| Clone Name | rbags7k12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | PIP27_ORYSA (Q651D5) Probable aquaporin PIP2.7 (Plasma membrane ... | 32 | 1.6 | 2 | YRHG_BACSU (O05399) Hypothetical transport protein yrhG | 32 | 1.6 | 3 | HELS_SULSO (Q97VY9) Putative ski2-type helicase (EC 3.6.1.-) | 31 | 3.6 | 4 | AUS1_YEAST (Q08409) ATP-dependent permease AUS1 | 31 | 3.6 | 5 | LEE1_YEAST (Q02799) Zinc finger protein LEE1 | 31 | 4.7 | 6 | YEB6_YEAST (P39997) Hypothetical 57.4 kDa protein in PMP2-VAC8 i... | 30 | 8.0 |
|---|
>PIP27_ORYSA (Q651D5) Probable aquaporin PIP2.7 (Plasma membrane intrinsic| protein 2.7) (OsPIP2.7) Length = 290 Score = 32.3 bits (72), Expect = 1.6 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Frame = -1 Query: 533 GGAYALIPYFVLWKPPP-PAIDEDEIGQWPL-KFLESKITAGVIF 405 G A A PY W PPP P +D E+G+W L + L ++ A +IF Sbjct: 15 GAAAAKAPY---WDPPPAPLLDTSELGKWSLYRALIAEFMATLIF 56
>YRHG_BACSU (O05399) Hypothetical transport protein yrhG| Length = 266 Score = 32.3 bits (72), Expect = 1.6 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Frame = -1 Query: 578 KSKIPVWPFLVLSCIGGAYALIPYFVLWKPPPPAIDEDEIGQWPLKFLE-SKITAGVIFA 402 K K+P+ LVL +GGA+ + Y +D IG P ++ S + +F Sbjct: 20 KIKLPLPSLLVLGFLGGAFIALGYL---------LDIRVIGDLPKEWGSLSSLIGAAVFP 70 Query: 401 VGLGLIIFAG 372 VGL L++ AG Sbjct: 71 VGLILVVLAG 80
>HELS_SULSO (Q97VY9) Putative ski2-type helicase (EC 3.6.1.-)| Length = 708 Score = 31.2 bits (69), Expect = 3.6 Identities = 17/55 (30%), Positives = 24/55 (43%) Frame = +3 Query: 192 RHK*QWQNPRTIFPSS*CHIIVDPKRREGREQSKIKTRGMNKLALSKVLKKFPPI 356 RH+ W N F H + DP+R E I+ + N LALS + + I Sbjct: 130 RHRPDWLNEANYFVLDELHYLNDPERGPVVESVTIRAKRRNLLALSATISNYKQI 184
>AUS1_YEAST (Q08409) ATP-dependent permease AUS1| Length = 1394 Score = 31.2 bits (69), Expect = 3.6 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 8/43 (18%) Frame = +1 Query: 37 SSYLYNLHMAKIDQWLHSSYFRD-------SSLSDD-EEVAPS 141 + Y YN DQW HSSY+R+ SS+ D +EV PS Sbjct: 315 TKYTYNSDFDLYDQWKHSSYYRNIKQQIQGSSIDDSIKEVDPS 357
>LEE1_YEAST (Q02799) Zinc finger protein LEE1| Length = 301 Score = 30.8 bits (68), Expect = 4.7 Identities = 18/53 (33%), Positives = 26/53 (49%) Frame = +1 Query: 316 NLLSLKY*KNSRQSSPPALPAKIISPRPTAKITPAVILDSRNFNGHCPISSSS 474 N S +Y S Q SP AL + SP ++ ++ N N + P+SSSS Sbjct: 197 NYFSSQYLMYSPQKSPEALYTEFFSPPSSSSSYINYSYNNSNINAYSPVSSSS 249
>YEB6_YEAST (P39997) Hypothetical 57.4 kDa protein in PMP2-VAC8 intergenic| region Length = 493 Score = 30.0 bits (66), Expect = 8.0 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 4/73 (5%) Frame = +3 Query: 447 WPLSNFIFINGRWRRFPQNKVR----NQRICSSNA*KHQEWPDWDLAF*TSSSGKKQHAV 614 +P+ + I N W F ++ R + RI S+ A P W L T S G+ + A Sbjct: 139 YPIEHGIVSNIFWDNFTSSEFRPNNLDARIWSNTAD-----PIWQLLQ-TESQGEYKVAT 192 Query: 615 HQWPDSHYVPQRH 653 H WP S V + H Sbjct: 193 HMWPGSEVVYEDH 205 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 111,417,404 Number of Sequences: 219361 Number of extensions: 2438889 Number of successful extensions: 6849 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 6435 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6844 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 7902193040 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)