ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags7j22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MDAR2_ARATH (Q9LK94) Probable monodehydroascorbate reductase, cy... 134 3e-31
2MDAR_PEA (Q40977) Monodehydroascorbate reductase (EC 1.6.5.4) (M... 110 4e-24
3MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cy... 109 5e-24
4MDAR1_ARATH (Q9SR59) Probable monodehydroascorbate reductase, cy... 102 1e-21
5MDAR4_ARATH (Q93WJ8) Probable monodehydroascorbate reductase, cy... 100 5e-21
6MDAR_LYCES (Q43497) Monodehydroascorbate reductase (EC 1.6.5.4) ... 96 6e-20
7MDARS_CUCSA (Q42711) Monodehydroascorbate reductase, seedling is... 94 3e-19
8MDARF_CUCSA (P83966) Monodehydroascorbate reductase, fruit isozy... 76 8e-14
9MDARP_ARATH (P92947) Monodehydroascorbate reductase, chloroplast... 69 1e-11
10WSC2_YEAST (P53832) Cell wall integrity and stress response comp... 33 0.47
11CFAH_MOUSE (P06909) Complement factor H precursor (Protein beta-... 33 0.81
12HIC1_MOUSE (Q9R1Y5) Hypermethylated in cancer 1 protein (Hic-1) 32 1.1
13YAMP_RHOCA (P14172) Hypothetical 28.2 kDa protein in ampR 5'region 32 1.8
14CAPS1_HUMAN (Q9ULU8) Calcium-dependent secretion activator 1 (Ca... 31 2.3
15PININ_BOVIN (P79122) Pinin 30 4.0
16VE2_HPV28 (P50771) Regulatory protein E2 30 4.0
17COBQ_METTH (O26880) Probable cobyric acid synthase 30 4.0
18CAPS1_RAT (Q62717) Calcium-dependent secretion activator 1 (Calc... 30 6.8
19CAPS1_MOUSE (Q80TJ1) Calcium-dependent secretion activator 1 (Ca... 30 6.8
20DLL4_MOUSE (Q9JI71) Delta-like protein 4 precursor (Drosophila D... 30 6.8
21ATPG_BARQU (Q6FYM2) ATP synthase gamma chain (EC 3.6.3.14) (ATP ... 30 6.8
22SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (S... 29 8.9

>MDAR2_ARATH (Q9LK94) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 2 (EC 1.6.5.4) (MDAR 2)
          Length = 488

 Score =  134 bits (336), Expect = 3e-31
 Identities = 66/143 (46%), Positives = 93/143 (65%), Gaps = 15/143 (10%)
 Frame = -1

Query: 592 DVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSPRFGAYWVSKGQITGAFLEGGNR 413
           D DYLPFFYSRVF  SWQFYGD  G+V+H+G++  +   FGAYWV KG + G+FLEGG +
Sbjct: 336 DFDYLPFFYSRVFAFSWQFYGDPTGDVVHFGEY-EDGKSFGAYWVKKGHLVGSFLEGGTK 394

Query: 412 DDYEALSVVVRRKTKAS-DMSELERQGLAFA---IQESK----KEVP-------DSGVTL 278
           ++YE +S   + K   + D+ ELER+GL FA   + + K    K++P        + V +
Sbjct: 395 EEYETISKATQLKPAVTIDLEELEREGLGFAHTVVSQQKVPEVKDIPSAEMVKQSASVVM 454

Query: 277 GEKPTFVWYATAGVVAAVSISAF 209
            +KP +VW+A  GVV A S++AF
Sbjct: 455 IKKPLYVWHAATGVVVAASVAAF 477



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>MDAR_PEA (Q40977) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)|
           (Ascorbate free radical reductase) (AFR reductase)
          Length = 433

 Score =  110 bits (274), Expect = 4e-24
 Identities = 48/92 (52%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
 Frame = -1

Query: 592 DVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDF--TSNSPRFGAYWVSKGQITGAFLEGG 419
           + DYLP+FYSR F LSWQFYGDNVGE + +GD    S+ P+FG YW+ +G++ GAFLEGG
Sbjct: 339 EYDYLPYFYSRSFDLSWQFYGDNVGETVLFGDNDPASSKPKFGTYWIKEGKVVGAFLEGG 398

Query: 418 NRDDYEALSVVVRRKTKASDMSELERQGLAFA 323
             D+ +A++ V R K    D+++L  +GL+FA
Sbjct: 399 TPDENKAIAKVARAKPAVEDVNQLAEEGLSFA 430



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>MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 3 (EC 1.6.5.4) (MDAR 3)
          Length = 434

 Score =  109 bits (273), Expect = 5e-24
 Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 2/92 (2%)
 Frame = -1

Query: 592 DVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSP--RFGAYWVSKGQITGAFLEGG 419
           + DYLPFFYSR F LSWQFYGDNVG+ + +GD   ++P  RFGAYWV  G++ GAF+EGG
Sbjct: 340 EYDYLPFFYSRSFDLSWQFYGDNVGDSVLFGDSNPSNPKPRFGAYWVQGGKVVGAFMEGG 399

Query: 418 NRDDYEALSVVVRRKTKASDMSELERQGLAFA 323
           + D+ +AL+ V + +  A  + EL +QG++FA
Sbjct: 400 SGDENKALAKVAKARPSAESLDELVKQGISFA 431



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>MDAR1_ARATH (Q9SR59) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 1 (EC 1.6.5.4) (MDAR 1)
          Length = 441

 Score =  102 bits (253), Expect = 1e-21
 Identities = 44/92 (47%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
 Frame = -1

Query: 592 DVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNS--PRFGAYWVSKGQITGAFLEGG 419
           D DYLP+FYSR F LSW+FYG+NVGE + +GD    S  P+FG YWV  G++ G FLEGG
Sbjct: 342 DYDYLPYFYSRFFKLSWEFYGENVGESVLFGDNDPKSPKPKFGTYWVKDGKVVGVFLEGG 401

Query: 418 NRDDYEALSVVVRRKTKASDMSELERQGLAFA 323
            +++++A++ V R +     +  L  +GL+FA
Sbjct: 402 TQEEHKAIAKVARAQPSVESLDVLSEEGLSFA 433



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>MDAR4_ARATH (Q93WJ8) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 4 (EC 1.6.5.4) (MDAR 4)
          Length = 435

 Score = 99.8 bits (247), Expect = 5e-21
 Identities = 43/92 (46%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
 Frame = -1

Query: 592 DVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNS--PRFGAYWVSKGQITGAFLEGG 419
           + DYLP+FYSR F LSWQFYGDNVGE + +GD    S  P+FG+YW+ + ++ GAFLEGG
Sbjct: 341 EYDYLPYFYSRAFDLSWQFYGDNVGESVLFGDNDPESPKPKFGSYWIKERKVVGAFLEGG 400

Query: 418 NRDDYEALSVVVRRKTKASDMSELERQGLAFA 323
           + ++  A++ + R +     +  L ++GL+FA
Sbjct: 401 SPEENNAIAKLARAQPSVESLEVLSKEGLSFA 432



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>MDAR_LYCES (Q43497) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)|
           (Ascorbate free radical reductase) (AFR reductase)
          Length = 433

 Score = 96.3 bits (238), Expect = 6e-20
 Identities = 44/92 (47%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
 Frame = -1

Query: 592 DVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSP--RFGAYWVSKGQITGAFLEGG 419
           + DYLP+FYSR F LSWQFYGDNVGE + +GD   NS   +FG YW+  G+I GAFLE G
Sbjct: 340 EYDYLPYFYSRAFDLSWQFYGDNVGETVLFGDADPNSATHKFGQYWIKDGKIVGAFLESG 399

Query: 418 NRDDYEALSVVVRRKTKASDMSELERQGLAFA 323
           + ++ +A++ V + +  A+ + +L ++G++FA
Sbjct: 400 SPEENKAIAKVAKVQPPAT-LDQLAQEGISFA 430



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>MDARS_CUCSA (Q42711) Monodehydroascorbate reductase, seedling isozyme (EC|
           1.6.5.4) (MDAR seedling) (Ascorbate free radical
           reductase seedling) (AFR reductase seedling)
          Length = 434

 Score = 94.0 bits (232), Expect = 3e-19
 Identities = 41/92 (44%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
 Frame = -1

Query: 592 DVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSP--RFGAYWVSKGQITGAFLEGG 419
           + DYLP+FYSR F LSWQFYGDNVG+ + +GD + +S   +FG+YW+  G++ GAFLE G
Sbjct: 340 EYDYLPYFYSRSFDLSWQFYGDNVGDAVLFGDNSPDSATHKFGSYWIKDGKVVGAFLESG 399

Query: 418 NRDDYEALSVVVRRKTKASDMSELERQGLAFA 323
           + ++ +A++ V R +        L ++G++FA
Sbjct: 400 SPEENKAIAKVARIQPSVESSDLLLKEGISFA 431



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>MDARF_CUCSA (P83966) Monodehydroascorbate reductase, fruit isozyme (EC 1.6.5.4)|
           (MDAR fruit) (Ascorbate free radical reductase fruit)
           (AFR reductase fruit) (Fragments)
          Length = 166

 Score = 75.9 bits (185), Expect = 8e-14
 Identities = 34/68 (50%), Positives = 44/68 (64%)
 Frame = -1

Query: 592 DVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSPRFGAYWVSKGQITGAFLEGGNR 413
           + DYLP+FYSR F L+WQFYGDNVGE + + D       FG YW+   ++ G FLEGG  
Sbjct: 96  EYDYLPYFYSRTFNLAWQFYGDNVGETVLFPD------NFGTYWI---KVVGVFLEGGTP 146

Query: 412 DDYEALSV 389
           D+Y+   V
Sbjct: 147 DEYKVARV 154



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>MDARP_ARATH (P92947) Monodehydroascorbate reductase, chloroplast precursor (EC|
           1.6.5.4) (MDAR)
          Length = 493

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
 Frame = -1

Query: 586 DYLPFFYSRVFTLS-------WQFYGDNVGEVIHYGDFTSNSPRFGAYWVSKGQITGAFL 428
           DYLP+FYSRVF          WQF+GDNVGE +  G+F    P+   +W+  G++ G  +
Sbjct: 392 DYLPYFYSRVFEYEGSPRKVWWQFFGDNVGETVEVGNF---DPKIATFWIESGRLKGVLV 448

Query: 427 EGGNRDDYEALSVVVRR-----KTKASDMSELE 344
           E G+ ++++ L  + R      K K +  S +E
Sbjct: 449 ESGSPEEFQLLPKLARSQPLVDKAKLASASSVE 481



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>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2|
           precursor
          Length = 503

 Score = 33.5 bits (75), Expect = 0.47
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = -2

Query: 591 TSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVRARSRARSWKVGTG 412
           TS T  +S+  S+    +S  + SE   T ATS +T   S+ T +    S   S  +GT 
Sbjct: 202 TSSTTSTSSSPSTTSSSTSASSSSETSSTQATSSSTTSTSSSTSTATVTSTPSSTSIGTS 261

Query: 411 T--TTR 400
           T  TTR
Sbjct: 262 THYTTR 267



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>CFAH_MOUSE (P06909) Complement factor H precursor (Protein beta-1-H)|
          Length = 1234

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +1

Query: 295 QAPLSCFPGWQTLGLVFQVQTCPRPWFYAGQPPTMPRSRPGSHLPGTRP 441
           QA   C PG++TLG +  V+ C    + A  P  + R +P  H PG  P
Sbjct: 47  QATYKCRPGYRTLGTI--VKVCKNGKWVASNPSRICRKKPCGH-PGDTP 92



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>HIC1_MOUSE (Q9R1Y5) Hypermethylated in cancer 1 protein (Hic-1)|
          Length = 892

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 27/92 (29%), Positives = 33/92 (35%), Gaps = 5/92 (5%)
 Frame = -2

Query: 351 NLKDKA*RLPSRKARKRCLTAGLPSAKSPPSYGMQRQGSLRQCRSPRSVIGTAGSAAGGE 172
           NL+D      +    + C     P+A SP      R G    CR     I   G   G E
Sbjct: 66  NLQDLLSSASASLLAQVCARGRSPAAHSPRVAARWRHGRGSVCRFGPLQIRVCGKRGGAE 125

Query: 171 TR-----DRFAGGWDKLLEGRRKIYCLHTVTW 91
           TR     D  A   D+   GRR  +C H   W
Sbjct: 126 TRPGRGEDGPARQTDRGPGGRRAAHCSHVPPW 157



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>YAMP_RHOCA (P14172) Hypothetical 28.2 kDa protein in ampR 5'region|
          Length = 260

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 20/62 (32%), Positives = 29/62 (46%)
 Frame = -2

Query: 396 CRWLSGVKPRPRTCLNLKDKA*RLPSRKARKRCLTAGLPSAKSPPSYGMQRQGSLRQCRS 217
           CR ++ +KP+    +   D A + P  +  K  +  G P     PS  + RQGSL  C  
Sbjct: 155 CRLMAAIKPKYTVRMTSCDVASQAPLAQILKGMVPCGSPL----PSCRVSRQGSLSACPW 210

Query: 216 PR 211
           PR
Sbjct: 211 PR 212



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>CAPS1_HUMAN (Q9ULU8) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1)
          Length = 1353

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -3

Query: 233 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGINCWK 129
           C   DL+++L VR + PQ +K    L A G N WK
Sbjct: 503 CPDQDLKIKLAVRMDKPQNMKHSGYLWAIGKNVWK 537



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>PININ_BOVIN (P79122) Pinin|
          Length = 703

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 30/107 (28%), Positives = 49/107 (45%)
 Frame = -2

Query: 591 TSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVRARSRARSWKVGTG 412
           +S +  SS+  SS   GSS+   S    +T+ S +    S+ T S  +RSR+R    G  
Sbjct: 596 SSSSSTSSSSGSSSSSGSSSSRTSSSSSSTSGSSSRDSSSSTTSSSESRSRSRG--RGHN 653

Query: 411 TTTRHCRWLSGVKPRPRTCLNLKDKA*RLPSRKARKRCLTAGLPSAK 271
              +H R +   K R  + L    K+ +  S +  K   ++G+P  K
Sbjct: 654 RDRKHRRSVDR-KRRDASGLERSHKSAKGGSSRDAKAVSSSGMPRFK 699



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>VE2_HPV28 (P50771) Regulatory protein E2|
          Length = 376

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -2

Query: 141 KLLEGRRKIYCLHTVTWRKPCTNLYESVIVASCVNKYRNLIIYCST 4
           +L +G+RK+YC  + TWR  C +  ++  V      Y     + ST
Sbjct: 313 RLHKGKRKLYCKTSSTWRWSCESENQAAFVTIWYTSYSQRNEFLST 358



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>COBQ_METTH (O26880) Probable cobyric acid synthase|
          Length = 504

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = -1

Query: 424 GGNRDDYEALSVVVRRKTKASDMSELERQGLAFAIQESKKEVPDSGVTLG 275
           G + DD +A+ +   R T  SD+  LE  G A  I++  +E+P  G+  G
Sbjct: 286 GDSLDDLDAIIIPGTRNT-ISDLIHLEENGFADEIRDLSREIPVFGICGG 334



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>CAPS1_RAT (Q62717) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1) (rCAPS)
          Length = 1289

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -3

Query: 233 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGINCWK 129
           C   DL+++L VR + PQ +K    L   G N WK
Sbjct: 501 CPDQDLKIKLAVRMDKPQNMKHSGYLWTIGKNVWK 535



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>CAPS1_MOUSE (Q80TJ1) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1)
          Length = 1355

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -3

Query: 233 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGINCWK 129
           C   DL+++L VR + PQ +K    L   G N WK
Sbjct: 501 CPDQDLKIKLAVRMDKPQNMKHSGYLWTIGKNVWK 535



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>DLL4_MOUSE (Q9JI71) Delta-like protein 4 precursor (Drosophila Delta homolog|
           4)
          Length = 686

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
 Frame = -2

Query: 582 TCHSSTQESSH---CPGSSTGTMSEK*FTTATSQATARGSAHTGSVRARSRARSWKVGTG 412
           +C    Q SS+   CP + TG+  EK     TS   A G    G    R  +R+ +   G
Sbjct: 377 SCRERNQGSSYACECPPNFTGSNCEKKVDRCTSNPCANG----GQCLNRGPSRTCRCRPG 432

Query: 411 TTTRHC 394
            T  HC
Sbjct: 433 FTGTHC 438



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>ATPG_BARQU (Q6FYM2) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1|
           sector gamma subunit)
          Length = 303

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -3

Query: 290 RGYPRRKAHLRMVCNG-RGRCGSVDLRVRLLVRQEAPQVVKPG 165
           RG  R   HL +VC   RG CG+ ++++    RQ+   ++  G
Sbjct: 70  RGTGRNDVHLLVVCTAERGLCGAFNMQIARRARQQIKALLSAG 112



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>SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (Suppressor of|
           white-apricot homolog 2)
          Length = 659

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = -2

Query: 558 SSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVRARSRARSWKVGTGTTTRHCR 391
           SS    S++ T S +  + ++S++   G  +     ARSR+RSW      + R+ R
Sbjct: 364 SSSSSSSASRTSSSRSSSRSSSRSRRGGGYYRSGRHARSRSRSWSRSRSRSRRYSR 419


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,789,806
Number of Sequences: 219361
Number of extensions: 2274619
Number of successful extensions: 6851
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 6499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6834
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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