| Clone Name | rbags7j11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_477102.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1570 Score = 456 bits (230), Expect = e-125 Identities = 392/446 (87%) Strand = Plus / Minus Query: 174 atgagctatctatttgtgatacaggtacgcaactgagaatatgaagaaggctcccattgt 233 ||||| |||||||||||| ||||||||| ||| |||||| |||||||||||||||||||| Sbjct: 1371 atgagttatctatttgtggtacaggtacacaaatgagaagatgaagaaggctcccattgt 1312 Query: 234 tgaaaatgaggcagcatagtatggaaacgctgaagttatgaacctctcatactcgtcatg 293 |||||| || ||||||||||| ||| | || ||||||||||| || |||||||| | ||| Sbjct: 1311 tgaaaacgacgcagcatagtacggatatgccgaagttatgaatctttcatactcattatg 1252 Query: 294 cctgtatggccgcactggaatctgctttgcaagagagacgccagtgtatccaagcctttg 353 |||||| || ||||||||||||||||| | |||||||| ||||| ||||||||||| || Sbjct: 1251 cctgtaagggcgcactggaatctgcttagaaagagagagaccagtatatccaagcctctg 1192 Query: 354 gtactcaactttgaactggaaaactccataaacatccggaactttgaaggatgctgaata 413 |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| | Sbjct: 1191 gtactcaactttgaactggaaaactccataaacatctggaactttgaaggatgttgaaaa 1132 Query: 414 tagagcagttttgtcggttgacatatttttcagaacgtaagggctcatcatgaaaaactg 473 || | | | ||||| || |||| | |||||||| ||||||||||||||| ||||||| Sbjct: 1131 tacacccttcttgtcagtcgacagtgtcttcagaacataagggctcatcatgtaaaactg 1072 Query: 474 aatctgaacatcatcggcaacatatggcttccagcttgttccagaccattcgtatatctc 533 || ||||||||||| |||||||| ||||||||||| || |||||||||||||| ||||| Sbjct: 1071 aacttgaacatcatcagcaacatacggcttccagctggtcccagaccattcgtagatctc 1012 Query: 534 aactgagtattccaagtcatcattgatgcggtacatgctaggttcatctgtctccccaac 593 ||| |||||||||||||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct: 1011 aacagagtattccaagtcatcattgatgcggtacatgccaggctcatttgtctccccaac 952 Query: 594 cttatggtgcctgacattcactgcct 619 ||| | ||| ||||||||||||||| Sbjct: 951 cttgttatgcttgacattcactgcct 926
>ref|XM_506221.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_A05.4 mRNA Length = 1648 Score = 456 bits (230), Expect = e-125 Identities = 392/446 (87%) Strand = Plus / Minus Query: 174 atgagctatctatttgtgatacaggtacgcaactgagaatatgaagaaggctcccattgt 233 ||||| |||||||||||| ||||||||| ||| |||||| |||||||||||||||||||| Sbjct: 1378 atgagttatctatttgtggtacaggtacacaaatgagaagatgaagaaggctcccattgt 1319 Query: 234 tgaaaatgaggcagcatagtatggaaacgctgaagttatgaacctctcatactcgtcatg 293 |||||| || ||||||||||| ||| | || ||||||||||| || |||||||| | ||| Sbjct: 1318 tgaaaacgacgcagcatagtacggatatgccgaagttatgaatctttcatactcattatg 1259 Query: 294 cctgtatggccgcactggaatctgctttgcaagagagacgccagtgtatccaagcctttg 353 |||||| || ||||||||||||||||| | |||||||| ||||| ||||||||||| || Sbjct: 1258 cctgtaagggcgcactggaatctgcttagaaagagagagaccagtatatccaagcctctg 1199 Query: 354 gtactcaactttgaactggaaaactccataaacatccggaactttgaaggatgctgaata 413 |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| | Sbjct: 1198 gtactcaactttgaactggaaaactccataaacatctggaactttgaaggatgttgaaaa 1139 Query: 414 tagagcagttttgtcggttgacatatttttcagaacgtaagggctcatcatgaaaaactg 473 || | | | ||||| || |||| | |||||||| ||||||||||||||| ||||||| Sbjct: 1138 tacacccttcttgtcagtcgacagtgtcttcagaacataagggctcatcatgtaaaactg 1079 Query: 474 aatctgaacatcatcggcaacatatggcttccagcttgttccagaccattcgtatatctc 533 || ||||||||||| |||||||| ||||||||||| || |||||||||||||| ||||| Sbjct: 1078 aacttgaacatcatcagcaacatacggcttccagctggtcccagaccattcgtagatctc 1019 Query: 534 aactgagtattccaagtcatcattgatgcggtacatgctaggttcatctgtctccccaac 593 ||| |||||||||||||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct: 1018 aacagagtattccaagtcatcattgatgcggtacatgccaggctcatttgtctccccaac 959 Query: 594 cttatggtgcctgacattcactgcct 619 ||| | ||| ||||||||||||||| Sbjct: 958 cttgttatgcttgacattcactgcct 933
>dbj|AK059111.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-E02, full insert sequence Length = 1648 Score = 456 bits (230), Expect = e-125 Identities = 392/446 (87%) Strand = Plus / Minus Query: 174 atgagctatctatttgtgatacaggtacgcaactgagaatatgaagaaggctcccattgt 233 ||||| |||||||||||| ||||||||| ||| |||||| |||||||||||||||||||| Sbjct: 1378 atgagttatctatttgtggtacaggtacacaaatgagaagatgaagaaggctcccattgt 1319 Query: 234 tgaaaatgaggcagcatagtatggaaacgctgaagttatgaacctctcatactcgtcatg 293 |||||| || ||||||||||| ||| | || ||||||||||| || |||||||| | ||| Sbjct: 1318 tgaaaacgacgcagcatagtacggatatgccgaagttatgaatctttcatactcattatg 1259 Query: 294 cctgtatggccgcactggaatctgctttgcaagagagacgccagtgtatccaagcctttg 353 |||||| || ||||||||||||||||| | |||||||| ||||| ||||||||||| || Sbjct: 1258 cctgtaagggcgcactggaatctgcttagaaagagagagaccagtatatccaagcctctg 1199 Query: 354 gtactcaactttgaactggaaaactccataaacatccggaactttgaaggatgctgaata 413 |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| | Sbjct: 1198 gtactcaactttgaactggaaaactccataaacatctggaactttgaaggatgttgaaaa 1139 Query: 414 tagagcagttttgtcggttgacatatttttcagaacgtaagggctcatcatgaaaaactg 473 || | | | ||||| || |||| | |||||||| ||||||||||||||| ||||||| Sbjct: 1138 tacacccttcttgtcagtcgacagtgtcttcagaacataagggctcatcatgtaaaactg 1079 Query: 474 aatctgaacatcatcggcaacatatggcttccagcttgttccagaccattcgtatatctc 533 || ||||||||||| |||||||| ||||||||||| || |||||||||||||| ||||| Sbjct: 1078 aacttgaacatcatcagcaacatacggcttccagctggtcccagaccattcgtagatctc 1019 Query: 534 aactgagtattccaagtcatcattgatgcggtacatgctaggttcatctgtctccccaac 593 ||| |||||||||||||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct: 1018 aacagagtattccaagtcatcattgatgcggtacatgccaggctcatttgtctccccaac 959 Query: 594 cttatggtgcctgacattcactgcct 619 ||| | ||| ||||||||||||||| Sbjct: 958 cttgttatgcttgacattcactgcct 933
>dbj|AK099319.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033003F07, full insert sequence Length = 1570 Score = 448 bits (226), Expect = e-122 Identities = 391/446 (87%) Strand = Plus / Minus Query: 174 atgagctatctatttgtgatacaggtacgcaactgagaatatgaagaaggctcccattgt 233 ||||| |||||||||||| ||||||||| ||| |||||| |||||||||||||||||||| Sbjct: 1371 atgagttatctatttgtggtacaggtacacaaatgagaagatgaagaaggctcccattgt 1312 Query: 234 tgaaaatgaggcagcatagtatggaaacgctgaagttatgaacctctcatactcgtcatg 293 |||||| || ||||||||||| ||| | || ||||||||||| || |||||||| | ||| Sbjct: 1311 tgaaaacgacgcagcatagtacggatatgccgaagttatgaatctttcatactcattatg 1252 Query: 294 cctgtatggccgcactggaatctgctttgcaagagagacgccagtgtatccaagcctttg 353 |||||| || ||||||||||||||||| | |||||||| ||||| ||||||||||| || Sbjct: 1251 cctgtaagggcgcactggaatctgcttagaaagagagagaccagtatatccaagcctctg 1192 Query: 354 gtactcaactttgaactggaaaactccataaacatccggaactttgaaggatgctgaata 413 |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| | Sbjct: 1191 gtactcaactttgaactggaaaactccataaacatctggaactttgaaggatgttgaaaa 1132 Query: 414 tagagcagttttgtcggttgacatatttttcagaacgtaagggctcatcatgaaaaactg 473 || | | | ||||| || |||| | |||||||| ||||||||||||||| ||||||| Sbjct: 1131 tacacccttcttgtcagtcgacagtgtcttcagaacataagggctcatcatgtaaaactg 1072 Query: 474 aatctgaacatcatcggcaacatatggcttccagcttgttccagaccattcgtatatctc 533 || ||||||||||| |||||||| ||||||||||| || |||||||||||||| ||||| Sbjct: 1071 aacttgaacatcatcagcaacatacggcttccagctggtcccagaccattcgtagatctc 1012 Query: 534 aactgagtattccaagtcatcattgatgcggtacatgctaggttcatctgtctccccaac 593 ||| |||||||||||||||||||||||||||| ||||| ||| |||| |||||||||||| Sbjct: 1011 aacagagtattccaagtcatcattgatgcggtgcatgccaggctcatttgtctccccaac 952 Query: 594 cttatggtgcctgacattcactgcct 619 ||| | ||| ||||||||||||||| Sbjct: 951 cttgttatgcttgacattcactgcct 926
>gb|AY103792.1| Zea mays PCO149739 mRNA sequence Length = 2093 Score = 396 bits (200), Expect = e-107 Identities = 371/428 (86%) Strand = Plus / Minus Query: 184 tatttgtgatacaggtacgcaactgagaatatgaagaaggctcccattgttgaaaatgag 243 |||||||| ||||||||| ||| ||||||| |||||| || |||||||||||||||||| Sbjct: 1683 tatttgtggtacaggtacacaaacgagaatacgaagaaagcacccattgttgaaaatgag 1624 Query: 244 gcagcatagtatggaaacgctgaagttatgaacctctcatactcgtcatgcctgtatggc 303 |||| |||||||| ||||||| |||||||| ||||||||||| | ||| ||||| || Sbjct: 1623 gcagtgtagtatgggtacgctgatgttatgaatctctcatactcattatgtctgtaagga 1564 Query: 304 cgcactggaatctgctttgcaagagagacgccagtgtatccaagcctttggtactcaact 363 || |||||||||||||||| || ||| | ||||| ||||| || ||||||||||||||| Sbjct: 1563 cgtactggaatctgctttgtaaaagacagaccagtatatcccagtctttggtactcaact 1504 Query: 364 ttgaactggaaaactccataaacatccggaactttgaaggatgctgaatatagagcagtt 423 |||||||||||||||||||||||||| ||||||||||||| || |||||| | | | | Sbjct: 1503 ttgaactggaaaactccataaacatctggaactttgaaggttgttgaatacaaacccttg 1444 Query: 424 ttgtcggttgacatatttttcagaacgtaagggctcatcatgaaaaactgaatctgaaca 483 ||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct: 1443 ttgtcagtcgacatagttttcagaacgtaagggctcatcatgaaaaattgaagctgcaca 1384 Query: 484 tcatcggcaacatatggcttccagcttgttccagaccattcgtatatctcaactgagtat 543 ||||| |||||||| ||||||||||||||||| |||||||| || |||||||| |||||| Sbjct: 1383 tcatcagcaacatacggcttccagcttgttccggaccattcatagatctcaacagagtat 1324 Query: 544 tccaagtcatcattgatgcggtacatgctaggttcatctgtctccccaaccttatggtgc 603 |||| ||||||||| ||||||||||||| ||||||| |||||||||||||| || ||| Sbjct: 1323 tccaggtcatcattaatgcggtacatgcctggttcattggtctccccaaccttgtgatgc 1264 Query: 604 ctgacatt 611 || ||||| Sbjct: 1263 ctaacatt 1256
>gb|BT017987.1| Zea mays clone EL01N0525H08.c mRNA sequence Length = 1602 Score = 394 bits (199), Expect = e-106 Identities = 370/427 (86%) Strand = Plus / Minus Query: 185 atttgtgatacaggtacgcaactgagaatatgaagaaggctcccattgttgaaaatgagg 244 ||||||| ||||||||| ||| ||||||| |||||| || ||||||||||||||||||| Sbjct: 1327 atttgtggtacaggtacacaaacgagaatacgaagaaagcacccattgttgaaaatgagg 1268 Query: 245 cagcatagtatggaaacgctgaagttatgaacctctcatactcgtcatgcctgtatggcc 304 | | |||||||| ||||||| |||||||| ||||||||||| | ||| ||||| || | Sbjct: 1267 cggtgtagtatgggtacgctgatgttatgaatctctcatactcattatgtctgtaaggac 1208 Query: 305 gcactggaatctgctttgcaagagagacgccagtgtatccaagcctttggtactcaactt 364 | |||||||||||||||| || ||| | ||||| ||||| || |||||||||||||||| Sbjct: 1207 gtactggaatctgctttgtaaaagacagaccagtatatcccagtctttggtactcaactt 1148 Query: 365 tgaactggaaaactccataaacatccggaactttgaaggatgctgaatatagagcagttt 424 ||||||||||||||||||||||||| ||||||||||||| || |||||| | | | | | Sbjct: 1147 tgaactggaaaactccataaacatctggaactttgaaggttgttgaatacaaacccttgt 1088 Query: 425 tgtcggttgacatatttttcagaacgtaagggctcatcatgaaaaactgaatctgaacat 484 |||| || |||||| ||||||||||||||||||||||||||||||| |||| ||| |||| Sbjct: 1087 tgtcagtcgacatagttttcagaacgtaagggctcatcatgaaaaattgaagctgcacat 1028 Query: 485 catcggcaacatatggcttccagcttgttccagaccattcgtatatctcaactgagtatt 544 |||| |||||||| ||||||||||||||||| |||||||| || |||||||| ||||||| Sbjct: 1027 catcagcaacatacggcttccagcttgttccggaccattcatagatctcaacagagtatt 968 Query: 545 ccaagtcatcattgatgcggtacatgctaggttcatctgtctccccaaccttatggtgcc 604 ||| ||||||||| ||||||||||||| ||||||| ||||||||||||||| || |||| Sbjct: 967 ccaggtcatcattaatgcggtacatgcctggttcatttgtctccccaaccttgtgatgcc 908 Query: 605 tgacatt 611 | ||||| Sbjct: 907 taacatt 901
>gb|BT017639.1| Zea mays clone EL01N0438G02.c mRNA sequence Length = 1151 Score = 394 bits (199), Expect = e-106 Identities = 370/427 (86%) Strand = Plus / Minus Query: 185 atttgtgatacaggtacgcaactgagaatatgaagaaggctcccattgttgaaaatgagg 244 ||||||| ||||||||| ||| ||||||| |||||| || ||||||||||||||||||| Sbjct: 841 atttgtggtacaggtacacaaacgagaatacgaagaaagcacccattgttgaaaatgagg 782 Query: 245 cagcatagtatggaaacgctgaagttatgaacctctcatactcgtcatgcctgtatggcc 304 | | |||||||| ||||||| |||||||| ||||||||||| | ||| ||||| || | Sbjct: 781 cggtgtagtatgggtacgctgatgttatgaatctctcatactcattatgtctgtaaggac 722 Query: 305 gcactggaatctgctttgcaagagagacgccagtgtatccaagcctttggtactcaactt 364 | |||||||||||||||| || ||| | ||||| ||||| || |||||||||||||||| Sbjct: 721 gtactggaatctgctttgtaaaagacagaccagtatatcccagtctttggtactcaactt 662 Query: 365 tgaactggaaaactccataaacatccggaactttgaaggatgctgaatatagagcagttt 424 ||||||||||||||||||||||||| ||||||||||||| || |||||| | | | | | Sbjct: 661 tgaactggaaaactccataaacatctggaactttgaaggttgttgaatacaaacccttgt 602 Query: 425 tgtcggttgacatatttttcagaacgtaagggctcatcatgaaaaactgaatctgaacat 484 |||| || |||||| ||||||||||||||||||||||||||||||| |||| ||| |||| Sbjct: 601 tgtcagtcgacatagttttcagaacgtaagggctcatcatgaaaaattgaagctgcacat 542 Query: 485 catcggcaacatatggcttccagcttgttccagaccattcgtatatctcaactgagtatt 544 |||| |||||||| ||||||||||||||||| |||||||| || |||||||| ||||||| Sbjct: 541 catcagcaacatacggcttccagcttgttccggaccattcatagatctcaacagagtatt 482 Query: 545 ccaagtcatcattgatgcggtacatgctaggttcatctgtctccccaaccttatggtgcc 604 ||| ||||||||| ||||||||||||| ||||||| ||||||||||||||| || |||| Sbjct: 481 ccaggtcatcattaatgcggtacatgcctggttcatttgtctccccaaccttgtgatgcc 422 Query: 605 tgacatt 611 | ||||| Sbjct: 421 taacatt 415
>gb|BT016870.1| Zea mays clone Contig703 mRNA sequence Length = 911 Score = 337 bits (170), Expect = 3e-89 Identities = 311/358 (86%) Strand = Plus / Minus Query: 232 gttgaaaatgaggcagcatagtatggaaacgctgaagttatgaacctctcatactcgtca 291 |||||||||||||||| |||||||| ||||||| |||||||||||||||||||||| | Sbjct: 358 gttgaaaatgaggcagtgtagtatgggtacgctgatgttatgaacctctcatactcgtta 299 Query: 292 tgcctgtatggccgcactggaatctgctttgcaagagagacgccagtgtatccaagcctt 351 |||||||| || ||||||||||||||||||| || ||| | ||||| ||||| ||||| Sbjct: 298 tgcctgtaagggcgcactggaatctgctttgtaaaagacaaaccagtatatcccagcctc 239 Query: 352 tggtactcaactttgaactggaaaactccataaacatccggaactttgaaggatgctgaa 411 ||||||||||||||||||||||||||||| || ||||| |||||||||||||||| ||| Sbjct: 238 tggtactcaactttgaactggaaaactccgtagacatcaggaactttgaaggatgttgag 179 Query: 412 tatagagcagttttgtcggttgacatatttttcagaacgtaagggctcatcatgaaaaac 471 |||| | | | ||||| | |||||| |||||||||| ||||| ||||||||||||||| Sbjct: 178 tataaacccttgttgtcattcgacatagttttcagaacataaggactcatcatgaaaaac 119 Query: 472 tgaatctgaacatcatcggcaacatatggcttccagcttgttccagaccattcgtatatc 531 || | || |||||||| ||||||||||||||||||||||||||||||||||| || ||| Sbjct: 118 tggagttgcacatcatcagcaacatatggcttccagcttgttccagaccattcatagatc 59 Query: 532 tcaactgagtattccaagtcatcattgatgcggtacatgctaggttcatctgtctccc 589 ||||| |||||||||| |||||| || ||||||||||||| ||||||| ||||||| Sbjct: 58 tcaacagagtattccaggtcatcgttaatgcggtacatgcctggttcattggtctccc 1 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Minus Query: 184 tatttgtgatacaggtacgcaactgagaatatgaagaa 221 |||||||| ||||||||| ||| |||||||||||||| Sbjct: 607 tatttgtggtacaggtacacaagcgagaatatgaagaa 570
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 129 bits (65), Expect = 1e-26 Identities = 89/97 (91%) Strand = Plus / Minus Query: 315 ctgctttgcaagagagacgccagtgtatccaagcctttggtactcaactttgaactggaa 374 |||||| | |||||||| ||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 5921221 ctgcttagaaagagagagaccagtatatccaagcctctggtactcaactttgaactggaa 5921162 Query: 375 aactccataaacatccggaactttgaaggatgctgaa 411 ||||||||||||||| |||||||||||||||| |||| Sbjct: 5921161 aactccataaacatctggaactttgaaggatgttgaa 5921125 Score = 129 bits (65), Expect = 1e-26 Identities = 95/105 (90%) Strand = Plus / Minus Query: 442 ttcagaacgtaagggctcatcatgaaaaactgaatctgaacatcatcggcaacatatggc 501 |||||||| ||||||||||||||| ||||||||| ||||||||||| |||||||| ||| Sbjct: 5921011 ttcagaacataagggctcatcatgtaaaactgaacttgaacatcatcagcaacatacggc 5920952 Query: 502 ttccagcttgttccagaccattcgtatatctcaactgagtattcc 546 |||||||| || |||||||||||||| |||||||| ||||||||| Sbjct: 5920951 ttccagctggtcccagaccattcgtagatctcaacagagtattcc 5920907 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 545 ccaagtcatcattgatgcggtacatgctaggttcatctgtctccccaaccttatggtgcc 604 ||||||||||||||||||||||||||| ||| |||| ||||||||||||||| | ||| Sbjct: 5920837 ccaagtcatcattgatgcggtacatgccaggctcatttgtctccccaaccttgttatgct 5920778 Query: 605 tgacattcactgcct 619 ||||||||||||||| Sbjct: 5920777 tgacattcactgcct 5920763 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Minus Query: 231 tgttgaaaatgaggcagcatagtatggaaacgctgaagttatgaacctctcatactcgtc 290 ||||||||| || ||||||||||| ||| | || ||||||||||| || |||||||| | Sbjct: 5921416 tgttgaaaacgacgcagcatagtacggatatgccgaagttatgaatctttcatactcatt 5921357 Query: 291 atgcctgtatggccgcactggaatctgc 318 ||||||||| || ||||||||||||||| Sbjct: 5921356 atgcctgtaagggcgcactggaatctgc 5921329 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 174 atgagctatctatttgtgatacaggtacgcaactgagaatatgaagaaggctcccat 230 ||||| |||||||||||| ||||||||| ||| |||||| ||||||||||||||||| Sbjct: 5921692 atgagttatctatttgtggtacaggtacacaaatgagaagatgaagaaggctcccat 5921636
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_A05 Length = 120823 Score = 129 bits (65), Expect = 1e-26 Identities = 89/97 (91%) Strand = Plus / Minus Query: 315 ctgctttgcaagagagacgccagtgtatccaagcctttggtactcaactttgaactggaa 374 |||||| | |||||||| ||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 63669 ctgcttagaaagagagagaccagtatatccaagcctctggtactcaactttgaactggaa 63610 Query: 375 aactccataaacatccggaactttgaaggatgctgaa 411 ||||||||||||||| |||||||||||||||| |||| Sbjct: 63609 aactccataaacatctggaactttgaaggatgttgaa 63573 Score = 129 bits (65), Expect = 1e-26 Identities = 95/105 (90%) Strand = Plus / Minus Query: 442 ttcagaacgtaagggctcatcatgaaaaactgaatctgaacatcatcggcaacatatggc 501 |||||||| ||||||||||||||| ||||||||| ||||||||||| |||||||| ||| Sbjct: 63459 ttcagaacataagggctcatcatgtaaaactgaacttgaacatcatcagcaacatacggc 63400 Query: 502 ttccagcttgttccagaccattcgtatatctcaactgagtattcc 546 |||||||| || |||||||||||||| |||||||| ||||||||| Sbjct: 63399 ttccagctggtcccagaccattcgtagatctcaacagagtattcc 63355 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 545 ccaagtcatcattgatgcggtacatgctaggttcatctgtctccccaaccttatggtgcc 604 ||||||||||||||||||||||||||| ||| |||| ||||||||||||||| | ||| Sbjct: 63285 ccaagtcatcattgatgcggtacatgccaggctcatttgtctccccaaccttgttatgct 63226 Query: 605 tgacattcactgcct 619 ||||||||||||||| Sbjct: 63225 tgacattcactgcct 63211 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Minus Query: 231 tgttgaaaatgaggcagcatagtatggaaacgctgaagttatgaacctctcatactcgtc 290 ||||||||| || ||||||||||| ||| | || ||||||||||| || |||||||| | Sbjct: 63864 tgttgaaaacgacgcagcatagtacggatatgccgaagttatgaatctttcatactcatt 63805 Query: 291 atgcctgtatggccgcactggaatctgc 318 ||||||||| || ||||||||||||||| Sbjct: 63804 atgcctgtaagggcgcactggaatctgc 63777 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 174 atgagctatctatttgtgatacaggtacgcaactgagaatatgaagaaggctcccat 230 ||||| |||||||||||| ||||||||| ||| |||||| ||||||||||||||||| Sbjct: 64140 atgagttatctatttgtggtacaggtacacaaatgagaagatgaagaaggctcccat 64084
>ref|NM_126066.3| Arabidopsis thaliana DGL1; dolichyl-diphosphooligosaccharide-protein glycotransferase AT5G66680 (DGL1) mRNA, complete cds Length = 1696 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 454 gggctcatcatgaaaaactgaatctgaacatcatcggcaacatatggcttccagcttgtt 513 |||||||||||| ||||||||| ||| ||||| | |||||||| |||| |||||| || Sbjct: 1129 gggctcatcatgtaaaactgaacctgcacatcgttagcaacatacggctcccagctcttt 1070 Query: 514 ccagaccattcgtatatctcaactgagtattccaagtcatc 554 || ||||| || |||||||| || || |||||| |||||| Sbjct: 1069 cctgaccactcatatatctctacagaaaattccaggtcatc 1029 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 277 ctctcatactcgtcatgcctgtatggccgcactggaatctgctttgcaagaga 329 ||||||||||| | || ||||| |||||||| ||||||||||| | |||||| Sbjct: 1306 ctctcatactcattgtgtctgtaaggccgcaccggaatctgcttcgaaagaga 1254
>gb|AY150381.1| Arabidopsis thaliana putative dolichyl-di-phosphooligosaccharide glycotransferase (oligosaccharyltransferase) (At5g66680) mRNA, complete cds Length = 1345 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 454 gggctcatcatgaaaaactgaatctgaacatcatcggcaacatatggcttccagcttgtt 513 |||||||||||| ||||||||| ||| ||||| | |||||||| |||| |||||| || Sbjct: 1043 gggctcatcatgtaaaactgaacctgcacatcgttagcaacatacggctcccagctcttt 984 Query: 514 ccagaccattcgtatatctcaactgagtattccaagtcatc 554 || ||||| || |||||||| || || |||||| |||||| Sbjct: 983 cctgaccactcatatatctctacagaaaattccaggtcatc 943 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 277 ctctcatactcgtcatgcctgtatggccgcactggaatctgctttgcaagaga 329 ||||||||||| | || ||||| |||||||| ||||||||||| | |||||| Sbjct: 1220 ctctcatactcattgtgtctgtaaggccgcaccggaatctgcttcgaaagaga 1168
>gb|AF428338.1|AF428338 Arabidopsis thaliana AT5g66680/MSN2_7 mRNA, complete cds Length = 1544 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 454 gggctcatcatgaaaaactgaatctgaacatcatcggcaacatatggcttccagcttgtt 513 |||||||||||| ||||||||| ||| ||||| | |||||||| |||| |||||| || Sbjct: 1084 gggctcatcatgtaaaactgaacctgcacatcgttagcaacatacggctcccagctcttt 1025 Query: 514 ccagaccattcgtatatctcaactgagtattccaagtcatc 554 || ||||| || |||||||| || || |||||| |||||| Sbjct: 1024 cctgaccactcatatatctctacagaaaattccaggtcatc 984 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 277 ctctcatactcgtcatgcctgtatggccgcactggaatctgctttgcaagaga 329 ||||||||||| | || ||||| |||||||| ||||||||||| | |||||| Sbjct: 1261 ctctcatactcattgtgtctgtaaggccgcaccggaatctgcttcgaaagaga 1209
>emb|BX831000.1|CNS0A0SR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS47ZF06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1640 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 454 gggctcatcatgaaaaactgaatctgaacatcatcggcaacatatggcttccagcttgtt 513 |||||||||||| ||||||||| ||| ||||| | |||||||| |||| |||||| || Sbjct: 1071 gggctcatcatgtaaaactgaacctgcacatcgttagcaacatacggctcccagctcttt 1012 Query: 514 ccagaccattcgtatatctcaactgagtattccaagtcatc 554 || ||||| || |||||||| || || |||||| |||||| Sbjct: 1011 cctgaccactcatatatctctacagaaaattccaggtcatc 971 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 277 ctctcatactcgtcatgcctgtatggccgcactggaatctgctttgcaagaga 329 ||||||||||| | || ||||| |||||||| ||||||||||| | |||||| Sbjct: 1248 ctctcatactcattgtgtctgtaaggccgcaccggaatctgcttcgaaagaga 1196
>emb|BX831189.1|CNS09YSI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS67ZA03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1510 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 454 gggctcatcatgaaaaactgaatctgaacatcatcggcaacatatggcttccagcttgtt 513 |||||||||||| ||||||||| ||| ||||| | |||||||| |||| |||||| || Sbjct: 1083 gggctcatcatgtaaaactgaacctgcacatcgttagcaacatacggctcccagctcttt 1024 Query: 514 ccagaccattcgtatatctcaactgagtattccaagtcatc 554 || ||||| || |||||||| || || |||||| |||||| Sbjct: 1023 cctgaccactcatatatctctacagaaaattccaggtcatc 983 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 277 ctctcatactcgtcatgcctgtatggccgcactggaatctgctttgcaagaga 329 ||||||||||| | || ||||| |||||||| ||||||||||| | |||||| Sbjct: 1260 ctctcatactcattgtgtctgtaaggccgcaccggaatctgcttcgaaagaga 1208
>gb|AY085807.1| Arabidopsis thaliana clone 18419 mRNA, complete sequence Length = 1540 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 454 gggctcatcatgaaaaactgaatctgaacatcatcggcaacatatggcttccagcttgtt 513 |||||||||||| ||||||||| ||| ||||| | |||||||| |||| |||||| || Sbjct: 1082 gggctcatcatgtaaaactgaacctgcacatcgttagcaacatacggctcccagctcttt 1023 Query: 514 ccagaccattcgtatatctcaactgagtattccaagtcatc 554 || ||||| || |||||||| || || |||||| |||||| Sbjct: 1022 cctgaccactcatatatctctacagaaaattccaggtcatc 982 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 277 ctctcatactcgtcatgcctgtatggccgcactggaatctgctttgcaagaga 329 ||||||||||| | || ||||| |||||||| ||||||||||| | |||||| Sbjct: 1259 ctctcatactcattgtgtctgtaaggccgcaccggaatctgcttcgaaagaga 1207
>dbj|AB018119.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSN2 Length = 62927 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 454 gggctcatcatgaaaaactgaatctgaacatcatcggcaacatatggcttccagcttgtt 513 |||||||||||| ||||||||| ||| ||||| | |||||||| |||| |||||| || Sbjct: 23822 gggctcatcatgtaaaactgaacctgcacatcgttagcaacatacggctcccagctcttt 23881 Query: 514 ccagaccattcgtatatctc 533 || ||||| || |||||||| Sbjct: 23882 cctgaccactcatatatctc 23901
>ref|NM_213093.1| Danio rerio zgc:66068 (zgc:66068), mRNA Length = 1845 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 358 tcaactttgaactggaaaactccataaacatccggaa 394 |||||||||||||| ||||||||||| ||||| |||| Sbjct: 1194 tcaactttgaactgaaaaactccatatacatcaggaa 1158
>gb|AF238380.3| Homo sapiens chromosome X multiple clones map p11.23, complete sequence Length = 158698 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 578 catctgtctccccaaccttatggtg 602 ||||||||||||||||||||||||| Sbjct: 148920 catctgtctccccaaccttatggtg 148896
>gb|AY034944.1| Arabidopsis thaliana putative dolichyl-di-phosphooligosaccharide-protein glycotransferase (At5g66680) mRNA, complete cds Length = 1608 Score = 50.1 bits (25), Expect = 0.009 Identities = 82/101 (81%) Strand = Plus / Minus Query: 454 gggctcatcatgaaaaactgaatctgaacatcatcggcaacatatggcttccagcttgtt 513 |||||||||||| ||||||||| ||| ||| | | |||||||| |||| |||||| || Sbjct: 1129 gggctcatcatgtaaaactgaacctgcacaccgttagcaacatacggctcccagctcttt 1070 Query: 514 ccagaccattcgtatatctcaactgagtattccaagtcatc 554 || ||||| || |||||||| || || |||||| |||||| Sbjct: 1069 cctgaccactcatatatctctacagaaaattccaggtcatc 1029 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 277 ctctcatactcgtcatgcctgtatggccgcactggaatctgctttgcaagaga 329 ||||||||||| | || ||||| |||||||| ||||||||||| | |||||| Sbjct: 1306 ctctcatactcattgtgtctgtaaggccgcaccggaatctgcttcgaaagaga 1254
>gb|AF222686.1|AF222686 Homo sapiens chromosome X PAC K6166 map Xp11.23, complete sequence Length = 122181 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 578 catctgtctccccaaccttatggtg 602 ||||||||||||||||||||||||| Sbjct: 28682 catctgtctccccaaccttatggtg 28658
>gb|BC056559.1| Danio rerio zgc:66068, mRNA (cDNA clone MGC:66068 IMAGE:6795586), complete cds Length = 1850 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 358 tcaactttgaactggaaaactccataaacatccggaa 394 |||||||||||||| ||||||||||| ||||| |||| Sbjct: 1206 tcaactttgaactgaaaaactccatatacatcaggaa 1170
>gb|BC066475.1| Danio rerio zgc:66068, mRNA (cDNA clone MGC:77478 IMAGE:6524103), complete cds Length = 1845 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 358 tcaactttgaactggaaaactccataaacatccggaa 394 |||||||||||||| ||||||||||| ||||| |||| Sbjct: 1194 tcaactttgaactgaaaaactccatatacatcaggaa 1158
>emb|CT030660.14| Mouse DNA sequence from clone RP23-455F4 on chromosome 13, complete sequence Length = 174127 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 310 ggaatctgctttgcaagagaga 331 |||||||||||||||||||||| Sbjct: 140229 ggaatctgctttgcaagagaga 140250
>gb|AC154793.2| Mus musculus BAC clone RP23-88B6 from chromosome 13, complete sequence Length = 182356 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 310 ggaatctgctttgcaagagaga 331 |||||||||||||||||||||| Sbjct: 94623 ggaatctgctttgcaagagaga 94602
>gb|AC107704.8| Mus musculus chromosome 7, clone RP24-121L4, complete sequence Length = 194458 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 503 tccagcttgttccagaccatt 523 ||||||||||||||||||||| Sbjct: 77554 tccagcttgttccagaccatt 77574
>emb|CT010564.2| Xenopus tropicalis finished cDNA, clone TEgg091c22 Length = 1852 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 364 ttgaactggaaaactccataaacatccgg 392 ||||||||||| || |||||||||||||| Sbjct: 1240 ttgaactggaacacaccataaacatccgg 1212
>emb|AL512380.20| Human DNA sequence from clone RP11-204E9 on chromosome 6 Contains part of a novel gene, complete sequence Length = 150972 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 ttattacatcacaattctatc 146 ||||||||||||||||||||| Sbjct: 26211 ttattacatcacaattctatc 26231
>gb|AC018683.4|AC018683 Homo sapiens BAC clone RP11-423P14 from 4, complete sequence Length = 201907 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 ccagtgtatccaagcctttgg 354 ||||||||||||||||||||| Sbjct: 32511 ccagtgtatccaagcctttgg 32531
>emb|BX832898.1|CNS0A0F3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL20ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1468 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 277 ctctcatactcgtcatgcctgtatggccgcactggaatctgctttgcaagaga 329 ||||||||||| | || ||||| |||||||| ||||||||||| | |||||| Sbjct: 1242 ctctcatactcattgtgtctgtaaggccgcaccggaatctgcttcgaaagaga 1190
>gb|AC009080.8| Homo sapiens chromosome 16 clone RP11-341K23, complete sequence Length = 178099 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 aaaattagcaaaaatgttaacaaaa 39 ||||||||||||||||||| ||||| Sbjct: 53582 aaaattagcaaaaatgttaccaaaa 53606
>gb|AC084648.1|CBRG45M20 Caenorhabditis briggsae cosmid G45M20, complete sequence Length = 42715 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 421 gttttgtcggttgacatatttttca 445 |||||||| |||||||||||||||| Sbjct: 32186 gttttgtccgttgacatatttttca 32162
>gb|AC024810.1| Caenorhabditis elegans cosmid Y54E10A, complete sequence Length = 101640 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctgaaaattagcaaaaatgtt 32 ||||||||||||||||||||| Sbjct: 64664 ctgaaaattagcaaaaatgtt 64644
>emb|AL929182.4| Zebrafish DNA sequence from clone CH211-195E3 in linkage group 20, complete sequence Length = 225515 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 caaaaatgttaacaaaagttg 43 ||||||||||||||||||||| Sbjct: 138228 caaaaatgttaacaaaagttg 138208
>gb|AC119889.13| Mus musculus chromosome 1, clone RP24-220M12, complete sequence Length = 153713 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 216 gaagaaggctcccattgttgaaaa 239 |||||||||||||| ||||||||| Sbjct: 20839 gaagaaggctcccactgttgaaaa 20862
>gb|AC101672.11| Mus musculus chromosome 5, clone RP23-115F16, complete sequence Length = 204025 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 actgaaaattagcaaaaatgttaa 34 |||| ||||||||||||||||||| Sbjct: 159050 actgtaaattagcaaaaatgttaa 159027
>gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1008_D08, complete sequence Length = 94286 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 caaaaatgttaacaaaagtt 42 |||||||||||||||||||| Sbjct: 47601 caaaaatgttaacaaaagtt 47620
>gb|AC140196.3| Mus musculus BAC clone RP24-267C3 from chromosome 7, complete sequence Length = 183537 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 acaaaagttgggggcaggga 53 |||||||||||||||||||| Sbjct: 28916 acaaaagttgggggcaggga 28897
>gb|AC112682.12| Mus musculus chromosome 6, clone RP23-332K10, complete sequence Length = 206903 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 aaaattagcaaaaatgttaa 34 |||||||||||||||||||| Sbjct: 123126 aaaattagcaaaaatgttaa 123145
>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0016G07, complete sequence Length = 123167 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 caaaaatgttaacaaaagtt 42 |||||||||||||||||||| Sbjct: 114502 caaaaatgttaacaaaagtt 114521
>gb|U55857.1| Caenorhabditis elegans cosmid K08D10, complete sequence Length = 32640 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 aaaattagcaaaaatgttaa 34 |||||||||||||||||||| Sbjct: 24062 aaaattagcaaaaatgttaa 24081
>gb|AC093716.3| Homo sapiens BAC clone RP11-702L4 from 7, complete sequence Length = 77028 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 catgaaaaactgaatctgaa 481 |||||||||||||||||||| Sbjct: 69974 catgaaaaactgaatctgaa 69955
>emb|BX323064.13| Zebrafish DNA sequence from clone DKEYP-13D12 in linkage group 2, complete sequence Length = 170480 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ttagcaaaaatgttaacaaa 38 |||||||||||||||||||| Sbjct: 106513 ttagcaaaaatgttaacaaa 106532
>emb|BX890581.13| Zebrafish DNA sequence from clone CH211-222O19 in linkage group 21, complete sequence Length = 205143 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 aaaatgttaacaaaagttgg 44 |||||||||||||||||||| Sbjct: 38080 aaaatgttaacaaaagttgg 38061
>gb|AC087379.4| Homo sapiens chromosome 11, clone RP11-396O20, complete sequence Length = 167699 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 gtgcctgacattcactgcct 619 |||||||||||||||||||| Sbjct: 106199 gtgcctgacattcactgcct 106180
>emb|BX548038.9| Zebrafish DNA sequence from clone DKEY-219C10 in linkage group 9, complete sequence Length = 173526 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 aaaatgttaacaaaagttgg 44 |||||||||||||||||||| Sbjct: 143129 aaaatgttaacaaaagttgg 143110
>emb|BX510939.5| Zebrafish DNA sequence from clone CH211-78C9 in linkage group 16, complete sequence Length = 163843 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aaaaatgttaacaaaagttg 43 |||||||||||||||||||| Sbjct: 141525 aaaaatgttaacaaaagttg 141544
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 caaaaatgttaacaaaagtt 42 |||||||||||||||||||| Sbjct: 6743340 caaaaatgttaacaaaagtt 6743359
>gb|AC131599.2| Lemur catta, clone -206F2, complete sequence Length = 155606 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aaaaatgttaacaaaagttg 43 |||||||||||||||||||| Sbjct: 148777 aaaaatgttaacaaaagttg 148796
>gb|AC116868.9| Mus musculus chromosome 1, clone RP24-414I2, complete sequence Length = 161154 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 216 gaagaaggctcccattgttgaaaa 239 |||||||||||||| ||||||||| Sbjct: 139134 gaagaaggctcccactgttgaaaa 139157
>emb|AL929193.19| Zebrafish DNA sequence from clone CH211-274P24 in linkage group 20, complete sequence Length = 159094 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 aaaatgttaacaaaagttgg 44 |||||||||||||||||||| Sbjct: 149199 aaaatgttaacaaaagttgg 149218
>gb|AC150898.2| Mus musculus BAC clone RP23-196E12 from 19, complete sequence Length = 231474 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gttgggggcagggaacccca 59 |||||||||||||||||||| Sbjct: 150295 gttgggggcagggaacccca 150276
>emb|BX004884.10| Zebrafish DNA sequence from clone DKEY-6N6 in linkage group 8, complete sequence Length = 225442 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aaaaatgttaacaaaagttg 43 |||||||||||||||||||| Sbjct: 220292 aaaaatgttaacaaaagttg 220273
>gb|AC108818.11| Mus musculus chromosome 7, clone RP23-474B17, complete sequence Length = 180498 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 acaaaagttgggggcaggga 53 |||||||||||||||||||| Sbjct: 76631 acaaaagttgggggcaggga 76650
>gb|AC165089.5| Mus musculus BAC clone RP23-85H2 from chromosome 19, complete sequence Length = 247216 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gttgggggcagggaacccca 59 |||||||||||||||||||| Sbjct: 209975 gttgggggcagggaacccca 209994 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,758,620 Number of Sequences: 3902068 Number of extensions: 5758620 Number of successful extensions: 105602 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 105450 Number of HSP's gapped (non-prelim): 148 length of query: 619 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 596 effective length of database: 17,143,297,704 effective search space: 10217405431584 effective search space used: 10217405431584 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)