG + V Sbjct: 141 -----MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLEV 185 Query: 317 VKAD----YLMIKGCCVGPKKRVVTLRQSLLK 234 V+ D +++KG GPKK +V +R S+ K Sbjct: 186 VQVDTENKVILVKGNVPGPKKGLVEIRTSIKK 217
>RL3_STAAN (P60449) 50S ribosomal protein L3| Length = 220 Score = 40.8 bits (94), Expect = 0.004 Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 8/152 (5%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 EV +D F ++ID+ GV+KGKG++G + R G +R P Sbjct: 104 EVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP---------------------- 140 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGV 318 + HR G VG + DAS F + +K MGG + V Sbjct: 141 -----MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLEV 185 Query: 317 VKAD----YLMIKGCCVGPKKRVVTLRQSLLK 234 V+ D +++KG GPKK +V +R S+ K Sbjct: 186 VQVDTENKVILVKGNVPGPKKGLVEIRTSIKK 217
>RL3_STAAM (P60448) 50S ribosomal protein L3| Length = 220 Score = 40.8 bits (94), Expect = 0.004 Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 8/152 (5%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 EV +D F ++ID+ GV+KGKG++G + R G +R P Sbjct: 104 EVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP---------------------- 140 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGV 318 + HR G VG + DAS F + +K MGG + V Sbjct: 141 -----MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLEV 185 Query: 317 VKAD----YLMIKGCCVGPKKRVVTLRQSLLK 234 V+ D +++KG GPKK +V +R S+ K Sbjct: 186 VQVDTENKVILVKGNVPGPKKGLVEIRTSIKK 217
>RL3_STAAC (Q5HDV8) 50S ribosomal protein L3| Length = 209 Score = 40.8 bits (94), Expect = 0.004 Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 8/152 (5%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 EV +D F ++ID+ GV+KGKG++G + R G +R P Sbjct: 93 EVSVDT-FVAGDVIDVTGVSKGKGFQGAIKRHGQSRGP---------------------- 129 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGV 318 + HR G VG + DAS F + +K MGG + V Sbjct: 130 -----MSHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLEV 174 Query: 317 VKAD----YLMIKGCCVGPKKRVVTLRQSLLK 234 V+ D +++KG GPKK +V +R S+ K Sbjct: 175 VQVDTENKVILVKGNVPGPKKGLVEIRTSIKK 206
>RL3_LEPIN (Q9XD36) 50S ribosomal protein L3| Length = 206 Score = 40.4 bits (93), Expect = 0.005 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Frame = -3 Query: 656 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGA-WHPARVSY 483 I VF +++ + GV+KG+GY+GVV R G P R R +GA P+RV Sbjct: 98 IQDVFAVSDVVKVTGVSKGRGYQGVVKRHGHAGGPGAHGSRFHRHPGSMGANSTPSRVFK 157 Query: 482 TVARAGQNGYHHRTEMNKKVYKIGK 408 V G+ G T N KV +I + Sbjct: 158 GVKLPGRTGSQKTTVRNLKVVRINE 182
>RL3_LEPIC (Q72NG1) 50S ribosomal protein L3| Length = 206 Score = 40.4 bits (93), Expect = 0.005 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Frame = -3 Query: 656 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGA-WHPARVSY 483 I VF +++ + GV+KG+GY+GVV R G P R R +GA P+RV Sbjct: 98 IQDVFAVSDVVKVTGVSKGRGYQGVVKRHGHAGGPGAHGSRFHRHPGSMGANSTPSRVFK 157 Query: 482 TVARAGQNGYHHRTEMNKKVYKIGK 408 V G+ G T N KV +I + Sbjct: 158 GVKLPGRTGSQKTTVRNLKVVRINE 182
>RL3_MYCCT (P10134) 50S ribosomal protein L3| Length = 223 Score = 40.0 bits (92), Expect = 0.006 Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 4/155 (2%) Frame = -3 Query: 662 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK----THRGLRKVACIGAWHPA 495 + + +F E +D+ G++KGKG+ G + R +R P HRG+ + I Sbjct: 94 INVSDIFVSGEYVDVTGISKGKGFAGGIKRHNYSRGPMAHGSGYHRGIGSMGAI----IN 149 Query: 494 RVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVV 315 R+ + G G RT N ++ I + Sbjct: 150 RIFKSKKMPGHMGNAKRTIQNLEIIAIDQ------------------------------- 178 Query: 314 KADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALE 210 + ++IKG GPK V ++Q++ +S+ A+E Sbjct: 179 SNNIMLIKGSIPGPKNSFVQIKQNVKGMSSKQAVE 213
>RL3_STRR6 (Q8CWV8) 50S ribosomal protein L3| Length = 208 Score = 40.0 bits (92), Expect = 0.006 Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 1/136 (0%) Frame = -3 Query: 644 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 468 F +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLA 159 Query: 467 GQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKG 288 G+ G T N +V ++ V + + ++IKG Sbjct: 160 GRMGGDRVTIQNLEVVQV-------------------------------VPEKNVILIKG 188 Query: 287 CCVGPKKRVVTLRQSL 240 G KK ++T++ ++ Sbjct: 189 NVPGAKKSLITIKSAV 204
>RL3_STRPN (Q97SV5) 50S ribosomal protein L3| Length = 208 Score = 40.0 bits (92), Expect = 0.006 Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 1/136 (0%) Frame = -3 Query: 644 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVSYTVARA 468 F +++D+ G +KGKG++GV+ R G +R P R R+ +G P RV A Sbjct: 100 FAAGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLA 159 Query: 467 GQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKG 288 G+ G T N +V ++ V + + ++IKG Sbjct: 160 GRMGGDRVTIQNLEVVQV-------------------------------VPEKNVILIKG 188 Query: 287 CCVGPKKRVVTLRQSL 240 G KK ++T++ ++ Sbjct: 189 NVPGAKKSLITIKSAV 204
>RL3_GEOSL (P60454) 50S ribosomal protein L3| Length = 210 Score = 39.7 bits (91), Expect = 0.008 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 3/80 (3%) Frame = -3 Query: 644 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIG-AWHPARVSYTVA 474 F+ E ID+ G + GKG++GV+ RWG R R +H R IG + +P+RV Sbjct: 102 FEVGEYIDVTGTSIGKGFQGVIKRWGF-RGGRSSHGSCFHRAPGSIGSSAYPSRVFKNKK 160 Query: 473 RAGQNGYHHRTEMNKKVYKI 414 GQ G T +V ++ Sbjct: 161 MPGQLGNERVTVQRLQVVRV 180
>RL3_THETH (P52860) 50S ribosomal protein L3| Length = 206 Score = 39.7 bits (91), Expect = 0.008 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 3/81 (3%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTV 477 +F+ E +D+ G +KG+G+ GV+ RW P H+ R IG P RV Sbjct: 95 IFKPGERVDVTGTSKGRGFAGVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGK 154 Query: 476 ARAGQNGYHHRTEMNKKVYKI 414 AG G T MN +V + Sbjct: 155 KMAGHYGAERVTVMNLEVVDV 175
>RL3_THET8 (Q5SHN8) 50S ribosomal protein L3| Length = 206 Score = 39.7 bits (91), Expect = 0.008 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 3/81 (3%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTV 477 +F+ E +D+ G +KG+G+ GV+ RW P H+ R IG P RV Sbjct: 95 IFKPGERVDVTGTSKGRGFAGVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGK 154 Query: 476 ARAGQNGYHHRTEMNKKVYKI 414 AG G T MN +V + Sbjct: 155 KMAGHYGAERVTVMNLEVVDV 175
>RUVB_LISMO (Q8Y6Z8) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 335 Score = 39.3 bits (90), Expect = 0.011 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 8/118 (6%) Frame = +3 Query: 57 VSHVRF---DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFL 212 + H+ F +++T+++LR+S+ L+ I+ L G E A P++ + K DF Sbjct: 177 IDHLEFYTEEQLTEIVLRTSNILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFA 233 Query: 213 QCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 386 Q G + + LA+ TLL D LD L HTI+ ++ G V L + S G Sbjct: 234 QVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290
>RUVB_LISMF (Q71ZD8) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 335 Score = 39.3 bits (90), Expect = 0.011 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 8/118 (6%) Frame = +3 Query: 57 VSHVRF---DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFL 212 + H+ F +++T+++LR+S+ L+ I+ L G E A P++ + K DF Sbjct: 177 IDHLEFYTEEQLTEIVLRTSNILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFA 233 Query: 213 QCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 386 Q G + + LA+ TLL D LD L HTI+ ++ G V L + S G Sbjct: 234 QVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290
>RK3B_ARATH (Q9LRN8) 50S ribosomal protein L3-2, chloroplast precursor| Length = 324 Score = 39.3 bits (90), Expect = 0.011 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 5/82 (6%) Frame = -3 Query: 644 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-----THRGLRKVACIGAWHPARVSYT 480 F + +D+ G+T+GKG++G + R G + +P +HR A P +V Sbjct: 176 FVPGQYVDVTGITRGKGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDA--PGKVFKG 233 Query: 479 VARAGQNGYHHRTEMNKKVYKI 414 AG+ G RT N VYKI Sbjct: 234 RKMAGRMGADQRTVKNVWVYKI 255
>RL3_CORGL (Q8NT09) 50S ribosomal protein L3| Length = 218 Score = 39.3 bits (90), Expect = 0.011 Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG-AWHPARVSYTV 477 +F + +D+ G TKGKGY G + R G R+V IG A P R+ Sbjct: 105 IFNDIKFVDVTGTTKGKGYAGAMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGK 164 Query: 476 ARAGQNGYHHRTEMNKKVYKI 414 AG+ G T N KV KI Sbjct: 165 RMAGRMGNDRVTTQNLKVQKI 185
>RL3_STAES (Q8CRG0) 50S ribosomal protein L3| Length = 220 Score = 38.9 bits (89), Expect = 0.014 Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 8/152 (5%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 EV +D F+ ++ID+ GV+KGKG++G + R G R P Sbjct: 104 EVSVDT-FETGDIIDVTGVSKGKGFQGAIKRHGQGRGP---------------------- 140 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGV 318 + HR G VG + DAS F + +K MGG + V Sbjct: 141 -----MAHGSHFHRAP--------GSVGMAS-DASKVF-KGQKMPGRMGGNTVTVQNLEV 185 Query: 317 VKAD----YLMIKGCCVGPKKRVVTLRQSLLK 234 V+ D +++KG GPKK +V + S+ K Sbjct: 186 VQVDTENSVILVKGNVPGPKKGLVEITTSIKK 217
>RL3_STAEQ (Q5HLZ9) 50S ribosomal protein L3| Length = 220 Score = 38.9 bits (89), Expect = 0.014 Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 8/152 (5%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 EV +D F+ ++ID+ GV+KGKG++G + R G R P Sbjct: 104 EVSVDT-FETGDIIDVTGVSKGKGFQGAIKRHGQGRGP---------------------- 140 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGV 318 + HR G VG + DAS F + +K MGG + V Sbjct: 141 -----MAHGSHFHRAP--------GSVGMAS-DASKVF-KGQKMPGRMGGNTVTVQNLEV 185 Query: 317 VKAD----YLMIKGCCVGPKKRVVTLRQSLLK 234 V+ D +++KG GPKK +V + S+ K Sbjct: 186 VQVDTENSVILVKGNVPGPKKGLVEITTSIKK 217
>RL3_DEIRA (Q9RXK2) 50S ribosomal protein L3| Length = 211 Score = 38.9 bits (89), Expect = 0.014 Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 10/88 (11%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHR-----GLRKVACIGAWHP 498 +F + E ID G +KGKG +GV+ RW P +K HR G RK P Sbjct: 95 IFAEGEKIDATGTSKGKGTQGVMKRWNFAGGPASHGSKKWHRRPGSIGQRKT-------P 147 Query: 497 ARVSYTVARAGQNGYHHRTEMNKKVYKI 414 RV AG G T N +V +I Sbjct: 148 GRVYKGKRMAGHMGMERVTVQNLEVVEI 175
>RL3_NEIMB (P60444) 50S ribosomal protein L3| Length = 214 Score = 38.9 bits (89), Expect = 0.014 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%) Frame = -3 Query: 650 AVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVSYT 480 ++F+ +++D+ G +KGKG+ G + R +G R R R IG A P RV Sbjct: 102 SMFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPG 161 Query: 479 VARAGQNGYHHRTEMNKKVYKI 414 AGQ G T +V ++ Sbjct: 162 KRMAGQYGNTKATVQKLEVVRV 183
>RL3_NEIMA (P60443) 50S ribosomal protein L3| Length = 214 Score = 38.9 bits (89), Expect = 0.014 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%) Frame = -3 Query: 650 AVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVSYT 480 ++F+ +++D+ G +KGKG+ G + R +G R R R IG A P RV Sbjct: 102 SMFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPG 161 Query: 479 VARAGQNGYHHRTEMNKKVYKI 414 AGQ G T +V ++ Sbjct: 162 KRMAGQYGNTKATVQKLEVVRV 183
>RUVB_LISIN (Q92BI2) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 335 Score = 38.9 bits (89), Expect = 0.014 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 8/118 (6%) Frame = +3 Query: 57 VSHVRF---DKMTQLILRSSSSLELAIEPLLLVGGLETA-----VPKLGRGVDKLELDFL 212 + H+ F +++T+++LR+S L+ I+ L G E A P++ + K DF Sbjct: 177 IDHLEFYTEEQLTEIVLRTSGILDTKIDDL---GAREIARRSRGTPRIANRLLKRVRDFA 233 Query: 213 QCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVREATHGSDVLLGPVELSRG 386 Q G + + LA+ TLL D LD L HTI+ ++ G V L + S G Sbjct: 234 QVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTII-QSFRGGPVGLDTIAASIG 290
>RL3_STAHJ (Q4L8B4) 50S ribosomal protein L3| Length = 220 Score = 38.1 bits (87), Expect = 0.024 Identities = 41/152 (26%), Positives = 62/152 (40%), Gaps = 8/152 (5%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 486 EV +D F+ ++ID+ G +KGKG++G + R G R P Sbjct: 104 EVTVDT-FEAGDIIDVTGTSKGKGFQGAIKRHGQARGP---------------------- 140 Query: 485 YTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGG----FPHYGV 318 + HR G VG + DAS F + +K MGG + V Sbjct: 141 -----MAHGSHFHRAP--------GSVGMAS-DASRVF-KGQKMPGRMGGNTVTVQNLEV 185 Query: 317 VKAD----YLMIKGCCVGPKKRVVTLRQSLLK 234 V+ D +++KG GPKK V ++ S+ K Sbjct: 186 VQVDTENNVILVKGNVPGPKKGFVEIQTSIKK 217
>RL3_VIBPA (Q87T13) 50S ribosomal protein L3| Length = 209 Score = 37.7 bits (86), Expect = 0.031 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYT 480 +F + + +D+ G +KGKG++G V RW R TH R IG P RV Sbjct: 100 LFNETKKVDVTGTSKGKGFQGAVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158 Query: 479 VARAGQNGYHHRTEMNKKVYKI 414 AG G T N ++ ++ Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180
>RL3_COREF (Q8FS80) 50S ribosomal protein L3| Length = 218 Score = 37.7 bits (86), Expect = 0.031 Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG-AWHPARVSYTV 477 +F + +D+ G +KGKGY G + R G R+V IG A P R+ Sbjct: 105 IFNDVKFVDVTGTSKGKGYAGAMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGK 164 Query: 476 ARAGQNGYHHRTEMNKKVYKI 414 AG+ G T N KV KI Sbjct: 165 RMAGRMGNDRVTTQNLKVQKI 185
>RL3_BUCBP (Q89A68) 50S ribosomal protein L3| Length = 214 Score = 37.4 bits (85), Expect = 0.041 Identities = 28/81 (34%), Positives = 34/81 (41%), Gaps = 3/81 (3%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPARVSYTV 477 +F + +DIIG +KGKG+ G V RW L R IG P RV Sbjct: 102 LFSNIKKVDIIGTSKGKGFCGTVKRWNFHTQDATHGNSLSHRAPGSIGQNQTPGRVFKGK 161 Query: 476 ARAGQNGYHHRTEMNKKVYKI 414 AG G H T N + KI Sbjct: 162 KMAGHLGNHRVTVQNLDIVKI 182
>RL3_BORPE (Q7VTD3) 50S ribosomal protein L3| Length = 233 Score = 37.4 bits (85), Expect = 0.041 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%) Frame = -3 Query: 662 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPAR 492 + +++VF+ + +D+ G + GKG+ G + R +G R R R IG A P R Sbjct: 113 IAVESVFEAGQQVDVTGTSIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGR 172 Query: 491 VSYTVARAGQNGYHHRTEMNKKVYKI 414 + +G G RT N V ++ Sbjct: 173 IFPGKRMSGHMGDVTRTVQNLDVVRV 198
>RL3_BORPA (Q7W2F6) 50S ribosomal protein L3| Length = 233 Score = 37.4 bits (85), Expect = 0.041 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%) Frame = -3 Query: 662 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPAR 492 + +++VF+ + +D+ G + GKG+ G + R +G R R R IG A P R Sbjct: 113 IAVESVFEAGQQVDVTGTSIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGR 172 Query: 491 VSYTVARAGQNGYHHRTEMNKKVYKI 414 + +G G RT N V ++ Sbjct: 173 IFPGKRMSGHMGDVTRTVQNLDVVRV 198
>RL3_BORBR (Q7WRC5) 50S ribosomal protein L3| Length = 233 Score = 37.4 bits (85), Expect = 0.041 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%) Frame = -3 Query: 662 VPIDAVFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPAR 492 + +++VF+ + +D+ G + GKG+ G + R +G R R R IG A P R Sbjct: 113 IAVESVFEAGQQVDVTGTSIGKGFAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGR 172 Query: 491 VSYTVARAGQNGYHHRTEMNKKVYKI 414 + +G G RT N V ++ Sbjct: 173 IFPGKRMSGHMGDVTRTVQNLDVVRV 198
>RL3_VIBVY (Q7MPI8) 50S ribosomal protein L3| Length = 209 Score = 37.0 bits (84), Expect = 0.053 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYT 480 +F + + +D+ G +KGKG++G V RW R TH R IG P RV Sbjct: 100 LFNEVKKVDVTGTSKGKGFQGTVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158 Query: 479 VARAGQNGYHHRTEMNKKVYKI 414 AG G T N ++ ++ Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180
>RL3_VIBVU (Q8DE39) 50S ribosomal protein L3| Length = 209 Score = 37.0 bits (84), Expect = 0.053 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYT 480 +F + + +D+ G +KGKG++G V RW R TH R IG P RV Sbjct: 100 LFNEVKKVDVTGTSKGKGFQGTVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158 Query: 479 VARAGQNGYHHRTEMNKKVYKI 414 AG G T N ++ ++ Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180
>RL3_VIBCH (Q9KNY4) 50S ribosomal protein L3| Length = 209 Score = 37.0 bits (84), Expect = 0.053 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-PARVSYT 480 +F + + +D+ G +KGKG++G V RW R TH R IG P RV Sbjct: 100 LFNEVKKVDVTGTSKGKGFQGAVKRWNF-RTQDMTHGNSLSHRAPGSIGQCQTPGRVFKG 158 Query: 479 VARAGQNGYHHRTEMNKKVYKI 414 AG G T N ++ ++ Sbjct: 159 KKMAGHMGAERVTTQNLEIVRV 180
>RL3_BUCAP (Q8K950) 50S ribosomal protein L3| Length = 209 Score = 37.0 bits (84), Expect = 0.053 Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 4/82 (4%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 480 +F + +D+ G++KGKG+ G V RW R TH R IG P RV Sbjct: 100 IFNDIKKVDVTGISKGKGFSGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGRVFKG 158 Query: 479 VARAGQNGYHHRTEMNKKVYKI 414 AG G + T N + KI Sbjct: 159 KKMAGHLGNNRVTVQNLNIVKI 180
>RL3_CHLCV (Q824Q1) 50S ribosomal protein L3| Length = 221 Score = 37.0 bits (84), Expect = 0.053 Identities = 38/137 (27%), Positives = 54/137 (39%), Gaps = 2/137 (1%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PARVSYTVA 474 V + +DI GV+KGKG++GV+ R+G P+ G R IG P R Sbjct: 111 VLEDISSVDISGVSKGKGFQGVMKRFGFRGGPKTHGSGFHRHAGSIGMRSTPGRCFPGSK 170 Query: 473 RAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMI 294 R G + T N +V KI EK + L++ Sbjct: 171 RPSHMGTVNVTVKNLEVVKID---------------LEKKV----------------LLV 199 Query: 293 KGCCVGPKKRVVTLRQS 243 KG GP+ VV +R+S Sbjct: 200 KGAIPGPRGSVVVIRRS 216
>RM03_CAEEL (P49404) Putative mitochondrial 39S ribosomal protein L3| Length = 403 Score = 37.0 bits (84), Expect = 0.053 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 2/84 (2%) Frame = -3 Query: 659 PIDAV-FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARVS 486 P+DA F + + G T G++G + RWG+ P R+T + R++ +G+ AR+ Sbjct: 212 PLDARHFGVGQYVTATGKTIDWGFQGGMHRWGMRGQPTRRTTKSHRRIGSVGSVGDARIW 271 Query: 485 YTVARAGQNGYHHRTEMNKKVYKI 414 G GY RT ++ +I Sbjct: 272 PGKRMPGHMGYEWRTVSGLEIVRI 295
>RL3_MYCGA (O52332) 50S ribosomal protein L3| Length = 236 Score = 36.6 bits (83), Expect = 0.070 Identities = 22/77 (28%), Positives = 40/77 (51%) Frame = -3 Query: 656 IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTV 477 ++ +FQ+ +++D+ TKG+G+ G + RW ++ K H GA +P R +V Sbjct: 96 VEELFQEGQVVDVQARTKGRGFTGAIKRWNF-KIGSKGH---------GAGYPHRFQGSV 145 Query: 476 ARAGQNGYHHRTEMNKK 426 +AG+ G + M K Sbjct: 146 -QAGRGGSQAQRVMKGK 161
>RL3_TREPA (O83219) 50S ribosomal protein L3| Length = 208 Score = 36.6 bits (83), Expect = 0.070 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH--RGLRKVACIG-AWHPARVSYTV 477 V + +D+ ++KGKG++GVV RWG + R +H + R+ G P R V Sbjct: 98 VLESVRYLDVCALSKGKGFQGVVKRWGFSG-GRSSHGSKFHREAGSTGQCTSPGRTFKNV 156 Query: 476 ARAGQNGYHHRTEMNKKVYKI 414 G+ G T N ++ +I Sbjct: 157 KMPGRMGAERVTVQNLRIERI 177
>RL3_MYCTU (P60442) 50S ribosomal protein L3| Length = 217 Score = 36.2 bits (82), Expect = 0.091 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 5/83 (6%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPARVSY 483 +F +D+ G +KGKG+ G + R G + + HR R + G PARV Sbjct: 105 IFADGSYVDVTGTSKGKGFAGTMKRHGFRGQGASHGAQAVHR--RPGSIGGCATPARVFK 162 Query: 482 TVARAGQNGYHHRTEMNKKVYKI 414 AG+ G T +N V+K+ Sbjct: 163 GTRMAGRMGNDRVTVLNLLVHKV 185
>RL3_MYCBO (P60441) 50S ribosomal protein L3| Length = 217 Score = 36.2 bits (82), Expect = 0.091 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 5/83 (6%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPARVSY 483 +F +D+ G +KGKG+ G + R G + + HR R + G PARV Sbjct: 105 IFADGSYVDVTGTSKGKGFAGTMKRHGFRGQGASHGAQAVHR--RPGSIGGCATPARVFK 162 Query: 482 TVARAGQNGYHHRTEMNKKVYKI 414 AG+ G T +N V+K+ Sbjct: 163 GTRMAGRMGNDRVTVLNLLVHKV 185
>RL3_PSEAE (Q9HWD5) 50S ribosomal protein L3| Length = 211 Score = 36.2 bits (82), Expect = 0.091 Identities = 13/32 (40%), Positives = 23/32 (71%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 570 ++ +D +FQ +M+D+ G +KGKG+ G + RW Sbjct: 95 QITVD-LFQAGQMVDVTGESKGKGFAGTIKRW 125
>RL3_BORBU (P94267) 50S ribosomal protein L3| Length = 206 Score = 36.2 bits (82), Expect = 0.091 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 4/88 (4%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHP 498 E+ +D VF+ + +D+ G TKGKG++G + R + P K HR L A P Sbjct: 94 EIKVD-VFKSVKYVDVTGTTKGKGFQGAMKRHNFSGGPSSHGSKFHRHLGGTG--QATTP 150 Query: 497 ARVSYTVARAGQNGYHHRTEMNKKVYKI 414 AR AG+ + +T N +V I Sbjct: 151 ARTFKGTKMAGRMAGNQQTIQNLEVVLI 178
>RL3_LACPL (Q88XY6) 50S ribosomal protein L3| Length = 209 Score = 35.8 bits (81), Expect = 0.12 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIGAWHPARV 489 EV D +F + +D+ G+TKG GY+G + + G +R P R R+ +GA RV Sbjct: 97 EVKAD-IFAAGDAVDVTGITKGHGYQGNIHKDGQSRGPMAHGSRYHRRPGSMGA-IINRV 154 Query: 488 SYTVARAGQNGYHHRTEMNKKVYK 417 G+ G H RT N ++ + Sbjct: 155 FKGKKLPGRMGNHQRTMQNLQIVR 178
>RL3_FUSNN (Q8RIF5) 50S ribosomal protein L3| Length = 211 Score = 35.8 bits (81), Expect = 0.12 Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 4/88 (4%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG--AWHP 498 E+ +D V + +DI G +KGKG GV+ + G + R R R IG +W P Sbjct: 94 EIKVD-VLTEVGYVDITGTSKGKGTSGVMKKHGFSGNRASHGVSRNHRLGGSIGMSSW-P 151 Query: 497 ARVSYTVARAGQNGYHHRTEMNKKVYKI 414 +V AGQ+G T N KV K+ Sbjct: 152 GKVLKGKKMAGQHGNATVTVQNLKVVKV 179
>RK3A_ARATH (Q9SKX4) 50S ribosomal protein L3-1, chloroplast precursor| Length = 271 Score = 35.4 bits (80), Expect = 0.15 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 5/87 (5%) Frame = -3 Query: 653 DAVFQKDEMIDIIGVTKGKGYEGVVTRW----GVTRLPRKTHRGLRKVACIGAWHPARVS 486 D +F++ +++D+ G T GKG++G + R G K+HR L + P RV Sbjct: 154 DEIFKEGDLVDVAGTTIGKGFQGGIKRHHFKRGQMTHGSKSHRALGSIG--AGTTPGRVY 211 Query: 485 YTVARAGQNGYHHRTEMNK-KVYKIGK 408 G+ G RT++ K K+ K+ K Sbjct: 212 KGKKMPGRMG-GTRTKIRKLKIVKVDK 237
>RL3_COXBU (Q83ES4) 50S ribosomal protein L3| Length = 217 Score = 35.4 bits (80), Expect = 0.15 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 4/88 (4%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGAWH-P 498 E+ +D +F++ +++D+ G+T+GKG+ G V R R TH R IG P Sbjct: 98 ELKVD-IFKEGQVVDVRGLTRGKGFAGTVKRHNF-RTQDATHGNSLSHRAPGSIGQCQTP 155 Query: 497 ARVSYTVARAGQNGYHHRTEMNKKVYKI 414 RV AGQ G + T ++++ K+ Sbjct: 156 GRVWKGKKMAGQLGNVYCTVQSQEIIKV 183
>RM09_YEAST (P31334) 60S ribosomal protein L9, mitochondrial precursor (YmL9)| Length = 269 Score = 35.4 bits (80), Expect = 0.15 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%) Frame = -3 Query: 644 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW----HPARVSYTV 477 F++ + +D+ V+KGKG+ GV+ R+G L R +H G++ P RV Sbjct: 160 FKEGQYVDVRSVSKGKGFTGVMKRYGFKGL-RASHGTSIMHRHGGSYGQNQDPGRVLPGR 218 Query: 476 ARAGQNGYHHRTEMNKKVYKI 414 G G H T N KV K+ Sbjct: 219 KMPGHMGNEHVTIQNVKVLKV 239
>RL3_XANCP (Q8PC49) 50S ribosomal protein L3| Length = 216 Score = 35.4 bits (80), Expect = 0.15 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYT 480 +F+ + +D+ GVTKGKG++G + R+ R+ TH G+ P RV Sbjct: 107 IFEVGQKVDVQGVTKGKGFQGTIKRYNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPG 165 Query: 479 VARAGQNGYHHRTEMNKKVYKI 414 +G G ++ N +V K+ Sbjct: 166 KKMSGHMGAVQQSTQNLEVVKV 187
>RL3_XANAC (Q8PNS4) 50S ribosomal protein L3| Length = 216 Score = 35.4 bits (80), Expect = 0.15 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSYT 480 +F+ + +D+ GVTKGKG++G + R+ R+ TH G+ P RV Sbjct: 107 IFEVGQKVDVQGVTKGKGFQGTIKRYNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFPG 165 Query: 479 VARAGQNGYHHRTEMNKKVYKI 414 +G G ++ N +V K+ Sbjct: 166 KKMSGHMGAVQQSTQNLEVVKV 187
>RL3_MYCLE (P30762) 50S ribosomal protein L3| Length = 217 Score = 35.0 bits (79), Expect = 0.20 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 5/83 (6%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPARVSY 483 +F +D+ G +KGKG+ G + R G + + HR R + G PARV Sbjct: 105 IFADATYVDVTGTSKGKGFSGTMKRHGFRGQGASHGAQAVHR--RPGSIGGCATPARVFK 162 Query: 482 TVARAGQNGYHHRTEMNKKVYKI 414 AG+ G T N V+K+ Sbjct: 163 GTRMAGRMGNDRVTVQNLLVHKV 185
>RL3_BUCAI (P57591) 50S ribosomal protein L3| Length = 209 Score = 34.7 bits (78), Expect = 0.26 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRW 570 +F + +DI G++KGKG+ G V RW Sbjct: 100 IFNNVKKVDITGISKGKGFSGTVKRW 125
>RL3_BRAPL (Q9FA04) 50S ribosomal protein L3| Length = 218 Score = 34.7 bits (78), Expect = 0.26 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 2/86 (2%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA-CIGA-WHPAR 492 E+ +D +FQ + ID+ ++KG+G+ GV+ R P R+ A IG +PAR Sbjct: 95 ELKVD-IFQAGDFIDVSSLSKGRGFAGVMKRHNYDGGPMSHGSNFRRRAGSIGCNSYPAR 153 Query: 491 VSYTVARAGQNGYHHRTEMNKKVYKI 414 V G G T N KV +I Sbjct: 154 VWKGKGMPGHMGNTLTTIQNLKVVEI 179
>RL3_ACTAC (P94799) 50S ribosomal protein L3 (Fragment)| Length = 121 Score = 34.7 bits (78), Expect = 0.26 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 4/88 (4%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHP 498 E+ +D +F + +D+ G +KGKG++G V RW R TH +G+ P Sbjct: 7 EINVD-IFADVKKVDVTGTSKGKGFQGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQTP 64 Query: 497 ARVSYTVARAGQNGYHHRTEMNKKVYKI 414 RV AG G T + +V ++ Sbjct: 65 GRVFKGKKMAGHLGNERVTVQSLEVVRV 92
>RL3_HAEIN (P44344) 50S ribosomal protein L3| Length = 208 Score = 34.7 bits (78), Expect = 0.26 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 4/88 (4%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHP 498 E+ +D +F + +D+ G +KGKG++G V RW R TH +G+ P Sbjct: 94 EINVD-IFADVKKVDVTGTSKGKGFQGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQTP 151 Query: 497 ARVSYTVARAGQNGYHHRTEMNKKVYKI 414 RV AG G T + +V ++ Sbjct: 152 GRVFKGKKMAGHLGAERVTVQSLEVVRV 179
>RL3_CHLPN (Q9Z7Q7) 50S ribosomal protein L3| Length = 219 Score = 34.3 bits (77), Expect = 0.35 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 2/80 (2%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PARVSYTVA 474 VF+ +D+ G++KGKG++GV+ ++G P G R IG P R Sbjct: 111 VFEDVSSVDVRGISKGKGFQGVMKKFGFRGGPGSHGSGFHRHAGSIGMRSTPGRCFPGSK 170 Query: 473 RAGQNGYHHRTEMNKKVYKI 414 R G + T N +V K+ Sbjct: 171 RPSHMGAENVTVKNLEVIKV 190
>RL3_BLOFL (Q7VQE8) 50S ribosomal protein L3| Length = 219 Score = 34.3 bits (77), Expect = 0.35 Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 3/74 (4%) Frame = -3 Query: 626 IDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPARVSYTVARAGQNG 456 +D+ G++KGKG+ G V RW L R IG P +V AG G Sbjct: 108 VDVTGISKGKGFAGAVKRWNFRTQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGHLG 167 Query: 455 YHHRTEMNKKVYKI 414 Y T N V I Sbjct: 168 YEKATIQNLAVINI 181
>RL3_LACLA (Q9CDW2) 50S ribosomal protein L3| Length = 207 Score = 34.3 bits (77), Expect = 0.35 Identities = 14/38 (36%), Positives = 25/38 (65%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 552 E+ +D F +++D+ G +KGKG++G + R G +R P Sbjct: 94 EITVDT-FAAGDVVDVTGTSKGKGFQGPIKRHGQSRGP 130
>RL3_MYCPE (Q8EUB3) 50S ribosomal protein L3| Length = 310 Score = 34.3 bits (77), Expect = 0.35 Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 1/151 (0%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARA 468 +F + +D +TKGKG+ G + RW KV +G H A Sbjct: 98 IFNSGDKVDAQAITKGKGFTGAIKRWNF------------KVGPLG--HGA--------- 134 Query: 467 GQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGV-VKADYLMIK 291 GY HR + + + G GQ ++ + + ++ + +++K Sbjct: 135 ---GYPHRYQGSISFGRGGSQGQRVPKGQKMSGHYGHELVTISNLTVVSIELEKNLILVK 191 Query: 290 GCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 198 G GP +V L+ ++ S+ ++ IKL Sbjct: 192 GSVPGPVNSLVLLKTTV---KSKKQVDPIKL 219
>RL3_PSESM (Q889X1) 50S ribosomal protein L3| Length = 211 Score = 34.3 bits (77), Expect = 0.35 Identities = 10/26 (38%), Positives = 19/26 (73%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRW 570 +F +++D+ G +KGKG++G + RW Sbjct: 100 IFAAGQLVDVTGQSKGKGFQGTIKRW 125
>RL3_STAS1 (Q49ZG8) 50S ribosomal protein L3| Length = 219 Score = 33.9 bits (76), Expect = 0.45 Identities = 13/31 (41%), Positives = 21/31 (67%) Frame = -3 Query: 644 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 552 F+ ++ID+ GV+KGKG++G + R R P Sbjct: 110 FEAGDVIDVTGVSKGKGFQGAIKRHNQARGP 140
>RL3_CHRVO (Q7NQF2) 50S ribosomal protein L3| Length = 214 Score = 33.9 bits (76), Expect = 0.45 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTR--WGVTRLPRKTHRGLRKVACIG-AWHPARVSYTV 477 +F +++D+ G +KGKG+ GV+ R + R R IG A P RV Sbjct: 103 IFTVGQLVDVTGTSKGKGFSGVIKRHNFSSNRASHGNSRSHNTPGSIGQAQDPGRVFPGK 162 Query: 476 ARAGQNG 456 AGQ G Sbjct: 163 RMAGQYG 169
>RK3_TOBAC (O80360) 50S ribosomal protein L3, chloroplast precursor (Fragment)| Length = 259 Score = 33.9 bits (76), Expect = 0.45 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 3/81 (3%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH--RGLRKVACIGA-WHPARVSYTV 477 +F++ +++D+ G T GKG++G + R R + TH + R++ IGA P RV Sbjct: 144 LFKEGDLVDVSGTTIGKGFQGGIKRHNFKR-GQMTHGSKSHRQLGSIGAGTTPGRVYKGK 202 Query: 476 ARAGQNGYHHRTEMNKKVYKI 414 G+ G R K+ KI Sbjct: 203 KMPGRMGGTKRKIRKLKIVKI 223
>RL3_WOLSU (Q7M8D4) 50S ribosomal protein L3| Length = 192 Score = 33.9 bits (76), Expect = 0.45 Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Frame = -3 Query: 608 TKGKGYEGVVTRWGVTRLP-RKTHRGLRKVACIG--AWHPARVSYTVARAGQNGYHHRTE 438 TKG+G+ GV+ RW P HR R+ IG W P RV AGQ G T Sbjct: 100 TKGRGFTGVMKRWNFAGGPAAHGHRFKRRTGSIGNREW-PGRVQPGKKMAGQYGNEKVTV 158 Query: 437 MNKKV 423 N+ V Sbjct: 159 QNEIV 163
>RL3_CHLMU (Q9PJL4) 50S ribosomal protein L3| Length = 221 Score = 33.9 bits (76), Expect = 0.45 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL-RKVACIGAWH-PARVSYTVA 474 +F +D+ G++KGKG++GV+ ++G P+ G R IG P R Sbjct: 111 IFDGVSNVDVCGISKGKGFQGVMKKFGFRGGPKSHGSGFHRHAGSIGMRSTPGRCFPGSK 170 Query: 473 RAGQNGYHHRTEMNKKVYKI 414 R G T N +V K+ Sbjct: 171 RPSHMGCDRVTVKNLEVVKV 190
>RL3_PASMU (Q9CL32) 50S ribosomal protein L3| Length = 209 Score = 33.5 bits (75), Expect = 0.59 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 4/88 (4%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHP 498 E+ +D +F + +D+ G +KGKG+ G V RW R TH +G+ P Sbjct: 95 EINVD-IFADVKKVDVTGTSKGKGFAGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQTP 152 Query: 497 ARVSYTVARAGQNGYHHRTEMNKKVYKI 414 RV AG G T + +V ++ Sbjct: 153 GRVFKGKKMAGHLGNERVTVQSLEVVRV 180
>RL3_HAEDU (Q7VKD2) 50S ribosomal protein L3| Length = 208 Score = 33.5 bits (75), Expect = 0.59 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 4/88 (4%) Frame = -3 Query: 665 EVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHP 498 E+ +D +F + +D+ G +KGKG+ G V RW R TH +G+ P Sbjct: 94 EINVD-IFADVKKVDVTGTSKGKGFAGGVKRWNF-RTQDATHGNSLSHRVLGSIGQNQTP 151 Query: 497 ARVSYTVARAGQNGYHHRTEMNKKVYKI 414 RV AG G T + +V ++ Sbjct: 152 GRVFKGKKMAGHLGAERVTVQSLEVVRV 179
>RL3_CHLTR (O84533) 50S ribosomal protein L3| Length = 221 Score = 33.5 bits (75), Expect = 0.59 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 519 +F +DI G++KGKG++GV+ ++G P+ G + A Sbjct: 111 IFDGVSNVDICGISKGKGFQGVMKKFGFRGGPKSHGSGFHRHA 153
>RL3_STRAW (Q82DP5) 50S ribosomal protein L3| Length = 214 Score = 33.1 bits (74), Expect = 0.77 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 5/82 (6%) Frame = -3 Query: 644 FQKDEMIDIIGVTKGKGYEGVVTR-----WGVTRLPRKTHRGLRKVACIGAWHPARVSYT 480 F+ +D+ G +KGKG+ GV+ R G ++ HR + G P RV Sbjct: 105 FEAGVKVDVTGKSKGKGFAGVMKRHNFKGLGAGHGTQRKHRSPGSIG--GCATPGRVFKG 162 Query: 479 VARAGQNGYHHRTEMNKKVYKI 414 + AG+ G T N V+ + Sbjct: 163 LRMAGRMGNERVTTQNLTVHAV 184
>RL3_RALSO (Q8XV12) 50S ribosomal protein L3| Length = 220 Score = 33.1 bits (74), Expect = 0.77 Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 3/81 (3%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIG-AWHPARVSYTV 477 +F D+ ID+ G T GKGY G + R+ + R R IG A P RV Sbjct: 103 LFSVDQKIDVQGTTIGKGYAGTIKRYHFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGK 162 Query: 476 ARAGQNGYHHRTEMNKKVYKI 414 G G RT N + +I Sbjct: 163 RMTGHMGDVTRTVQNLVIVRI 183
>FLGH_PSEPU (Q52081) Flagellar L-ring protein precursor (Basal body L-ring| protein) Length = 231 Score = 33.1 bits (74), Expect = 0.77 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%) Frame = +3 Query: 459 ILTSPSNSVG--HPSRMPGTNTGNLAKTSVGLAGKAGDTPTCHNTF----ITLTLGYTDD 620 + +SPS S+ S+ G+ +KT +GL G TP +N F ++L GY+ D Sbjct: 68 VTSSPSRSMSATSASKNAGSQIAKTSKTDIGLTSLFGSTPNTNNPFGGGDLSLEAGYSGD 127
>RL3_XYLFA (Q9PE76) 50S ribosomal protein L3| Length = 215 Score = 33.1 bits (74), Expect = 0.77 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Frame = -3 Query: 650 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSY 483 ++F + +DI G+TKGKG++G + R R+ TH G+ P RV Sbjct: 105 SIFAVGQKVDIQGITKGKGFQGTIKRHNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFP 163 Query: 482 TVARAGQNGYHHRTEMNKKVYKI 414 +G G ++ N +V KI Sbjct: 164 GKKMSGHMGAVRQSVQNLEVVKI 186
>RL3_MYCPN (P75580) 50S ribosomal protein L3| Length = 287 Score = 32.7 bits (73), Expect = 1.0 Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 1/139 (0%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARA 468 +FQ E +D+ ++KG+G+ G + RW P GA +P R +V +A Sbjct: 101 LFQVGEYVDVSAISKGRGFTGAIKRWNFKIGPLGH----------GAGYPHRFQGSV-QA 149 Query: 467 GQNGYHHRTEMNKKVYKIGKV-GQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIK 291 G+ G ++V+K K+ G H+ T + + GF ++ +++ Sbjct: 150 GRGG-----ASAQRVFKGKKMSGHYGHEKVTVQN------LRIVGFDEANML----VLVS 194 Query: 290 GCCVGPKKRVVTLRQSLLK 234 G GP+ VV +R + K Sbjct: 195 GAIAGPEGGVVLIRTAKKK 213
>RL3_CAUCR (Q9A8V3) 50S ribosomal protein L3| Length = 255 Score = 32.7 bits (73), Expect = 1.0 Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 4/81 (4%) Frame = -3 Query: 644 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR---GLRKVACIG-AWHPARVSYTV 477 F + +DI GVT GKG+ G + RW L R TH R G P R Sbjct: 107 FVAGQKVDIQGVTVGKGFAGAMKRWNFGGL-RATHGVSVSHRSHGSTGNRQDPGRTFPGK 165 Query: 476 ARAGQNGYHHRTEMNKKVYKI 414 AG G T +N V+K+ Sbjct: 166 KMAGHLGQETVTTLNVTVWKV 186
>RL3_XYLFT (Q87E82) 50S ribosomal protein L3| Length = 215 Score = 32.7 bits (73), Expect = 1.0 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Frame = -3 Query: 650 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA----WHPARVSY 483 ++F + +DI G+TKGKG++G + R R+ TH G+ P RV Sbjct: 105 SIFAVGQKVDIQGITKGKGFQGTIKRHNF-RMGDATHGNSLSHRAPGSLGQRQTPGRVFP 163 Query: 482 TVARAGQNGYHHRTEMNKKVYKI 414 +G G ++ N +V KI Sbjct: 164 GKKMSGHMGAVKQSVQNLEVIKI 186
>RL3_PSEPK (Q88QN5) 50S ribosomal protein L3| Length = 211 Score = 32.3 bits (72), Expect = 1.3 Identities = 10/26 (38%), Positives = 18/26 (69%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRW 570 +F +++D+ G +KGKG+ G + RW Sbjct: 100 LFTAGQLVDVTGQSKGKGFAGTIKRW 125
>FLGH_PSEPK (Q88ER9) Flagellar L-ring protein precursor (Basal body L-ring| protein) Length = 231 Score = 32.3 bits (72), Expect = 1.3 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Frame = +3 Query: 450 VVSILTSPSNSVGHPSRMPGTNTGNLAKTSVGLAGKAGDTPTCHNTF----ITLTLGYTD 617 V I+T N S+ G+ +KT +GL G TP +N F ++L GY+ Sbjct: 67 VGDIITITLNERTSASKNAGSQIAKTSKTDIGLTSLFGSTPNTNNPFGGGDLSLEAGYSG 126 Query: 618 D 620 D Sbjct: 127 D 127
>RL3_YERPS (P11252) 50S ribosomal protein L3| Length = 209 Score = 32.0 bits (71), Expect = 1.7 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRW 570 +F + +D+ G +KGKG+ G V RW Sbjct: 100 IFADVKKVDVTGTSKGKGFAGTVKRW 125
>RL3_YERPE (Q8ZJA9) 50S ribosomal protein L3| Length = 209 Score = 32.0 bits (71), Expect = 1.7 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRW 570 +F + +D+ G +KGKG+ G V RW Sbjct: 100 IFADVKKVDVTGTSKGKGFAGTVKRW 125
>RL3_PHOLL (Q7MYF1) 50S ribosomal protein L3| Length = 209 Score = 32.0 bits (71), Expect = 1.7 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRW 570 +F + +D+ G +KGKG+ G V RW Sbjct: 100 IFADVKKVDVTGTSKGKGFAGTVKRW 125
>RL3_ONYPE (P60455) 50S ribosomal protein L3| Length = 157 Score = 32.0 bits (71), Expect = 1.7 Identities = 12/32 (37%), Positives = 21/32 (65%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 552 +FQ +++D+ G +KGKG+ G + R +R P Sbjct: 42 LFQVGDLVDVTGTSKGKGFAGSIKRHNQSRGP 73
>RL3_WIGBR (Q8D212) 50S ribosomal protein L3| Length = 215 Score = 32.0 bits (71), Expect = 1.7 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%) Frame = -3 Query: 626 IDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-WHPARVSYTVARAGQNG 456 ++I G++KGKG+ G + RW L R IG P +V +G G Sbjct: 107 VNITGISKGKGFSGTMKRWNFHGQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMSGHLG 166 Query: 455 YHHRTEMNKKVYKI 414 Y+ T N V KI Sbjct: 167 YNKNTVKNLFVVKI 180
>RL3_STRCO (Q9L0E0) 50S ribosomal protein L3| Length = 214 Score = 31.6 bits (70), Expect = 2.2 Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 3/80 (3%) Frame = -3 Query: 644 FQKDEMIDIIGVTKGKGYEGVVTRWGVT--RLPRKTHRGLRKVACIGAW-HPARVSYTVA 474 F+ +D+ +KGKG+ GV+ R + HR R IG P RV + Sbjct: 105 FESGVKVDVTAKSKGKGFAGVMKRHNFKGGKASHGAHRVHRMPGSIGGCATPGRVFKGMR 164 Query: 473 RAGQNGYHHRTEMNKKVYKI 414 AG+ G T N V+ + Sbjct: 165 MAGRMGNERVTTQNLTVHAV 184
>RL3_SHIFL (P60447) 50S ribosomal protein L3| Length = 209 Score = 31.6 bits (70), Expect = 2.2 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 480 +F + +D+ G +KGKG+ G V RW R TH R IG P +V Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158 Query: 479 VARAGQNGYHHRTEMNKKVYKI 414 AGQ G T + V ++ Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180
>RL3_SALTY (P60446) 50S ribosomal protein L3| Length = 209 Score = 31.6 bits (70), Expect = 2.2 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 480 +F + +D+ G +KGKG+ G V RW R TH R IG P +V Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158 Query: 479 VARAGQNGYHHRTEMNKKVYKI 414 AGQ G T + V ++ Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180
>RL3_SALTI (P60445) 50S ribosomal protein L3| Length = 209 Score = 31.6 bits (70), Expect = 2.2 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 480 +F + +D+ G +KGKG+ G V RW R TH R IG P +V Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158 Query: 479 VARAGQNGYHHRTEMNKKVYKI 414 AGQ G T + V ++ Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180
>RL3_MYCGE (P47397) 50S ribosomal protein L3| Length = 257 Score = 31.6 bits (70), Expect = 2.2 Identities = 10/26 (38%), Positives = 18/26 (69%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRW 570 +F+ E +D+ +TKG+G+ G + RW Sbjct: 101 LFKIGEYVDVTSLTKGRGFTGAIKRW 126
>RL3_ECOLI (P60438) 50S ribosomal protein L3| Length = 209 Score = 31.6 bits (70), Expect = 2.2 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 480 +F + +D+ G +KGKG+ G V RW R TH R IG P +V Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158 Query: 479 VARAGQNGYHHRTEMNKKVYKI 414 AGQ G T + V ++ Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180
>RL3_ECOL6 (P60439) 50S ribosomal protein L3| Length = 209 Score = 31.6 bits (70), Expect = 2.2 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 480 +F + +D+ G +KGKG+ G V RW R TH R IG P +V Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158 Query: 479 VARAGQNGYHHRTEMNKKVYKI 414 AGQ G T + V ++ Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180
>RL3_ECO57 (P60440) 50S ribosomal protein L3| Length = 209 Score = 31.6 bits (70), Expect = 2.2 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 480 +F + +D+ G +KGKG+ G V RW R TH R IG P +V Sbjct: 100 LFADVKKVDVTGTSKGKGFAGTVKRWNF-RTQDATHGNSLSHRVPGSIGQNQTPGKVFKG 158 Query: 479 VARAGQNGYHHRTEMNKKVYKI 414 AGQ G T + V ++ Sbjct: 159 KKMAGQMGNERVTVQSLDVVRV 180
>RL3_SHEON (Q8EK68) 50S ribosomal protein L3| Length = 212 Score = 31.6 bits (70), Expect = 2.2 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 4/82 (4%) Frame = -3 Query: 647 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL---RKVACIGA-WHPARVSYT 480 +F +D+ G +KGKG++G V RW R TH R IG P RV Sbjct: 103 IFADVAKVDVTGQSKGKGFQGGVKRWNF-RTQDMTHGNSLSHRSNGSIGQNQTPGRVFKG 161 Query: 479 VARAGQNGYHHRTEMNKKVYKI 414 +G G T N V ++ Sbjct: 162 KKMSGHMGAERVTTQNLDVVRV 183
>CY42_TRYBB (Q99396) Receptor-type adenylate cyclase GRESAG 4.2 (EC 4.6.1.1)| (ATP pyrophosphate-lyase) (Adenylyl cyclase) (Fragment) Length = 572 Score = 31.2 bits (69), Expect = 2.9 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Frame = -3 Query: 491 VSYTVARAGQNGYHHRTEMNKKVYKIGKVGQ-----ETHDASTEFDRTEKDITPMGGFPH 327 + Y G + Y + +G GQ ET+ + + +R++ D+TP+GG P Sbjct: 401 IRYDEVTKGYDYYGQTANTAARTESVGNGGQVLMTCETYHSLSTAERSQFDVTPLGGVPL 460 Query: 326 YGV 318 GV Sbjct: 461 RGV 463
>RL3_BRAJA (Q89J84) 50S ribosomal protein L3| Length = 238 Score = 30.8 bits (68), Expect = 3.8 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%) Frame = -3 Query: 662 VPIDAVFQKD-----EMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 540 +P+ A Q D + +D+ G + GKG+ G + RW L R TH Sbjct: 91 IPVGAEIQADHFVVGQFVDVTGTSVGKGFAGGMKRWNFGGL-RATH 135
>IPAC_SHIFL (P18012) Invasin ipaC (42 kDa antigen)| Length = 363 Score = 30.8 bits (68), Expect = 3.8 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +3 Query: 102 SSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 251 SS+++ L I +L+ L TA KLG + + D + +++QGLA Sbjct: 103 SSNAVSLIISVAVLLSALRTAETKLGSQLSLIAFDATKSAAENIVRQGLA 152
>IPAC_SHIDY (Q03946) Invasin ipaC (42 kDa antigen)| Length = 363 Score = 30.8 bits (68), Expect = 3.8 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +3 Query: 102 SSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 251 SS+++ L I +L+ L TA KLG + + D + +++QGLA Sbjct: 103 SSNAVSLIISVAVLLSALRTAETKLGSQLSLIAFDATKSAAENIVRQGLA 152
>ICAM5_HUMAN (Q9UMF0) Intercellular adhesion molecule 5 precursor (ICAM-5)| (Telencephalin) Length = 924 Score = 30.4 bits (67), Expect = 5.0 Identities = 16/66 (24%), Positives = 27/66 (40%) Frame = +3 Query: 156 ETAVPKLGRGVDKLELDFLQCETRGLLQQGLAEGHHTLLWPDTASLDHQVVGLHHTIVRE 335 E+ P ++ E L C RG G+ + WP+ + + G +H + Sbjct: 670 ESTCPSHQTWLEGAEASALACAARGRPSPGVRCSREGIPWPEQQRVSREDAGTYHCVATN 729 Query: 336 ATHGSD 353 A HG+D Sbjct: 730 A-HGTD 734
>RUVB_RHOBA (Q7UPG4) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 366 Score = 30.4 bits (67), Expect = 5.0 Identities = 18/87 (20%), Positives = 41/87 (47%), Gaps = 2/87 (2%) Frame = +3 Query: 78 KMTQLILRSSSSLELAIEPLL--LVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLA 251 ++ +++LR+S L + ++P ++ + P+L D+ Q +T+G ++ + Sbjct: 216 ELAEIVLRNSKKLNIEVDPTSAGVIADRSRSTPRLANNRLLWVRDYAQSKTKGNVEASVC 275 Query: 252 EGHHTLLWPDTASLDHQVVGLHHTIVR 332 E ++ D LD Q T++R Sbjct: 276 EAALDMIGIDHLGLDKQDRNYLDTLMR 302
>PHF12_MOUSE (Q5SPL2) PHD finger protein 12 (PHD factor 1) (Pf1)| Length = 1003 Score = 30.4 bits (67), Expect = 5.0 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +2 Query: 461 SDQPEQQCRTP*QDARHQYRQPCEDLCGSCGEGG 562 +D+ E++ R P +++R R D C SC EGG Sbjct: 33 TDEAEKRSRKPEKESRRSGRATNHDSCDSCKEGG 66
>RL3_PROMM (Q7V542) 50S ribosomal protein L3| Length = 218 Score = 30.4 bits (67), Expect = 5.0 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%) Frame = -3 Query: 644 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIGA-WHPARVSYTVAR 471 F+ + +D+ G T G+G+ G R G +R P + R+ GA P R+ Sbjct: 102 FEAGQKVDVSGDTMGRGFAGYQKRHGFSRGPMSHGSKNHREPGSTGAGTTPGRIYPGKRM 161 Query: 470 AGQNGYHHRTEMNKKVYKI 414 AG+ G RT + K+ Sbjct: 162 AGRYGGKKRTTRGLTILKV 180
>RL3_RHOPA (P60456) 50S ribosomal protein L3 (RRP-L3)| Length = 241 Score = 30.4 bits (67), Expect = 5.0 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%) Frame = -3 Query: 662 VPIDAVFQKD-----EMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 540 +P+ A Q D + +D+ G + GKG+ G + RW L R TH Sbjct: 91 LPVGAEIQADHFVVGQFVDVTGTSTGKGFAGGMKRWNFGGL-RATH 135
>RL3_PLARO (P72233) 50S ribosomal protein L3 (Fragment)| Length = 140 Score = 30.4 bits (67), Expect = 5.0 Identities = 11/26 (42%), Positives = 18/26 (69%) Frame = -3 Query: 644 FQKDEMIDIIGVTKGKGYEGVVTRWG 567 F+ + +D+ G +KGKG+ GV+ R G Sbjct: 105 FEAGQFVDVTGKSKGKGFAGVMKRHG 130
>HEM3_DESVH (Q72AV0) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 315 Score = 30.4 bits (67), Expect = 5.0 Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 4/65 (6%) Frame = +3 Query: 96 LRSSSSLELAIEPLL----LVGGLETAVPKLGRGVDKLELDFLQCETRGLLQQGLAEGHH 263 LR S L LA+ P L L G ++T + KL G E D + T GL + GLA HH Sbjct: 129 LRRQSQL-LALRPDLDIISLRGNVDTRLRKLMDG----EFDAIVMATAGLKRLGLAAPHH 183 Query: 264 TLLWP 278 +L P Sbjct: 184 EVLAP 188
>RL3_RHOBA (Q7UN20) 50S ribosomal protein L3| Length = 228 Score = 30.0 bits (66), Expect = 6.5 Identities = 34/139 (24%), Positives = 51/139 (36%), Gaps = 5/139 (3%) Frame = -3 Query: 644 FQKDEMIDIIGVTKGKGYEGVVTRWG-----VTRLPRKTHRGLRKVACIGAWHPARVSYT 480 F + +DI G +KG+G+ GV+ R T +K HR + P+R Sbjct: 119 FNDVKKVDITGTSKGRGFAGVMKRHNFAGQRATHGVKKCHRHAGGTGMSAS--PSRTFKG 176 Query: 479 VARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYL 300 AGQ G T N +V ++ DA + L Sbjct: 177 KRMAGQYGNAKVTTRNLEVVRV--------DAEN-----------------------NLL 205 Query: 299 MIKGCCVGPKKRVVTLRQS 243 MI+G GP V++RQ+ Sbjct: 206 MIRGAVPGPNGGFVSIRQT 224
>POLR_OYMV (P20127) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1776 Score = 30.0 bits (66), Expect = 6.5 Identities = 18/85 (21%), Positives = 35/85 (41%) Frame = +1 Query: 190 TNLSLISSSARREVCFSRDWRRVTTRFFGPTQHPLIIR*SAFTTP**GKPPMGVMSFSVL 369 T +++S+++R + DWR R F +QH V Sbjct: 1400 TQATIVSNASRSDP----DWRYTVVRIFAKSQH------------------------KVN 1431 Query: 370 SNSVEASWVSCPTLPILYTFLFISV 444 S+ SW +C TL +++ F+ +++ Sbjct: 1432 DGSIFGSWKACQTLALMHDFVILTL 1456
>BPA1_MOUSE (Q91ZU6) Bullous pemphigoid antigen 1, isoforms 1/2/3/4 (BPA)| (Hemidesmosomal plaque protein) (Dystonia musculorum protein) (Dystonin) Length = 7389 Score = 30.0 bits (66), Expect = 6.5 Identities = 18/55 (32%), Positives = 33/55 (60%) Frame = +3 Query: 69 RFDKMTQLILRSSSSLELAIEPLLLVGGLETAVPKLGRGVDKLELDFLQCETRGL 233 R+ +T+L + +LE A++ L G L++ +L +DK+E++ L ET+GL Sbjct: 5516 RYKDITKLSADVAKTLEHALQ---LAGQLQSMHKELCNWLDKVEVELLSYETQGL 5567
>PHF12_HUMAN (Q96QT6) PHD finger protein 12 (PHD factor 1) (Pf1)| Length = 1004 Score = 29.6 bits (65), Expect = 8.5 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +2 Query: 461 SDQPEQQCRTP*QDARHQYRQPCEDLCGSCGEGG 562 +D+ E++ R P ++ R R D C SC EGG Sbjct: 33 TDEAEKRSRKPEKEPRRSGRATNHDSCDSCKEGG 66
>RUVB_ENTFA (Q839T5) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 338 Score = 29.6 bits (65), Expect = 8.5 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 5/86 (5%) Frame = +3 Query: 57 VSHVRF---DKMTQLILRSSSSLELAI--EPLLLVGGLETAVPKLGRGVDKLELDFLQCE 221 +SH+ + + +++LRS+ + I E + P++ + K DF Q + Sbjct: 178 ISHMEYYQEQDLKEIVLRSADIFQTEIFEEGAFEIARRSRGTPRIANRLLKRVRDFAQVQ 237 Query: 222 TRGLLQQGLAEGHHTLLWPDTASLDH 299 + G + + +A+ TLL D LD+ Sbjct: 238 SDGKIDRAIADKALTLLQVDHQGLDY 263
>RK3_ODOSI (P49569) Chloroplast 50S ribosomal protein L3| Length = 196 Score = 29.6 bits (65), Expect = 8.5 Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 4/83 (4%) Frame = -3 Query: 632 EMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWHPARVSYTVARAG 465 + ID+ G + GKG+ G+ R TR P K HR + P RV AG Sbjct: 95 QFIDVTGKSSGKGFSGLQKRHNFTRGPMTHGSKNHRAPGSIGM--GTTPGRVLPGKKMAG 152 Query: 464 QNGYHHRTEMNKKVYKIGKVGQE 396 Q G ++ KK+ I G E Sbjct: 153 QLG--NKVTKTKKLKIIQVNGNE 173 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,823,250 Number of Sequences: 219361 Number of extensions: 2258747 Number of successful extensions: 6873 Number of sequences better than 10.0: 193 Number of HSP's better than 10.0 without gapping: 6513 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6794 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6427774254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
