ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags7j20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK073796.1| Oryza sativa (japonica cultivar-group) cDNA clon... 434 e-118
2dbj|AK073553.1| Oryza sativa (japonica cultivar-group) cDNA clon... 420 e-114
3gb|AY104506.1| Zea mays PCO080326 mRNA sequence 256 9e-65
4ref|XM_475151.1| Oryza sativa (japonica cultivar-group), predic... 188 2e-44
5ref|NM_190082.1| Oryza sativa (japonica cultivar-group), predic... 176 7e-41
6dbj|AK099501.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 7e-41
7gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome... 165 3e-37
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 165 3e-37
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
10dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
11dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
12gb|AY107712.1| Zea mays PCO079656 mRNA sequence 78 5e-11
13ref|NM_116545.2| Arabidopsis thaliana RNA binding / nucleic acid... 64 7e-07
14gb|AY084669.1| Arabidopsis thaliana clone 114653 mRNA, complete ... 64 7e-07
15gb|AC122543.1| Genomic sequence for Brassica oleracea, clone B21... 58 4e-05
16gb|AY021985.1| Oryza sativa microsatellite MRG4310 containing (T... 56 2e-04
17ref|NM_178963.1| Arabidopsis thaliana RNA binding / nucleic acid... 50 0.010
18gb|AF069442.1| Arabidopsis thaliana BAC T4I9, chromosome IV, nea... 50 0.010
19gb|AC005275.1| Arabidopsis thaliana BAC F4C21 from chromosome IV... 50 0.010
20emb|AL161496.2|ATCHRIV8 Arabidopsis thaliana DNA chromosome 4, c... 50 0.010
21gb|AY065261.1| Arabidopsis thaliana putative ribonucleoprotein (... 50 0.010
22gb|AC110540.7| Mus musculus chromosome 3, clone RP23-105B8, comp... 46 0.16
23gb|DP000012.1| Macropus eugenii target 1 genomic scaffold 44 0.64
24gb|AC023680.3| Drosophila melanogaster 3L BAC RPCI98-9C2 (Roswel... 44 0.64
25emb|BX005421.6| Zebrafish DNA sequence from clone DKEY-36H5, com... 44 0.64
26gb|AC145184.3| Macropus eugenii clone ME_KBa-71M6, complete sequ... 44 0.64
27gb|AE003479.3| Drosophila melanogaster chromosome 3L, section 13... 44 0.64
28gb|AC140245.3| Mus musculus BAC clone RP23-293J3 from chromosome... 42 2.5
29ref|XM_762212.1| Giardia lamblia ATCC 50803 serine protease (GLP... 42 2.5
30emb|Z97630.11|HS466N1 Human DNA sequence from clone RP3-466N1 on... 42 2.5
31emb|CR735104.7| Zebrafish DNA sequence from clone DKEYP-72G9 in ... 42 2.5
32emb|BX088694.4| Zebrafish DNA sequence from clone CH211-193C2 in... 42 2.5
33dbj|AB248638.1| Uncultured bacterium gene for 16S rRNA, partial ... 42 2.5
34gb|AC151840.5| Mus musculus BAC clone RP23-150L19 from chromosom... 42 2.5
35gb|AC026951.5|AC026951 Homo sapiens chromosome 15, clone RP11-45... 42 2.5
36emb|CT573421.5| M.truncatula DNA sequence from clone MTH2-27B10 ... 42 2.5
37emb|CT030238.7| Mouse DNA sequence from clone RP23-428E20 on chr... 42 2.5
38ref|XM_636302.1| Dictyostelium discoideum G-protein subunit alph... 40 10.0
39ref|NG_001335.1| Homo sapiens genomic large histone family clust... 40 10.0
40gb|AC165239.3| Mus musculus chromosome 19, clone RP24-73C2, comp... 40 10.0
41gb|AC073901.5| Homo sapiens BAC clone RP11-222O23 from 7, comple... 40 10.0
42gb|AC149806.16| Medicago truncatula clone mth2-150h12, complete ... 40 10.0
43gb|AC139526.22| Medicago truncatula clone mth2-9b23, complete se... 40 10.0
44ref|XM_501542.1| Yarrowia lipolytica CLIB122, YALI0C07040g predi... 40 10.0
45emb|AL596168.1| Listeria innocua Clip11262 complete genome, segm... 40 10.0
46gb|AC009646.12| Homo sapiens chromosome 8, clone RP11-162D9, com... 40 10.0
47dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl... 40 10.0
48gb|AC016113.9| Homo sapiens, clone RP11-26P22, complete sequence 40 10.0
49gb|U91328.1|HSU91328 Human hereditary haemochromatosis region, h... 40 10.0
50gb|AC163694.2| Mus musculus BAC clone RP24-80O2 from chromosome ... 40 10.0
51gb|AC152161.4| Mus musculus chromosome 19, clone RP23-162O21, co... 40 10.0
52gb|AC005406.2| Homo sapiens clone b128f11, complete sequence 40 10.0
53gb|AC010598.6| Homo sapiens chromosome 5 clone CTC-560O9, comple... 40 10.0
54gb|AC154376.3| Mus musculus BAC clone RP23-71H16 from chromosome... 40 10.0
55gb|AC011996.8| Homo sapiens BAC clone RP11-250H22 from 2, comple... 40 10.0
56emb|AL731729.10| Mouse DNA sequence from clone RP23-92L12 on chr... 40 10.0
57dbj|AK129392.1| Mus musculus mRNA for mKIAA1558 protein 40 10.0
58gb|AC124627.22| Mus musculus chromosome 19, clone RP23-435K14, c... 40 10.0
59dbj|AP002850.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 10.0
60gb|AC117797.9| Mus musculus chromosome 19, clone RP24-555M16, co... 40 10.0
61emb|CT030641.11| Mouse DNA sequence from clone RP23-32M15 on chr... 40 10.0
62emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 40 10.0
63dbj|AP004916.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 10.0
64dbj|AP002905.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 10.0 
>dbj|AK073796.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067B10, full
            insert sequence
          Length = 1739

 Score =  434 bits (219), Expect = e-118
 Identities = 402/463 (86%)
 Strand = Plus / Minus

                                                                        
Query: 230  gctgtcagtaaagtttattgtgcttgctgttgtctctcttgagttgtactttcagctttt 289
            ||||||| |||  |||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1497 gctgtcaataagttttactgtgcttgctgttgtctctcttgagttgtactttcagttttt 1438

                                                                        
Query: 290  taccacctaattggaacccattcatcatacttatggctgcctgcgcaggagcaggtgaat 349
            |||||||||||||| | || ||||||||||| ||||||| ||| |||| |||||| ||||
Sbjct: 1437 taccacctaattggtatccgttcatcatactaatggctgtctgtgcagaagcaggagaat 1378

                                                                        
Query: 350  cgtagcttacaaaaccgaagcatttactagcaccagttgctttgtctacaaatactttgg 409
            | ||||||| |||||||||||||||||||  ||||||||||||||||||||| ||||| |
Sbjct: 1377 catagcttataaaaccgaagcatttactaagaccagttgctttgtctacaaaaactttag 1318

                                                                        
Query: 410  cactcaatactctaccaaaactctgaaatgcatgtgctagatcttggtcgccgaattctt 469
            |||||| |||||||||||||| |||||| |||   || |||||||||||||| |||||||
Sbjct: 1317 cactcagtactctaccaaaaccctgaaaggcaccggcaagatcttggtcgccaaattctt 1258

                                                                        
Query: 470  gcgggatgtgatagataaacaagttggctccaggaggaccctctagctgaggaccagtgt 529
            | |||||||| |||||||| || |||||||||||||||||||||| ||||||||| | ||
Sbjct: 1257 gagggatgtggtagataaataaattggctccaggaggaccctctatctgaggaccggggt 1198

                                                                        
Query: 530  tgctgccggtacttgaagatgtgggagatgtagcatttgcattaggaactttaacggaat 589
            ||||||  ||||||||||| ||||||||  ||||||| ||||| |||||||| |  ||||
Sbjct: 1197 tgctgctagtacttgaagaagtgggagaactagcattcgcatttggaactttcattgaat 1138

                                                                        
Query: 590  tatgagaattcatgtaaggacgactattgatgccaccaccaggatatgacccaggatact 649
            | ||||||||||   ||||||||||||||||  ||  |||||||||||| || |||||||
Sbjct: 1137 tgtgagaattcacaaaaggacgactattgatagcattaccaggatatgatcccggatact 1078

                                                       
Query: 650  gcataccaggcccagctggataagggctgcccaactgcattga 692
            |||||| |||| |||  | |||||| ||||| |||||||||||
Sbjct: 1077 gcatactaggcacaggcgaataaggactgcctaactgcattga 1035



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                        
Query: 6    tgatgtacaatgggtctgatggtacagaggctacaactatgctg 49
            ||||||||||||| ||||||||||||||  ||||||||||||||
Sbjct: 1707 tgatgtacaatggatctgatggtacagattctacaactatgctg 1664



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 43/48 (89%), Gaps = 2/48 (4%)
 Strand = Plus / Minus

                                                            
Query: 165  aacgatcaatt-gtgcgacacatatgtaccggtttttcctgatcgtgt 211
            ||||||||||| ||| ||||||||||||||   |||||||||||||||
Sbjct: 1560 aacgatcaatttgtgtgacacatatgtacc-aattttcctgatcgtgt 1514
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>dbj|AK073553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045O20, full
            insert sequence
          Length = 2722

 Score =  420 bits (212), Expect = e-114
 Identities = 402/464 (86%), Gaps = 1/464 (0%)
 Strand = Plus / Minus

                                                                        
Query: 230  gctgtcagtaaagtttattgtgcttgctgttgtctctcttgagttgtactttcagctttt 289
            ||||||| |||  |||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2518 gctgtcaataagttttactgtgcttgctgttgtctctcttgagttgtactttcagttttt 2459

                                                                        
Query: 290  taccacctaattggaacccattcatcatacttatggctgcctgcgcaggagcaggtgaat 349
            |||||||||||||| | || ||||||||||| ||||||| ||| |||| |||||| ||||
Sbjct: 2458 taccacctaattggtatccgttcatcatactaatggctgtctgtgcagaagcaggagaat 2399

                                                                        
Query: 350  cgtagcttacaaaaccgaagcatttactagcaccagttgctttgtctacaaatactttgg 409
            | ||||||| |||||||||||||||||||  ||||||||||||||||||||| ||||| |
Sbjct: 2398 catagcttataaaaccgaagcatttactaagaccagttgctttgtctacaaaaactttag 2339

                                                                        
Query: 410  cactcaatactctaccaaaactctgaaatgcatgtgctagatcttggtcgccgaattctt 469
            |||||| |||||||||||||| |||||| |||   || |||||||||||||| |||||||
Sbjct: 2338 cactcagtactctaccaaaaccctgaaaggcaccggcaagatcttggtcgccaaattctt 2279

                                                                        
Query: 470  gcgggatgtgatagataaacaagttggctccaggagga-ccctctagctgaggaccagtg 528
            | |||||||| |||||||| || ||||||||||||||| ||||||| ||||||||| | |
Sbjct: 2278 gagggatgtggtagataaataaattggctccaggaggacccctctatctgaggaccgggg 2219

                                                                        
Query: 529  ttgctgccggtacttgaagatgtgggagatgtagcatttgcattaggaactttaacggaa 588
            |||||||  ||||||||||| ||||||||  ||||||| ||||| |||||||| |  |||
Sbjct: 2218 ttgctgctagtacttgaagaagtgggagaactagcattcgcatttggaactttcattgaa 2159

                                                                        
Query: 589  ttatgagaattcatgtaaggacgactattgatgccaccaccaggatatgacccaggatac 648
            || ||||||||||   ||||||||||||||||  ||  |||||||||||| || ||||||
Sbjct: 2158 ttgtgagaattcacaaaaggacgactattgatagcattaccaggatatgatcccggatac 2099

                                                        
Query: 649  tgcataccaggcccagctggataagggctgcccaactgcattga 692
            ||||||| |||| |||  | |||||| ||||| |||||||||||
Sbjct: 2098 tgcatactaggcacaggcgaataaggactgcctaactgcattga 2055



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 12   acaatgggtctgatggtacagaggctacaactatgctg 49
            ||||||| ||||||||||||||  ||||||||||||||
Sbjct: 2722 acaatggatctgatggtacagattctacaactatgctg 2685



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 43/48 (89%), Gaps = 2/48 (4%)
 Strand = Plus / Minus

                                                            
Query: 165  aacgatcaatt-gtgcgacacatatgtaccggtttttcctgatcgtgt 211
            ||||||||||| ||| ||||||||||||||   |||||||||||||||
Sbjct: 2581 aacgatcaatttgtgtgacacatatgtacc-aattttcctgatcgtgt 2535
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>gb|AY104506.1| Zea mays PCO080326 mRNA sequence
          Length = 1081

 Score =  256 bits (129), Expect = 9e-65
 Identities = 270/317 (85%)
 Strand = Plus / Minus

                                                                       
Query: 232 tgtcagtaaagtttattgtgcttgctgttgtctctcttgagttgtactttcagcttttta 291
           |||||| || ||||| ||||||||||||||||||||||||| |||||||||| |||||| 
Sbjct: 772 tgtcagaaaggtttactgtgcttgctgttgtctctcttgagctgtactttcaactttttg 713

                                                                       
Query: 292 ccacctaattggaacccattcatcatacttatggctgcctgcgcaggagcaggtgaatcg 351
           || ||||||||| | |||||||||| ||| ||||||||||| ||||  || || || |||
Sbjct: 712 ccgcctaattggtatccattcatcacactgatggctgcctgtgcagaggctggagagtcg 653

                                                                       
Query: 352 tagcttacaaaaccgaagcatttactagcaccagttgctttgtctacaaatactttggca 411
           |||||||| ||||| |||||||||||| |||||||||| |||||||| || |||||||| 
Sbjct: 652 tagcttacgaaaccaaagcatttactaacaccagttgccttgtctacgaaaactttggcg 593

                                                                       
Query: 412 ctcaatactctaccaaaactctgaaatgcatgtgctagatcttggtcgccgaattcttgc 471
           |||| ||| ||||| ||||| || ||||||   || ||||| ||||| ||||||||||||
Sbjct: 592 ctcagtaccctaccgaaactatggaatgcactggcaagatcatggtcaccgaattcttgc 533

                                                                       
Query: 472 gggatgtgatagataaacaagttggctccaggaggaccctctagctgaggaccagtgttg 531
           |||||||| || || ||||| |||||||||||||||||||||| ||| || ||||  |||
Sbjct: 532 gggatgtggtatatgaacaaattggctccaggaggaccctctatctgggggccaggattg 473

                            
Query: 532 ctgccggtacttgaaga 548
           |||| || ||| |||||
Sbjct: 472 ctgctgggactcgaaga 456
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>ref|XM_475151.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1146

 Score =  188 bits (95), Expect = 2e-44
 Identities = 231/276 (83%), Gaps = 4/276 (1%)
 Strand = Plus / Minus

                                                                        
Query: 421  ctaccaaaactctgaaatgcatgtgctagatcttggtcgccgaattcttgcgggatgtga 480
            |||||||||| |||||| |||   || |||||||||||||| |||||||| |||||||| 
Sbjct: 1146 ctaccaaaaccctgaaaggcaccggcaagatcttggtcgccaaattcttgagggatgtgg 1087

                                                                        
Query: 481  tagataaacaagttggctccaggaggac----cctctagctgaggaccagtgttgctgcc 536
            |||||||| || ||||||||||||||||    |||||| ||||||||| | |||||||| 
Sbjct: 1086 tagataaataaattggctccaggaggacaaaccctctatctgaggaccggggttgctgct 1027

                                                                        
Query: 537  ggtacttgaagatgtgggagatgtagcatttgcattaggaactttaacggaattatgaga 596
             ||||||||||| ||||||||  ||||||| ||||| |||||||| |  ||||| |||||
Sbjct: 1026 agtacttgaagaagtgggagaactagcattcgcatttggaactttcattgaattgtgaga 967

                                                                        
Query: 597  attcatgtaaggacgactattgatgccaccaccaggatatgacccaggatactgcatacc 656
            |||||   ||||||||||||||||  ||  |||||||||||| || ||||||||||||| 
Sbjct: 966  attcacaaaaggacgactattgatagcattaccaggatatgatcccggatactgcatact 907

                                                
Query: 657  aggcccagctggataagggctgcccaactgcattga 692
            |||| |||  | |||||| ||||| |||||||||||
Sbjct: 906  aggcacaggcgaataaggactgcctaactgcattga 871
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>ref|NM_190082.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1383

 Score =  176 bits (89), Expect = 7e-41
 Identities = 227/273 (83%)
 Strand = Plus / Minus

                                                                        
Query: 242  gtttattgtgcttgctgttgtctctcttgagttgtactttcagctttttaccacctaatt 301
            ||||| ||||||||  |||||||||||||||||||||||| || |||||||  |||||||
Sbjct: 1375 gtttactgtgcttggagttgtctctcttgagttgtactttgagttttttactgcctaatt 1316

                                                                        
Query: 302  ggaacccattcatcatacttatggctgcctgcgcaggagcaggtgaatcgtagcttacaa 361
            |||| || ||||||| ||  ||||||||||| || | |||||| ||||||||||||||||
Sbjct: 1315 ggaaaccgttcatcacaccaatggctgcctgtgcggaagcaggagaatcgtagcttacaa 1256

                                                                        
Query: 362  aaccgaagcatttactagcaccagttgctttgtctacaaatactttggcactcaatactc 421
            |||| |||||||| || | ||| ||||||||||||||||| || || ||||| | |||||
Sbjct: 1255 aaccaaagcatttgctggaacccgttgctttgtctacaaaaaccttagcacttagtactc 1196

                                                                        
Query: 422  taccaaaactctgaaatgcatgtgctagatcttggtcgccgaattcttgcgggatgtgat 481
            |||| || ||||| |||||||  |  || |||||||| ||  | ||||| ||||| ||||
Sbjct: 1195 taccgaacctctggaatgcattggaaaggtcttggtccccataatcttgtgggatatgat 1136

                                             
Query: 482  agataaacaagttggctccaggaggaccctcta 514
            ||||||| |  || ||||| |||||||| ||||
Sbjct: 1135 agataaatagattagctcctggaggaccttcta 1103



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 103/123 (83%)
 Strand = Plus / Minus

                                                                        
Query: 605  aaggacgactattgatgccaccaccaggatatgacccaggatactgcataccaggcccag 664
            |||||||| |||| |||  ||||||||| || || |||| |||||||| ||||||  |||
Sbjct: 1012 aaggacgattattcatgagaccaccagggtaggatccagcatactgcacaccaggtacag 953

                                                                        
Query: 665  ctggataagggctgcccaactgcattgaattgaatgacctagcaactgaattangggata 724
             ||||||||||||||  ||||||||||  |||||||| |||| |||||||||| |||| |
Sbjct: 952  gtggataagggctgcttaactgcattgcgttgaatgatctaggaactgaattaggggaca 893

               
Query: 725  gtt 727
            |||
Sbjct: 892  gtt 890
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>dbj|AK099501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028I07, full
            insert sequence
          Length = 1837

 Score =  176 bits (89), Expect = 7e-41
 Identities = 227/273 (83%)
 Strand = Plus / Minus

                                                                        
Query: 242  gtttattgtgcttgctgttgtctctcttgagttgtactttcagctttttaccacctaatt 301
            ||||| ||||||||  |||||||||||||||||||||||| || |||||||  |||||||
Sbjct: 1551 gtttactgtgcttggagttgtctctcttgagttgtactttgagttttttactgcctaatt 1492

                                                                        
Query: 302  ggaacccattcatcatacttatggctgcctgcgcaggagcaggtgaatcgtagcttacaa 361
            |||| || ||||||| ||  ||||||||||| || | |||||| ||||||||||||||||
Sbjct: 1491 ggaaaccgttcatcacaccaatggctgcctgtgcggaagcaggagaatcgtagcttacaa 1432

                                                                        
Query: 362  aaccgaagcatttactagcaccagttgctttgtctacaaatactttggcactcaatactc 421
            |||| |||||||| || | ||| ||||||||||||||||| || || ||||| | |||||
Sbjct: 1431 aaccaaagcatttgctggaacccgttgctttgtctacaaaaaccttagcacttagtactc 1372

                                                                        
Query: 422  taccaaaactctgaaatgcatgtgctagatcttggtcgccgaattcttgcgggatgtgat 481
            |||| || ||||| |||||||  |  || |||||||| ||  | ||||| ||||| ||||
Sbjct: 1371 taccgaacctctggaatgcattggaaaggtcttggtccccataatcttgtgggatatgat 1312

                                             
Query: 482  agataaacaagttggctccaggaggaccctcta 514
            ||||||| |  || ||||| |||||||| ||||
Sbjct: 1311 agataaatagattagctcctggaggaccttcta 1279



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 103/123 (83%)
 Strand = Plus / Minus

                                                                        
Query: 605  aaggacgactattgatgccaccaccaggatatgacccaggatactgcataccaggcccag 664
            |||||||| |||| |||  ||||||||| || || |||| |||||||| ||||||  |||
Sbjct: 1188 aaggacgattattcatgagaccaccagggtaggatccagcatactgcacaccaggtacag 1129

                                                                        
Query: 665  ctggataagggctgcccaactgcattgaattgaatgacctagcaactgaattangggata 724
             ||||||||||||||  ||||||||||  |||||||| |||| |||||||||| |||| |
Sbjct: 1128 gtggataagggctgcttaactgcattgcgttgaatgatctaggaactgaattaggggaca 1069

               
Query: 725  gtt 727
            |||
Sbjct: 1068 gtt 1066
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>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09,
              complete sequence
          Length = 167318

 Score =  165 bits (83), Expect = 3e-37
 Identities = 131/147 (89%)
 Strand = Plus / Minus

                                                                          
Query: 363    accgaagcatttactagcaccagttgctttgtctacaaatactttggcactcaatactct 422
              ||||||||||||||||  ||||||||||||||||||||| ||||| ||||||| ||||||
Sbjct: 116255 accgaagcatttactaagaccagttgctttgtctacaaaaactttagcactcagtactct 116196

                                                                          
Query: 423    accaaaactctgaaatgcatgtgctagatcttggtcgccgaattcttgcgggatgtgata 482
              |||||||| |||||| |||   || |||||||||||||| |||||||| |||||||| ||
Sbjct: 116195 accaaaaccctgaaaggcaccggcaagatcttggtcgccaaattcttgagggatgtggta 116136

                                         
Query: 483    gataaacaagttggctccaggaggacc 509
              |||||| || |||||||||||||||||
Sbjct: 116135 gataaataaattggctccaggaggacc 116109



 Score =  151 bits (76), Expect = 4e-33
 Identities = 121/136 (88%)
 Strand = Plus / Minus

                                                                          
Query: 230    gctgtcagtaaagtttattgtgcttgctgttgtctctcttgagttgtactttcagctttt 289
              ||||||| |||  |||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 116463 gctgtcaataagttttactgtgcttgctgttgtctctcttgagttgtactttcagttttt 116404

                                                                          
Query: 290    taccacctaattggaacccattcatcatacttatggctgcctgcgcaggagcaggtgaat 349
              |||||||||||||| | || ||||||||||| ||||||| ||| |||| |||||| ||||
Sbjct: 116403 taccacctaattggtatccgttcatcatactaatggctgtctgtgcagaagcaggagaat 116344

                              
Query: 350    cgtagcttacaaaacc 365
              | ||||||| ||||||
Sbjct: 116343 catagcttataaaacc 116328



 Score =  131 bits (66), Expect = 4e-27
 Identities = 156/186 (83%)
 Strand = Plus / Minus

                                                                          
Query: 507    accctctagctgaggaccagtgttgctgccggtacttgaagatgtgggagatgtagcatt 566
              |||||||| ||||||||| | ||||||||  ||||||||||| ||||||||  |||||||
Sbjct: 116023 accctctatctgaggaccggggttgctgctagtacttgaagaagtgggagaactagcatt 115964

                                                                          
Query: 567    tgcattaggaactttaacggaattatgagaattcatgtaaggacgactattgatgccacc 626
               ||||| |||||||| |  ||||| ||||||||||   ||||||||||||||||  ||  
Sbjct: 115963 cgcatttggaactttcattgaattgtgagaattcacaaaaggacgactattgatagcatt 115904

                                                                          
Query: 627    accaggatatgacccaggatactgcataccaggcccagctggataagggctgcccaactg 686
              |||||||||||| || ||||||||||||| |||| |||  | |||||| ||||| |||||
Sbjct: 115903 accaggatatgatcccggatactgcatactaggcacaggcgaataaggactgcctaactg 115844

                    
Query: 687    cattga 692
              ||||||
Sbjct: 115843 cattga 115838



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                          
Query: 6      tgatgtacaatgggtctgatggtacagaggctacaactatgctg 49
              ||||||||||||| ||||||||||||||  ||||||||||||||
Sbjct: 116673 tgatgtacaatggatctgatggtacagattctacaactatgctg 116630



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 43/48 (89%), Gaps = 2/48 (4%)
 Strand = Plus / Minus

                                                              
Query: 165    aacgatcaatt-gtgcgacacatatgtaccggtttttcctgatcgtgt 211
              ||||||||||| ||| ||||||||||||||   |||||||||||||||
Sbjct: 116526 aacgatcaatttgtgtgacacatatgtacc-aattttcctgatcgtgt 116480
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  165 bits (83), Expect = 3e-37
 Identities = 131/147 (89%)
 Strand = Plus / Minus

                                                                            
Query: 363      accgaagcatttactagcaccagttgctttgtctacaaatactttggcactcaatactct 422
                ||||||||||||||||  ||||||||||||||||||||| ||||| ||||||| ||||||
Sbjct: 17856301 accgaagcatttactaagaccagttgctttgtctacaaaaactttagcactcagtactct 17856242

                                                                            
Query: 423      accaaaactctgaaatgcatgtgctagatcttggtcgccgaattcttgcgggatgtgata 482
                |||||||| |||||| |||   || |||||||||||||| |||||||| |||||||| ||
Sbjct: 17856241 accaaaaccctgaaaggcaccggcaagatcttggtcgccaaattcttgagggatgtggta 17856182

                                           
Query: 483      gataaacaagttggctccaggaggacc 509
                |||||| || |||||||||||||||||
Sbjct: 17856181 gataaataaattggctccaggaggacc 17856155



 Score =  151 bits (76), Expect = 4e-33
 Identities = 121/136 (88%)
 Strand = Plus / Minus

                                                                            
Query: 230      gctgtcagtaaagtttattgtgcttgctgttgtctctcttgagttgtactttcagctttt 289
                ||||||| |||  |||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 17856509 gctgtcaataagttttactgtgcttgctgttgtctctcttgagttgtactttcagttttt 17856450

                                                                            
Query: 290      taccacctaattggaacccattcatcatacttatggctgcctgcgcaggagcaggtgaat 349
                |||||||||||||| | || ||||||||||| ||||||| ||| |||| |||||| ||||
Sbjct: 17856449 taccacctaattggtatccgttcatcatactaatggctgtctgtgcagaagcaggagaat 17856390

                                
Query: 350      cgtagcttacaaaacc 365
                | ||||||| ||||||
Sbjct: 17856389 catagcttataaaacc 17856374



 Score =  131 bits (66), Expect = 4e-27
 Identities = 156/186 (83%)
 Strand = Plus / Minus

                                                                            
Query: 507      accctctagctgaggaccagtgttgctgccggtacttgaagatgtgggagatgtagcatt 566
                |||||||| ||||||||| | ||||||||  ||||||||||| ||||||||  |||||||
Sbjct: 17856069 accctctatctgaggaccggggttgctgctagtacttgaagaagtgggagaactagcatt 17856010

                                                                            
Query: 567      tgcattaggaactttaacggaattatgagaattcatgtaaggacgactattgatgccacc 626
                 ||||| |||||||| |  ||||| ||||||||||   ||||||||||||||||  ||  
Sbjct: 17856009 cgcatttggaactttcattgaattgtgagaattcacaaaaggacgactattgatagcatt 17855950

                                                                            
Query: 627      accaggatatgacccaggatactgcataccaggcccagctggataagggctgcccaactg 686
                |||||||||||| || ||||||||||||| |||| |||  | |||||| ||||| |||||
Sbjct: 17855949 accaggatatgatcccggatactgcatactaggcacaggcgaataaggactgcctaactg 17855890

                      
Query: 687      cattga 692
                ||||||
Sbjct: 17855889 cattga 17855884



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                            
Query: 6        tgatgtacaatgggtctgatggtacagaggctacaactatgctg 49
                ||||||||||||| ||||||||||||||  ||||||||||||||
Sbjct: 17856719 tgatgtacaatggatctgatggtacagattctacaactatgctg 17856676



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 43/48 (89%), Gaps = 2/48 (4%)
 Strand = Plus / Minus

                                                                
Query: 165      aacgatcaatt-gtgcgacacatatgtaccggtttttcctgatcgtgt 211
                ||||||||||| ||| ||||||||||||||   |||||||||||||||
Sbjct: 17856572 aacgatcaatttgtgtgacacatatgtacc-aattttcctgatcgtgt 17856526
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  119 bits (60), Expect = 1e-23
 Identities = 108/124 (87%)
 Strand = Plus / Minus

                                                                            
Query: 242      gtttattgtgcttgctgttgtctctcttgagttgtactttcagctttttaccacctaatt 301
                ||||| ||||||||  |||||||||||||||||||||||| || |||||||  |||||||
Sbjct: 41190976 gtttactgtgcttggagttgtctctcttgagttgtactttgagttttttactgcctaatt 41190917

                                                                            
Query: 302      ggaacccattcatcatacttatggctgcctgcgcaggagcaggtgaatcgtagcttacaa 361
                |||| || ||||||| ||  ||||||||||| || | |||||| ||||||||||||||||
Sbjct: 41190916 ggaaaccgttcatcacaccaatggctgcctgtgcggaagcaggagaatcgtagcttacaa 41190857

                    
Query: 362      aacc 365
                ||||
Sbjct: 41190856 aacc 41190853



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 103/123 (83%)
 Strand = Plus / Minus

                                                                            
Query: 605      aaggacgactattgatgccaccaccaggatatgacccaggatactgcataccaggcccag 664
                |||||||| |||| |||  ||||||||| || || |||| |||||||| ||||||  |||
Sbjct: 41190141 aaggacgattattcatgagaccaccagggtaggatccagcatactgcacaccaggtacag 41190082

                                                                            
Query: 665      ctggataagggctgcccaactgcattgaattgaatgacctagcaactgaattangggata 724
                 ||||||||||||||  ||||||||||  |||||||| |||| |||||||||| |||| |
Sbjct: 41190081 gtggataagggctgcttaactgcattgcgttgaatgatctaggaactgaattaggggaca 41190022

                   
Query: 725      gtt 727
                |||
Sbjct: 41190021 gtt 41190019



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 115/143 (80%)
 Strand = Plus / Minus

                                                                            
Query: 367      aagcatttactagcaccagttgctttgtctacaaatactttggcactcaatactctacca 426
                |||||||| || | ||| ||||||||||||||||| || || ||||| | ||||||||| 
Sbjct: 41190748 aagcatttgctggaacccgttgctttgtctacaaaaaccttagcacttagtactctaccg 41190689

                                                                            
Query: 427      aaactctgaaatgcatgtgctagatcttggtcgccgaattcttgcgggatgtgatagata 486
                || ||||| |||||||  |  || |||||||| ||  | ||||| ||||| |||||||||
Sbjct: 41190688 aacctctggaatgcattggaaaggtcttggtccccataatcttgtgggatatgatagata 41190629

                                       
Query: 487      aacaagttggctccaggaggacc 509
                || |  || ||||| ||||||||
Sbjct: 41190628 aatagattagctcctggaggacc 41190606
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>dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1150F11
          Length = 130355

 Score =  119 bits (60), Expect = 1e-23
 Identities = 108/124 (87%)
 Strand = Plus / Minus

                                                                        
Query: 242  gtttattgtgcttgctgttgtctctcttgagttgtactttcagctttttaccacctaatt 301
            ||||| ||||||||  |||||||||||||||||||||||| || |||||||  |||||||
Sbjct: 7891 gtttactgtgcttggagttgtctctcttgagttgtactttgagttttttactgcctaatt 7832

                                                                        
Query: 302  ggaacccattcatcatacttatggctgcctgcgcaggagcaggtgaatcgtagcttacaa 361
            |||| || ||||||| ||  ||||||||||| || | |||||| ||||||||||||||||
Sbjct: 7831 ggaaaccgttcatcacaccaatggctgcctgtgcggaagcaggagaatcgtagcttacaa 7772

                
Query: 362  aacc 365
            ||||
Sbjct: 7771 aacc 7768



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 103/123 (83%)
 Strand = Plus / Minus

                                                                        
Query: 605  aaggacgactattgatgccaccaccaggatatgacccaggatactgcataccaggcccag 664
            |||||||| |||| |||  ||||||||| || || |||| |||||||| ||||||  |||
Sbjct: 7056 aaggacgattattcatgagaccaccagggtaggatccagcatactgcacaccaggtacag 6997

                                                                        
Query: 665  ctggataagggctgcccaactgcattgaattgaatgacctagcaactgaattangggata 724
             ||||||||||||||  ||||||||||  |||||||| |||| |||||||||| |||| |
Sbjct: 6996 gtggataagggctgcttaactgcattgcgttgaatgatctaggaactgaattaggggaca 6937

               
Query: 725  gtt 727
            |||
Sbjct: 6936 gtt 6934



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 115/143 (80%)
 Strand = Plus / Minus

                                                                        
Query: 367  aagcatttactagcaccagttgctttgtctacaaatactttggcactcaatactctacca 426
            |||||||| || | ||| ||||||||||||||||| || || ||||| | ||||||||| 
Sbjct: 7663 aagcatttgctggaacccgttgctttgtctacaaaaaccttagcacttagtactctaccg 7604

                                                                        
Query: 427  aaactctgaaatgcatgtgctagatcttggtcgccgaattcttgcgggatgtgatagata 486
            || ||||| |||||||  |  || |||||||| ||  | ||||| ||||| |||||||||
Sbjct: 7603 aacctctggaatgcattggaaaggtcttggtccccataatcttgtgggatatgatagata 7544

                                   
Query: 487  aacaagttggctccaggaggacc 509
            || |  || ||||| ||||||||
Sbjct: 7543 aatagattagctcctggaggacc 7521
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>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0504E02
          Length = 137468

 Score =  119 bits (60), Expect = 1e-23
 Identities = 108/124 (87%)
 Strand = Plus / Minus

                                                                         
Query: 242   gtttattgtgcttgctgttgtctctcttgagttgtactttcagctttttaccacctaatt 301
             ||||| ||||||||  |||||||||||||||||||||||| || |||||||  |||||||
Sbjct: 88031 gtttactgtgcttggagttgtctctcttgagttgtactttgagttttttactgcctaatt 87972

                                                                         
Query: 302   ggaacccattcatcatacttatggctgcctgcgcaggagcaggtgaatcgtagcttacaa 361
             |||| || ||||||| ||  ||||||||||| || | |||||| ||||||||||||||||
Sbjct: 87971 ggaaaccgttcatcacaccaatggctgcctgtgcggaagcaggagaatcgtagcttacaa 87912

                 
Query: 362   aacc 365
             ||||
Sbjct: 87911 aacc 87908



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 103/123 (83%)
 Strand = Plus / Minus

                                                                         
Query: 605   aaggacgactattgatgccaccaccaggatatgacccaggatactgcataccaggcccag 664
             |||||||| |||| |||  ||||||||| || || |||| |||||||| ||||||  |||
Sbjct: 87196 aaggacgattattcatgagaccaccagggtaggatccagcatactgcacaccaggtacag 87137

                                                                         
Query: 665   ctggataagggctgcccaactgcattgaattgaatgacctagcaactgaattangggata 724
              ||||||||||||||  ||||||||||  |||||||| |||| |||||||||| |||| |
Sbjct: 87136 gtggataagggctgcttaactgcattgcgttgaatgatctaggaactgaattaggggaca 87077

                
Query: 725   gtt 727
             |||
Sbjct: 87076 gtt 87074



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 115/143 (80%)
 Strand = Plus / Minus

                                                                         
Query: 367   aagcatttactagcaccagttgctttgtctacaaatactttggcactcaatactctacca 426
             |||||||| || | ||| ||||||||||||||||| || || ||||| | ||||||||| 
Sbjct: 87803 aagcatttgctggaacccgttgctttgtctacaaaaaccttagcacttagtactctaccg 87744

                                                                         
Query: 427   aaactctgaaatgcatgtgctagatcttggtcgccgaattcttgcgggatgtgatagata 486
             || ||||| |||||||  |  || |||||||| ||  | ||||| ||||| |||||||||
Sbjct: 87743 aacctctggaatgcattggaaaggtcttggtccccataatcttgtgggatatgatagata 87684

                                    
Query: 487   aacaagttggctccaggaggacc 509
             || |  || ||||| ||||||||
Sbjct: 87683 aatagattagctcctggaggacc 87661
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>gb|AY107712.1| Zea mays PCO079656 mRNA sequence
          Length = 471

 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 114/139 (82%)
 Strand = Plus / Minus

                                                                       
Query: 257 tgttgtctctcttgagttgtactttcagctttttaccacctaattggaacccattcatca 316
           |||| |||||||| |||||||| || || |||||||| ||||| ||| | || |||||| 
Sbjct: 176 tgttttctctcttcagttgtaccttgagttttttaccgcctaactggtagccgttcatcc 117

                                                                       
Query: 317 tacttatggctgcctgcgcaggagcaggtgaatcgtagcttacaaaaccgaagcatttac 376
           |  | |||||||||||||| |  ||||| || |||||||| ||||||||||||||||| |
Sbjct: 116 tgttgatggctgcctgcgcggaggcaggagagtcgtagctcacaaaaccgaagcatttgc 57

                              
Query: 377 tagcaccagttgctttgtc 395
           |  | || |||||||||||
Sbjct: 56  tcacgcccgttgctttgtc 38
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>ref|NM_116545.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT4G03110
            transcript variant AT4G03110.1 mRNA, complete cds
          Length = 1759

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                        
Query: 352  tagcttacaaaaccgaagcatttactagcaccagttgctttgtctacaaatactttggca 411
            ||||| ||||||||||| ||||| ||  ||||||| |||||||||||||| || ||||||
Sbjct: 1317 tagctaacaaaaccgaaacatttgcttacaccagtggctttgtctacaaaaaccttggca 1258

                
Query: 412  ctca 415
            ||||
Sbjct: 1257 ctca 1254
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>gb|AY084669.1| Arabidopsis thaliana clone 114653 mRNA, complete sequence
          Length = 1746

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                        
Query: 352  tagcttacaaaaccgaagcatttactagcaccagttgctttgtctacaaatactttggca 411
            ||||| ||||||||||| ||||| ||  ||||||| |||||||||||||| || ||||||
Sbjct: 1318 tagctaacaaaaccgaaacatttgcttacaccagtggctttgtctacaaaaaccttggca 1259

                
Query: 412  ctca 415
            ||||
Sbjct: 1258 ctca 1255
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>gb|AC122543.1| Genomic sequence for Brassica oleracea, clone B21H13, complete sequence
          Length = 101563

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                         
Query: 257   tgttgtctctcttgagttgtactttcagctttttaccacctaattggaacccattcatca 316
             ||||||||||||| || || |||||||| || ||||||||||| ||| | ||||||||||
Sbjct: 50324 tgttgtctctcttaagctggactttcagtttcttaccacctaaatgggaaccattcatca 50383

              
Query: 317   t 317
             |
Sbjct: 50384 t 50384
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>gb|AY021985.1| Oryza sativa microsatellite MRG4310 containing (TC)X12, closest to
           marker R1014A, genomic sequence
          Length = 224

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                       
Query: 367 aagcatttactagcaccagttgctttgtctacaaatactttggcactcaatactctacca 426
           |||||||| || | ||| ||||||||||||||||| || || ||||| | ||||||||| 
Sbjct: 94  aagcatttgctggaacccgttgctttgtctacaaaaaccttagcacttagtactctaccg 35

                           
Query: 427 aaactctgaaatgcat 442
           || ||||| |||||||
Sbjct: 34  aacctctggaatgcat 19



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 339 agcaggtgaatcgtagcttacaaaacc 365
           |||||| ||||||||||||||||||||
Sbjct: 213 agcaggagaatcgtagcttacaaaacc 187
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>ref|NM_178963.1| Arabidopsis thaliana RNA binding / nucleic acid binding AT4G03110
            transcript variant AT4G03110.2 mRNA, complete cds
          Length = 1847

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 363  accgaagcatttactagcaccagttgctttgtctacaaatactttggcactca 415
            |||||| ||||| ||  ||||||| |||||||||||||| || ||||||||||
Sbjct: 1299 accgaaacatttgcttacaccagtggctttgtctacaaaaaccttggcactca 1247
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>gb|AF069442.1| Arabidopsis thaliana BAC T4I9, chromosome IV, near 17 cM, complete
            sequence
          Length = 98913

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 363  accgaagcatttactagcaccagttgctttgtctacaaatactttggcactca 415
            |||||| ||||| ||  ||||||| |||||||||||||| || ||||||||||
Sbjct: 6487 accgaaacatttgcttacaccagtggctttgtctacaaaaaccttggcactca 6435
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>gb|AC005275.1| Arabidopsis thaliana BAC F4C21 from chromosome IV, top arm, near 17
            cM, complete sequence
          Length = 136335

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                 
Query: 363  accgaagcatttactagcaccagttgctttgtctacaaatactttggcactca 415
            |||||| ||||| ||  ||||||| |||||||||||||| || ||||||||||
Sbjct: 9629 accgaaacatttgcttacaccagtggctttgtctacaaaaaccttggcactca 9681
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>emb|AL161496.2|ATCHRIV8 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 8
          Length = 195429

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 363   accgaagcatttactagcaccagttgctttgtctacaaatactttggcactca 415
             |||||| ||||| ||  ||||||| |||||||||||||| || ||||||||||
Sbjct: 28000 accgaaacatttgcttacaccagtggctttgtctacaaaaaccttggcactca 28052
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>gb|AY065261.1| Arabidopsis thaliana putative ribonucleoprotein (At4g03110) mRNA,
            complete cds
          Length = 1842

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 363  accgaagcatttactagcaccagttgctttgtctacaaatactttggcactca 415
            |||||| ||||| ||  ||||||| |||||||||||||| || ||||||||||
Sbjct: 1275 accgaaacatttgcttacaccagtggctttgtctacaaaaaccttggcactca 1223
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>gb|AC110540.7| Mus musculus chromosome 3, clone RP23-105B8, complete sequence
          Length = 232416

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 69    agcagttttcaagaatgttgaat 91
             |||||||||||||||||||||||
Sbjct: 73095 agcagttttcaagaatgttgaat 73117
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>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold
          Length = 1996640

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 555     agatgtagcatttgcattagga 576
               ||||||||||||||||||||||
Sbjct: 1893731 agatgtagcatttgcattagga 1893710
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>gb|AC023680.3| Drosophila melanogaster 3L BAC RPCI98-9C2 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 186218

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 79    aagaatgttgaattgaattgaa 100
             ||||||||||||||||||||||
Sbjct: 78031 aagaatgttgaattgaattgaa 78052
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>emb|BX005421.6| Zebrafish DNA sequence from clone DKEY-36H5, complete sequence
          Length = 161727

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 86    ttgaattgaattgaaccaagat 107
             ||||||||||||||||||||||
Sbjct: 25440 ttgaattgaattgaaccaagat 25461
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>gb|AC145184.3| Macropus eugenii clone ME_KBa-71M6, complete sequence
          Length = 137074

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 555   agatgtagcatttgcattagga 576
             ||||||||||||||||||||||
Sbjct: 34165 agatgtagcatttgcattagga 34144
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>gb|AE003479.3| Drosophila melanogaster chromosome 3L, section 13 of 83 of the complete
              sequence
          Length = 309958

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 79     aagaatgttgaattgaattgaa 100
              ||||||||||||||||||||||
Sbjct: 304660 aagaatgttgaattgaattgaa 304681
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>gb|AC140245.3| Mus musculus BAC clone RP23-293J3 from chromosome 18, complete sequence
          Length = 195082

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 420    tctaccaaaactctgaaatgc 440
              |||||||||||||||||||||
Sbjct: 165447 tctaccaaaactctgaaatgc 165467
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>ref|XM_762212.1| Giardia lamblia ATCC 50803 serine protease (GLP_321_10476_7936)
           partial mRNA
          Length = 2541

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 227 gctgctgtcagtaaagtttattgtg 251
           |||||||||| ||||||||||||||
Sbjct: 325 gctgctgtcaataaagtttattgtg 349
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>emb|Z97630.11|HS466N1 Human DNA sequence from clone RP3-466N1 on chromosome 22q12-13,
             complete sequence
          Length = 79528

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 249   gtgcttgctgttgtctctctt 269
             |||||||||||||||||||||
Sbjct: 45025 gtgcttgctgttgtctctctt 45005
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>emb|CR735104.7| Zebrafish DNA sequence from clone DKEYP-72G9 in linkage group 21,
             complete sequence
          Length = 190684

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 87    tgaattgaattgaaccaagat 107
             |||||||||||||||||||||
Sbjct: 77159 tgaattgaattgaaccaagat 77139
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>emb|BX088694.4| Zebrafish DNA sequence from clone CH211-193C2 in linkage group 4
             Contains the gene for a novel protein similar to
             vertebrate discoidin domain receptor family, member 2, a
             novel gene and two CpG islands, complete sequence
          Length = 150975

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 86    ttgaattgaattgaaccaagatacaacaa 114
             ||||||||||||||| ||| |||||||||
Sbjct: 22812 ttgaattgaattgaaacaaaatacaacaa 22784
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>dbj|AB248638.1| Uncultured bacterium gene for 16S rRNA, partial sequence,
           clone:BHB09
          Length = 1578

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 404 ctttggcactcaatactctac 424
           |||||||||||||||||||||
Sbjct: 202 ctttggcactcaatactctac 182
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>gb|AC151840.5| Mus musculus BAC clone RP23-150L19 from chromosome 18, complete
             sequence
          Length = 197898

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 420   tctaccaaaactctgaaatgc 440
             |||||||||||||||||||||
Sbjct: 44881 tctaccaaaactctgaaatgc 44901
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>gb|AC026951.5|AC026951 Homo sapiens chromosome 15, clone RP11-456J20, complete sequence
          Length = 206590

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 55    aaataaaacaacttagcagttttca 79
             ||||||||||| |||||||||||||
Sbjct: 92858 aaataaaacaatttagcagttttca 92882
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>emb|CT573421.5| M.truncatula DNA sequence from clone MTH2-27B10 on chromosome 3,
             complete sequence
          Length = 123669

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 551   tgggagatgtagcatttgcat 571
             |||||||||||||||||||||
Sbjct: 35214 tgggagatgtagcatttgcat 35194
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>emb|CT030238.7| Mouse DNA sequence from clone RP23-428E20 on chromosome 14, complete
             sequence
          Length = 194408

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 242   gtttattgtgcttgctgttgt 262
             |||||||||||||||||||||
Sbjct: 69101 gtttattgtgcttgctgttgt 69121
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>ref|XM_636302.1| Dictyostelium discoideum G-protein subunit alpha 12 (DDB0230131),
            partial mRNA
          Length = 1065

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 81   gaatgttgaattgaattgaa 100
            ||||||||||||||||||||
Sbjct: 1034 gaatgttgaattgaattgaa 1015
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>ref|NG_001335.1| Homo sapiens genomic large histone family cluster (HFL@) on chromosome
             6
          Length = 269712

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   acatggtggaggccagaaga 152
             ||||||||||||||||||||
Sbjct: 43164 acatggtggaggccagaaga 43183
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>gb|AC165239.3| Mus musculus chromosome 19, clone RP24-73C2, complete sequence
          Length = 208461

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 58     taaaacaacttagcagttttcaag 81
              |||||||| |||||||||||||||
Sbjct: 166549 taaaacaatttagcagttttcaag 166526
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>gb|AC073901.5| Homo sapiens BAC clone RP11-222O23 from 7, complete sequence
          Length = 170654

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     cttagcagttttcaagaatg 85
              ||||||||||||||||||||
Sbjct: 136819 cttagcagttttcaagaatg 136838
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>gb|AC149806.16| Medicago truncatula clone mth2-150h12, complete sequence
          Length = 113593

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     gaatgttgaattgaattgaa 100
              ||||||||||||||||||||
Sbjct: 102103 gaatgttgaattgaattgaa 102122
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>gb|AC139526.22| Medicago truncatula clone mth2-9b23, complete sequence
          Length = 141491

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    ccactgctgctgtcagtaaa 241
              ||||||||||||||||||||
Sbjct: 114697 ccactgctgctgtcagtaaa 114716
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>ref|XM_501542.1| Yarrowia lipolytica CLIB122, YALI0C07040g predicted mRNA
          Length = 1821

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  gtgaatcgtagcttacaaaa 363
            ||||||||||||||||||||
Sbjct: 1729 gtgaatcgtagcttacaaaa 1710
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>emb|AL596168.1| Listeria innocua Clip11262 complete genome, segment 6/12
          Length = 333050

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 369    gcatttactagcaccagttg 388
              ||||||||||||||||||||
Sbjct: 200504 gcatttactagcaccagttg 200523
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>gb|AC009646.12| Homo sapiens chromosome 8, clone RP11-162D9, complete sequence
          Length = 183519

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   cttagcagttttcaagaatg 85
            ||||||||||||||||||||
Sbjct: 5095 cttagcagttttcaagaatg 5114
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>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 548     atgtgggagatgtagcattt 567
               ||||||||||||||||||||
Sbjct: 1575463 atgtgggagatgtagcattt 1575482
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>gb|AC016113.9| Homo sapiens, clone RP11-26P22, complete sequence
          Length = 185419

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    cttagcagttttcaagaatg 85
             ||||||||||||||||||||
Sbjct: 36365 cttagcagttttcaagaatg 36346
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>gb|U91328.1|HSU91328 Human hereditary haemochromatosis region, histone 2A-like protein gene,
             hereditary haemochromatosis (HLA-H) gene, RoRet gene, and
             sodium phosphate transporter (NPT3) gene, complete cds
          Length = 246282

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   acatggtggaggccagaaga 152
             ||||||||||||||||||||
Sbjct: 81837 acatggtggaggccagaaga 81818
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>gb|AC163694.2| Mus musculus BAC clone RP24-80O2 from chromosome 16, complete sequence
          Length = 244730

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   tgttgtctctcttgagttgt 276
             ||||||||||||||||||||
Sbjct: 59887 tgttgtctctcttgagttgt 59868
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>gb|AC152161.4| Mus musculus chromosome 19, clone RP23-162O21, complete sequence
          Length = 194652

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 58    taaaacaacttagcagttttcaag 81
             |||||||| |||||||||||||||
Sbjct: 86330 taaaacaatttagcagttttcaag 86307
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>gb|AC005406.2| Homo sapiens clone b128f11, complete sequence
          Length = 226345

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      atgtctgatgtacaatgggt 20
              ||||||||||||||||||||
Sbjct: 197063 atgtctgatgtacaatgggt 197044
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>gb|AC010598.6| Homo sapiens chromosome 5 clone CTC-560O9, complete sequence
          Length = 174551

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     atgtctgatgtacaatgggt 20
             ||||||||||||||||||||
Sbjct: 36514 atgtctgatgtacaatgggt 36495
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>gb|AC154376.3| Mus musculus BAC clone RP23-71H16 from chromosome 13, complete sequence
          Length = 169417

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    atggtacagaggctacaact 43
             ||||||||||||||||||||
Sbjct: 19837 atggtacagaggctacaact 19818
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>gb|AC011996.8| Homo sapiens BAC clone RP11-250H22 from 2, complete sequence
          Length = 167826

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 223    cactgctgctgtcagtaaag 242
              ||||||||||||||||||||
Sbjct: 160719 cactgctgctgtcagtaaag 160700
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>emb|AL731729.10| Mouse DNA sequence from clone RP23-92L12 on chromosome X, complete
             sequence
          Length = 216656

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    gaaataaaacaacttagcag 73
             ||||||||||||||||||||
Sbjct: 56693 gaaataaaacaacttagcag 56712
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>dbj|AK129392.1| Mus musculus mRNA for mKIAA1558 protein
          Length = 5111

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   agaatgttgaattgaattga 99
            ||||||||||||||||||||
Sbjct: 4260 agaatgttgaattgaattga 4279
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>gb|AC124627.22| Mus musculus chromosome 19, clone RP23-435K14, complete sequence
          Length = 228991

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    agaatgttgaattgaattga 99
             ||||||||||||||||||||
Sbjct: 24210 agaatgttgaattgaattga 24229
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>dbj|AP002850.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB87D5
          Length = 98988

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   ctgtcagtaaagtttattgt 250
             ||||||||||||||||||||
Sbjct: 82535 ctgtcagtaaagtttattgt 82516
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>gb|AC117797.9| Mus musculus chromosome 19, clone RP24-555M16, complete sequence
          Length = 179740

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    agaatgttgaattgaattga 99
             ||||||||||||||||||||
Sbjct: 70361 agaatgttgaattgaattga 70342
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>emb|CT030641.11| Mouse DNA sequence from clone RP23-32M15 on chromosome 16, complete
             sequence
          Length = 224292

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   tgttgtctctcttgagttgt 276
             ||||||||||||||||||||
Sbjct: 21143 tgttgtctctcttgagttgt 21162
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 344    gtgaatcgtagcttacaaaa 363
              ||||||||||||||||||||
Sbjct: 943802 gtgaatcgtagcttacaaaa 943783
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>dbj|AP004916.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT18E24, TM0074,
              complete sequence
          Length = 131741

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 79     aagaatgttgaattgaattgaacc 102
              |||| |||||||||||||||||||
Sbjct: 109884 aagattgttgaattgaattgaacc 109907
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>dbj|AP002905.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1672E10
          Length = 158401

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   ctgtcagtaaagtttattgt 250
             ||||||||||||||||||||
Sbjct: 91475 ctgtcagtaaagtttattgt 91494


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,551,862
Number of Sequences: 3902068
Number of extensions: 6551862
Number of successful extensions: 146075
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 145750
Number of HSP's gapped (non-prelim): 314
length of query: 727
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 704
effective length of database: 17,143,297,704
effective search space: 12068881583616
effective search space used: 12068881583616
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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