ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags7j20 |
|---|---|
| Clone Library Name | barley_pub |
>CUGB1_MOUSE (P28659) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)| (RNA-binding protein BRUNOL-2) (Deadenylation factor CUG-BP) (Deadenylation factor EDEN-BP) (Brain protein F41) Length = 486 Score = 114 bits (284), Expect = 4e-25 Identities = 53/72 (73%), Positives = 57/72 (79%) Frame = -3 Query: 518 QLEGPPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPA 339 Q EGP GANLFIYH+PQEFGDQDL F FG V+SAKVF+DK T SKCFGFVSYD+P Sbjct: 394 QKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPV 453 Query: 338 PAQAAISMMNGF 303 AQAAI MNGF Sbjct: 454 SAQAAIQSMNGF 465
>CUGB1_HUMAN (Q92879) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)| (RNA-binding protein BRUNOL-2) (Deadenylation factor CUG-BP) (50 kDa Nuclear polyadenylated RNA-binding protein) (EDEN-BP) Length = 486 Score = 114 bits (284), Expect = 4e-25 Identities = 53/72 (73%), Positives = 57/72 (79%) Frame = -3 Query: 518 QLEGPPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPA 339 Q EGP GANLFIYH+PQEFGDQDL F FG V+SAKVF+DK T SKCFGFVSYD+P Sbjct: 394 QKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPV 453 Query: 338 PAQAAISMMNGF 303 AQAAI MNGF Sbjct: 454 SAQAAIQSMNGF 465 Score = 30.8 bits (68), Expect = 4.4 Identities = 19/61 (31%), Positives = 33/61 (54%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LFI I ++ + D+ F SFG++ ++ + G S+ FV++ + A AQ AI M Sbjct: 110 LFIGMISKKCTENDIRVMFSSFGQIEECRI-LRGPDGLSRGCAFVTFTTRAMAQTAIKAM 168 Query: 311 N 309 + Sbjct: 169 H 169
>RBMS1_MOUSE (Q91W59) RNA-binding motif, single-stranded-interacting protein 1| (Single-stranded DNA-binding protein MSSP-1) Length = 403 Score = 60.5 bits (145), Expect = 5e-09 Identities = 28/61 (45%), Positives = 39/61 (63%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 NL+I +P DQDL Q +G+++S K +DKAT K +GFV +DSPA AQ A+S Sbjct: 63 NLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSA 122 Query: 314 M 312 + Sbjct: 123 L 123 Score = 43.5 bits (101), Expect = 7e-04 Identities = 22/63 (34%), Positives = 37/63 (58%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 NL+I ++P +Q+L + + FG+V+S +V D ++GAS+ GF +S +A I Sbjct: 142 NLYISNLPLSMDEQELENMLKPFGQVISTRVLRD-SSGASRGVGFARMESTEKCEAVIGH 200 Query: 314 MNG 306 NG Sbjct: 201 FNG 203
>RBMS1_HUMAN (P29558) RNA-binding motif, single-stranded-interacting protein 1| (Single-stranded DNA-binding protein MSSP-1) (Suppressor of CDC2 with RNA-binding motif 2) Length = 406 Score = 58.9 bits (141), Expect = 2e-08 Identities = 27/61 (44%), Positives = 38/61 (62%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 NL+I +P DQDL Q +G+++S K +DK T K +GFV +DSPA AQ A+S Sbjct: 63 NLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVSA 122 Query: 314 M 312 + Sbjct: 123 L 123 Score = 41.6 bits (96), Expect = 0.003 Identities = 20/63 (31%), Positives = 36/63 (57%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 NL+I ++P +Q+L + + FG+V+S ++ D ++G S+ GF +S +A I Sbjct: 142 NLYISNLPLSMDEQELENMLKPFGQVISTRILRD-SSGTSRGVGFARMESTEKCEAVIGH 200 Query: 314 MNG 306 NG Sbjct: 201 FNG 203
>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 653 Score = 54.3 bits (129), Expect = 4e-07 Identities = 28/64 (43%), Positives = 38/64 (59%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G NLFI ++ E D+ L F +FG + SAK+ D+ G SK FGFV Y +P A A+ Sbjct: 363 GVNLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDE-QGKSKGFGFVCYTTPEEANKAV 421 Query: 320 SMMN 309 + MN Sbjct: 422 TEMN 425 Score = 48.1 bits (113), Expect = 3e-05 Identities = 26/63 (41%), Positives = 39/63 (61%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+FI ++ ++ L F +FG++LS KV VD+ G +K +GFV +DS A AAI Sbjct: 169 NVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDE-LGNAKGYGFVHFDSVESANAAIEH 227 Query: 314 MNG 306 +NG Sbjct: 228 VNG 230 Score = 34.7 bits (78), Expect = 0.31 Identities = 18/62 (29%), Positives = 33/62 (53%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N++I ++ E +Q+ + F FG + S + D+ + FGFV+Y + AQ A+ Sbjct: 262 NVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQ-NDKPRGFGFVNYANHECAQKAVDE 320 Query: 314 MN 309 +N Sbjct: 321 LN 322
>ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)| Length = 367 Score = 53.9 bits (128), Expect = 5e-07 Identities = 20/64 (31%), Positives = 41/64 (64%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 ANL++ +P+ +++ F +GR++++++ +D+ATG S+ GF+ +D A+ AI Sbjct: 125 ANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIK 184 Query: 317 MMNG 306 +NG Sbjct: 185 GLNG 188 Score = 50.1 bits (118), Expect = 7e-06 Identities = 26/80 (32%), Positives = 37/80 (46%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 NL + ++PQ + F S G + S K+ DK TG S +GFV+Y P A AI+ Sbjct: 40 NLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINT 99 Query: 314 MNGFXXXXXXXXXXXKRDNS 255 +NG R +S Sbjct: 100 LNGLKLQTKTIKVSYARPSS 119 Score = 41.6 bits (96), Expect = 0.003 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Frame = -3 Query: 509 GPPGAN--LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAP 336 G GA +F+Y++ E + L F FG V + KV D T K FGFV+ + Sbjct: 278 GAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDE 337 Query: 335 AQAAISMMNGF 303 A AI+ +NG+ Sbjct: 338 AAMAIASLNGY 348
>PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) Length = 660 Score = 53.9 bits (128), Expect = 5e-07 Identities = 25/67 (37%), Positives = 42/67 (62%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 P N+++ ++P+E G+ +L F FG + SA V D++ G S+CFGFV+++ A + Sbjct: 226 PRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQS-GNSRCFGFVNFECTEAAAS 284 Query: 326 AISMMNG 306 A+ MNG Sbjct: 285 AVEKMNG 291 Score = 52.4 bits (124), Expect = 1e-06 Identities = 27/71 (38%), Positives = 41/71 (57%) Frame = -3 Query: 518 QLEGPPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPA 339 + E GANL++ ++ D+ L F +G V S+KV ++ G S+ FGFV+Y +P Sbjct: 325 RFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQ-GMSRGFGFVAYSNPE 383 Query: 338 PAQAAISMMNG 306 A A+S MNG Sbjct: 384 EALRALSEMNG 394 Score = 52.0 bits (123), Expect = 2e-06 Identities = 27/63 (42%), Positives = 38/63 (60%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+FI ++ ++ L F SFG +LS KV +D TG SK +GFV ++ AQAAI Sbjct: 137 NIFIKNLDASIDNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQAAIDK 195 Query: 314 MNG 306 +NG Sbjct: 196 LNG 198
>ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 373 Score = 53.5 bits (127), Expect = 6e-07 Identities = 21/64 (32%), Positives = 40/64 (62%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 ANL++ +P+ ++L F +GR++++++ VD+ TG S+ GF+ +D A+ AI Sbjct: 125 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIK 184 Query: 317 MMNG 306 +NG Sbjct: 185 GLNG 188 Score = 51.6 bits (122), Expect = 2e-06 Identities = 26/80 (32%), Positives = 39/80 (48%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 NL + ++PQ ++ F S G + S K+ DK TG S +GFV+Y P A+ AI+ Sbjct: 40 NLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 99 Query: 314 MNGFXXXXXXXXXXXKRDNS 255 +NG R +S Sbjct: 100 LNGLRLQTKTIKVSYARPSS 119 Score = 38.5 bits (88), Expect = 0.021 Identities = 21/63 (33%), Positives = 33/63 (52%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 +F+Y++ + + L F FG V + KV D T K FGFV+ + A AI+ + Sbjct: 292 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 351 Query: 311 NGF 303 NG+ Sbjct: 352 NGY 354
>ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic| cerebellar degeneration-associated antigen) (Paraneoplastic limbic encephalitis antigen 21) Length = 367 Score = 53.5 bits (127), Expect = 6e-07 Identities = 20/64 (31%), Positives = 40/64 (62%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 ANL++ +P+ +++ F +GR++++++ VD+ TG S+ GF+ +D A+ AI Sbjct: 125 ANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIK 184 Query: 317 MMNG 306 +NG Sbjct: 185 GLNG 188 Score = 50.1 bits (118), Expect = 7e-06 Identities = 26/80 (32%), Positives = 37/80 (46%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 NL + ++PQ + F S G + S K+ DK TG S +GFV+Y P A AI+ Sbjct: 40 NLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINT 99 Query: 314 MNGFXXXXXXXXXXXKRDNS 255 +NG R +S Sbjct: 100 LNGLKLQTKTIKVSYARPSS 119 Score = 41.6 bits (96), Expect = 0.003 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Frame = -3 Query: 509 GPPGAN--LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAP 336 G GA +F+Y++ E + L F FG V + KV D T K FGFV+ + Sbjct: 278 GAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDE 337 Query: 335 AQAAISMMNGF 303 A AI+ +NG+ Sbjct: 338 AAMAIASLNGY 348
>ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)| Length = 326 Score = 53.5 bits (127), Expect = 6e-07 Identities = 23/64 (35%), Positives = 40/64 (62%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 ANL+I +P+ +D+ F FGR+++++V VD+ TG S+ F+ +D + A+ AI+ Sbjct: 106 ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAIT 165 Query: 317 MMNG 306 NG Sbjct: 166 SFNG 169 Score = 51.2 bits (121), Expect = 3e-06 Identities = 27/81 (33%), Positives = 40/81 (49%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 NL + ++PQ +L F S G V SAK+ DK G S +GFV+Y + A+ AI+ Sbjct: 21 NLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 Query: 314 MNGFXXXXXXXXXXXKRDNSK 252 +NG R +S+ Sbjct: 81 LNGLRLQSKTIKVSYARPSSE 101 Score = 41.2 bits (95), Expect = 0.003 Identities = 23/63 (36%), Positives = 34/63 (53%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 +FIY++ Q+ + L F FG V + KV D T K FGFV+ + A AI+ + Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305 Query: 311 NGF 303 NG+ Sbjct: 306 NGY 308
>ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 385 Score = 53.5 bits (127), Expect = 6e-07 Identities = 21/64 (32%), Positives = 40/64 (62%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 ANL++ +P+ ++L F +GR++++++ VD+ TG S+ GF+ +D A+ AI Sbjct: 137 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIK 196 Query: 317 MMNG 306 +NG Sbjct: 197 GLNG 200 Score = 51.6 bits (122), Expect = 2e-06 Identities = 26/80 (32%), Positives = 39/80 (48%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 NL + ++PQ ++ F S G + S K+ DK TG S +GFV+Y P A+ AI+ Sbjct: 52 NLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 111 Query: 314 MNGFXXXXXXXXXXXKRDNS 255 +NG R +S Sbjct: 112 LNGLRLQTKTIKVSYARPSS 131 Score = 38.5 bits (88), Expect = 0.021 Identities = 21/63 (33%), Positives = 33/63 (52%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 +F+Y++ + + L F FG V + KV D T K FGFV+ + A AI+ + Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363 Query: 311 NGF 303 NG+ Sbjct: 364 NGY 366
>ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 380 Score = 53.5 bits (127), Expect = 6e-07 Identities = 21/64 (32%), Positives = 40/64 (62%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 ANL++ +P+ ++L F +GR++++++ VD+ TG S+ GF+ +D A+ AI Sbjct: 132 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIK 191 Query: 317 MMNG 306 +NG Sbjct: 192 GLNG 195 Score = 51.6 bits (122), Expect = 2e-06 Identities = 26/80 (32%), Positives = 39/80 (48%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 NL + ++PQ ++ F S G + S K+ DK TG S +GFV+Y P A+ AI+ Sbjct: 47 NLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 106 Query: 314 MNGFXXXXXXXXXXXKRDNS 255 +NG R +S Sbjct: 107 LNGLRLQTKTIKVSYARPSS 126 Score = 38.5 bits (88), Expect = 0.021 Identities = 21/63 (33%), Positives = 33/63 (52%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 +F+Y++ + + L F FG V + KV D T K FGFV+ + A AI+ + Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358 Query: 311 NGF 303 NG+ Sbjct: 359 NGY 361
>ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Mel-N1) Length = 360 Score = 53.1 bits (126), Expect = 8e-07 Identities = 21/64 (32%), Positives = 40/64 (62%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 ANL++ +P+ ++L F +GR++++++ VD+ TG S+ GF+ +D A+ AI Sbjct: 125 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK 184 Query: 317 MMNG 306 +NG Sbjct: 185 GLNG 188 Score = 53.1 bits (126), Expect = 8e-07 Identities = 27/80 (33%), Positives = 40/80 (50%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 NL + ++PQ ++L F S G + S K+ DK TG S +GFV+Y P A+ AI+ Sbjct: 40 NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 99 Query: 314 MNGFXXXXXXXXXXXKRDNS 255 +NG R +S Sbjct: 100 LNGLRLQTKTIKVSYARPSS 119 Score = 41.2 bits (95), Expect = 0.003 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%) Frame = -3 Query: 515 LEGPPGAN--LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSP 342 + G PG +F+Y++ + + L F FG V + KV D T K FGFV+ + Sbjct: 269 IPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNY 328 Query: 341 APAQAAISMMNGF 303 A AI+ +NG+ Sbjct: 329 DEAAMAIASLNGY 341
>ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)| Length = 359 Score = 53.1 bits (126), Expect = 8e-07 Identities = 21/64 (32%), Positives = 40/64 (62%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 ANL++ +P+ ++L F +GR++++++ VD+ TG S+ GF+ +D A+ AI Sbjct: 125 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK 184 Query: 317 MMNG 306 +NG Sbjct: 185 GLNG 188 Score = 50.8 bits (120), Expect = 4e-06 Identities = 27/80 (33%), Positives = 39/80 (48%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 NL ++PQ ++L F S G + S K+ DK TG S +GFV+Y P A+ AI+ Sbjct: 40 NLIDNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 99 Query: 314 MNGFXXXXXXXXXXXKRDNS 255 +NG R +S Sbjct: 100 LNGLRLQTKTIKVSYARPSS 119 Score = 41.2 bits (95), Expect = 0.003 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%) Frame = -3 Query: 515 LEGPPGAN--LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSP 342 + G PG +F+Y++ + + L F FG V + KV D T K FGFV+ + Sbjct: 268 IPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNY 327 Query: 341 APAQAAISMMNGF 303 A AI+ +NG+ Sbjct: 328 DEAAMAIASLNGY 340
>ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2| Length = 359 Score = 53.1 bits (126), Expect = 8e-07 Identities = 21/64 (32%), Positives = 40/64 (62%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 ANL++ +P+ ++L F +GR++++++ VD+ TG S+ GF+ +D A+ AI Sbjct: 125 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK 184 Query: 317 MMNG 306 +NG Sbjct: 185 GLNG 188 Score = 53.1 bits (126), Expect = 8e-07 Identities = 27/80 (33%), Positives = 40/80 (50%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 NL + ++PQ ++L F S G + S K+ DK TG S +GFV+Y P A+ AI+ Sbjct: 40 NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 99 Query: 314 MNGFXXXXXXXXXXXKRDNS 255 +NG R +S Sbjct: 100 LNGLRLQTKTIKVSYARPSS 119 Score = 41.2 bits (95), Expect = 0.003 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%) Frame = -3 Query: 515 LEGPPGAN--LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSP 342 + G PG +F+Y++ + + L F FG V + KV D T K FGFV+ + Sbjct: 268 IPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNY 327 Query: 341 APAQAAISMMNGF 303 A AI+ +NG+ Sbjct: 328 DEAAMAIASLNGY 340
>ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Hel-N1) Length = 359 Score = 53.1 bits (126), Expect = 8e-07 Identities = 21/64 (32%), Positives = 40/64 (62%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 ANL++ +P+ ++L F +GR++++++ VD+ TG S+ GF+ +D A+ AI Sbjct: 125 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK 184 Query: 317 MMNG 306 +NG Sbjct: 185 GLNG 188 Score = 53.1 bits (126), Expect = 8e-07 Identities = 27/80 (33%), Positives = 40/80 (50%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 NL + ++PQ ++L F S G + S K+ DK TG S +GFV+Y P A+ AI+ Sbjct: 40 NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 99 Query: 314 MNGFXXXXXXXXXXXKRDNS 255 +NG R +S Sbjct: 100 LNGLRLQTKTIKVSYARPSS 119 Score = 41.2 bits (95), Expect = 0.003 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%) Frame = -3 Query: 515 LEGPPGAN--LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSP 342 + G PG +F+Y++ + + L F FG V + KV D T K FGFV+ + Sbjct: 268 IPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNY 327 Query: 341 APAQAAISMMNGF 303 A AI+ +NG+ Sbjct: 328 DEAAMAIASLNGY 340
>ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like| generic protein) (MelG) Length = 326 Score = 53.1 bits (126), Expect = 8e-07 Identities = 28/81 (34%), Positives = 41/81 (50%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 NL + ++PQ ++L F S G V SAK+ DK G S +GFV+Y + A+ AIS Sbjct: 21 NLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIST 80 Query: 314 MNGFXXXXXXXXXXXKRDNSK 252 +NG R +S+ Sbjct: 81 LNGLRLQSKTIKVSYARPSSE 101 Score = 50.1 bits (118), Expect = 7e-06 Identities = 22/64 (34%), Positives = 39/64 (60%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 ANL+I +P+ +D+ F FGR+++++V VD+ TG S+ F+ +D + A+ AI+ Sbjct: 106 ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAIT 165 Query: 317 MMNG 306 G Sbjct: 166 SFIG 169 Score = 40.0 bits (92), Expect = 0.007 Identities = 22/63 (34%), Positives = 34/63 (53%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 +FIY++ Q+ + L F FG V + KV D T K FGFV+ + + AI+ + Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEESAMAIASL 305 Query: 311 NGF 303 NG+ Sbjct: 306 NGY 308
>RBMS2_HUMAN (Q15434) RNA-binding motif, single-stranded-interacting protein 2| (Suppressor of CDC2 with RNA-binding motif 3) Length = 407 Score = 52.8 bits (125), Expect = 1e-06 Identities = 24/61 (39%), Positives = 37/61 (60%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 NL+I + DQDL Q +G+++S K +DK T K +GFV +DSP+ AQ A++ Sbjct: 57 NLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTA 116 Query: 314 M 312 + Sbjct: 117 L 117 Score = 40.0 bits (92), Expect = 0.007 Identities = 20/63 (31%), Positives = 35/63 (55%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 NL+I ++P +Q+L + FG+V+S ++ D +G S+ GF +S +A I+ Sbjct: 136 NLYISNLPLSMDEQELEGMLKPFGQVISTRILRD-TSGTSRGVGFARMESTEKCEAIITH 194 Query: 314 MNG 306 NG Sbjct: 195 FNG 197
>RBMS2_MOUSE (Q8VC70) RNA-binding motif, single-stranded-interacting protein 2| Length = 383 Score = 52.8 bits (125), Expect = 1e-06 Identities = 24/61 (39%), Positives = 37/61 (60%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 NL+I + DQDL Q +G+++S K +DK T K +GFV +DSP+ AQ A++ Sbjct: 59 NLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSSAQKAVTA 118 Query: 314 M 312 + Sbjct: 119 L 119 Score = 41.6 bits (96), Expect = 0.003 Identities = 21/63 (33%), Positives = 36/63 (57%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 NL+I ++P +Q+L + FG+V+S ++ D +GAS+ GF +S +A I+ Sbjct: 138 NLYISNLPLSMDEQELEGMLKPFGQVISTRILRD-TSGASRGVGFARMESTEKCEAIITH 196 Query: 314 MNG 306 NG Sbjct: 197 FNG 199
>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial| precursor (AtGRP2) Length = 158 Score = 52.4 bits (124), Expect = 1e-06 Identities = 29/62 (46%), Positives = 37/62 (59%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LFI + D L AF FG V+ AKV VD+ TG S+ FGFV+++ A AAIS M Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96 Query: 311 NG 306 +G Sbjct: 97 DG 98
>EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Embryonic poly(A)| binding protein) (ePABP) Length = 629 Score = 52.4 bits (124), Expect = 1e-06 Identities = 27/63 (42%), Positives = 39/63 (61%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N++I + ++ D+ L F +FG LS KV +D TG S+ FGFV+Y + AQ A+S Sbjct: 192 NVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-TGRSRGFGFVNYGNHEEAQKAVSE 250 Query: 314 MNG 306 MNG Sbjct: 251 MNG 253 Score = 47.4 bits (111), Expect = 5e-05 Identities = 25/65 (38%), Positives = 35/65 (53%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G NL++ ++ D L F +G + SAKV + G SK FGFV + SP A A+ Sbjct: 293 GVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEG--GHSKGFGFVCFSSPEEATKAV 350 Query: 320 SMMNG 306 + MNG Sbjct: 351 TEMNG 355 Score = 42.7 bits (99), Expect = 0.001 Identities = 22/63 (34%), Positives = 36/63 (57%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+FI ++ + ++ L F +FG +LS KV D+ S+ +GFV +++ A AI Sbjct: 100 NVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDE--HGSRGYGFVHFETQEAANRAIQT 157 Query: 314 MNG 306 MNG Sbjct: 158 MNG 160
>PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-binding protein| 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein 1) (APP-1) Length = 644 Score = 51.6 bits (122), Expect = 2e-06 Identities = 27/65 (41%), Positives = 37/65 (56%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G NL+I ++ D+ L F FG + SAKV ++ G SK FGFV + SP A A+ Sbjct: 293 GVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAV 350 Query: 320 SMMNG 306 + MNG Sbjct: 351 TEMNG 355 Score = 50.8 bits (120), Expect = 4e-06 Identities = 27/63 (42%), Positives = 35/63 (55%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N++I + +E D+ L F FG+ LS KV D G SK FGFVSY+ A A+ Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEE 250 Query: 314 MNG 306 MNG Sbjct: 251 MNG 253 Score = 42.0 bits (97), Expect = 0.002 Identities = 22/63 (34%), Positives = 35/63 (55%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+FI ++ + ++ L F +FG +LS KV D+ SK + FV +++ A AI Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEK 157 Query: 314 MNG 306 MNG Sbjct: 158 MNG 160
>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 668 Score = 51.2 bits (121), Expect = 3e-06 Identities = 25/67 (37%), Positives = 40/67 (59%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 P N+++ ++P+E D +L F +G + SA V D++ G S+ FGFV++ SP A Sbjct: 222 PSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQS-GNSRSFGFVNFVSPEAAAV 280 Query: 326 AISMMNG 306 A+ MNG Sbjct: 281 AVEKMNG 287 Score = 49.7 bits (117), Expect = 9e-06 Identities = 26/63 (41%), Positives = 37/63 (58%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+FI ++ ++ L F SFG +LS KV +D G SK +GFV ++ AQAAI Sbjct: 133 NVFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDK 191 Query: 314 MNG 306 +NG Sbjct: 192 LNG 194 Score = 49.3 bits (116), Expect = 1e-05 Identities = 24/65 (36%), Positives = 38/65 (58%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G+NL++ ++ D+ L F +G V S KV ++ + G S+ FGFV+Y +P A A+ Sbjct: 327 GSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMN-SQGLSRGFGFVAYSNPEEALLAM 385 Query: 320 SMMNG 306 MNG Sbjct: 386 KEMNG 390
>EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (Embryonic| poly(A) binding protein-A) (ePABP-A) (ePAB-A) (XePABP-A) Length = 629 Score = 50.8 bits (120), Expect = 4e-06 Identities = 26/63 (41%), Positives = 39/63 (61%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N++I + ++ D+ L F +FG LS KV +D + G S+ FGFV+Y + AQ A+S Sbjct: 192 NVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDS-GRSRGFGFVNYGNHEEAQKAVSE 250 Query: 314 MNG 306 MNG Sbjct: 251 MNG 253 Score = 46.6 bits (109), Expect = 8e-05 Identities = 25/65 (38%), Positives = 35/65 (53%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G NL++ ++ D L F +G + SAKV + G SK FGFV + SP A A+ Sbjct: 293 GVNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEG--GHSKGFGFVCFSSPEEATKAV 350 Query: 320 SMMNG 306 + MNG Sbjct: 351 TEMNG 355 Score = 42.4 bits (98), Expect = 0.001 Identities = 22/63 (34%), Positives = 36/63 (57%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+FI ++ + ++ L F +FG +LS KV D+ S+ +GFV +++ A AI Sbjct: 100 NVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDE--HGSRGYGFVHFETHEAANRAIQT 157 Query: 314 MNG 306 MNG Sbjct: 158 MNG 160
>PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 634 Score = 50.1 bits (118), Expect = 7e-06 Identities = 22/63 (34%), Positives = 41/63 (65%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+++ + ++F D+ L F+ +G++ S KV + K G SK FGFV++++ A+AA+ Sbjct: 184 NVYVKNFTEDFDDEKLKEFFEPYGKITSYKV-MSKEDGKSKGFGFVAFETTEAAEAAVQA 242 Query: 314 MNG 306 +NG Sbjct: 243 LNG 245 Score = 48.5 bits (114), Expect = 2e-05 Identities = 24/65 (36%), Positives = 38/65 (58%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G NL++ ++ D L AF +G + SAKV D+ G SK FGFV +++ + A A+ Sbjct: 286 GVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDE-EGRSKGFGFVCFNAASEATCAV 344 Query: 320 SMMNG 306 + +NG Sbjct: 345 TELNG 349 Score = 43.1 bits (100), Expect = 9e-04 Identities = 22/63 (34%), Positives = 35/63 (55%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 A+L++ +PQ+ + L F S G VLS +V D T S + +V++ PA A+ A+ Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61 Query: 317 MMN 309 MN Sbjct: 62 TMN 64 Score = 42.4 bits (98), Expect = 0.001 Identities = 21/63 (33%), Positives = 37/63 (58%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+FI ++ + ++ + F +FG +LS KV D+ G SK +GFV +++ A +I Sbjct: 91 NVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDE-KGNSKGYGFVHFETEEAANTSIDK 149 Query: 314 MNG 306 +NG Sbjct: 150 VNG 152
>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 50.1 bits (118), Expect = 7e-06 Identities = 26/65 (40%), Positives = 37/65 (56%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G NL++ ++ D+ L F FG + SAKV ++ G SK FGFV + SP A A+ Sbjct: 293 GVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAV 350 Query: 320 SMMNG 306 + MNG Sbjct: 351 TEMNG 355 Score = 49.3 bits (116), Expect = 1e-05 Identities = 26/63 (41%), Positives = 37/63 (58%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N++I + ++ D+ L F FG LS KV D++ G SK FGFVS++ AQ A+ Sbjct: 192 NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDE 250 Query: 314 MNG 306 MNG Sbjct: 251 MNG 253 Score = 45.4 bits (106), Expect = 2e-04 Identities = 23/63 (36%), Positives = 37/63 (58%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+FI ++ + ++ L F +FG +LS KV D+ SK +GFV +++ A+ AI Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEK 157 Query: 314 MNG 306 MNG Sbjct: 158 MNG 160
>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 50.1 bits (118), Expect = 7e-06 Identities = 26/65 (40%), Positives = 37/65 (56%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G NL++ ++ D+ L F FG + SAKV ++ G SK FGFV + SP A A+ Sbjct: 293 GVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAV 350 Query: 320 SMMNG 306 + MNG Sbjct: 351 TEMNG 355 Score = 49.3 bits (116), Expect = 1e-05 Identities = 26/63 (41%), Positives = 37/63 (58%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N++I + ++ D+ L F FG LS KV D++ G SK FGFVS++ AQ A+ Sbjct: 192 NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDE 250 Query: 314 MNG 306 MNG Sbjct: 251 MNG 253 Score = 45.4 bits (106), Expect = 2e-04 Identities = 23/63 (36%), Positives = 37/63 (58%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+FI ++ + ++ L F +FG +LS KV D+ SK +GFV +++ A+ AI Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEK 157 Query: 314 MNG 306 MNG Sbjct: 158 MNG 160
>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 50.1 bits (118), Expect = 7e-06 Identities = 26/65 (40%), Positives = 37/65 (56%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G NL++ ++ D+ L F FG + SAKV ++ G SK FGFV + SP A A+ Sbjct: 293 GVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAV 350 Query: 320 SMMNG 306 + MNG Sbjct: 351 TEMNG 355 Score = 48.9 bits (115), Expect = 2e-05 Identities = 26/63 (41%), Positives = 37/63 (58%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N++I + ++ D+ L F FG LS KV D++ G SK FGFVS++ AQ A+ Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDE 250 Query: 314 MNG 306 MNG Sbjct: 251 MNG 253 Score = 45.4 bits (106), Expect = 2e-04 Identities = 23/63 (36%), Positives = 37/63 (58%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+FI ++ + ++ L F +FG +LS KV D+ SK +GFV +++ A+ AI Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEK 157 Query: 314 MNG 306 MNG Sbjct: 158 MNG 160
>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 50.1 bits (118), Expect = 7e-06 Identities = 26/65 (40%), Positives = 37/65 (56%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G NL++ ++ D+ L F FG + SAKV ++ G SK FGFV + SP A A+ Sbjct: 293 GVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAV 350 Query: 320 SMMNG 306 + MNG Sbjct: 351 TEMNG 355 Score = 48.9 bits (115), Expect = 2e-05 Identities = 26/63 (41%), Positives = 37/63 (58%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N++I + ++ D+ L F FG LS KV D++ G SK FGFVS++ AQ A+ Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDE 250 Query: 314 MNG 306 MNG Sbjct: 251 MNG 253 Score = 45.4 bits (106), Expect = 2e-04 Identities = 23/63 (36%), Positives = 37/63 (58%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+FI ++ + ++ L F +FG +LS KV D+ SK +GFV +++ A+ AI Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEK 157 Query: 314 MNG 306 MNG Sbjct: 158 MNG 160
>EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (Embryonic| poly(A) binding protein-B) (ePABP-B) (ePAB-B) (XePABP-B) Length = 629 Score = 50.1 bits (118), Expect = 7e-06 Identities = 25/63 (39%), Positives = 39/63 (61%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N++I + ++ D+ L F +FG LS KV +D + G S+ FGFV+Y + AQ A++ Sbjct: 192 NVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNS-GRSRGFGFVNYGNHEEAQKAVTE 250 Query: 314 MNG 306 MNG Sbjct: 251 MNG 253 Score = 45.8 bits (107), Expect = 1e-04 Identities = 24/65 (36%), Positives = 34/65 (52%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G NL++ ++ D L F +G + S KV + G SK FGFV + SP A A+ Sbjct: 293 GVNLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTEG--GHSKGFGFVCFSSPEEATKAV 350 Query: 320 SMMNG 306 + MNG Sbjct: 351 TEMNG 355 Score = 41.2 bits (95), Expect = 0.003 Identities = 22/63 (34%), Positives = 35/63 (55%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+FI ++ ++ L F +FG +LS KV D+ S+ +GFV +++ A AI Sbjct: 100 NVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEY--GSRGYGFVHFETQEAANRAIQT 157 Query: 314 MNG 306 MNG Sbjct: 158 MNG 160
>YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 intergenic| region Length = 781 Score = 49.7 bits (117), Expect = 9e-06 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 19/84 (22%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFV-------------------DKATGAS 375 +NL++ HIP + D+DL ++SFG ++S KV D G+S Sbjct: 540 SNLYVKHIPLSWTDEDLYDFYKSFGEIISVKVITVGGSKNKYRQQSNDSSSDNDLPVGSS 599 Query: 374 KCFGFVSYDSPAPAQAAISMMNGF 303 + +GFVS++SP A AI +G+ Sbjct: 600 RGYGFVSFESPLDAAKAILNTDGY 623 Score = 42.7 bits (99), Expect = 0.001 Identities = 22/66 (33%), Positives = 34/66 (51%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 PG N+F+ I + +L+ F +G +LS K+ DK G +GF+SY + A Sbjct: 194 PG-NIFVGGIAKSLSIGELSFLFSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASLC 252 Query: 323 ISMMNG 306 I +NG Sbjct: 253 IKELNG 258
>PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-binding protein| 1-B) (Cytoplasmic poly(A)-binding protein 1-B) (PABP-B) (PABP 1-B) (xPABP1-B) Length = 633 Score = 49.7 bits (117), Expect = 9e-06 Identities = 26/65 (40%), Positives = 37/65 (56%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G NL++ ++ D+ L F FG + SAKV ++ G SK FGFV + SP A A+ Sbjct: 293 GVNLYVKNLDDGIDDERLRKEFTPFGSITSAKVMMEG--GRSKGFGFVCFSSPEEATKAV 350 Query: 320 SMMNG 306 + MNG Sbjct: 351 TEMNG 355 Score = 45.4 bits (106), Expect = 2e-04 Identities = 23/63 (36%), Positives = 37/63 (58%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+FI ++ + ++ L F +FG +LS KV D+ SK +GFV +++ A+ AI Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIDK 157 Query: 314 MNG 306 MNG Sbjct: 158 MNG 160 Score = 44.3 bits (103), Expect = 4e-04 Identities = 24/63 (38%), Positives = 35/63 (55%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N++I + ++ D+ L F +G LS KV D G S+ FGFVS++ AQ A+ Sbjct: 192 NVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDH-GKSRGFGFVSFERHEDAQKAVDD 250 Query: 314 MNG 306 MNG Sbjct: 251 MNG 253
>PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PABP 2) Length = 629 Score = 49.7 bits (117), Expect = 9e-06 Identities = 26/63 (41%), Positives = 38/63 (60%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+FI ++ + + L F SFG ++S KV VD ++G SK +GFV Y + AQ AI Sbjct: 125 NIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEK 183 Query: 314 MNG 306 +NG Sbjct: 184 LNG 186 Score = 45.8 bits (107), Expect = 1e-04 Identities = 22/63 (34%), Positives = 38/63 (60%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+++ ++ + D DL +AF +G++ SA V D G SK FGFV++++ A A+ Sbjct: 216 NVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKD-GEGKSKGFGFVNFENADDAARAVES 274 Query: 314 MNG 306 +NG Sbjct: 275 LNG 277
>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) (Testis-specific poly(A)-binding protein) Length = 631 Score = 49.7 bits (117), Expect = 9e-06 Identities = 26/63 (41%), Positives = 37/63 (58%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 NL++ ++ D+ L AF FG + SAKV ++ G SK FGFV + SP A A++ Sbjct: 295 NLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTE 352 Query: 314 MNG 306 MNG Sbjct: 353 MNG 355 Score = 48.9 bits (115), Expect = 2e-05 Identities = 26/63 (41%), Positives = 37/63 (58%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N++I + ++ D+ L F FG LS KV D++ G SK FGFVS++ AQ A+ Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDE 250 Query: 314 MNG 306 MNG Sbjct: 251 MNG 253 Score = 40.4 bits (93), Expect = 0.006 Identities = 20/63 (31%), Positives = 35/63 (55%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+F+ ++ + ++ L +FG +LS V D+ SK +GFV +++ A+ AI Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIKK 157 Query: 314 MNG 306 MNG Sbjct: 158 MNG 160
>SXL_MEGSC (O01671) Sex-lethal homolog| Length = 321 Score = 49.7 bits (117), Expect = 9e-06 Identities = 23/65 (35%), Positives = 39/65 (60%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G NL + ++PQ+ D++L F++ G + + ++ D TG S +GFV + S A A AI Sbjct: 77 GTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAI 136 Query: 320 SMMNG 306 + +NG Sbjct: 137 NNLNG 141
>TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)| Length = 386 Score = 49.3 bits (116), Expect = 1e-05 Identities = 25/63 (39%), Positives = 37/63 (58%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 ++F+ + E +D+ AF FGR+ A+V D ATG SK +GFVS+ + A+ AI Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166 Query: 314 MNG 306 M G Sbjct: 167 MGG 169 Score = 29.6 bits (65), Expect = 9.9 Identities = 17/67 (25%), Positives = 29/67 (43%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 P ++ + +Q + F FG+++ +VF DK + FV + S A Sbjct: 211 PNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKG------YSFVRFSSHESAAH 264 Query: 326 AISMMNG 306 AI +NG Sbjct: 265 AIVSVNG 271
>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein| 1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A) (PABP 1-A) (xPABP1-A) Length = 633 Score = 49.3 bits (116), Expect = 1e-05 Identities = 26/65 (40%), Positives = 37/65 (56%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G NL++ ++ D+ L F FG + SAKV ++ G SK FGFV + SP A A+ Sbjct: 293 GVNLYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAV 350 Query: 320 SMMNG 306 + MNG Sbjct: 351 TEMNG 355 Score = 46.6 bits (109), Expect = 8e-05 Identities = 25/63 (39%), Positives = 34/63 (53%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N++I + + D+ L F +G LS KV D G SK FGFVS++ AQ A+ Sbjct: 192 NVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDD-NGKSKGFGFVSFERHEDAQKAVDE 250 Query: 314 MNG 306 MNG Sbjct: 251 MNG 253 Score = 45.4 bits (106), Expect = 2e-04 Identities = 23/63 (36%), Positives = 37/63 (58%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+FI ++ + ++ L F +FG +LS KV D+ SK +GFV +++ A+ AI Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIDK 157 Query: 314 MNG 306 MNG Sbjct: 158 MNG 160
>PPIL4_GIBZE (Q4IE79) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 605 Score = 48.9 bits (115), Expect = 2e-05 Identities = 25/67 (37%), Positives = 36/67 (53%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 PP LF+ + GD+DL F FG++LS +V D+ TG S + F+ Y+ A +A Sbjct: 248 PPENVLFVCKLNPVTGDEDLELIFGRFGKILSCEVIRDQKTGDSLQYAFIEYEDKASCEA 307 Query: 326 AISMMNG 306 A M G Sbjct: 308 AYFKMQG 314
>SXL_CERCA (O61374) Sex-lethal homolog (CCSXL)| Length = 348 Score = 48.5 bits (114), Expect = 2e-05 Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 3/127 (2%) Frame = -3 Query: 677 SPYPAGPGMQYPGSY---PGGGINSRPYMNSHNSVKVXXXXXXXXXXXXXXXXXXPQLEG 507 S YP GP M G Y GGG M S N++ G Sbjct: 50 SSYP-GPSMNRRGGYNDFSGGGGGGGGTMGSMNNM--VNAASTNSLNCGGGGGRDGHGGG 106 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 G NL + ++PQ+ D++L F++ G + + ++ D TG S + FV + + +Q Sbjct: 107 SNGTNLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQR 166 Query: 326 AISMMNG 306 AI +NG Sbjct: 167 AIKSLNG 173
>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)| Length = 276 Score = 48.1 bits (113), Expect = 3e-05 Identities = 23/66 (34%), Positives = 38/66 (57%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 P +++ +IP + D L F G+V+SA+V D+ +G S+ FGFV+ S A A Sbjct: 189 PTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEA 248 Query: 323 ISMMNG 306 I+ ++G Sbjct: 249 IANLDG 254
>TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding protein TIA-1)| (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform p15 (p15-TIA-1)] Length = 386 Score = 48.1 bits (113), Expect = 3e-05 Identities = 24/63 (38%), Positives = 37/63 (58%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 ++F+ + + +D+ AF FGR+ A+V D ATG SK +GFVS+ + A+ AI Sbjct: 107 HVFVGDLSPQITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166 Query: 314 MNG 306 M G Sbjct: 167 MGG 169 Score = 30.4 bits (67), Expect = 5.8 Identities = 17/67 (25%), Positives = 30/67 (44%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 P ++ + +Q + F FG+++ +VF DK + FV ++S A Sbjct: 211 PSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKG------YSFVRFNSHESAAH 264 Query: 326 AISMMNG 306 AI +NG Sbjct: 265 AIVSVNG 271
>SXL_CHRRU (O97018) Sex-lethal homolog| Length = 307 Score = 48.1 bits (113), Expect = 3e-05 Identities = 33/124 (26%), Positives = 50/124 (40%) Frame = -3 Query: 677 SPYPAGPGMQYPGSYPGGGINSRPYMNSHNSVKVXXXXXXXXXXXXXXXXXXPQLEGPPG 498 S YP M + G GGG N S +G G Sbjct: 26 SSYPGPSAMNHRGGR-GGGYNDFSGGGSAMGSMCNMAPAISTNSVNSGGGDCGDNQGCNG 84 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 NL + ++PQ+ D++L F++ G + + ++ D TG S + FV + S AQ AI Sbjct: 85 TNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIK 144 Query: 317 MMNG 306 +NG Sbjct: 145 SLNG 148
>TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)| Length = 375 Score = 47.8 bits (112), Expect = 4e-05 Identities = 24/63 (38%), Positives = 37/63 (58%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 ++F+ + E +D+ AF FG++ A+V D ATG SK +GFVS+ + A+ AI Sbjct: 98 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 157 Query: 314 MNG 306 M G Sbjct: 158 MGG 160
>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor| Length = 315 Score = 47.8 bits (112), Expect = 4e-05 Identities = 26/82 (31%), Positives = 40/82 (48%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 +++ +IP D L F G+V+SA+V D+ TG S+ FGFV+ S A AI+ + Sbjct: 232 IYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANL 291 Query: 311 NGFXXXXXXXXXXXKRDNSKHN 246 +G D S+ N Sbjct: 292 DGQSLDGRTIRVNVAEDRSRRN 313
>TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)| Length = 392 Score = 47.8 bits (112), Expect = 4e-05 Identities = 24/63 (38%), Positives = 37/63 (58%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 ++F+ + E +D+ AF FG++ A+V D ATG SK +GFVS+ + A+ AI Sbjct: 115 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 174 Query: 314 MNG 306 M G Sbjct: 175 MGG 177
>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast| precursor Length = 289 Score = 47.8 bits (112), Expect = 4e-05 Identities = 24/63 (38%), Positives = 34/63 (53%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LF+ ++P LA F+S G V +V DK TG S+ FGFV+ S + +AA Sbjct: 93 LFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQF 152 Query: 311 NGF 303 NG+ Sbjct: 153 NGY 155 Score = 46.2 bits (108), Expect = 1e-04 Identities = 23/65 (35%), Positives = 36/65 (55%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G +++ ++ D L F G+V+ A+V D+ +G SK FGFV+YDS Q AI Sbjct: 203 GNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAI 262 Query: 320 SMMNG 306 ++G Sbjct: 263 KSLDG 267
>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein cp29) Length = 342 Score = 47.4 bits (111), Expect = 5e-05 Identities = 24/67 (35%), Positives = 34/67 (50%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 P LF+ ++ LA F+S G V +V DK TG S+ FGFV+ + A +AA Sbjct: 97 PDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAA 156 Query: 323 ISMMNGF 303 NG+ Sbjct: 157 AQQFNGY 163 Score = 45.4 bits (106), Expect = 2e-04 Identities = 23/65 (35%), Positives = 36/65 (55%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G L++ ++ D L + F G+V+ A+V D+ +G SK FGFV+ S Q AI Sbjct: 256 GNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAI 315 Query: 320 SMMNG 306 + +NG Sbjct: 316 NSLNG 320
>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein| Length = 157 Score = 47.0 bits (110), Expect = 6e-05 Identities = 22/51 (43%), Positives = 32/51 (62%) Frame = -3 Query: 458 DQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMMNG 306 ++ L +AF S+G +L +KV D+ TG S+ FGFV++ S AI MNG Sbjct: 21 NESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNG 71
>PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-binding protein| PUB1 (ARS consensus-binding protein ACBP-60) (Poly(U)-binding protein) (Poly uridylate-binding protein) Length = 452 Score = 47.0 bits (110), Expect = 6e-05 Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 2/97 (2%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 NLF+ + D+ L +AF+ F LS V D TG+S+ +GFVS+ S AQ A+ Sbjct: 162 NLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDS 221 Query: 314 MNG--FXXXXXXXXXXXKRDNSKHNKLY*QQQWKPSN 210 M G KRDN+ +N ++ + +N Sbjct: 222 MQGQDLNGRPLRINWAAKRDNNNNNNYQQRRNYGNNN 258
>MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| (Nucleolar phosphoprotein NOPP34-like protein) Length = 269 Score = 46.6 bits (109), Expect = 8e-05 Identities = 26/89 (29%), Positives = 40/89 (44%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 PG L++ H+P+ + L F+ FG+VL +V K TG SK +GFV ++ A+ Sbjct: 44 PGV-LYVGHLPRGLFEPQLKSYFEQFGKVLRLRVSRSKKTGGSKGYGFVEFECDEVAKIV 102 Query: 323 ISMMNGFXXXXXXXXXXXKRDNSKHNKLY 237 MN + H KL+ Sbjct: 103 AETMNNYLMGERIIKCHVIPPEKVHEKLF 131
>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)| Length = 233 Score = 46.6 bits (109), Expect = 8e-05 Identities = 23/70 (32%), Positives = 40/70 (57%) Frame = -3 Query: 512 EGPPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPA 333 E P A LF+ ++P + + LA F + G V A+V ++ T S+ FGFV+ + A Sbjct: 50 EPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEA 109 Query: 332 QAAISMMNGF 303 + A+ ++NG+ Sbjct: 110 EKAVELLNGY 119 Score = 45.8 bits (107), Expect = 1e-04 Identities = 21/66 (31%), Positives = 37/66 (56%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 P +++ ++P + L F G+V+SA+V D+ TG S+ FGFV+ S + A Sbjct: 147 PSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDA 206 Query: 323 ISMMNG 306 I+ ++G Sbjct: 207 IAALDG 212
>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2| Length = 168 Score = 46.6 bits (109), Expect = 8e-05 Identities = 22/51 (43%), Positives = 32/51 (62%) Frame = -3 Query: 458 DQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMMNG 306 ++ L AF +FG+V+ +KV D+ TG S+ FGFV++ S AI MNG Sbjct: 21 NETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNG 71
>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10| Length = 169 Score = 46.6 bits (109), Expect = 8e-05 Identities = 21/52 (40%), Positives = 30/52 (57%) Frame = -3 Query: 461 GDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMMNG 306 GD +L F FG V+ +K+ D+ TG S+ FGFV++ + AI MNG Sbjct: 18 GDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNG 69
>RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial precursor| Length = 212 Score = 46.2 bits (108), Expect = 1e-04 Identities = 25/62 (40%), Positives = 35/62 (56%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 L+I + + L AF SF V A+V +K TG S+ +GFV++ S A +AIS M Sbjct: 33 LYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAM 92 Query: 311 NG 306 NG Sbjct: 93 NG 94
>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 45.8 bits (107), Expect = 1e-04 Identities = 24/67 (35%), Positives = 35/67 (52%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 PPG ++I ++ + D+ L F SFG + AKV ++ G K FG V + S A Sbjct: 299 PPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATK 356 Query: 326 AISMMNG 306 A+ MNG Sbjct: 357 AVDEMNG 363 Score = 43.5 bits (101), Expect = 7e-04 Identities = 24/63 (38%), Positives = 36/63 (57%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+FI ++ + ++ L + F +FG +LS KV D SK + +V +DS A A AI Sbjct: 107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWH 164 Query: 314 MNG 306 MNG Sbjct: 165 MNG 167
>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 45.8 bits (107), Expect = 1e-04 Identities = 24/67 (35%), Positives = 35/67 (52%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 PPG ++I ++ + D+ L F SFG + AKV ++ G K FG V + S A Sbjct: 299 PPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATK 356 Query: 326 AISMMNG 306 A+ MNG Sbjct: 357 AVDEMNG 363 Score = 43.5 bits (101), Expect = 7e-04 Identities = 24/63 (38%), Positives = 36/63 (57%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+FI ++ + ++ L + F +FG +LS KV D SK + +V +DS A A AI Sbjct: 107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWH 164 Query: 314 MNG 306 MNG Sbjct: 165 MNG 167
>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 45.8 bits (107), Expect = 1e-04 Identities = 24/67 (35%), Positives = 35/67 (52%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 PPG ++I ++ + D+ L F SFG + AKV ++ G K FG V + S A Sbjct: 299 PPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATK 356 Query: 326 AISMMNG 306 A+ MNG Sbjct: 357 AVDEMNG 363 Score = 43.5 bits (101), Expect = 7e-04 Identities = 24/63 (38%), Positives = 36/63 (57%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+FI ++ + ++ L + F +FG +LS KV D SK + +V +DS A A AI Sbjct: 107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWH 164 Query: 314 MNG 306 MNG Sbjct: 165 MNG 167
>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 45.8 bits (107), Expect = 1e-04 Identities = 24/67 (35%), Positives = 35/67 (52%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 PPG ++I ++ + D+ L F SFG + AKV ++ G K FG V + S A Sbjct: 299 PPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATK 356 Query: 326 AISMMNG 306 A+ MNG Sbjct: 357 AVDEMNG 363 Score = 43.5 bits (101), Expect = 7e-04 Identities = 24/63 (38%), Positives = 36/63 (57%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+FI ++ + ++ L + F +FG +LS KV D SK + +V +DS A A AI Sbjct: 107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWH 164 Query: 314 MNG 306 MNG Sbjct: 165 MNG 167
>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 45.8 bits (107), Expect = 1e-04 Identities = 24/67 (35%), Positives = 35/67 (52%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 PPG ++I ++ + D+ L F SFG + AKV ++ G K FG V + S A Sbjct: 299 PPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATK 356 Query: 326 AISMMNG 306 A+ MNG Sbjct: 357 AVDEMNG 363 Score = 43.5 bits (101), Expect = 7e-04 Identities = 24/63 (38%), Positives = 36/63 (57%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+FI ++ + ++ L + F +FG +LS KV D SK + +V +DS A A AI Sbjct: 107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWH 164 Query: 314 MNG 306 MNG Sbjct: 165 MNG 167
>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 45.8 bits (107), Expect = 1e-04 Identities = 24/67 (35%), Positives = 35/67 (52%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 PPG ++I ++ + D+ L F SFG + AKV ++ G K FG V + S A Sbjct: 299 PPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATK 356 Query: 326 AISMMNG 306 A+ MNG Sbjct: 357 AVDEMNG 363 Score = 43.5 bits (101), Expect = 7e-04 Identities = 24/63 (38%), Positives = 36/63 (57%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+FI ++ + ++ L + F +FG +LS KV D SK + +V +DS A A AI Sbjct: 107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWH 164 Query: 314 MNG 306 MNG Sbjct: 165 MNG 167
>SXL_MUSDO (O17310) Sex-lethal homolog| Length = 324 Score = 45.8 bits (107), Expect = 1e-04 Identities = 22/65 (33%), Positives = 37/65 (56%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G NL + ++PQ+ D++L F++ G + + ++ D TG S + FV + S AQ AI Sbjct: 101 GTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAI 160 Query: 320 SMMNG 306 +NG Sbjct: 161 KTVNG 165
>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)| Length = 273 Score = 45.4 bits (106), Expect = 2e-04 Identities = 23/67 (34%), Positives = 33/67 (49%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 P +F+ ++P LA F+ G V +V DK TG S+ FGFV+ S +AA Sbjct: 85 PDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAA 144 Query: 323 ISMMNGF 303 NG+ Sbjct: 145 CQQFNGY 151 Score = 40.0 bits (92), Expect = 0.007 Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Frame = -3 Query: 458 DQD-LAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMMNG 306 DQD L F G+V+ AKV D+ +G S+ FGFV+Y S AI ++G Sbjct: 200 DQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDG 251
>SAP49_SCHPO (O14102) Spliceosome-associated protein 49| Length = 335 Score = 45.4 bits (106), Expect = 2e-04 Identities = 25/64 (39%), Positives = 35/64 (54%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 GANLF+ ++ ++ L F + G+++ A G SK +GFVSYDS A AAI Sbjct: 98 GANLFVGNLDPLVDERVLYDTFSALGQLVKAPQVARDENGRSKGYGFVSYDSFETADAAI 157 Query: 320 SMMN 309 MN Sbjct: 158 EAMN 161
>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear| (Poly(A)-binding protein) (PABP) (ARS consensus-binding protein ACBP-67) (Polyadenylate tail-binding protein) Length = 576 Score = 45.1 bits (105), Expect = 2e-04 Identities = 23/63 (36%), Positives = 37/63 (58%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+FI ++ + ++ L F FG +LS+K+ D+ G SK FGFV ++ A+ AI Sbjct: 126 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDA 184 Query: 314 MNG 306 +NG Sbjct: 185 LNG 187 Score = 44.3 bits (103), Expect = 4e-04 Identities = 24/64 (37%), Positives = 34/64 (53%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G NLF+ ++ D+ L F +G + SAKV + G SK FGFV + +P A AI Sbjct: 320 GVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKV-MRTENGKSKGFGFVCFSTPEEATKAI 378 Query: 320 SMMN 309 + N Sbjct: 379 TEKN 382 Score = 40.0 bits (92), Expect = 0.007 Identities = 22/62 (35%), Positives = 33/62 (53%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 NL++ +I E D+ F FG ++SA + D A G K FGFV+Y+ A A+ Sbjct: 219 NLYVKNINSETTDEQFQELFAKFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEA 277 Query: 314 MN 309 +N Sbjct: 278 LN 279
>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated| protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit) Length = 424 Score = 44.7 bits (104), Expect = 3e-04 Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSA-KVFVDKATGASKCFGFVSYDSPAPAQAA 324 GAN+FI ++ E ++ L F +FG +L K+ D TG SK + F+++ S + AA Sbjct: 99 GANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAA 158 Query: 323 ISMMNG 306 I MNG Sbjct: 159 IEAMNG 164 Score = 30.8 bits (68), Expect = 4.4 Identities = 17/63 (26%), Positives = 32/63 (50%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 A +++ + ++ + L F G V++ + D+ TG + +GFV + S A AI Sbjct: 13 ATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIK 72 Query: 317 MMN 309 +MN Sbjct: 73 IMN 75
>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)| Length = 169 Score = 44.7 bits (104), Expect = 3e-04 Identities = 20/51 (39%), Positives = 30/51 (58%) Frame = -3 Query: 458 DQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMMNG 306 D+DL F FG V+ +K+ D+ +G S+ FGFV++ + AI MNG Sbjct: 19 DEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNG 69
>ELAV_DROME (P16914) Protein elav (Embryonic lethal abnormal visual protein)| Length = 483 Score = 44.3 bits (103), Expect = 4e-04 Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Frame = -3 Query: 509 GPPGAN-LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPA 333 GP GA +FIY++ E + L F FG V S K+ D T K +GFVS + A Sbjct: 397 GPGGAYPIFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEA 456 Query: 332 QAAISMMNGF 303 AI +NG+ Sbjct: 457 AMAIRALNGY 466 Score = 41.6 bits (96), Expect = 0.003 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 13/76 (17%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDK-------------ATGASKCFGFVS 354 NL + ++PQ + ++ F S G + S K+ DK + G S +GFV+ Sbjct: 150 NLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVN 209 Query: 353 YDSPAPAQAAISMMNG 306 Y P A+ A++++NG Sbjct: 210 YVRPQDAEQAVNVLNG 225 Score = 39.3 bits (90), Expect = 0.012 Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGA-SKCFGFVSYDSPAPAQAA 324 GANL++ +P+ Q+L F FG ++++++ + +K GF+ +D A A Sbjct: 247 GANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRA 306 Query: 323 ISMMNG 306 I +NG Sbjct: 307 IIALNG 312
>PPIL4_EMENI (Q5ARI5) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 461 Score = 44.3 bits (103), Expect = 4e-04 Identities = 23/67 (34%), Positives = 34/67 (50%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 PP LF+ + D+DL F FG++LS +V DK TG S + F+ ++S + Sbjct: 245 PPENVLFVCKLNPVTQDEDLELIFSRFGKILSCEVIRDKRTGDSLQYAFIEFESQKDCEQ 304 Query: 326 AISMMNG 306 A M G Sbjct: 305 AYFKMQG 311
>ELAV_DROVI (P23241) Protein elav (Embryonic lethal abnormal visual protein)| Length = 519 Score = 44.3 bits (103), Expect = 4e-04 Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Frame = -3 Query: 509 GPPGAN-LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPA 333 GP GA +FIY++ E + L F FG V S K+ D T K +GFVS + A Sbjct: 433 GPGGAYPIFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEA 492 Query: 332 QAAISMMNGF 303 AI +NG+ Sbjct: 493 AMAIRALNGY 502 Score = 41.6 bits (96), Expect = 0.003 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 13/76 (17%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDK-------------ATGASKCFGFVS 354 NL + ++PQ + ++ F S G + S K+ DK + G S +GFV+ Sbjct: 186 NLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVN 245 Query: 353 YDSPAPAQAAISMMNG 306 Y P A+ A++++NG Sbjct: 246 YVRPQDAEQAVNVLNG 261 Score = 39.3 bits (90), Expect = 0.012 Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGA-SKCFGFVSYDSPAPAQAA 324 GANL++ +P+ Q+L F FG ++++++ + +K GF+ +D A A Sbjct: 283 GANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRA 342 Query: 323 ISMMNG 306 I +NG Sbjct: 343 IIALNG 348
>HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) (Glycoprotein p43) Length = 391 Score = 43.9 bits (102), Expect = 5e-04 Identities = 24/66 (36%), Positives = 37/66 (56%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 PG LFI + E ++ L F +GR++ + D+ T S+ F FV+++SPA A+ A Sbjct: 7 PG-KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65 Query: 323 ISMMNG 306 MNG Sbjct: 66 ARDMNG 71
>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein| Length = 157 Score = 43.5 bits (101), Expect = 7e-04 Identities = 20/51 (39%), Positives = 29/51 (56%) Frame = -3 Query: 458 DQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMMNG 306 D+ L AF FG + +K+ D+ TG S+ FGFV++ + AI MNG Sbjct: 19 DESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNG 69
>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A| Length = 166 Score = 43.5 bits (101), Expect = 7e-04 Identities = 21/51 (41%), Positives = 30/51 (58%) Frame = -3 Query: 458 DQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMMNG 306 D+ L AF +G VL +K+ D+ TG S+ FGFV++ + AI MNG Sbjct: 21 DRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNG 71
>MRD1_USTMA (Q4PC17) Multiple RNA-binding domain-containing protein 1| Length = 858 Score = 43.1 bits (100), Expect = 9e-04 Identities = 24/62 (38%), Positives = 33/62 (53%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LFI ++P ++ F+SFG V + +DK T ASK FVS+ PA A AA Sbjct: 316 LFIRNLPFAASGDEILAFFESFGTVKQVHIPLDKQTKASKGLAFVSFSDPAHALAAYRAK 375 Query: 311 NG 306 +G Sbjct: 376 DG 377
>IF34_CAEEL (Q19706) Probable eukaryotic translation initiation factor 3| subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3g) Length = 256 Score = 43.1 bits (100), Expect = 9e-04 Identities = 21/59 (35%), Positives = 33/59 (55%) Frame = -3 Query: 485 IYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMMN 309 + ++PQE + +L F GRV+ + DK TG K F FV+++S A AI+ +N Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELN 238
>A2BP1_MOUSE (Q9JJ43) Ataxin-2-binding protein 1| Length = 396 Score = 42.7 bits (99), Expect = 0.001 Identities = 34/138 (24%), Positives = 56/138 (40%), Gaps = 14/138 (10%) Frame = -3 Query: 677 SPYPAGPGMQYPG--SYPGGGINSRPYMNSHNSVKVXXXXXXXXXXXXXXXXXX---PQL 513 +P+P P +Y G + PG +N P +H+ Q Sbjct: 43 APHPH-PAPEYTGQTTVPGHTLNLYPPTQTHSEQSADTSAQTVSGTATQTDDAAPTDGQP 101 Query: 512 EGPPGAN---------LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGF 360 + P N L + +IP F D DL F FG++L ++ ++ SK FGF Sbjct: 102 QTQPSENTESKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNER--GSKGFGF 159 Query: 359 VSYDSPAPAQAAISMMNG 306 V++++ A A A ++G Sbjct: 160 VTFENSADADRAREKLHG 177
>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of| activating protein 1 and estrogen receptors) (Coactivator of AP-1 and ERs) (Transcription coactivator CAPER) Length = 530 Score = 42.4 bits (98), Expect = 0.001 Identities = 17/45 (37%), Positives = 29/45 (64%) Frame = -3 Query: 437 FQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMMNGF 303 F+ FGR+ S ++ +D TG SK +GF+++ A+ A+ +NGF Sbjct: 270 FEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGF 314
>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular| carcinoma protein 1) (Splicing factor HCC1) Length = 530 Score = 42.4 bits (98), Expect = 0.001 Identities = 17/45 (37%), Positives = 29/45 (64%) Frame = -3 Query: 437 FQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMMNGF 303 F+ FGR+ S ++ +D TG SK +GF+++ A+ A+ +NGF Sbjct: 270 FEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGF 314
>CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 632 Score = 42.4 bits (98), Expect = 0.001 Identities = 20/63 (31%), Positives = 34/63 (53%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 ++F+ +IP E ++ L F G V+S ++ D+ TG K +GF Y A +A+ Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76 Query: 314 MNG 306 +NG Sbjct: 77 LNG 79
>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)| Length = 142 Score = 42.4 bits (98), Expect = 0.001 Identities = 19/48 (39%), Positives = 31/48 (64%) Frame = -3 Query: 449 LAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMMNG 306 L AF ++G VL +K+ +D+ T S+ FGFV++ + ++AI MNG Sbjct: 3 LHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNG 50
>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 616 Score = 42.4 bits (98), Expect = 0.001 Identities = 20/63 (31%), Positives = 34/63 (53%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 ++F+ +IP E ++ L F G V+S ++ D+ TG K +GF Y A +A+ Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76 Query: 314 MNG 306 +NG Sbjct: 77 LNG 79
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 42.0 bits (97), Expect = 0.002 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSA-KVFVDKATGASKCFGFVSYDSPAPAQAA 324 GAN+F+ ++ E ++ L F +FG +L K+ D +G SK F F+++ S + A Sbjct: 99 GANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTA 158 Query: 323 ISMMNG 306 + MNG Sbjct: 159 LEAMNG 164
>HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 42.0 bits (97), Expect = 0.002 Identities = 23/66 (34%), Positives = 36/66 (54%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 PG LFI + E ++ L F +GR++ + D+ T S+ F FV+++SPA A+ Sbjct: 7 PG-KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDV 65 Query: 323 ISMMNG 306 MNG Sbjct: 66 ARDMNG 71
>CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 42.0 bits (97), Expect = 0.002 Identities = 20/63 (31%), Positives = 34/63 (53%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 ++F+ +IP E ++ L F G V+S ++ D+ TG K +GF Y A +A+ Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76 Query: 314 MNG 306 +NG Sbjct: 77 LNG 79
>CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 42.0 bits (97), Expect = 0.002 Identities = 20/63 (31%), Positives = 34/63 (53%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 ++F+ +IP E ++ L F G V+S ++ D+ TG K +GF Y A +A+ Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76 Query: 314 MNG 306 +NG Sbjct: 77 LNG 79
>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)| Length = 291 Score = 42.0 bits (97), Expect = 0.002 Identities = 22/63 (34%), Positives = 32/63 (50%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LF+ ++P LA F+ G V +V DK TG S+ FGFV+ + +AA Sbjct: 89 LFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQF 148 Query: 311 NGF 303 NG+ Sbjct: 149 NGY 151 Score = 40.8 bits (94), Expect = 0.004 Identities = 21/51 (41%), Positives = 27/51 (52%) Frame = -3 Query: 458 DQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMMNG 306 D L F G V+ AKV D+ +G S+ FGFV+Y S AI +NG Sbjct: 220 DLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNG 270
>CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 572 Score = 42.0 bits (97), Expect = 0.002 Identities = 20/63 (31%), Positives = 34/63 (53%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 ++F+ +IP E ++ L F G V+S ++ D+ TG K +GF Y A +A+ Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76 Query: 314 MNG 306 +NG Sbjct: 77 LNG 79
>CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 580 Score = 42.0 bits (97), Expect = 0.002 Identities = 20/63 (31%), Positives = 34/63 (53%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 ++F+ +IP E ++ L F G V+S ++ D+ TG K +GF Y A +A+ Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76 Query: 314 MNG 306 +NG Sbjct: 77 LNG 79
>A2BP1_HUMAN (Q9NWB1) Ataxin-2-binding protein 1| Length = 397 Score = 42.0 bits (97), Expect = 0.002 Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 15/139 (10%) Frame = -3 Query: 677 SPYPAGPGMQYPG--SYPGGGINSRPYMNSHNSVKVXXXXXXXXXXXXXXXXXXPQLEGP 504 +P+P P +Y G + P +N P +H+ +G Sbjct: 43 APHPH-PAPEYTGQTTVPEHTLNLYPPAQTHSEQSPADTSAQTVSGTATQADDAAPTDGQ 101 Query: 503 PGAN-------------LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFG 363 P L + +IP F D DL F FG++L ++ ++ SK FG Sbjct: 102 PQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNER--GSKGFG 159 Query: 362 FVSYDSPAPAQAAISMMNG 306 FV++++ A A A ++G Sbjct: 160 FVTFENSADADRAREKLHG 178
>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3) (AtRBP33) (RNA-binding protein cp31) Length = 329 Score = 42.0 bits (97), Expect = 0.002 Identities = 20/66 (30%), Positives = 35/66 (53%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 P +++ ++P + + L F G+V+ A+V D+ TG S+ FGFV+ A Sbjct: 242 PAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEA 301 Query: 323 ISMMNG 306 IS ++G Sbjct: 302 ISALDG 307
>PPIL4_ASPFU (Q4WAQ9) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 459 Score = 41.6 bits (96), Expect = 0.003 Identities = 22/67 (32%), Positives = 33/67 (49%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 PP LF+ + D+DL F FG +LS +V DK TG S + F+ +++ + Sbjct: 245 PPENVLFVCKLNPVTQDEDLQLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQ 304 Query: 326 AISMMNG 306 A M G Sbjct: 305 AYFKMQG 311
>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7| Length = 176 Score = 41.6 bits (96), Expect = 0.003 Identities = 20/51 (39%), Positives = 30/51 (58%) Frame = -3 Query: 458 DQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMMNG 306 D+ L AF +G V+ +K+ D+ TG S+ FGFV++ + AI MNG Sbjct: 21 DRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNG 71
>PPIL4_NEUCR (Q871A4) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 494 Score = 41.6 bits (96), Expect = 0.003 Identities = 21/66 (31%), Positives = 34/66 (51%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 PP LF+ + D+DL F FG++LS +V D+ TG S + F+ ++ + Sbjct: 250 PPENVLFVCKLNPVTTDEDLELIFSRFGKILSCEVIRDQKTGDSLQYAFIEFEDKKSCEE 309 Query: 326 AISMMN 309 A S M+ Sbjct: 310 AYSKMD 315
>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)| Length = 279 Score = 41.6 bits (96), Expect = 0.003 Identities = 22/67 (32%), Positives = 32/67 (47%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 P +F+ ++ LA F+ G V +V DK TG S+ FGFV+ S +AA Sbjct: 85 PDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAA 144 Query: 323 ISMMNGF 303 NG+ Sbjct: 145 CQQFNGY 151 Score = 40.0 bits (92), Expect = 0.007 Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Frame = -3 Query: 458 DQD-LAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMMNG 306 DQD L F G+V+ AKV D+ +G S+ FGFV+Y S AI ++G Sbjct: 206 DQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDG 257
>PPIL4_CRYNE (Q5KNY5) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 504 Score = 41.6 bits (96), Expect = 0.003 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDS-PAPAQ 330 PP LF+ + D+DL F FG++LS +V DK +G S + F+ +D A Q Sbjct: 243 PPENILFVCKLNPVTQDEDLELIFSRFGKILSCEVVRDKKSGDSLQYAFIEFDEREAAEQ 302 Query: 329 AAISMMN 309 A M N Sbjct: 303 AYFKMQN 309
>PPIL4_ASPOR (Q2U256) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 461 Score = 41.6 bits (96), Expect = 0.003 Identities = 22/67 (32%), Positives = 33/67 (49%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 PP LF+ + D+DL F FG +LS +V DK TG S + F+ +++ + Sbjct: 245 PPENVLFVCKLNPVTQDEDLHLIFSRFGTILSCEVIRDKRTGDSLQYAFIEFENQKDCEQ 304 Query: 326 AISMMNG 306 A M G Sbjct: 305 AYFKMQG 311
>PPIL4_SCHPO (Q9UUE4) Peptidyl-prolyl cis-trans isomerase cyp6 (EC 5.2.1.8)| (PPIase cyp6) (Rotamase cyp8) Length = 432 Score = 41.6 bits (96), Expect = 0.003 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 PP LF+ + D+DL F FG+++S +V DK TG S + F+ +D+ + Sbjct: 241 PPENVLFVCKLNPVTQDEDLELIFSRFGKIISCQVIRDKETGDSLQYAFIEFDNKESVEK 300 Query: 326 AISMM 312 A M Sbjct: 301 AYFKM 305
>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A| Length = 169 Score = 41.6 bits (96), Expect = 0.003 Identities = 19/51 (37%), Positives = 30/51 (58%) Frame = -3 Query: 458 DQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMMNG 306 ++ L AF FG ++ +K+ D+ TG S+ FGFV++ + AI MNG Sbjct: 21 ERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNG 71
>HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 41.6 bits (96), Expect = 0.003 Identities = 24/66 (36%), Positives = 36/66 (54%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 PG LFI + E ++ L F +GR++ + D+ T S+ F FV+ +SPA A+ A Sbjct: 7 PG-KLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDA 65 Query: 323 ISMMNG 306 MNG Sbjct: 66 ARDMNG 71
>NUCL_CHICK (P15771) Nucleolin (Protein C23)| Length = 694 Score = 41.2 bits (95), Expect = 0.003 Identities = 21/60 (35%), Positives = 36/60 (60%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LF+ + ++ ++ L +F+ +SA++ D+ TG+SK FGFV + SP A+AA M Sbjct: 555 LFVRGLSEDTTEETLRESFEGS---ISARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAM 611
>RBM9_HUMAN (O43251) RNA-binding protein 9 (RNA-binding motif protein 9)| (Hexaribonucleotide-binding protein 2) (Repressor of tamoxifen transcriptional activity) Length = 390 Score = 41.2 bits (95), Expect = 0.003 Identities = 21/62 (33%), Positives = 35/62 (56%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 L + +IP F D DL F FG++L ++ ++ SK FGFV++++ A A A + Sbjct: 123 LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNER--GSKGFGFVTFENSADADRAREKL 180 Query: 311 NG 306 +G Sbjct: 181 HG 182
>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog| Length = 342 Score = 41.2 bits (95), Expect = 0.003 Identities = 20/52 (38%), Positives = 29/52 (55%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAP 336 LF+ I +E + DL F+ +G V+SA + VDK T + F FV +D P Sbjct: 110 LFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDP 161
>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)| Length = 292 Score = 40.8 bits (94), Expect = 0.004 Identities = 21/51 (41%), Positives = 27/51 (52%) Frame = -3 Query: 458 DQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMMNG 306 D L F G V+ AKV D+ +G S+ FGFV+Y S AI +NG Sbjct: 221 DLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNG 271 Score = 40.0 bits (92), Expect = 0.007 Identities = 21/63 (33%), Positives = 32/63 (50%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LF+ ++P LA F+ G V +V DK +G S+ FGFV+ + +AA Sbjct: 90 LFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQF 149 Query: 311 NGF 303 NG+ Sbjct: 150 NGY 152
>MYEF2_HUMAN (Q9P2K5) Myelin expression factor 2 (MyEF-2) (MST156)| Length = 600 Score = 40.8 bits (94), Expect = 0.004 Identities = 23/68 (33%), Positives = 36/68 (52%) Frame = -3 Query: 509 GPPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQ 330 G G +F+ ++P + Q L F G V+ A++ ++ G SK G V +DSP A+ Sbjct: 519 GSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMEN--GKSKGCGTVRFDSPESAE 576 Query: 329 AAISMMNG 306 A +MNG Sbjct: 577 KACRIMNG 584 Score = 34.3 bits (77), Expect = 0.40 Identities = 22/68 (32%), Positives = 34/68 (50%) Frame = -3 Query: 509 GPPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQ 330 G G+ +F+ ++ + G + L F G V A + DK G S+ G V+++ A Sbjct: 229 GRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDK-DGKSRGMGTVTFEQAIEAV 287 Query: 329 AAISMMNG 306 AISM NG Sbjct: 288 QAISMFNG 295
>YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 in chromosome I| Length = 297 Score = 40.8 bits (94), Expect = 0.004 Identities = 20/64 (31%), Positives = 33/64 (51%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G +LF+ I + +L F FG V ++ + T AS+ FGF+S+ + A +AI Sbjct: 100 GNDLFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSAI 159 Query: 320 SMMN 309 +N Sbjct: 160 DNLN 163
>TADBP_HUMAN (Q13148) TAR DNA-binding protein 43 (TDP-43)| Length = 414 Score = 40.4 bits (93), Expect = 0.006 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFV---SYDSPAPAQA 327 ++L + +P + +QDL F +FG VL +V D TG SK FGFV Y++ + Sbjct: 104 SDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMS 163 Query: 326 AISMMNG 306 M++G Sbjct: 164 QRHMIDG 170
>PPIL4_USTMA (P0C196) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 551 Score = 40.4 bits (93), Expect = 0.006 Identities = 22/65 (33%), Positives = 31/65 (47%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 PP LF+ + DL F FG++LS +V DK TG S + F+ +D A+ Sbjct: 259 PPENILFVCKLNPVTRSDDLELIFSRFGKILSCEVIKDKKTGDSLQYAFIEFDKKDDAER 318 Query: 326 AISMM 312 A M Sbjct: 319 AYFKM 323
>RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, chloroplast| precursor (PSRP-2) Length = 260 Score = 40.4 bits (93), Expect = 0.006 Identities = 20/68 (29%), Positives = 35/68 (51%) Frame = -3 Query: 512 EGPPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPA 333 +G L++ +IP+ + +L + G + A+V DK +G S+ FGFV+ + A Sbjct: 79 DGEGARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDA 138 Query: 332 QAAISMMN 309 A I +N Sbjct: 139 NAVIEKLN 146 Score = 36.6 bits (83), Expect = 0.081 Identities = 21/61 (34%), Positives = 32/61 (52%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 ++I ++ + ++ L F G+VL AKV T S FGFVS+ S +AAI + Sbjct: 186 VYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQAL 245 Query: 311 N 309 N Sbjct: 246 N 246
>CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (xCIRP) Length = 163 Score = 40.4 bits (93), Expect = 0.006 Identities = 22/62 (35%), Positives = 34/62 (54%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LFI + E + L AF +GR+ V D+ T S+ FGFV++++ A+ A+ M Sbjct: 7 LFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAM 66 Query: 311 NG 306 NG Sbjct: 67 NG 68
>NUCL_RAT (P13383) Nucleolin (Protein C23)| Length = 712 Score = 40.0 bits (92), Expect = 0.007 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 9/78 (11%) Frame = -3 Query: 518 QLEGP---------PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCF 366 +L+GP P LF+ + ++ ++ L +F+ R A++ D+ TG+SK F Sbjct: 558 ELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFEGSVR---ARIVTDRETGSSKGF 614 Query: 365 GFVSYDSPAPAQAAISMM 312 GFV ++S A+AA M Sbjct: 615 GFVDFNSEEDAKAAKEAM 632
>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) (RNPL) Length = 157 Score = 40.0 bits (92), Expect = 0.007 Identities = 21/62 (33%), Positives = 32/62 (51%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LF+ + +Q L F SFG + V D+ T S+ FGF+++ +P A A+ M Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAM 67 Query: 311 NG 306 NG Sbjct: 68 NG 69
>TADBP_MOUSE (Q921F2) TAR DNA-binding protein 43 (TDP-43)| Length = 414 Score = 40.0 bits (92), Expect = 0.007 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFV---SYDSPAPAQA 327 ++L + +P + +QDL F +FG VL +V D TG SK FGFV Y++ + Sbjct: 104 SDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMS 163 Query: 326 AISMMNG 306 M++G Sbjct: 164 QRHMIDG 170
>CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1| Length = 632 Score = 40.0 bits (92), Expect = 0.007 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQS-FGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 P ++F+ + D DL F+S + SAK+ VD TG S+ +GFV + S Q Sbjct: 180 PEFSIFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQH 239 Query: 326 AISMMNGF 303 A+ M G+ Sbjct: 240 ALMHMQGY 247
>ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core| protein A1-A) (PEN repeat clone P9) Length = 365 Score = 40.0 bits (92), Expect = 0.007 Identities = 16/57 (28%), Positives = 28/57 (49%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 LF+ + + +Q + FQ FG ++ + +DK TG + F FV +D P + Sbjct: 124 LFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVV 180
>NUCL_MESAU (P08199) Nucleolin (Protein C23)| Length = 713 Score = 40.0 bits (92), Expect = 0.007 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 9/78 (11%) Frame = -3 Query: 518 QLEGP---------PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCF 366 +L+GP P LF+ + ++ ++ L +F+ R A++ D+ TG+SK F Sbjct: 555 ELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFEGSVR---ARIVTDRETGSSKGF 611 Query: 365 GFVSYDSPAPAQAAISMM 312 GFV ++S A+AA M Sbjct: 612 GFVDFNSEEDAKAAKEAM 629
>HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4 (Cleavage| factor IB) (CFIB) Length = 534 Score = 39.7 bits (91), Expect = 0.010 Identities = 17/49 (34%), Positives = 30/49 (61%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDS 345 +F+ I + ++ F +G ++ A++ +DK TG S+ FGFV+YDS Sbjct: 245 IFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDS 293 Score = 37.7 bits (86), Expect = 0.036 Identities = 17/57 (29%), Positives = 30/57 (52%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 +FI + + + +L F +G V K+ D ATG S+ FGF+S++ P+ + Sbjct: 161 MFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVV 217
>NGR1_YEAST (P32831) Negative growth regulatory protein NGR1 (RNA-binding| protein RBP1) Length = 672 Score = 39.7 bits (91), Expect = 0.010 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQS-FGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 P +LF+ + + DL FQ+ F V + +V D TG+S+CFGFV + + Sbjct: 190 PEFSLFVGDLSPTATEADLLSLFQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRR 249 Query: 326 AISMMNG 306 A+ M+G Sbjct: 250 ALIEMSG 256
>G3B2_MOUSE (P97379) Ras-GTPase-activating protein-binding protein 2 (GAP| SH3-domain-binding protein 2) (G3BP-2) Length = 482 Score = 39.7 bits (91), Expect = 0.010 Identities = 18/59 (30%), Positives = 28/59 (47%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQ 330 P LF+ ++P + + +L F SFG V+ ++ G FGFV +D P Q Sbjct: 328 PDSHQLFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQ 386
>G3B2_HUMAN (Q9UN86) Ras-GTPase-activating protein-binding protein 2 (GAP| SH3-domain-binding protein 2) (G3BP-2) Length = 482 Score = 39.7 bits (91), Expect = 0.010 Identities = 18/59 (30%), Positives = 28/59 (47%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQ 330 P LF+ ++P + + +L F SFG V+ ++ G FGFV +D P Q Sbjct: 328 PDSHQLFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQ 386
>IF34_MOUSE (Q9Z1D1) Eukaryotic translation initiation factor 3 subunit 4| (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (Eif3p42) (eIF3g) Length = 320 Score = 39.7 bits (91), Expect = 0.010 Identities = 20/65 (30%), Positives = 35/65 (53%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 A + + ++ ++ + DL F+ FG + + DK TG SK F F+S+ A AI+ Sbjct: 239 ATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIA 298 Query: 317 MMNGF 303 ++GF Sbjct: 299 GVSGF 303
>IF34_HUMAN (O75821) Eukaryotic translation initiation factor 3 subunit 4| (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (eIF3g) Length = 320 Score = 39.7 bits (91), Expect = 0.010 Identities = 20/65 (30%), Positives = 35/65 (53%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 A + + ++ ++ + DL F+ FG + + DK TG SK F F+S+ A AI+ Sbjct: 239 ATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIA 298 Query: 317 MMNGF 303 ++GF Sbjct: 299 GVSGF 303
>DRBP1_RAT (Q8CFD1) Developmentally-regulated RNA-binding protein 1| Length = 476 Score = 39.7 bits (91), Expect = 0.010 Identities = 19/52 (36%), Positives = 29/52 (55%) Frame = -3 Query: 476 IPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 IP+ + ++DL F+ +G + V +K TG SK G+V Y P+ A AI Sbjct: 127 IPKSYTEEDLREKFKVYGDIEYCSVIKNKVTGESKGLGYVRYLKPSQAAQAI 178
>PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g36660| (Poly(A)-binding protein At2g36660) (PABP) Length = 609 Score = 39.7 bits (91), Expect = 0.010 Identities = 20/62 (32%), Positives = 34/62 (54%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 N+F+ ++P+ + L F+ FG ++S KV G S+ +GFV ++ A AAI Sbjct: 113 NVFVKNLPESVTNAVLQDMFKKFGNIVSCKV-ATLEDGKSRGYGFVQFEQEDAAHAAIQT 171 Query: 314 MN 309 +N Sbjct: 172 LN 173 Score = 33.9 bits (76), Expect = 0.52 Identities = 16/63 (25%), Positives = 34/63 (53%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 NL++ ++ + + L F FG+++S + D+ + + FV++D+P A+ A Sbjct: 202 NLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDE-NRLCRGYAFVNFDNPEDARRAAET 260 Query: 314 MNG 306 +NG Sbjct: 261 VNG 263
>NUCL_MOUSE (P09405) Nucleolin (Protein C23)| Length = 706 Score = 39.7 bits (91), Expect = 0.010 Identities = 21/64 (32%), Positives = 36/64 (56%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 P LF+ + ++ ++ L +F+ R A++ D+ TG+SK FGFV ++S A+AA Sbjct: 566 PSKTLFVKGLSEDTTEETLKESFEGSVR---ARIVTDRETGSSKGFGFVDFNSEEDAKAA 622 Query: 323 ISMM 312 M Sbjct: 623 KEAM 626
>DRBP1_MOUSE (Q8BHN5) Developmentally-regulated RNA-binding protein 1 (RB-1)| Length = 476 Score = 39.3 bits (90), Expect = 0.012 Identities = 18/52 (34%), Positives = 29/52 (55%) Frame = -3 Query: 476 IPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 IP+ + ++DL F+ +G + + +K TG SK G+V Y P+ A AI Sbjct: 127 IPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAI 178
>DRBP1_HUMAN (Q8IUH3) Developmentally-regulated RNA-binding protein 1 (RB-1)| Length = 476 Score = 39.3 bits (90), Expect = 0.012 Identities = 18/52 (34%), Positives = 29/52 (55%) Frame = -3 Query: 476 IPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 IP+ + ++DL F+ +G + + +K TG SK G+V Y P+ A AI Sbjct: 127 IPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAI 178
>G3BP_MOUSE (P97855) Ras-GTPase-activating protein-binding protein 1 (EC| 3.6.1.-) (ATP-dependent DNA helicase VIII) (GAP SH3-domain-binding protein 1) (G3BP-1) (HDH-VIII) Length = 465 Score = 39.3 bits (90), Expect = 0.012 Identities = 21/63 (33%), Positives = 31/63 (49%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 P LFI ++P E +L FQ+FG V+ ++ + G FGFV +D P Q Sbjct: 335 PDSHQLFIGNLPHEVDKSELKDFFQNFGNVVELRI---NSGGKLPNFGFVVFDDSEPVQK 391 Query: 326 AIS 318 +S Sbjct: 392 VLS 394
>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) Length = 153 Score = 39.3 bits (90), Expect = 0.012 Identities = 21/62 (33%), Positives = 32/62 (51%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LF+ + +Q L F SFG + V D+ T S+ FGF+++ +P A A+ M Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 67 Query: 311 NG 306 NG Sbjct: 68 NG 69
>MK67I_XENLA (Q7SYS2) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| Length = 278 Score = 39.3 bits (90), Expect = 0.012 Identities = 21/67 (31%), Positives = 32/67 (47%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 PG ++I HIP+ + L F FG V ++ K TG SK + +V Y+ A+ Sbjct: 40 PGV-IYIGHIPKSLIEPQLQEYFNQFGTVTRLRLSRSKKTGNSKGYAYVEYECDEVAKIV 98 Query: 323 ISMMNGF 303 MN + Sbjct: 99 ADTMNNY 105
>NUCL_PONPY (Q5RF26) Nucleolin| Length = 711 Score = 39.3 bits (90), Expect = 0.012 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 9/78 (11%) Frame = -3 Query: 518 QLEGP---------PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCF 366 +L+GP P LF+ + ++ ++ L +F R A++ D+ TG+SK F Sbjct: 557 ELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSVR---ARIVTDRETGSSKGF 613 Query: 365 GFVSYDSPAPAQAAISMM 312 GFV ++S A+AA M Sbjct: 614 GFVDFNSEEDAKAAKEAM 631
>NUCL_MACFA (Q4R4J7) Nucleolin| Length = 710 Score = 39.3 bits (90), Expect = 0.012 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 9/78 (11%) Frame = -3 Query: 518 QLEGP---------PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCF 366 +L+GP P LF+ + ++ ++ L +F R A++ D+ TG+SK F Sbjct: 556 ELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSVR---ARIVTDRETGSSKGF 612 Query: 365 GFVSYDSPAPAQAAISMM 312 GFV ++S A+AA M Sbjct: 613 GFVDFNSEEDAKAAKEAM 630
>FOX1_CAEEL (Q10572) Sex determination protein fox-1 (Feminizing locus on X| protein 1) Length = 415 Score = 39.3 bits (90), Expect = 0.012 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Frame = -3 Query: 509 GPPGAN-LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPA 333 GP G L + +IP F D DL F+ FG V ++ ++ SK FGFV+ + P A Sbjct: 148 GPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNER--GSKGFGFVTMERPQDA 205 Query: 332 QAAISMMNG 306 + A ++G Sbjct: 206 ERARQELHG 214
>NUCL_HUMAN (P19338) Nucleolin (Protein C23)| Length = 709 Score = 39.3 bits (90), Expect = 0.012 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 9/78 (11%) Frame = -3 Query: 518 QLEGP---------PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCF 366 +L+GP P LF+ + ++ ++ L +F R A++ D+ TG+SK F Sbjct: 555 ELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSVR---ARIVTDRETGSSKGF 611 Query: 365 GFVSYDSPAPAQAAISMM 312 GFV ++S A+AA M Sbjct: 612 GFVDFNSEEDAKAAKEAM 629
>MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing protein 1| Length = 825 Score = 39.3 bits (90), Expect = 0.012 Identities = 19/64 (29%), Positives = 31/64 (48%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 + LF+ ++P + + DL F FG++ V D + SK F +V Y P A A Sbjct: 301 SRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAYK 360 Query: 317 MMNG 306 ++G Sbjct: 361 ELDG 364
>ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0)| Length = 305 Score = 39.3 bits (90), Expect = 0.012 Identities = 21/66 (31%), Positives = 34/66 (51%) Frame = -3 Query: 515 LEGPPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAP 336 +E LFI + + + L F++FG + V V+ T S+CFGFV+Y + Sbjct: 1 MENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEE 60 Query: 335 AQAAIS 318 A AA++ Sbjct: 61 ADAAMA 66 Score = 37.0 bits (84), Expect = 0.062 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Frame = -3 Query: 503 PGAN-----LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPA 339 PGA+ LF+ + + + DL F FG V A++ DK +G + FGFV + + Sbjct: 91 PGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHD 150 Query: 338 PAQAA 324 A A Sbjct: 151 AADKA 155
>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) Length = 172 Score = 39.3 bits (90), Expect = 0.012 Identities = 19/62 (30%), Positives = 34/62 (54%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LF+ + + +Q L F +G++ V D+ T S+ FGFV++++ A+ A+ M Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 311 NG 306 NG Sbjct: 68 NG 69
>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 39.3 bits (90), Expect = 0.012 Identities = 19/62 (30%), Positives = 34/62 (54%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LF+ + + +Q L F +G++ V D+ T S+ FGFV++++ A+ A+ M Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 311 NG 306 NG Sbjct: 68 NG 69
>G3BP_HUMAN (Q13283) Ras-GTPase-activating protein-binding protein 1 (EC| 3.6.1.-) (ATP-dependent DNA helicase VIII) (GAP SH3-domain-binding protein 1) (G3BP-1) (HDH-VIII) Length = 466 Score = 39.3 bits (90), Expect = 0.012 Identities = 21/63 (33%), Positives = 31/63 (49%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 P LFI ++P E +L FQS+G V+ ++ + G FGFV +D P Q Sbjct: 337 PDSHQLFIGNLPHEVDKSELKDFFQSYGNVVELRI---NSGGKLPNFGFVVFDDSEPVQK 393 Query: 326 AIS 318 +S Sbjct: 394 VLS 396
>PPIL4_MOUSE (Q9CXG3) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) (Cyclophilin-like protein PPIL4) Length = 492 Score = 39.3 bits (90), Expect = 0.012 Identities = 20/66 (30%), Positives = 31/66 (46%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 PP LF+ + D+DL F FG + S +V D TG S C+ F+ ++ + Sbjct: 237 PPENVLFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEK 296 Query: 326 AISMMN 309 A M+ Sbjct: 297 AFFKMD 302
>PPIL4_HUMAN (Q8WUA2) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) (Cyclophilin-like protein PPIL4) Length = 492 Score = 39.3 bits (90), Expect = 0.012 Identities = 20/66 (30%), Positives = 31/66 (46%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 PP LF+ + D+DL F FG + S +V D TG S C+ F+ ++ + Sbjct: 237 PPENVLFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEK 296 Query: 326 AISMMN 309 A M+ Sbjct: 297 AFFKMD 302
>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor| Length = 324 Score = 39.3 bits (90), Expect = 0.012 Identities = 19/61 (31%), Positives = 33/61 (54%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 L++ ++ Q L AF +SAKV D+++G S+ FGF+++ S +A+ M Sbjct: 219 LYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTM 278 Query: 311 N 309 N Sbjct: 279 N 279
>RBM8A_MOUSE (Q9CWZ3) RNA-binding protein 8A (RNA-binding motif protein 8A)| (Ribonucleoprotein RBM8A) Length = 174 Score = 38.9 bits (89), Expect = 0.016 Identities = 18/62 (29%), Positives = 35/62 (56%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LF+ + +E ++D+ F +G + + + +D+ TG K + V Y++ AQAA+ + Sbjct: 75 LFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGL 134 Query: 311 NG 306 NG Sbjct: 135 NG 136
>RBM8A_HUMAN (Q9Y5S9) RNA-binding protein 8A (RNA-binding motif protein 8A)| (Ribonucleoprotein RBM8A) (RNA-binding protein Y14) (Binder of OVCA1-1) (BOV-1) Length = 174 Score = 38.9 bits (89), Expect = 0.016 Identities = 18/62 (29%), Positives = 35/62 (56%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LF+ + +E ++D+ F +G + + + +D+ TG K + V Y++ AQAA+ + Sbjct: 75 LFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGL 134 Query: 311 NG 306 NG Sbjct: 135 NG 136
>YNL0_YEAST (P53927) Hypothetical 25.4 kDa protein in CYB5-LEU4 intergenic| region Length = 220 Score = 38.5 bits (88), Expect = 0.021 Identities = 20/85 (23%), Positives = 39/85 (45%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 +++ +P F +++L+ F FG + ++ +K TG S+ +GF+ + + A A M Sbjct: 93 IYVSRLPHGFHEKELSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDAMIAQESM 152 Query: 311 NGFXXXXXXXXXXXKRDNSKHNKLY 237 N + +K KLY Sbjct: 153 NNYLLMGHLLQVRVLPKGAKIEKLY 177
>SAFB2_HUMAN (Q14151) Scaffold attachment factor B2| Length = 953 Score = 38.5 bits (88), Expect = 0.021 Identities = 18/64 (28%), Positives = 34/64 (53%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G NL++ + DL + F +G+V+ AKV + + ++C+GFV+ + A I Sbjct: 406 GRNLWVSGLSSTTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATKCI 465 Query: 320 SMMN 309 S ++ Sbjct: 466 SHLH 469
>PUF68_DROME (Q8T6B9) Poly U-binding splicing factor half pint (68 kDa poly| U-binding splicing factor) (Protein half pint) (PUF60 homolog) Length = 637 Score = 38.5 bits (88), Expect = 0.021 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 +++ I E + + AF FG + S + D T K F FV Y+ P AQ A+ M Sbjct: 132 VYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 191 Query: 311 NG 306 NG Sbjct: 192 NG 193 Score = 35.8 bits (81), Expect = 0.14 Identities = 16/63 (25%), Positives = 32/63 (50%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 +++ I + ++D+ F++FG +L K+ + K +GF+ Y + AI+ M Sbjct: 229 IYVASIHPDLSEEDIKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASM 288 Query: 311 NGF 303 N F Sbjct: 289 NLF 291
>RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA| Length = 101 Score = 38.5 bits (88), Expect = 0.021 Identities = 17/63 (26%), Positives = 34/63 (53%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 ++++ ++ + + DL F +G V ++ D+ TG + FGFV ++ A AAI Sbjct: 2 SIYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEA 61 Query: 314 MNG 306 ++G Sbjct: 62 LDG 64
>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 38.5 bits (88), Expect = 0.021 Identities = 19/62 (30%), Positives = 34/62 (54%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LF+ + + +Q L F +G++ V D+ T S+ FGFV++++ A+ A+ M Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 311 NG 306 NG Sbjct: 68 NG 69
>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 38.5 bits (88), Expect = 0.021 Identities = 19/62 (30%), Positives = 34/62 (54%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LF+ + + +Q L F +G++ V D+ T S+ FGFV++++ A+ A+ M Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 311 NG 306 NG Sbjct: 68 NG 69
>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 38.5 bits (88), Expect = 0.021 Identities = 19/62 (30%), Positives = 34/62 (54%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LF+ + + +Q L F +G++ V D+ T S+ FGFV++++ A+ A+ M Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 311 NG 306 NG Sbjct: 68 NG 69
>MK67I_XENTR (Q6GL69) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| Length = 276 Score = 37.7 bits (86), Expect = 0.036 Identities = 20/67 (29%), Positives = 32/67 (47%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 PG ++I HIP+ + L F FG V ++ K TG SK + +V ++ A+ Sbjct: 40 PGV-IYIGHIPRALYEPQLREYFSQFGTVTRLRLSRSKKTGNSKGYAYVEFECDEVAKIV 98 Query: 323 ISMMNGF 303 MN + Sbjct: 99 ADTMNNY 105
>DND1_HUMAN (Q8IYX4) Dead end protein homolog 1 (RNA-binding motif,| single-stranded interacting protein 4) Length = 353 Score = 37.7 bits (86), Expect = 0.036 Identities = 20/66 (30%), Positives = 36/66 (54%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 P G+ +FI +PQ+ + L FQ GR+ ++ + +G ++ F + Y S AQA Sbjct: 55 PAGSEVFIGRLPQDVYEHQLIPLFQRVGRLYEFRLMM-TFSGLNRGFAYARYSSRRGAQA 113 Query: 326 AISMMN 309 AI+ ++ Sbjct: 114 AIATLH 119
>CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcription| termination factor ctf1) Length = 363 Score = 37.7 bits (86), Expect = 0.036 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVS-YDSPAPAQAA 324 G +F+ +IP + +Q + F G V + K+ +D TG+ K +GF +DS A A Sbjct: 6 GNVVFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETTAMAV 65 Query: 323 ISMMN 309 + N Sbjct: 66 RKLNN 70
>HNRPM_RAT (Q62826) Heterogeneous nuclear ribonucleoprotein M (hnRNP M) (M4| protein) Length = 689 Score = 37.7 bits (86), Expect = 0.036 Identities = 22/62 (35%), Positives = 34/62 (54%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 +F+ ++P +F + L F G VL A + ++ G SK G V ++SP A+ A MM Sbjct: 614 IFVRNLPFDFTWKMLKDKFNECGHVLYADIKMEN--GKSKGCGVVKFESPEVAERACRMM 671 Query: 311 NG 306 NG Sbjct: 672 NG 673 Score = 37.4 bits (85), Expect = 0.047 Identities = 23/71 (32%), Positives = 36/71 (50%) Frame = -3 Query: 518 QLEGPPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPA 339 Q G G+ +F+ ++ + G + L F G V+ A + DK G S+ G V+++ Sbjct: 156 QKAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK-DGKSRGIGTVTFEQSI 214 Query: 338 PAQAAISMMNG 306 A AISM NG Sbjct: 215 EAVQAISMFNG 225
>HNRPM_HUMAN (P52272) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)| Length = 729 Score = 37.7 bits (86), Expect = 0.036 Identities = 22/62 (35%), Positives = 34/62 (54%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 +F+ ++P +F + L F G VL A + ++ G SK G V ++SP A+ A MM Sbjct: 654 IFVRNLPFDFTWKMLKDKFNECGHVLYADIKMEN--GKSKGCGVVKFESPEVAERACRMM 711 Query: 311 NG 306 NG Sbjct: 712 NG 713 Score = 36.6 bits (83), Expect = 0.081 Identities = 22/68 (32%), Positives = 35/68 (51%) Frame = -3 Query: 509 GPPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQ 330 G G+ +F+ ++ + G + L F G V+ A + DK G S+ G V+++ A Sbjct: 199 GRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK-DGKSRGIGTVTFEQSIEAV 257 Query: 329 AAISMMNG 306 AISM NG Sbjct: 258 QAISMFNG 265
>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA| binding protein SEB4) (CLL-associated antigen KW-5) Length = 216 Score = 37.7 bits (86), Expect = 0.036 Identities = 19/56 (33%), Positives = 29/56 (51%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 +F+ +P D L F+ FG + A V D+ TG S+ +GFV+ A A+ A Sbjct: 13 IFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERA 68
>HNRPM_MOUSE (Q9D0E1) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)| Length = 728 Score = 37.7 bits (86), Expect = 0.036 Identities = 22/62 (35%), Positives = 34/62 (54%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 +F+ ++P +F + L F G VL A + ++ G SK G V ++SP A+ A MM Sbjct: 653 IFVRNLPFDFTWKMLKDKFNECGHVLYADIKMEN--GKSKGCGVVKFESPEVAERACRMM 710 Query: 311 NG 306 NG Sbjct: 711 NG 712 Score = 37.4 bits (85), Expect = 0.047 Identities = 22/68 (32%), Positives = 35/68 (51%) Frame = -3 Query: 509 GPPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQ 330 G G+ +F+ ++ + G + L F G V+ A + DK G S+ G V+++ A Sbjct: 198 GRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK-DGKSRGIGIVTFEQSIEAV 256 Query: 329 AAISMMNG 306 AISM NG Sbjct: 257 QAISMFNG 264
>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 960 Score = 37.4 bits (85), Expect = 0.047 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 3/72 (4%) Frame = -3 Query: 512 EGPPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGA---SKCFGFVSYDSP 342 E PG LFI ++ + ++ L F G V S + K S FGFV Y P Sbjct: 725 ESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKP 784 Query: 341 APAQAAISMMNG 306 AQ A+ + G Sbjct: 785 EQAQKALKQLQG 796 Score = 33.1 bits (74), Expect = 0.89 Identities = 17/62 (27%), Positives = 30/62 (48%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LF+ ++P ++DL F +G + +D T K F F+++ P A A S + Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEV 463 Query: 311 NG 306 +G Sbjct: 464 DG 465
>RB97D_DROME (Q02926) Ribonucleoprotein RB97D| Length = 471 Score = 37.4 bits (85), Expect = 0.047 Identities = 19/57 (33%), Positives = 27/57 (47%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 LF+ + ++ L F FG V+S K+ DK TG + F FV +D AI Sbjct: 125 LFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181
>DND1_XENLA (Q6DCB7) Dead end protein homolog 1| Length = 371 Score = 37.4 bits (85), Expect = 0.047 Identities = 21/66 (31%), Positives = 36/66 (54%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G+ +FI IPQ+ + L FQS G++ ++ + +G ++ F + Y S A +AI Sbjct: 76 GSEVFIGKIPQDIYEDKLIPLFQSVGKLYEFRLMM-TFSGLNRGFAYARYISRRQAISAI 134 Query: 320 SMMNGF 303 +NGF Sbjct: 135 MSLNGF 140
>RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F (HRP36.1| protein) (Protein P11) Length = 385 Score = 37.0 bits (84), Expect = 0.062 Identities = 16/57 (28%), Positives = 29/57 (50%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 LF+ + + ++ L F+ FG+++S + DK TG + F F+ +D P I Sbjct: 117 LFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKII 173
>MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 37.0 bits (84), Expect = 0.062 Identities = 15/37 (40%), Positives = 24/37 (64%) Frame = -3 Query: 455 QDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDS 345 +D+ H F+ FG+V A + DK T + FGFV+++S Sbjct: 123 EDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFES 159
>MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 37.0 bits (84), Expect = 0.062 Identities = 15/37 (40%), Positives = 24/37 (64%) Frame = -3 Query: 455 QDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDS 345 +D+ H F+ FG+V A + DK T + FGFV+++S Sbjct: 123 EDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFES 159
>MK67I_HUMAN (Q9BYG3) MKI67 FHA domain-interacting nucleolar phosphoprotein| (Nucleolar protein interacting with the FHA domain of pKI-67) (hNIFK) (Nucleolar phosphoprotein Nopp34) Length = 293 Score = 37.0 bits (84), Expect = 0.062 Identities = 19/67 (28%), Positives = 32/67 (47%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 PG +++ H+P + + F FG V ++ K TG SK + FV ++S A+ Sbjct: 44 PGV-VYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESEDVAKIV 102 Query: 323 ISMMNGF 303 MN + Sbjct: 103 AETMNNY 109
>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein| 23) (RNA-binding region-containing protein 4) (Splicing factor SF2) Length = 439 Score = 37.0 bits (84), Expect = 0.062 Identities = 15/45 (33%), Positives = 27/45 (60%) Frame = -3 Query: 437 FQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMMNGF 303 F+ FG++ + + D TG SK +GF+++ A+ A+ +NGF Sbjct: 283 FEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGF 327
>NUCL_XENLA (P20397) Nucleolin (Protein C23)| Length = 650 Score = 37.0 bits (84), Expect = 0.062 Identities = 20/60 (33%), Positives = 34/60 (56%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LF+ + ++ ++ L AF ++A++ D+ TGASK FGFV + + A+AA M Sbjct: 504 LFVRGLSEDTTEETLKEAFDGS---VNARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAM 560
>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding| protein SEB4) Length = 237 Score = 37.0 bits (84), Expect = 0.062 Identities = 19/56 (33%), Positives = 28/56 (50%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 +F+ +P D L F+ FG + A V D+ TG S+ +GFV+ A A A Sbjct: 34 IFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRA 89
>NAM8_YEAST (Q00539) Protein NAM8| Length = 523 Score = 37.0 bits (84), Expect = 0.062 Identities = 23/68 (33%), Positives = 32/68 (47%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 P +FI + + +L FQ FG ++ K+ V KC GFV Y A+A Sbjct: 310 PNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPV------GKCCGFVQYVDRLSAEA 363 Query: 326 AISMMNGF 303 AI+ M GF Sbjct: 364 AIAGMQGF 371 Score = 32.0 bits (71), Expect = 2.0 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = -3 Query: 410 AKVFVDKATGASKCFGFVSYDSPAPAQAAISMMNG 306 AK+ D+ TG SK +GFV + + Q A+S M G Sbjct: 193 AKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQG 227
>SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2| Length = 991 Score = 37.0 bits (84), Expect = 0.062 Identities = 18/64 (28%), Positives = 32/64 (50%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G NL++ + DL F G+V+ AKV + + ++C+GFV+ + A I Sbjct: 450 GRNLWVSGLSSSTRAADLKSLFSKHGKVIGAKVVTNARSPGARCYGFVTMSTSDEATKCI 509 Query: 320 SMMN 309 S ++ Sbjct: 510 SHLH 513
>NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NOP77)| Length = 685 Score = 37.0 bits (84), Expect = 0.062 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 9/72 (12%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSP--------- 342 ++F+ ++P + ++ LA F FG V A +DK+TG +K FV++ Sbjct: 291 SVFVRNVPYDATEESLAPHFSKFGSVKYALPVIDKSTGLAKGTAFVAFKDQYTYNECIKN 350 Query: 341 APAQAAISMMNG 306 APA + S++ G Sbjct: 351 APAAGSTSLLIG 362 Score = 33.5 bits (75), Expect = 0.68 Identities = 19/47 (40%), Positives = 26/47 (55%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSY 351 LF+ IPQ+ D+ LA F +F + A V V S+ FGFVS+ Sbjct: 28 LFVRSIPQDVTDEQLADFFSNFAPIKHA-VVVKDTNKRSRGFGFVSF 73
>DND1_MOUSE (Q6VY05) Dead end protein homolog 1 (RNA-binding motif,| single-stranded interacting protein 4) Length = 352 Score = 36.6 bits (83), Expect = 0.081 Identities = 19/66 (28%), Positives = 36/66 (54%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 P G+ ++I +PQ+ + L FQ GR+ ++ + +G ++ F + Y S AQA Sbjct: 55 PSGSEVYIGRLPQDVYEHQLIPLFQRVGRLYEFRLMM-TFSGLNRGFAYARYSSRRGAQA 113 Query: 326 AISMMN 309 AI+ ++ Sbjct: 114 AIATLH 119
>SGN1_YEAST (P40561) RNA-binding protein SGN1| Length = 250 Score = 36.2 bits (82), Expect = 0.11 Identities = 14/63 (22%), Positives = 34/63 (53%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 ++F+ +I + + + F+ G++ + D+ TG K +G++ ++SPA + A+ + Sbjct: 65 SIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKALQL 124 Query: 314 MNG 306 G Sbjct: 125 NGG 127
>SAFB1_HUMAN (Q15424) Scaffold attachment factor B (Scaffold attachment factor| B1) (SAF-B) (HSP27 estrogen response element-TATA box-binding protein) (HSP27 ERE-TATA-binding protein) Length = 915 Score = 36.2 bits (82), Expect = 0.11 Identities = 16/64 (25%), Positives = 33/64 (51%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G N ++ + DL + F +G+V+ AKV + + ++C+GFV+ + A I Sbjct: 405 GRNFWVSGLSSTTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCI 464 Query: 320 SMMN 309 + ++ Sbjct: 465 NHLH 468
>SAFB1_RAT (O88453) Scaffold attachment factor B (Scaffold attachment factor| B1) (SAF-B) Length = 931 Score = 35.8 bits (81), Expect = 0.14 Identities = 16/64 (25%), Positives = 33/64 (51%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 G N ++ + DL + F +G+V+ AKV + + ++C+GFV+ + A I Sbjct: 427 GRNFWVSGLSSTTRATDLKNLFSRYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCI 486 Query: 320 SMMN 309 + ++ Sbjct: 487 NHLH 490
>ARP2_PLAFA (P13824) Clustered-asparagine-rich protein (CARP)| Length = 443 Score = 35.4 bits (80), Expect = 0.18 Identities = 17/39 (43%), Positives = 23/39 (58%) Frame = -3 Query: 419 VLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMMNGF 303 +L + F + G + FGFVSYD+ AQ AI MNG+ Sbjct: 383 ILYHQKFKETVLGRNSGFGFVSYDNVISAQHAIQFMNGY 421
>RSD1_SCHPO (O13845) RNA-binding protein rsd1| Length = 604 Score = 35.4 bits (80), Expect = 0.18 Identities = 21/67 (31%), Positives = 33/67 (49%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 P L + +I D+D+ F+ FG + + D SK FG++ Y +P A+ A Sbjct: 338 PFHRLCVSNIHFNLTDEDVKAIFEPFGDIEFVHLQRDDQN-RSKGFGYIQYRNPISARNA 396 Query: 323 ISMMNGF 303 + MNGF Sbjct: 397 LEKMNGF 403
>MRD1_EMENI (Q5BGA9) Multiple RNA-binding domain-containing protein 1| Length = 819 Score = 35.4 bits (80), Expect = 0.18 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 5/70 (7%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFV-----DKATGASKCFGFVSYDSPAPA 333 A LFI ++ +Q L AF+ +SA++ + S FGF + + A A Sbjct: 592 ATLFIKNLNFSTTNQSLIEAFRPLDGFVSARIKTKPDPKNPGQTLSMGFGFADFKTKAQA 651 Query: 332 QAAISMMNGF 303 QAA+++MNG+ Sbjct: 652 QAALAVMNGY 661 Score = 34.7 bits (78), Expect = 0.31 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 A LF+ ++ E + +L F FG++ V D SK F +V Y P A A Sbjct: 295 ARLFVRNLSYETKESELEPVFSPFGKIEEIHVAFDTRFTTSKGFAYVQYADPDAAVEAYR 354 Query: 317 MMNG 306 ++G Sbjct: 355 NLDG 358
>U2AF2_MOUSE (P26369) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor| 65 kDa subunit) (U2 snRNP auxiliary factor large subunit) Length = 475 Score = 35.4 bits (80), Expect = 0.18 Identities = 20/62 (32%), Positives = 28/62 (45%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LFI +P D + SFG + + + D ATG SK + F Y AI+ + Sbjct: 261 LFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGL 320 Query: 311 NG 306 NG Sbjct: 321 NG 322
>U2AF2_HUMAN (P26368) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor| 65 kDa subunit) (U2 snRNP auxiliary factor large subunit) (hU2AF(65)) Length = 475 Score = 35.4 bits (80), Expect = 0.18 Identities = 20/62 (32%), Positives = 28/62 (45%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LFI +P D + SFG + + + D ATG SK + F Y AI+ + Sbjct: 261 LFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGL 320 Query: 311 NG 306 NG Sbjct: 321 NG 322
>RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 952 Score = 35.4 bits (80), Expect = 0.18 Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 3/72 (4%) Frame = -3 Query: 512 EGPPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGA---SKCFGFVSYDSP 342 E PG LFI ++ ++ L F G + S + K S FGFV Y P Sbjct: 717 ESIPGCTLFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKP 776 Query: 341 APAQAAISMMNG 306 AQ A+ + G Sbjct: 777 EQAQKALKQLQG 788 Score = 30.4 bits (67), Expect = 5.8 Identities = 16/62 (25%), Positives = 30/62 (48%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LF+ ++ ++DL F ++G + +D T K F FV++ P A A + + Sbjct: 402 LFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEV 461 Query: 311 NG 306 +G Sbjct: 462 DG 463
>U2AF2_DROME (Q24562) Splicing factor U2AF 50 kDa subunit (U2 auxiliary factor| 50 kDa subunit) (U2 snRNP auxiliary factor large subunit) Length = 416 Score = 35.0 bits (79), Expect = 0.24 Identities = 18/62 (29%), Positives = 30/62 (48%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 +FI +P D + SFG++ + + D ATG SK + F Y + +I+ + Sbjct: 209 IFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGYAFCEYVDLSITDQSIAGL 268 Query: 311 NG 306 NG Sbjct: 269 NG 270
>RU17_YEAST (Q00916) U1 small nuclear ribonucleoprotein 70 kDa homolog| Length = 300 Score = 35.0 bits (79), Expect = 0.24 Identities = 16/60 (26%), Positives = 29/60 (48%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 P +FI +P + + +L F FG + ++ DK T SK + F+ + P ++ A Sbjct: 105 PYRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMA 164
>ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1| Length = 346 Score = 34.7 bits (78), Expect = 0.31 Identities = 14/48 (29%), Positives = 28/48 (58%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYD 348 L++ + ++ + L F +G V +++ +DKAT + FGFV++D Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFD 163
>IF34_SCHPO (P78795) Probable eukaryotic translation initiation factor 3| RNA-binding subunit (eIF-3 RNA-binding subunit) (eIF3 p33) (Translation initiation factor eIF3, p33 subunit) Length = 282 Score = 34.3 bits (77), Expect = 0.40 Identities = 20/70 (28%), Positives = 34/70 (48%) Frame = -3 Query: 512 EGPPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPA 333 E A L + ++ + +++L F+ FG + + DK TG +K F FVSY A Sbjct: 197 ERDDSATLRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRDCA 256 Query: 332 QAAISMMNGF 303 A ++G+ Sbjct: 257 IKARDRLDGY 266
>MYEF2_MOUSE (Q8C854) Myelin expression factor 2 (MyEF-2) (MEF-2)| Length = 591 Score = 34.3 bits (77), Expect = 0.40 Identities = 22/68 (32%), Positives = 34/68 (50%) Frame = -3 Query: 509 GPPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQ 330 G G+ +F+ ++ + G + L F G V A + DK G S+ G V+++ A Sbjct: 220 GRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDK-DGKSRGMGTVTFEQAIEAV 278 Query: 329 AAISMMNG 306 AISM NG Sbjct: 279 QAISMFNG 286
>RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 427 Score = 33.9 bits (76), Expect = 0.52 Identities = 16/68 (23%), Positives = 29/68 (42%) Frame = -3 Query: 509 GPPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQ 330 G P LF+ + E + + F+S+G + + D+ T K + F+ Y + Sbjct: 134 GDPYKTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMK 193 Query: 329 AAISMMNG 306 AA +G Sbjct: 194 AAYKQADG 201
>PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 301 Score = 33.9 bits (76), Expect = 0.52 Identities = 19/61 (31%), Positives = 31/61 (50%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 L++ + +E D+ L AF FG + ++ +D T + F FV ++ A AAI M Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67 Query: 311 N 309 N Sbjct: 68 N 68
>PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 301 Score = 33.9 bits (76), Expect = 0.52 Identities = 19/61 (31%), Positives = 31/61 (50%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 L++ + +E D+ L AF FG + ++ +D T + F FV ++ A AAI M Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67 Query: 311 N 309 N Sbjct: 68 N 68
>MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 33.9 bits (76), Expect = 0.52 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = -3 Query: 455 QDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDS 345 +D+ F+ FG+V A + DK T + FGFV+++S Sbjct: 123 EDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFES 159
>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 406 Score = 33.9 bits (76), Expect = 0.52 Identities = 15/59 (25%), Positives = 28/59 (47%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 +F+ IP G+ +L F+ FG V + D + FGF++++ A++M Sbjct: 115 IFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 173
>YQO1_CAEEL (Q09293) Putative RNA-binding protein EEED8.1| Length = 367 Score = 33.9 bits (76), Expect = 0.52 Identities = 21/63 (33%), Positives = 32/63 (50%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 A I +IP+ + D +L H FQ+FG+V +V V ++ GFV+ S A A Sbjct: 13 AGFHIRNIPKAWNDWNLFHVFQNFGKVSYCRV-VGQSNDGQVQLGFVNMMSVADADEVRK 71 Query: 317 MMN 309 +N Sbjct: 72 NLN 74
>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 407 Score = 33.9 bits (76), Expect = 0.52 Identities = 15/59 (25%), Positives = 28/59 (47%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 +F+ IP G+ +L F+ FG V + D + FGF++++ A++M Sbjct: 115 IFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 173
>RBM4B_RAT (Q64LC9) RNA-binding protein 4B (RNA-binding motif protein 4B)| (RNA-binding protein 30) (RNA-binding motif protein 30) (Zinc-responsive protein ZD7) Length = 357 Score = 33.5 bits (75), Expect = 0.68 Identities = 19/80 (23%), Positives = 37/80 (46%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LFI ++P+E +Q++ F+ +G+VL + K +GFV + A+ AI + Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII--------KNYGFVHIEDKTAAEDAIRNL 55 Query: 311 NGFXXXXXXXXXXXKRDNSK 252 + + ++ SK Sbjct: 56 HHYKLHGVNINVEASKNKSK 75
>RBM4B_MOUSE (Q8VE92) RNA-binding protein 4B (RNA-binding motif protein 4B)| (RNA-binding protein 30) (RNA-binding motif protein 30) Length = 357 Score = 33.5 bits (75), Expect = 0.68 Identities = 19/80 (23%), Positives = 37/80 (46%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LFI ++P+E +Q++ F+ +G+VL + K +GFV + A+ AI + Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII--------KNYGFVHIEDKTAAEDAIRNL 55 Query: 311 NGFXXXXXXXXXXXKRDNSK 252 + + ++ SK Sbjct: 56 HHYKLHGVNINVEASKNKSK 75
>RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 homolog 2| (hnRNP A3(B)) Length = 385 Score = 33.5 bits (75), Expect = 0.68 Identities = 19/58 (32%), Positives = 28/58 (48%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 LFI + E D L F+ +G++ V D T S+ FGFV+Y A++S Sbjct: 29 LFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMS 86
>RBM4_HUMAN (Q9BWF3) RNA-binding protein 4 (RNA-binding motif protein 4)| (RNA-binding motif protein 4a) (Lark homolog) (hLark) Length = 364 Score = 33.5 bits (75), Expect = 0.68 Identities = 19/80 (23%), Positives = 37/80 (46%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LFI ++P+E +Q++ F+ +G+VL + K +GFV + A+ AI + Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII--------KNYGFVHIEDKTAAEDAIRNL 55 Query: 311 NGFXXXXXXXXXXXKRDNSK 252 + + ++ SK Sbjct: 56 HHYKLHGVNINVEASKNKSK 75
>RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 homolog 1| (hnRNP A3(A)) Length = 373 Score = 33.5 bits (75), Expect = 0.68 Identities = 19/58 (32%), Positives = 28/58 (48%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 LFI + E D L F+ +G++ V D T S+ FGFV+Y A++S Sbjct: 29 LFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMS 86 Score = 31.2 bits (69), Expect = 3.4 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 5/57 (8%) Frame = -3 Query: 503 PGANL-----FIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYD 348 PGA+L F+ I ++ + L +S+G++ + +V D+ +G + F FV++D Sbjct: 111 PGAHLTVKKIFVGGIKEDTEEYHLRDYSESYGKIETIEVMEDRQSGKKRGFAFVTFD 167
>RBM4_RABIT (Q9BDY9) RNA-binding protein 4 (RNA-binding motif protein 4) (Lark| homolog) Length = 359 Score = 33.5 bits (75), Expect = 0.68 Identities = 19/80 (23%), Positives = 37/80 (46%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LFI ++P+E +Q++ F+ +G+VL + K +GFV + A+ AI + Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII--------KNYGFVHIEDKTAAEDAIRNL 55 Query: 311 NGFXXXXXXXXXXXKRDNSK 252 + + ++ SK Sbjct: 56 HHYKLHGVNINVEASKNKSK 75
>RBM4B_HUMAN (Q9BQ04) RNA-binding protein 4B (RNA-binding motif protein 4B)| (RNA-binding protein 30) (RNA-binding motif protein 30) Length = 359 Score = 33.5 bits (75), Expect = 0.68 Identities = 19/80 (23%), Positives = 37/80 (46%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LFI ++P+E +Q++ F+ +G+VL + K +GFV + A+ AI + Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII--------KNYGFVHIEDKTAAEDAIRNL 55 Query: 311 NGFXXXXXXXXXXXKRDNSK 252 + + ++ SK Sbjct: 56 HHYKLHGVNINVEASKNKSK 75
>RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, family 1 member| A1 (RNA-binding motif protein 1) Length = 496 Score = 33.5 bits (75), Expect = 0.68 Identities = 21/66 (31%), Positives = 35/66 (53%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 PG LFI + +E ++ L F G + + D+ T S+ F F+++++PA A+ A Sbjct: 7 PG-KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADAKNA 64 Query: 323 ISMMNG 306 MNG Sbjct: 65 AKDMNG 70
>FUSIP_MOUSE (Q9R0U0) FUS-interacting serine-arginine-rich protein 1| (TLS-associated protein with Ser-Arg repeats) (TLS-associated protein with SR repeats) (TASR) (TLS-associated serine-arginine protein) (TLS-associated SR protein) (Neural-specific SR pro Length = 262 Score = 33.5 bits (75), Expect = 0.68 Identities = 15/62 (24%), Positives = 31/62 (50%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 PP +LF+ ++ + +DL F +G ++ V +D T + F +V ++ A+ Sbjct: 7 PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66 Query: 326 AI 321 A+ Sbjct: 67 AL 68
>FUSIP_HUMAN (O75494) FUS-interacting serine-arginine-rich protein 1| (TLS-associated protein with Ser-Arg repeats) (TLS-associated protein with SR repeats) (TASR) (TLS-associated serine-arginine protein) (TLS-associated SR protein) (40 kDa SR-repressor pr Length = 262 Score = 33.5 bits (75), Expect = 0.68 Identities = 15/62 (24%), Positives = 31/62 (50%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 PP +LF+ ++ + +DL F +G ++ V +D T + F +V ++ A+ Sbjct: 7 PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66 Query: 326 AI 321 A+ Sbjct: 67 AL 68
>SRR35_HUMAN (Q8WXF0) 35 kDa SR repressor protein (SRrp35)| Length = 261 Score = 33.5 bits (75), Expect = 0.68 Identities = 16/66 (24%), Positives = 32/66 (48%) Frame = -3 Query: 506 PPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQA 327 PP +LFI ++ +DL F +G ++ + +D T + F +V ++ A+ Sbjct: 7 PPNTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAED 66 Query: 326 AISMMN 309 A+ +N Sbjct: 67 ALYNLN 72
>RBM4_BOVIN (Q3MHX3) RNA-binding protein 4 (RNA-binding motif protein 4)| (RNA-binding motif protein 4a) Length = 362 Score = 33.5 bits (75), Expect = 0.68 Identities = 19/80 (23%), Positives = 37/80 (46%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LFI ++P+E +Q++ F+ +G+VL + K +GFV + A+ AI + Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII--------KNYGFVHIEDKTAAEDAIRNL 55 Query: 311 NGFXXXXXXXXXXXKRDNSK 252 + + ++ SK Sbjct: 56 HHYKLHGVNINVEASKNKSK 75
>ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (APOBEC-1-binding protein 1) (ABBP-1) Length = 331 Score = 33.5 bits (75), Expect = 0.68 Identities = 15/57 (26%), Positives = 28/57 (49%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 +F+ + + +DL F FG V+ + +D TG S+ FGF+ + A + + Sbjct: 70 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVL 126
>NAB3_YEAST (P38996) Nuclear polyadenylated RNA-binding protein 3| Length = 802 Score = 33.5 bits (75), Expect = 0.68 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = -3 Query: 506 PPGANLFIYHIP-QEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQ 330 PP + LFI ++P + +DL F +G ++ + FGF+ +D+P + Sbjct: 327 PPKSRLFIGNLPLKNVSKEDLFRIFSPYGHIMQINI--------KNAFGFIQFDNPQSVR 378 Query: 329 AAI 321 AI Sbjct: 379 DAI 381
>RBM4_MOUSE (Q8C7Q4) RNA-binding protein 4 (RNA-binding motif protein 4)| (RNA-binding motif protein 4a) (Lark homolog) (mLark) Length = 361 Score = 33.5 bits (75), Expect = 0.68 Identities = 19/80 (23%), Positives = 37/80 (46%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LFI ++P+E +Q++ F+ +G+VL + K +GFV + A+ AI + Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII--------KNYGFVHIEDKTAAEDAIRNL 55 Query: 311 NGFXXXXXXXXXXXKRDNSK 252 + + ++ SK Sbjct: 56 HHYKLHGVNINVEASKNKSK 75
>TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)| Length = 281 Score = 33.1 bits (74), Expect = 0.89 Identities = 17/66 (25%), Positives = 31/66 (46%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 P L ++ + ++DL F +G + V D+ TG S+ F FV ++ ++ A Sbjct: 115 PNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEA 174 Query: 323 ISMMNG 306 + NG Sbjct: 175 MERANG 180
>TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)| Length = 282 Score = 33.1 bits (74), Expect = 0.89 Identities = 17/66 (25%), Positives = 31/66 (46%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 P L ++ + ++DL F +G + V D+ TG S+ F FV ++ ++ A Sbjct: 117 PNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEA 176 Query: 323 ISMMNG 306 + NG Sbjct: 177 MERANG 182
>MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 346 Score = 33.1 bits (74), Expect = 0.89 Identities = 13/37 (35%), Positives = 23/37 (62%) Frame = -3 Query: 455 QDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDS 345 +D+ F+ FG+V A + DK T + FGFV++++ Sbjct: 124 EDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFEN 160 Score = 31.6 bits (70), Expect = 2.6 Identities = 18/55 (32%), Positives = 25/55 (45%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPA 339 PG +FI + + L F FG + V D T S+ FGFV++ PA Sbjct: 20 PG-KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPA 73
>MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 328 Score = 33.1 bits (74), Expect = 0.89 Identities = 13/37 (35%), Positives = 23/37 (62%) Frame = -3 Query: 455 QDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDS 345 +D+ F+ FG+V A + DK T + FGFV++++ Sbjct: 124 EDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFEN 160 Score = 31.6 bits (70), Expect = 2.6 Identities = 18/55 (32%), Positives = 25/55 (45%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPA 339 PG +FI + + L F FG + V D T S+ FGFV++ PA Sbjct: 20 PG-KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPA 73
>FCA_ARATH (O04425) Flowering time control protein FCA| Length = 747 Score = 32.7 bits (73), Expect = 1.2 Identities = 19/62 (30%), Positives = 31/62 (50%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LF+ + ++ ++++ F FG V + D+ + C GFV Y S A AAI + Sbjct: 213 LFVGSLNKQATEKEVEEIFLQFGHVEDVYLMRDEYRQSRGC-GFVKYSSKETAMAAIDGL 271 Query: 311 NG 306 NG Sbjct: 272 NG 273
>RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C (Hrb27-C)| (hnRNP 48) (HRP48.1) Length = 421 Score = 32.7 bits (73), Expect = 1.2 Identities = 14/57 (24%), Positives = 28/57 (49%) Frame = -3 Query: 500 GANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQ 330 G +F+ +P + DL F +G+V + D+ S+ FGF+S++ + + Sbjct: 95 GYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVE 151
>RSP6_CAEEL (Q18409) Probable splicing factor, arginine/serine-rich 6| (RNA-binding protein srp-1) (CeSRp20) Length = 179 Score = 32.3 bits (72), Expect = 1.5 Identities = 19/64 (29%), Positives = 32/64 (50%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 A +++ +P + Q+L F FGR+ KV+V + F FV YD A+ A+ Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRI--RKVWVARRPPG---FAFVEYDDVRDAEDAVR 57 Query: 317 MMNG 306 ++G Sbjct: 58 ALDG 61
>ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (Unwinding protein 1) (UP1) (Fragment) Length = 195 Score = 32.3 bits (72), Expect = 1.5 Identities = 19/58 (32%), Positives = 29/58 (50%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 LFI + E D+ L F+ +G + V D T S+ FGFV+Y + AA++ Sbjct: 15 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 72
>ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) Length = 371 Score = 32.3 bits (72), Expect = 1.5 Identities = 19/58 (32%), Positives = 29/58 (50%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 LFI + E D+ L F+ +G + V D T S+ FGFV+Y + AA++ Sbjct: 15 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 72
>SFRS9_MOUSE (Q9D0B0) Splicing factor, arginine/serine-rich 9| Length = 222 Score = 32.3 bits (72), Expect = 1.5 Identities = 17/69 (24%), Positives = 33/69 (47%) Frame = -3 Query: 509 GPPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQ 330 G +++ ++P + ++DL F +GR+ ++ K F FV ++ P A+ Sbjct: 11 GEGDGRIYVGNLPSDVREKDLEDLFYKYGRIREIEL---KNRHGLVPFAFVRFEDPRDAE 67 Query: 329 AAISMMNGF 303 AI NG+ Sbjct: 68 DAIYGRNGY 76
>ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (CArG-binding factor-A) (CBF-A) Length = 285 Score = 32.3 bits (72), Expect = 1.5 Identities = 14/57 (24%), Positives = 28/57 (49%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 +F+ + + +DL F FG V+ + +D TG S+ FGF+ + + + + Sbjct: 77 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVL 133
>ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP) Length = 319 Score = 32.3 bits (72), Expect = 1.5 Identities = 19/58 (32%), Positives = 29/58 (50%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 LFI + E D+ L F+ +G + V D T S+ FGFV+Y + AA++ Sbjct: 15 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 72
>ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) (HDP-1) (Topoisomerase-inhibitor suppressed) Length = 319 Score = 32.3 bits (72), Expect = 1.5 Identities = 19/58 (32%), Positives = 29/58 (50%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 LFI + E D+ L F+ +G + V D T S+ FGFV+Y + AA++ Sbjct: 15 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 72
>ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 319 Score = 32.3 bits (72), Expect = 1.5 Identities = 19/58 (32%), Positives = 29/58 (50%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 LFI + E D+ L F+ +G + V D T S+ FGFV+Y + AA++ Sbjct: 15 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKVDAAMN 72
>SFRS9_RAT (Q5PPI1) Splicing factor, arginine/serine-rich 9| Length = 221 Score = 32.0 bits (71), Expect = 2.0 Identities = 17/69 (24%), Positives = 33/69 (47%) Frame = -3 Query: 509 GPPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQ 330 G +++ ++P + ++DL F +GR+ ++ K F FV ++ P A+ Sbjct: 10 GEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIEL---KNRHGLVPFAFVRFEDPRDAE 66 Query: 329 AAISMMNGF 303 AI NG+ Sbjct: 67 DAIYGRNGY 75
>SFRS9_HUMAN (Q13242) Splicing factor, arginine/serine-rich 9 (Pre-mRNA-splicing| factor SRp30C) Length = 221 Score = 32.0 bits (71), Expect = 2.0 Identities = 17/69 (24%), Positives = 33/69 (47%) Frame = -3 Query: 509 GPPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQ 330 G +++ ++P + ++DL F +GR+ ++ K F FV ++ P A+ Sbjct: 10 GEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIEL---KNRHGLVPFAFVRFEDPRDAE 66 Query: 329 AAISMMNGF 303 AI NG+ Sbjct: 67 DAIYGRNGY 75
>HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 32.0 bits (71), Expect = 2.0 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSY 351 +FI + + +DL F FG V+ + +D TG S+ FGFV + Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLF 145
>HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 32.0 bits (71), Expect = 2.0 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSY 351 +FI + + +DL F FG V+ + +D TG S+ FGFV + Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLF 145
>EWS_HUMAN (Q01844) RNA-binding protein EWS (EWS oncogene) (Ewing sarcoma| breakpoint region 1 protein) Length = 656 Score = 32.0 bits (71), Expect = 2.0 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 8/57 (14%) Frame = -3 Query: 452 DLAHAFQSFGRVLSAK--------VFVDKATGASKCFGFVSYDSPAPAQAAISMMNG 306 DLA F+ G V K +++DK TG K VSY+ P A+AA+ +G Sbjct: 376 DLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDG 432
>ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 378 Score = 32.0 bits (71), Expect = 2.0 Identities = 19/57 (33%), Positives = 26/57 (45%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 LFI + E D L F+ +G + V D T S+ FGFV+Y AA+ Sbjct: 37 LFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAM 93
>RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-rich 3 (CeSF2)| (CeSF2/ASF) Length = 258 Score = 32.0 bits (71), Expect = 2.0 Identities = 14/69 (20%), Positives = 34/69 (49%) Frame = -3 Query: 509 GPPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQ 330 G +++ ++P + ++++ F +GR+ +VD +G F FV ++ A+ Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIK----YVDIKSGRGPAFAFVEFEDHRDAE 60 Query: 329 AAISMMNGF 303 A+ +G+ Sbjct: 61 DAVRARDGY 69
>ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 32.0 bits (71), Expect = 2.0 Identities = 19/57 (33%), Positives = 26/57 (45%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 LFI + E D L F+ +G + V D T S+ FGFV+Y AA+ Sbjct: 37 LFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAM 93
>ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 32.0 bits (71), Expect = 2.0 Identities = 19/57 (33%), Positives = 26/57 (45%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAI 321 LFI + E D L F+ +G + V D T S+ FGFV+Y AA+ Sbjct: 37 LFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAM 93
>EWS_MOUSE (Q61545) RNA-binding protein EWS| Length = 655 Score = 32.0 bits (71), Expect = 2.0 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 8/57 (14%) Frame = -3 Query: 452 DLAHAFQSFGRVLSAK--------VFVDKATGASKCFGFVSYDSPAPAQAAISMMNG 306 DLA F+ G V K +++DK TG K VSY+ P A+AA+ +G Sbjct: 375 DLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDG 431
>PAQR3_MOUSE (Q6TCG8) Progestin and adipoQ receptor family member 3 (Progestin| and adipoQ receptor family member III) Length = 311 Score = 31.6 bits (70), Expect = 2.6 Identities = 17/50 (34%), Positives = 29/50 (58%) Frame = -2 Query: 696 QFNAVGQPLSSWAWYAVSWVISWWWHQ*SSLHEFS*FR*SS*CKCYISHI 547 Q N +G S W+ ++ V+ +WWHQ S+++ +R S C Y+SH+ Sbjct: 266 QLNYLGS--SHQIWHVLAVVMLYWWHQ-STVYVMQ-YRHSKPCPDYVSHL 311
>SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nuclear| ribonucleoprotein 40) (HNRNP 40) Length = 344 Score = 31.6 bits (70), Expect = 2.6 Identities = 13/49 (26%), Positives = 26/49 (53%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDS 345 +F+ + E D+++ F FG ++ ++ DK K F F+++DS Sbjct: 138 IFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDS 186
>ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 homolog (hnRNP| A1) (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 365 Score = 31.6 bits (70), Expect = 2.6 Identities = 19/58 (32%), Positives = 29/58 (50%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 LFI + E D+ L F+ +G + V D + S+ FGFV+Y S AA++ Sbjct: 16 LFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMT 73
>RSP1_CAEEL (Q23121) Probable splicing factor, arginine/serine-rich 1| (RNA-binding protein srp-5) (CeSRp75) Length = 312 Score = 31.6 bits (70), Expect = 2.6 Identities = 15/64 (23%), Positives = 30/64 (46%) Frame = -3 Query: 497 ANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 A ++I + ++D+ H F+ +G++ + FGFV +D A+ A+ Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVH 54 Query: 317 MMNG 306 +NG Sbjct: 55 DLNG 58
>PAQR3_HUMAN (Q6TCH7) Progestin and adipoQ receptor family member 3 (Progestin| and adipoQ receptor family member III) Length = 311 Score = 31.2 bits (69), Expect = 3.4 Identities = 17/50 (34%), Positives = 29/50 (58%) Frame = -2 Query: 696 QFNAVGQPLSSWAWYAVSWVISWWWHQ*SSLHEFS*FR*SS*CKCYISHI 547 Q N +G S W+ ++ V+ +WWHQ S+++ +R S C Y+SH+ Sbjct: 266 QLNYLGS--SHQIWHILAVVMLYWWHQ-STVYVMQ-YRHSKPCPDYVSHL 311
>HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 353 Score = 31.2 bits (69), Expect = 3.4 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSY 351 +FI + + +DL F FG V+ + +D TG S+ FGFV + Sbjct: 97 MFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLF 143
>PES4_YEAST (P39684) Protein PES4 (DNA polymerase epsilon suppressor 4)| Length = 611 Score = 31.2 bits (69), Expect = 3.4 Identities = 19/90 (21%), Positives = 38/90 (42%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISM 315 ++FI ++P D+ + F G + S +++ AT + FV+Y + + ++ AI Sbjct: 304 SIFIKNLPTITTRDDILNFFSEVGPIKS--IYLSNATKVKYLWAFVTYKNSSDSEKAIKR 361 Query: 314 MNGFXXXXXXXXXXXKRDNSKHNKLY*QQQ 225 N F +D + K Q+ Sbjct: 362 YNNFYFRGKKLLVTRAQDKEERAKFIESQK 391 Score = 31.2 bits (69), Expect = 3.4 Identities = 16/61 (26%), Positives = 32/61 (52%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 LFI + + ++ L F+ + +SAKV +D T S G+++++ A+ A+ + Sbjct: 93 LFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAEKAMEEL 152 Query: 311 N 309 N Sbjct: 153 N 153
>MK67I_MOUSE (Q91VE6) MKI67 FHA domain-interacting nucleolar phosphoprotein| (Nucleolar protein interacting with the FHA domain of pKI-67) (mNIFK) Length = 317 Score = 31.2 bits (69), Expect = 3.4 Identities = 14/63 (22%), Positives = 30/63 (47%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 +++ H+P + + + FG + ++ K TG SK + FV ++S A+ M Sbjct: 49 VYLGHLPSTLSESHIYNYCAQFGDISRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETM 108 Query: 311 NGF 303 + + Sbjct: 109 DNY 111
>UL92_EBV (P03223) Protein BDLF4| Length = 225 Score = 31.2 bits (69), Expect = 3.4 Identities = 12/35 (34%), Positives = 17/35 (48%) Frame = +1 Query: 100 TKIQQTATDDDTWWRPEETMGRTINCATHMYRFFL 204 T+I+Q D W PE+ G H+Y +FL Sbjct: 91 TEIRQDTQDQRDKWEPEQVQGLVKTVVNHLYHYFL 125
>RBM14_PONPY (Q5RC41) RNA-binding protein 14 (RNA-binding motif protein 14)| Length = 669 Score = 30.8 bits (68), Expect = 4.4 Identities = 18/62 (29%), Positives = 30/62 (48%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 +F+ ++ Q+L F+ GRV+ V D + FV + A A+AAI+ + Sbjct: 81 IFVGNVSAACTSQELRSLFERRGRVIECDVVKD--------YAFVHMEKEADAKAAIAQL 132 Query: 311 NG 306 NG Sbjct: 133 NG 134
>RBM14_MOUSE (Q8C2Q3) RNA-binding protein 14 (RNA-binding motif protein 14)| Length = 669 Score = 30.8 bits (68), Expect = 4.4 Identities = 18/62 (29%), Positives = 30/62 (48%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 +F+ ++ Q+L F+ GRV+ V D + FV + A A+AAI+ + Sbjct: 81 IFVGNVSAACTSQELRSLFERRGRVIECDVVKD--------YAFVHMEKEADAKAAIAQL 132 Query: 311 NG 306 NG Sbjct: 133 NG 134
>RBM14_HUMAN (Q96PK6) RNA-binding protein 14 (RNA-binding motif protein 14)| (RRM-containing coactivator activator/modulator) (Synaptotagmin-interacting protein) (SYT-interacting protein) Length = 669 Score = 30.8 bits (68), Expect = 4.4 Identities = 18/62 (29%), Positives = 30/62 (48%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 +F+ ++ Q+L F+ GRV+ V D + FV + A A+AAI+ + Sbjct: 81 IFVGNVSAACTSQELRSLFERRGRVIECDVVKD--------YAFVHMEKEADAKAAIAQL 132 Query: 311 NG 306 NG Sbjct: 133 NG 134
>RBM14_BOVIN (Q5EA36) RNA-binding protein 14 (RNA-binding motif protein 14)| Length = 669 Score = 30.8 bits (68), Expect = 4.4 Identities = 18/62 (29%), Positives = 30/62 (48%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 +F+ ++ Q+L F+ GRV+ V D + FV + A A+AAI+ + Sbjct: 81 IFVGNVSAACTSQELRSLFERRGRVIECDVVKD--------YAFVHMEKEADAKAAIAQL 132 Query: 311 NG 306 NG Sbjct: 133 NG 134
>CAZ_DROME (Q27294) RNA-binding protein cabeza (Sarcoma-associated RNA-binding| fly homolog) (P19) Length = 399 Score = 30.8 bits (68), Expect = 4.4 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 8/70 (11%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFG------RVLSAKVFV--DKATGASKCFGFVSYDSPAP 336 +F+ + +QD+ F + G R + K+++ +K TGASK V+YD Sbjct: 122 IFVSGMDPSTTEQDIETHFGAIGIIKKDKRTMKPKIWLYKNKETGASKGEATVTYDDTNA 181 Query: 335 AQAAISMMNG 306 AQ+AI +G Sbjct: 182 AQSAIEWFDG 191
>YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c in chromosome| II Length = 473 Score = 30.4 bits (67), Expect = 5.8 Identities = 16/72 (22%), Positives = 35/72 (48%) Frame = -3 Query: 518 QLEGPPGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPA 339 Q + +F+ + + +++L + FQ+FG ++ K+ K GFV + + Sbjct: 296 QFADTANSTVFVGGLSKFVSEEELKYLFQNFGEIVYVKI------PPGKGCGFVQFVNRQ 349 Query: 338 PAQAAISMMNGF 303 A+ AI+ + G+ Sbjct: 350 SAEIAINQLQGY 361 Score = 30.0 bits (66), Expect = 7.6 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Frame = -3 Query: 494 NLFIYHIPQEFGDQDLAHAFQS-FGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAIS 318 ++F+ + + D+ F S + SAK+ D T S+ +GFV + ++A++ Sbjct: 187 SIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALA 246 Query: 317 MMNG 306 M G Sbjct: 247 EMQG 250
>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (RA301) Length = 288 Score = 30.4 bits (67), Expect = 5.8 Identities = 15/66 (22%), Positives = 30/66 (45%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 P L ++ + ++DL F +G + + D+ + S+ F FV +++ A+ A Sbjct: 116 PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEA 175 Query: 323 ISMMNG 306 NG Sbjct: 176 KERANG 181
>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (Silica-induced gene 41 protein) (SIG-41) Length = 288 Score = 30.4 bits (67), Expect = 5.8 Identities = 15/66 (22%), Positives = 30/66 (45%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 P L ++ + ++DL F +G + + D+ + S+ F FV +++ A+ A Sbjct: 116 PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEA 175 Query: 323 ISMMNG 306 NG Sbjct: 176 KERANG 181
>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) Length = 288 Score = 30.4 bits (67), Expect = 5.8 Identities = 15/66 (22%), Positives = 30/66 (45%) Frame = -3 Query: 503 PGANLFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAA 324 P L ++ + ++DL F +G + + D+ + S+ F FV +++ A+ A Sbjct: 116 PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEA 175 Query: 323 ISMMNG 306 NG Sbjct: 176 KERANG 181
>PPIE_DROME (Q9V3G3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 300 Score = 30.4 bits (67), Expect = 5.8 Identities = 16/61 (26%), Positives = 30/61 (49%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAKVFVDKATGASKCFGFVSYDSPAPAQAAISMM 312 +++ + E ++ L +AF FG + ++ D + + F F+ Y+ A AAI M Sbjct: 8 IYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAAAAIDNM 67 Query: 311 N 309 N Sbjct: 68 N 68
>RBP56_HUMAN (Q92804) TATA-binding protein-associated factor 2N (RNA-binding| protein 56) (TAFII68) (TAF(II)68) Length = 592 Score = 29.6 bits (65), Expect = 9.9 Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 8/70 (11%) Frame = -3 Query: 491 LFIYHIPQEFGDQDLAHAFQSFGRVLSAK--------VFVDKATGASKCFGFVSYDSPAP 336 +F+ + + + F+ G + + K ++ DK TG K VS+D P Sbjct: 236 IFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKGEATVSFDDPPS 295 Query: 335 AQAAISMMNG 306 A+AAI +G Sbjct: 296 AKAAIDWFDG 305 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 105,467,876 Number of Sequences: 219361 Number of extensions: 2167368 Number of successful extensions: 5813 Number of sequences better than 10.0: 259 Number of HSP's better than 10.0 without gapping: 5303 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5761 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7479594804 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
