ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags7j05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK063398.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-H11, full insert sequence Length = 1730 Score = 246 bits (124), Expect = 7e-62 Identities = 253/296 (85%) Strand = Plus / Minus Query: 301 cttgttctccggagttgatacttgggttctgggggaggcgcagaggttatcatcatctcc 360 ||||||| || |||||||||||||||||| ||||||||||| ||| | | ||| ||| Sbjct: 1398 cttgttcgcctgagttgatacttgggttccgggggaggcgcggagttcagtatctcatcc 1339 Query: 361 aactccttctgcttcttcaacctctcgttctcctcttctagacgagacaccttgttttcg 420 ||||||||||||||||| | |||||| |||||||||||||||||| || |||||||| Sbjct: 1338 aactccttctgcttctttagcctctcattctcctcttctagacgaagaactttgttttca 1279 Query: 421 agctcattagtgtaagcctgcttcctcgctctggaccttgcagctgattccctgtttttt 480 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 1278 agctcattagtgtaagcctgcttcctcgctcttgacctggcagctgattccctgtttttt 1219 Query: 481 atcattcttttttgccttctttctacgaccttatcaggtataccatctgaggcaccacgc 540 ||||| || || |||||||||||||| | |||||| | || | ||| ||||| || Sbjct: 1218 atcatcctcttctgccttctttctactagcttatctgcaatctcccctgtggcacagcgt 1159 Query: 541 ttgcgcccaggtgtctgaggatcagaatgtgcatcgagcattggtgaagtaatctg 596 ||||||||||||||||||||||||||| | || |||||||||| ||||| ||||| Sbjct: 1158 ttgcgcccaggtgtctgaggatcagaaagagccccgagcattggcgaagtgatctg 1103 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 taatctacaaaatttactat 279 |||||||||||||||||||| Sbjct: 1448 taatctacaaaatttactat 1429
>gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1119_H02, complete sequence Length = 138584 Score = 127 bits (64), Expect = 4e-26 Identities = 136/160 (85%) Strand = Plus / Minus Query: 437 cctgcttcctcgctctggaccttgcagctgattccctgttttttatcattcttttttgcc 496 |||||||||||||||| ||||| |||||||||||||||||||||||||| || || |||| Sbjct: 122743 cctgcttcctcgctcttgacctggcagctgattccctgttttttatcatcctcttctgcc 122684 Query: 497 ttctttctacgaccttatcaggtataccatctgaggcaccacgcttgcgcccaggtgtct 556 |||||||||| | |||||| | || | ||| ||||| || |||||||||||||||| Sbjct: 122683 ttctttctactagcttatctgcaatctcccctgtggcacagcgtttgcgcccaggtgtct 122624 Query: 557 gaggatcagaatgtgcatcgagcattggtgaagtaatctg 596 ||||||||||| | || |||||||||| ||||| ||||| Sbjct: 122623 gaggatcagaaagagccccgagcattggcgaagtgatctg 122584 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 365 ccttctgcttcttcaacctctcgttctcctcttctagacgagacaccttgttttcgagct 424 ||||||||||||| | |||||| |||||||||||||||||| || |||||||| |||| Sbjct: 123113 ccttctgcttctttagcctctcattctcctcttctagacgaagaactttgttttcaagct 123054 Query: 425 cattagtgtaagcctgc 441 ||||||||||||||||| Sbjct: 123053 cattagtgtaagcctgc 123037 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 301 cttgttctccggagttgatacttgggttctgggggaggcgc 341 ||||||| || |||||||||||||||||| ||||||||||| Sbjct: 124251 cttgttcgcctgagttgatacttgggttccgggggaggcgc 124211 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 taatctacaaaatttactat 279 |||||||||||||||||||| Sbjct: 124301 taatctacaaaatttactat 124282
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 127 bits (64), Expect = 4e-26 Identities = 136/160 (85%) Strand = Plus / Minus Query: 437 cctgcttcctcgctctggaccttgcagctgattccctgttttttatcattcttttttgcc 496 |||||||||||||||| ||||| |||||||||||||||||||||||||| || || |||| Sbjct: 23918908 cctgcttcctcgctcttgacctggcagctgattccctgttttttatcatcctcttctgcc 23918849 Query: 497 ttctttctacgaccttatcaggtataccatctgaggcaccacgcttgcgcccaggtgtct 556 |||||||||| | |||||| | || | ||| ||||| || |||||||||||||||| Sbjct: 23918848 ttctttctactagcttatctgcaatctcccctgtggcacagcgtttgcgcccaggtgtct 23918789 Query: 557 gaggatcagaatgtgcatcgagcattggtgaagtaatctg 596 ||||||||||| | || |||||||||| ||||| ||||| Sbjct: 23918788 gaggatcagaaagagccccgagcattggcgaagtgatctg 23918749 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 365 ccttctgcttcttcaacctctcgttctcctcttctagacgagacaccttgttttcgagct 424 ||||||||||||| | |||||| |||||||||||||||||| || |||||||| |||| Sbjct: 23919278 ccttctgcttctttagcctctcattctcctcttctagacgaagaactttgttttcaagct 23919219 Query: 425 cattagtgtaagcctgc 441 ||||||||||||||||| Sbjct: 23919218 cattagtgtaagcctgc 23919202 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 301 cttgttctccggagttgatacttgggttctgggggaggcgc 341 ||||||| || |||||||||||||||||| ||||||||||| Sbjct: 23920416 cttgttcgcctgagttgatacttgggttccgggggaggcgc 23920376 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 taatctacaaaatttactat 279 |||||||||||||||||||| Sbjct: 23920466 taatctacaaaatttactat 23920447
>ref|NM_191061.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 933 Score = 101 bits (51), Expect = 3e-18 Identities = 117/139 (84%) Strand = Plus / Minus Query: 362 actccttctgcttcttcaacctctcgttctcctcttctagacgagacaccttgttttcga 421 ||||||| ||| |||| | |||| | ||||||||||||| |||||| ||||||||||| | Sbjct: 931 actccttttgcctctttagcctcacattctcctcttctaaacgagaaaccttgttttcaa 872 Query: 422 gctcattagtgtaagcctgcttcctcgctctggaccttgcagctgattccctgtttttta 481 | ||||||||||| ||||||||||| ||||| || | |||||||| |||||||| || | Sbjct: 871 gttcattagtgtaggcctgcttcctggctcttgaacgggcagctgactccctgttcttga 812 Query: 482 tcattcttttttgccttct 500 |||| || || |||||||| Sbjct: 811 tcatcctcttctgccttct 793
>ref|NM_179446.2| Arabidopsis thaliana ABF2 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 2) AT1G45249 (ABF2) transcript variant AT1G45249.1 mRNA, complete cds Length = 1662 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 430 gtgtaagcctgcttcctcgctctggaccttgcagctgattccctgttttttatcattctt 489 ||||||||||| ||||| || | |||||||||||||||||| | ||| ||||||||||| Sbjct: 1201 gtgtaagcctgtttcctggcccgggaccttgcagctgattctcggttctttatcattctc 1142 Query: 490 ttttgccttctttctac 506 |||||||||| ||||| Sbjct: 1141 ctttgccttctctctac 1125
>gb|AF093545.1|AF093545 Arabidopsis thaliana clone 2 abscisic acid responsive elements-binding factor (ABRE) mRNA, complete cds Length = 1654 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 430 gtgtaagcctgcttcctcgctctggaccttgcagctgattccctgttttttatcattctt 489 ||||||||||| ||||| || | |||||||||||||||||| | ||| ||||||||||| Sbjct: 1187 gtgtaagcctgtttcctggcccgggaccttgcagctgattctcggttctttatcattctc 1128 Query: 490 ttttgccttctttctac 506 |||||||||| ||||| Sbjct: 1127 ctttgccttctctctac 1111
>dbj|AB017160.1| Arabidopsis thaliana mRNA for ABA-responsive element binding protein 1 (AREB1), complete cds Length = 1541 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 430 gtgtaagcctgcttcctcgctctggaccttgcagctgattccctgttttttatcattctt 489 ||||||||||| ||||| || | |||||||||||||||||| | ||| ||||||||||| Sbjct: 1185 gtgtaagcctgtttcctggcccgggaccttgcagctgattctcggttctttatcattctc 1126 Query: 490 ttttgccttctttctac 506 |||||||||| ||||| Sbjct: 1125 ctttgccttctctctac 1109
>dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432B10 Length = 131918 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 388 ttctcctcttctagacgagacaccttgttttcgagctcattagtgtaagcctg 440 ||||||||||||| |||||| ||||||||||| || ||||||||||| ||||| Sbjct: 57767 ttctcctcttctaaacgagaaaccttgttttcaagttcattagtgtaggcctg 57819 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 301 cttgttctccggagttgatacttgggttctgg 332 |||||||||| ||||||||||||||||||||| Sbjct: 56295 cttgttctcctgagttgatacttgggttctgg 56326
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 388 ttctcctcttctagacgagacaccttgttttcgagctcattagtgtaagcctg 440 ||||||||||||| |||||| ||||||||||| || ||||||||||| ||||| Sbjct: 34560473 ttctcctcttctaaacgagaaaccttgttttcaagttcattagtgtaggcctg 34560525 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 301 cttgttctccggagttgatacttgggttctgg 332 |||||||||| ||||||||||||||||||||| Sbjct: 34559001 cttgttctcctgagttgatacttgggttctgg 34559032
>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0085D07 Length = 172483 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 388 ttctcctcttctagacgagacaccttgttttcgagctcattagtgtaagcctg 440 ||||||||||||| |||||| ||||||||||| || ||||||||||| ||||| Sbjct: 12490 ttctcctcttctaaacgagaaaccttgttttcaagttcattagtgtaggcctg 12542 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 301 cttgttctccggagttgatacttgggttctgg 332 |||||||||| ||||||||||||||||||||| Sbjct: 11018 cttgttctcctgagttgatacttgggttctgg 11049
>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0425G02 Length = 155432 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 388 ttctcctcttctagacgagacaccttgttttcgagctcattagtgtaagcctg 440 ||||||||||||| |||||| ||||||||||| || ||||||||||| ||||| Sbjct: 136192 ttctcctcttctaaacgagaaaccttgttttcaagttcattagtgtaggcctg 136244 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 301 cttgttctccggagttgatacttgggttctgg 332 |||||||||| ||||||||||||||||||||| Sbjct: 134720 cttgttctcctgagttgatacttgggttctgg 134751
>ref|NM_179159.2| Arabidopsis thaliana ABF3 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3); DNA binding / transcription factor/ transcriptional activator AT4G34000 (ABF3) transcript variant AT4G34000.1 mRNA, complete cds Length = 1425 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 457 cttgcagctgattccctgttttttatcattcttttttgccttct 500 ||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 1238 cttgcagctgattccctattctttatcatccttttttgccttct 1195
>ref|NM_119562.3| Arabidopsis thaliana ABF3 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3); DNA binding / transcription factor/ transcriptional activator AT4G34000 (ABF3) transcript variant AT4G34000.2 mRNA, complete cds Length = 1724 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 457 cttgcagctgattccctgttttttatcattcttttttgccttct 500 ||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 1238 cttgcagctgattccctattctttatcatccttttttgccttct 1195
>ref|NM_001036709.1| Arabidopsis thaliana ABF3 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3); DNA binding / transcription factor/ transcriptional activator AT4G34000 (ABF3) transcript variant AT4G34000.4 mRNA, complete cds Length = 2086 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 457 cttgcagctgattccctgttttttatcattcttttttgccttct 500 ||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 1250 cttgcagctgattccctattctttatcatccttttttgccttct 1207
>ref|NM_001036708.1| Arabidopsis thaliana ABF3 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3); DNA binding / transcription factor/ transcriptional activator AT4G34000 (ABF3) transcript variant AT4G34000.3 mRNA, complete cds Length = 1700 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 457 cttgcagctgattccctgttttttatcattcttttttgccttct 500 ||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 1250 cttgcagctgattccctattctttatcatccttttttgccttct 1207
>emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 80 Length = 192861 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 457 cttgcagctgattccctgttttttatcattcttttttgccttct 500 ||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 130879 cttgcagctgattccctattctttatcatccttttttgccttct 130836
>emb|AL031032.1|ATF17I5 Arabidopsis thaliana DNA chromosome 4, BAC clone F17I5 (ESSA project) Length = 86748 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 457 cttgcagctgattccctgttttttatcattcttttttgccttct 500 ||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 81855 cttgcagctgattccctattctttatcatccttttttgccttct 81812
>emb|AL021961.2|ATF28A23 Arabidopsis thaliana DNA chromosome 4, BAC clone F28A23 (ESSA project) Length = 94091 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 457 cttgcagctgattccctgttttttatcattcttttttgccttct 500 ||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 831 cttgcagctgattccctattctttatcatccttttttgccttct 788
>gb|AY081467.1| Arabidopsis thaliana unknown protein (F17I5.190:F17I5.200) mRNA, complete cds Length = 1398 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 457 cttgcagctgattccctgttttttatcattcttttttgccttct 500 ||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 1163 cttgcagctgattccctattctttatcatccttttttgccttct 1120
>gb|AY054605.1| Arabidopsis thaliana Unknown protein (F17I5.190:F17I5.200) mRNA, complete cds Length = 1697 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 457 cttgcagctgattccctgttttttatcattcttttttgccttct 500 ||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 1236 cttgcagctgattccctattctttatcatccttttttgccttct 1193
>gb|AF334210.1|AF334210 Arabidopsis thaliana bZIP protein DPBF5 mRNA, complete cds Length = 1350 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 457 cttgcagctgattccctgttttttatcattcttttttgccttct 500 ||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 1163 cttgcagctgattccctattctttatcatccttttttgccttct 1120
>emb|BX842336.1|CNS0A37Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZG02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1606 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 457 cttgcagctgattccctgttttttatcattcttttttgccttct 500 ||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 1211 cttgcagctgattccctattctttatcatccttttttgccttct 1168
>emb|BX842320.1|CNS0A2RO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS40ZD08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 607 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 457 cttgcagctgattccctgttttttatcattcttttttgccttct 500 ||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 145 cttgcagctgattccctattctttatcatccttttttgccttct 102
>dbj|AK175851.1| Arabidopsis thaliana mRNA for abscisic acid responsive elements-binding factor (ABRE/ABF3), complete cds, clone: RAFL22-47-B14 Length = 1724 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 457 cttgcagctgattccctgttttttatcattcttttttgccttct 500 ||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 1251 cttgcagctgattccctattctttatcatccttttttgccttct 1208
>gb|AF093546.1|AF093546 Arabidopsis thaliana clone 11 abscisic acid responsive elements-binding factor (ABRE) mRNA, complete cds Length = 1667 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 457 cttgcagctgattccctgttttttatcattcttttttgccttct 500 ||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 1200 cttgcagctgattccctattctttatcatccttttttgccttct 1157
>ref|NM_202252.2| Arabidopsis thaliana ABF2 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 2); transcription factor AT1G45249 (ABF2) transcript variant AT1G45249.2 mRNA, complete cds Length = 1400 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 453 ggaccttgcagctgattccctgttttttatcattcttttttgccttctttctac 506 |||||||||||||||||| | ||| ||||||||||| |||||||||| ||||| Sbjct: 1178 ggaccttgcagctgattctcggttctttatcattctcctttgccttctctctac 1125
>gb|AY786307.1| Malus x domestica bZIP transcription factor (ZIP1) mRNA, complete cds Length = 1164 Score = 58.0 bits (29), Expect = 3e-05 Identities = 89/109 (81%) Strand = Plus / Minus Query: 391 tcctcttctagacgagacaccttgttttcgagctcattagtgtaagcctgcttcctcgct 450 ||||| || ||||| || || ||||| || || ||||| || || ||||||||||| ||| Sbjct: 902 tcctcctccagacgtgaaactttgttctccagttcatttgtatatgcctgcttccttgct 843 Query: 451 ctggaccttgcagctgattccctgttttttatcattcttttttgccttc 499 | || | |||||| ||||||| ||| ||||||||||| |||||||||| Sbjct: 842 cgcgaacgtgcagcagattcccggttctttatcattctcttttgccttc 794
>ref|NM_115544.2| Arabidopsis thaliana AREB3 (ABA-RESPONSIVE ELEMENT BINDING PROTEIN 3); DNA binding / transcription factor/ transcriptional activator AT3G56850 (AREB3) mRNA, complete cds Length = 1729 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 421 agctcattagtgtaagcctgcttcctcgctctggaccttgcagctgattccctgtttttt 480 ||||||| |||||||||||| ||||| |||| ||| | ||||| || || ||||| ||| Sbjct: 1380 agctcatgagtgtaagcctgtttcctagctcgggaacgagcagcagactctctgttcttt 1321 Query: 481 atcattcttttttgccttctttctac 506 |||||||| || ||||| || ||||| Sbjct: 1320 atcattctcttctgcctcctctctac 1295
>ref|XM_370021.1| Magnaporthe grisea 70-15 hypothetical protein (MG06536.4) partial mRNA Length = 2145 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 363 ctccttctgcttcttcaacctctcgttctcctct 396 |||||||| ||||||||||||||| ||||||||| Sbjct: 1074 ctccttctccttcttcaacctctccttctcctct 1041
>gb|AY081670.1| Arabidopsis thaliana promoter-binding factor-like protein (At3g56850) mRNA, complete cds Length = 943 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 421 agctcattagtgtaagcctgcttcctcgctctggaccttgcagctgattccctgtttttt 480 ||||||| |||||||||||| ||||| |||| ||| | ||||| || || ||||| ||| Sbjct: 758 agctcatgagtgtaagcctgtttcctagctcgggaacgagcagcagactctctgttcttt 699 Query: 481 atcattcttttttgccttctttctac 506 |||||||| || ||||| || ||||| Sbjct: 698 atcattctcttctgcctcctctctac 673
>gb|AY062448.1| Arabidopsis thaliana promoter-binding factor-like protein (At3g56850; T8M16_180) mRNA, complete cds Length = 1672 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 421 agctcattagtgtaagcctgcttcctcgctctggaccttgcagctgattccctgtttttt 480 ||||||| |||||||||||| ||||| |||| ||| | ||||| || || ||||| ||| Sbjct: 1323 agctcatgagtgtaagcctgtttcctagctcgggaacgagcagcagactctctgttcttt 1264 Query: 481 atcattcttttttgccttctttctac 506 |||||||| || ||||| || ||||| Sbjct: 1263 atcattctcttctgcctcctctctac 1238
>gb|AF334208.1|AF334208 Arabidopsis thaliana bZIP protein DPBF3 mRNA, complete cds Length = 894 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 421 agctcattagtgtaagcctgcttcctcgctctggaccttgcagctgattccctgtttttt 480 ||||||| |||||||||||| ||||| |||| ||| | ||||| || || ||||| ||| Sbjct: 758 agctcatgagtgtaagcctgtttcctagctcgggaacgagcagcagactctctgttcttt 699 Query: 481 atcattcttttttgccttctttctac 506 |||||||| || ||||| || ||||| Sbjct: 698 atcattctcttctgcctcctctctac 673
>emb|BX823913.1|CNS0A6N1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS91ZH05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1715 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 421 agctcattagtgtaagcctgcttcctcgctctggaccttgcagctgattccctgtttttt 480 ||||||| |||||||||||| ||||| |||| ||| | ||||| || || ||||| ||| Sbjct: 1365 agctcatgagtgtaagcctgtttcctagctcgggaacgagcagcagactctctgttcttt 1306 Query: 481 atcattcttttttgccttctttctac 506 |||||||| || ||||| || ||||| Sbjct: 1305 atcattctcttctgcctcctctctac 1280
>emb|BX823715.1|CNS0A6KH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZB06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1603 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 421 agctcattagtgtaagcctgcttcctcgctctggaccttgcagctgattccctgtttttt 480 ||||||| |||||||||||| ||||| |||| ||| | ||||| || || ||||| ||| Sbjct: 1272 agctcatgagtgtaagcctgtttcctagctcgggaacgagcagcagactctctgttcttt 1213 Query: 481 atcattcttttttgccttctttctac 506 |||||||| || ||||| || ||||| Sbjct: 1212 atcattctcttctgcctcctctctac 1187
>dbj|AB017162.1| Arabidopsis thaliana mRNA for ABA-responsive element binding protein 3 (AREB3), complete cds Length = 1635 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 421 agctcattagtgtaagcctgcttcctcgctctggaccttgcagctgattccctgtttttt 480 ||||||| |||||||||||| ||||| |||| ||| | ||||| || || ||||| ||| Sbjct: 1317 agctcatgagtgtaagcctgtttcctagctcgggaacgagcagcagactctctgttcttt 1258 Query: 481 atcattcttttttgccttctttctac 506 |||||||| || ||||| || ||||| Sbjct: 1257 atcattctcttctgcctcctctctac 1232
>emb|BX842338.1|CNS0A3AL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB27ZC04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1681 Score = 50.1 bits (25), Expect = 0.008 Identities = 41/45 (91%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 457 cttgcagctgattccctgttttttatcattcttttt-tgccttct 500 ||||||||||||||||| || |||||||| |||||| |||||||| Sbjct: 1202 cttgcagctgattccctattctttatcatcctttttgtgccttct 1158
>gb|AF329450.1| Catharanthus roseus transcription factor BZIP1 (bzip1) mRNA, complete cds Length = 1665 Score = 48.1 bits (24), Expect = 0.033 Identities = 51/60 (85%) Strand = Plus / Minus Query: 429 agtgtaagcctgcttcctcgctctggaccttgcagctgattccctgttttttatcattct 488 |||||| ||||||||||| |||| || | |||||| ||||| |||||||| |||||||| Sbjct: 1228 agtgtaggcctgcttcctggctcgtgatcgtgcagcagattctctgtttttaatcattct 1169
>gb|AY789639.1| Capsicum annuum bZIP protein mRNA, complete cds Length = 868 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 463 gctgattccctgttttttatcattcttttt 492 ||||||||||||||| ||||||||||||| Sbjct: 362 gctgattccctgtttgatatcattcttttt 333
>gb|AE006650.1| Sulfolobus solfataricus P2 section 9 of 272 of the complete genome Length = 11720 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 476 tttttatcattcttttttgcct 497 |||||||||||||||||||||| Sbjct: 5331 tttttatcattcttttttgcct 5310
>gb|AC146910.16| Medicago truncatula clone mth2-59i21, complete sequence Length = 109724 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 460 gcagctgattccctgttttttatcattcttttttgcct 497 ||||| |||||||| ||||||||||| || |||||||| Sbjct: 72811 gcagcagattccctattttttatcatcctcttttgcct 72774
>emb|Y08257.1|SS56KBFR S.solfataricus 56 kbp DNA fragment Length = 56105 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 476 tttttatcattcttttttgcct 497 |||||||||||||||||||||| Sbjct: 11185 tttttatcattcttttttgcct 11206
>gb|AC157544.7| Mus musculus chromosome 8, clone RP23-271P20, complete sequence Length = 159843 Score = 44.1 bits (22), Expect = 0.52 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 366 cttctgcttcttcaacctc-tcgttctcctcttc 398 ||||||||||||||||||| || ||||||||||| Sbjct: 66535 cttctgcttcttcaacctcttccttctcctcttc 66502
>gb|AF430372.1| Capsicum chinense bZIP transcription factor (PPI1) mRNA, complete cds Length = 1216 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 463 gctgattccctgttttttatcattcttttt 492 ||||||||||||||| ||||||||||||| Sbjct: 692 gctgattccctgtttgatatcattcttttt 663
>gb|AF127797.1|AF127797 Capsicum chinense putative bZIP DNA-binding protein mRNA, complete cds Length = 1211 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 463 gctgattccctgttttttatcattcttttt 492 ||||||||||||||| ||||||||||||| Sbjct: 711 gctgattccctgtttgatatcattcttttt 682
>gb|BC106514.1| Xenopus laevis cDNA clone IMAGE:7393825, partial cds Length = 1142 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 484 attcttttttgccttctttct 504 ||||||||||||||||||||| Sbjct: 478 attcttttttgccttctttct 458
>gb|AY731647.1| Arachis hypogaea clone PM505 microsatellite sequence Length = 300 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 ttcttcaacctctcgttctcc 393 ||||||||||||||||||||| Sbjct: 279 ttcttcaacctctcgttctcc 299
>gb|AC115865.9| Mus musculus chromosome 3, clone RP24-314I8, complete sequence Length = 200362 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 349 atcatcatctccaactccttctgcttctt 377 ||||||| ||| ||||||||||||||||| Sbjct: 161182 atcatcagctcgaactccttctgcttctt 161210
>gb|AC145900.3| Pan troglodytes BAC clone RP43-40I9 from 7, complete sequence Length = 160229 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 473 tgttttttatcattctttttt 493 ||||||||||||||||||||| Sbjct: 15565 tgttttttatcattctttttt 15545
>gb|AY530758.1| Lycopersicon esculentum AREB-like protein mRNA, complete cds Length = 1344 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 460 gcagctgattccctgttttttatcattcttttttgccttctttctacgacctt 512 |||||||| || || |||||||||||||| | ||||| ||||| |||||||| Sbjct: 1145 gcagctgactctctattttttatcattctcctctgcctcctttcaacgacctt 1093
>ref|XM_987479.1| PREDICTED: Mus musculus guanylate nucleotide binding protein 2 (Gbp2), mRNA Length = 2311 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 349 atcatcatctccaactccttctgcttctt 377 ||||||| ||| ||||||||||||||||| Sbjct: 1570 atcatcagctcgaactccttctgcttctt 1542
>gb|BC049141.1| Mus musculus guanylate nucleotide binding protein 2, mRNA (cDNA clone IMAGE:3992217), containing frame-shift errors Length = 2493 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 349 atcatcatctccaactccttctgcttctt 377 ||||||| ||| ||||||||||||||||| Sbjct: 1691 atcatcagctcgaactccttctgcttctt 1663
>emb|CT010249.1| Mus musculus full open reading frame cDNA clone RZPDo836D0851D for gene Gbp2, Guanylate nucleotide binding protein 2; complete cds, incl. stopcodon Length = 1770 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 349 atcatcatctccaactccttctgcttctt 377 ||||||| ||| ||||||||||||||||| Sbjct: 1544 atcatcagctcgaactccttctgcttctt 1516
>gb|BC032882.1| Mus musculus guanylate nucleotide binding protein 2, mRNA (cDNA clone MGC:41173 IMAGE:1230883), complete cds Length = 2500 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 349 atcatcatctccaactccttctgcttctt 377 ||||||| ||| ||||||||||||||||| Sbjct: 1729 atcatcagctcgaactccttctgcttctt 1701
>gb|BC011336.1| Mus musculus guanylate nucleotide binding protein 2, mRNA (cDNA clone MGC:18544 IMAGE:3494311), complete cds Length = 2490 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 349 atcatcatctccaactccttctgcttctt 377 ||||||| ||| ||||||||||||||||| Sbjct: 1703 atcatcagctcgaactccttctgcttctt 1675
>emb|Z86064.2|HS435D1 Human DNA sequence from clone RP3-435D1 on chromosome Xq25 Contains the 3' end of the HS6ST2 gene for heparan sulfate 6-O-sulfotransferase 2, a novel gene and the 3' end of a novel gene, complete sequence Length = 184975 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 gcagtgtaatctacaaaattt 274 ||||||||||||||||||||| Sbjct: 44698 gcagtgtaatctacaaaattt 44678
>emb|AJ007970.1|MMU7970 Mus musculus mRNA for mGBP-2 protein Length = 2464 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 349 atcatcatctccaactccttctgcttctt 377 ||||||| ||| ||||||||||||||||| Sbjct: 1707 atcatcagctcgaactccttctgcttctt 1679
>gb|AC117472.3| Homo sapiens 3 BAC RP11-567P17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 119730 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 472 ctgttttttatcattcttttt 492 ||||||||||||||||||||| Sbjct: 61668 ctgttttttatcattcttttt 61648
>gb|AF109168.1| Mus musculus guanylate binding protein 2 (Gbp2) mRNA, complete cds Length = 2421 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 349 atcatcatctccaactccttctgcttctt 377 ||||||| ||| ||||||||||||||||| Sbjct: 1667 atcatcagctcgaactccttctgcttctt 1639
>dbj|AK150146.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530137D16 product:guanylate nucleotide binding protein 2, full insert sequence Length = 1131 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 349 atcatcatctccaactccttctgcttctt 377 ||||||| ||| ||||||||||||||||| Sbjct: 1016 atcatcagctcgaactccttctgcttctt 988
>ref|XM_395889.2| PREDICTED: Apis mellifera similar to ENSANGP00000026313 (LOC412432), partial mRNA Length = 1504 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 462 agctgattccctgttttttatcattcttt 490 ||||||||| || |||||||||||||||| Sbjct: 393 agctgattctctattttttatcattcttt 365
>gb|AC005046.3|AC005046 Homo sapiens BAC clone CTB-13F3 from 7q22, complete sequence Length = 219436 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 473 tgttttttatcattctttttt 493 ||||||||||||||||||||| Sbjct: 120356 tgttttttatcattctttttt 120336
>gb|AF077007.1|AF077007 Mus musculus interferon-induced guanylate binding protein GBP-2 (Gbp2) mRNA, complete cds Length = 2471 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 349 atcatcatctccaactccttctgcttctt 377 ||||||| ||| ||||||||||||||||| Sbjct: 1714 atcatcagctcgaactccttctgcttctt 1686
>ref|NM_010260.1| Mus musculus guanylate nucleotide binding protein 2 (Gbp2), mRNA Length = 2471 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 349 atcatcatctccaactccttctgcttctt 377 ||||||| ||| ||||||||||||||||| Sbjct: 1714 atcatcagctcgaactccttctgcttctt 1686
>gb|AC102108.12| Mus musculus chromosome 3, clone RP23-100J23, complete sequence Length = 216506 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 349 atcatcatctccaactccttctgcttctt 377 ||||||| ||| ||||||||||||||||| Sbjct: 23985 atcatcagctcgaactccttctgcttctt 24013
>ref|NM_118549.1| Arabidopsis thaliana ATP binding / microtubule motor AT4G24170 mRNA, complete cds Length = 3015 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 cttctgcttcttcaacctct 385 |||||||||||||||||||| Sbjct: 1085 cttctgcttcttcaacctct 1104
>ref|XM_658606.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6094.2), mRNA Length = 852 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 tatcgacctcaaacgggtgcagaa 300 |||||| ||||||||||||||||| Sbjct: 205 tatcgatctcaaacgggtgcagaa 182
>gb|AC102622.7| Mus musculus chromosome 3, clone RP23-434O10, complete sequence Length = 237899 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 ttcttttttgccttctttct 504 |||||||||||||||||||| Sbjct: 135838 ttcttttttgccttctttct 135857
>gb|AC137905.8| Mus musculus chromosome 15, clone RP23-334B11, complete sequence Length = 210548 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tctccaactccttctgcttc 375 |||||||||||||||||||| Sbjct: 170004 tctccaactccttctgcttc 169985
>ref|XM_720623.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05280) partial mRNA Length = 2358 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 tgttttttatcattcttttt 492 |||||||||||||||||||| Sbjct: 977 tgttttttatcattcttttt 958
>ref|XM_664041.1| Plasmodium berghei strain ANKA hypothetical protein (PB000948.01.0) partial mRNA Length = 378 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 tgttttttatcattcttttt 492 |||||||||||||||||||| Sbjct: 107 tgttttttatcattcttttt 88
>gb|AC140549.12| Medicago truncatula clone mth2-28o14, complete sequence Length = 139778 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 tgttttttatcattcttttt 492 |||||||||||||||||||| Sbjct: 70072 tgttttttatcattcttttt 70091
>emb|AL137061.12| Human DNA sequence from clone RP11-477B16 on chromosome 13 Contains the SOX21 gene for SRY (sex determining region Y)-box 21, a bromodomain containing 7 (BP75, NAG4, CELTIX1) (BRD7) pseudogene, a ribosomal protein L21 (RPL21) pseudogene and 2 CpG islands, complete sequence Length = 180538 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 ttttttatcattcttttttg 494 |||||||||||||||||||| Sbjct: 48230 ttttttatcattcttttttg 48249
>emb|AL109619.1|ATT19F6 Arabidopsis thaliana DNA chromosome 4, BAC clone T19F6, partial sequence (ESSA project) Length = 77567 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 cttctgcttcttcaacctct 385 |||||||||||||||||||| Sbjct: 69288 cttctgcttcttcaacctct 69307
>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61 Length = 198402 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 cttctgcttcttcaacctct 385 |||||||||||||||||||| Sbjct: 12583 cttctgcttcttcaacctct 12602
>emb|CR848002.10| Zebrafish DNA sequence from clone CH211-133L14 in linkage group 17, complete sequence Length = 57807 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 agcagtgtaatctacaaaat 272 |||||||||||||||||||| Sbjct: 21072 agcagtgtaatctacaaaat 21053
>emb|BX572644.6| Mouse DNA sequence from clone RP24-33B9 on chromosome 11, complete sequence Length = 30606 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 ctccttctgcttcttcaacc 382 |||||||||||||||||||| Sbjct: 20678 ctccttctgcttcttcaacc 20697
>emb|AL772227.5| Mouse DNA sequence from clone RP23-1O16 on chromosome 11 Contains two novel genes, the 5' end of the gene for a novel protein similar to human Class V ATPase type 10B (ATP10B) (9030605H24Rik) and the 3' end of a novel gene, complete sequence Length = 178001 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 349 atcatcatctccaactccttctgcttct 376 |||| |||||||||||||| |||||||| Sbjct: 133426 atcagcatctccaactcctcctgcttct 133399
>emb|AL646042.14| Mouse DNA sequence from clone RP23-70A15 on chromosome 11 Contains the 5' end of the Ulk2 gene for Unc-51 like kinase 2 (C. elegans), two novel genes (A530017D24Rik, D630015H07), the Akap10 gene for A kinase (PRKA) anchor protein 10, the 5' end of the gene for a novel protein similar to human sperm antigen HCMOGT-1 (B230396K10Rik) and three CpG islands, complete sequence Length = 159693 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 tccaactccttctgcttcttcaac 381 ||||||||||||| |||||||||| Sbjct: 134447 tccaactccttctccttcttcaac 134424
>gb|AY119016.1| Drosophila melanogaster LP04564 full insert cDNA Length = 2477 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 cagtgtaatctacaaaattt 274 |||||||||||||||||||| Sbjct: 2052 cagtgtaatctacaaaattt 2071
>gb|AC046134.8| Homo sapiens 3 BAC RP11-553K23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168949 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 cggaacagacagatcatctg 132 |||||||||||||||||||| Sbjct: 87006 cggaacagacagatcatctg 86987
>ref|NM_164511.1| Drosophila melanogaster CG31694-RA (CG31694), mRNA Length = 2668 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 cagtgtaatctacaaaattt 274 |||||||||||||||||||| Sbjct: 2291 cagtgtaatctacaaaattt 2310
>gb|AC009392.6| Drosophila melanogaster, chromosome 2L, region 23A-23E, BAC clone BACR42J13, complete sequence Length = 179125 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 cagtgtaatctacaaaattt 274 |||||||||||||||||||| Sbjct: 144845 cagtgtaatctacaaaattt 144826
>gb|DQ073639.1| Nicotiana tabacum bZIP mRNA, complete cds Length = 1529 Score = 40.1 bits (20), Expect = 8.1 Identities = 50/60 (83%) Strand = Plus / Minus Query: 429 agtgtaagcctgcttcctcgctctggaccttgcagctgattccctgttttttatcattct 488 ||||||||||||||||| || || || ||||| || ||||| ||||| || |||||||| Sbjct: 1134 agtgtaagcctgcttccgagcccttgatcttgctgcggattctctgttcttaatcattct 1075
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 catctccaactccttctgct 373 |||||||||||||||||||| Sbjct: 5529940 catctccaactccttctgct 5529921
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 cgcttgcgcccaggtgtctg 557 |||||||||||||||||||| Sbjct: 16752830 cgcttgcgcccaggtgtctg 16752811
>gb|AC074030.17|AC074030 Homo sapiens 12 BAC RP11-425I22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 163700 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 gttttttatcattctttttt 493 |||||||||||||||||||| Sbjct: 47123 gttttttatcattctttttt 47104
>gb|AC016144.13|AC016144 Homo sapiens 12 BAC RP11-367O10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178453 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 gttttttatcattctttttt 493 |||||||||||||||||||| Sbjct: 15596 gttttttatcattctttttt 15615
>emb|BX000346.3|CNS08CDC Oryza sativa chromosome 12, . BAC OSJNBb0084C05 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 117585 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 catctccaactccttctgct 373 |||||||||||||||||||| Sbjct: 68199 catctccaactccttctgct 68218
>dbj|AP005820.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0091C16 Length = 162527 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 cgcttgcgcccaggtgtctg 557 |||||||||||||||||||| Sbjct: 129885 cgcttgcgcccaggtgtctg 129866
>dbj|AP004302.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1122_H01 Length = 103030 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 cgcttgcgcccaggtgtctg 557 |||||||||||||||||||| Sbjct: 1072 cgcttgcgcccaggtgtctg 1053
>gb|AC007765.1|AC007765 Drosophila melanogaster, chromosome 2L, region 23C1-23C5, P1 clones DS02190 and DS00906, complete sequence Length = 163403 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 cagtgtaatctacaaaattt 274 |||||||||||||||||||| Sbjct: 161450 cagtgtaatctacaaaattt 161469
>gb|AE003581.4| Drosophila melanogaster chromosome 2L, section 10 of 83 of the complete sequence Length = 314957 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 cagtgtaatctacaaaattt 274 |||||||||||||||||||| Sbjct: 39248 cagtgtaatctacaaaattt 39229
>emb|BX470214.6| Zebrafish DNA sequence from clone DKEY-27M7 in linkage group 18, complete sequence Length = 234545 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 acagtctaacttatcatatacaaa 51 |||||||| ||||||||||||||| Sbjct: 94860 acagtctaccttatcatatacaaa 94837
>gb|AF001454.1|AF001454 Helianthus annuus Dc3 promoter-binding factor-2 (DPBF-2) mRNA, complete cds Length = 1062 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 460 gcagctgattccctgttttttatcattcttttttgccttctttc 503 ||||| || ||||| || |||||||||| |||||||||||||| Sbjct: 592 gcagcagactccctattctttatcattcgcttttgccttctttc 549
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 catctccaactccttctgct 373 |||||||||||||||||||| Sbjct: 5529929 catctccaactccttctgct 5529910
>gb|AC005255.1|AC005255 Homo sapiens chromosome 19, CIT-HSP-146e8, complete sequence Length = 94343 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 ttcttttttgccttctttct 504 |||||||||||||||||||| Sbjct: 57729 ttcttttttgccttctttct 57710
>gb|AF061870.1|AF061870 Helianthus annuus Dc3 promoter-binding factor-3 mRNA, partial cds Length = 913 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 460 gcagctgattccctgttttttatcattcttttttgccttctttc 503 ||||| ||||| || || ||||||||||| |||||||| ||||| Sbjct: 566 gcagccgattctctattctttatcattctcttttgcctcctttc 523
>emb|AL844535.13| Mouse DNA sequence from clone RP23-211K16 on chromosome 2, complete sequence Length = 204676 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 aacttatcatatacaaagaa 54 |||||||||||||||||||| Sbjct: 197033 aacttatcatatacaaagaa 197052
>emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B1280F04 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160556 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 catctccaactccttctgct 373 |||||||||||||||||||| Sbjct: 82745 catctccaactccttctgct 82726
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 catctccaactccttctgct 373 |||||||||||||||||||| Sbjct: 122945 catctccaactccttctgct 122964
>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome Length = 4303871 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 tccctgttttttatcattct 488 |||||||||||||||||||| Sbjct: 592281 tccctgttttttatcattct 592300
>emb|AL683824.8| Mouse DNA sequence from clone RP23-90O18 on chromosome 3, complete sequence Length = 233589 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 ttcttttttgccttctttct 504 |||||||||||||||||||| Sbjct: 143599 ttcttttttgccttctttct 143580
>gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence, complete sequence Length = 116156 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 cttctgcttcttcaacctct 385 |||||||||||||||||||| Sbjct: 8280 cttctgcttcttcaacctct 8261
>dbj|AP000945.5| Homo sapiens genomic DNA, chromosome 18p clone:RP11-870F11, complete sequences Length = 216975 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gataaaattaaaacatgtac 82 |||||||||||||||||||| Sbjct: 60686 gataaaattaaaacatgtac 60705 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,742,615 Number of Sequences: 3902068 Number of extensions: 5742615 Number of successful extensions: 119935 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 119591 Number of HSP's gapped (non-prelim): 344 length of query: 596 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 573 effective length of database: 17,143,297,704 effective search space: 9823109584392 effective search space used: 9823109584392 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
