ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags7i23 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 153 bits (77), Expect = 9e-34 Identities = 131/149 (87%) Strand = Plus / Minus Query: 483 ccactccacgaggctctcgtcgccgagggggcgggatgtgtcgacgggcttccggccggt 542 |||||||||||||||||| ||||||||||| ||||| | |||||| ||||||||||| || Sbjct: 16547469 ccactccacgaggctctcatcgccgaggggacgggacgagtcgacaggcttccggcctgt 16547410 Query: 543 gatgagctccaggagcaccaccccgaaggagaacacgtccgatttctccgtcagcttccc 602 |||||||||||| || || || |||||||||||||||||||||||||| |||||||| || Sbjct: 16547409 gatgagctccagaaggacgacgccgaaggagaacacgtccgatttctcggtcagctttcc 16547350 Query: 603 cgtcgaggcatactccggcaccaagtacc 631 || || |||||||| || ||||||||| Sbjct: 16547349 tgtggatgcatactctggagccaagtacc 16547321 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 319 acctgccccatcttgggcctcctggcggccgagtgccgaatgcacgccaccgccgcctcg 378 ||||| |||||||| ||||||| || || |||||||| ||||||||| | || |||||| Sbjct: 16550511 acctgtcccatctttggcctccgcgcagctgagtgccggatgcacgccgcagctgcctcg 16550452 Query: 379 atcatgcggaacatctc 395 |||| |||||||||||| Sbjct: 16550451 atcacgcggaacatctc 16550435 Score = 58.0 bits (29), Expect = 4e-05 Identities = 89/109 (81%) Strand = Plus / Minus Query: 493 aggctctcgtcgccgagggggcgggatgtgtcgacgggcttccggccggtgatgagctcc 552 |||||||| | |||||| || ||||| | |||||| ||||||| || |||||||||||| Sbjct: 16552365 aggctctcattgccgagaggacgggacgagtcgacaggcttccaacctgtgatgagctcc 16552306 Query: 553 aggagcaccaccccgaaggagaacacgtccgatttctccgtcagcttcc 601 | || || || ||||| ||||||| ||| |||||||| | |||||||| Sbjct: 16552305 ataagaacgacgccgaaagagaacatgtctgatttctcggccagcttcc 16552257 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Plus Query: 529 ggcttccggccggtgatgagctccaggagcaccaccccgaaggagaacacgtc 581 ||||| |||||||||||||||||||| || || || || |||||||| ||||| Sbjct: 16362161 ggcttgcggccggtgatgagctccagtaggacgacaccaaaggagaagacgtc 16362213 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 628 tacccgaatgtgcccatcacacgcatcgag 657 ||||| |||||||||||||||||| ||||| Sbjct: 16547224 tacccaaatgtgcccatcacacgcgtcgag 16547195 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 538 ccggtgatgagctccaggagcaccaccccgaag 570 |||||||||||||||| |||||||| |||||| Sbjct: 29954660 ccggtgatgagctccaatagcaccacaccgaag 29954692 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 546 gagctccaggagcaccaccccgaaggagaacacgtcc 582 ||||||||||||||||| ||||||||| | |||||| Sbjct: 25563058 gagctccaggagcaccatgccgaaggagtagacgtcc 25563094
>dbj|AP004728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0583E12 Length = 152449 Score = 153 bits (77), Expect = 9e-34 Identities = 131/149 (87%) Strand = Plus / Minus Query: 483 ccactccacgaggctctcgtcgccgagggggcgggatgtgtcgacgggcttccggccggt 542 |||||||||||||||||| ||||||||||| ||||| | |||||| ||||||||||| || Sbjct: 43449 ccactccacgaggctctcatcgccgaggggacgggacgagtcgacaggcttccggcctgt 43390 Query: 543 gatgagctccaggagcaccaccccgaaggagaacacgtccgatttctccgtcagcttccc 602 |||||||||||| || || || |||||||||||||||||||||||||| |||||||| || Sbjct: 43389 gatgagctccagaaggacgacgccgaaggagaacacgtccgatttctcggtcagctttcc 43330 Query: 603 cgtcgaggcatactccggcaccaagtacc 631 || || |||||||| || ||||||||| Sbjct: 43329 tgtggatgcatactctggagccaagtacc 43301 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 319 acctgccccatcttgggcctcctggcggccgagtgccgaatgcacgccaccgccgcctcg 378 ||||| |||||||| ||||||| || || |||||||| ||||||||| | || |||||| Sbjct: 46491 acctgtcccatctttggcctccgcgcagctgagtgccggatgcacgccgcagctgcctcg 46432 Query: 379 atcatgcggaacatctc 395 |||| |||||||||||| Sbjct: 46431 atcacgcggaacatctc 46415 Score = 58.0 bits (29), Expect = 4e-05 Identities = 89/109 (81%) Strand = Plus / Minus Query: 493 aggctctcgtcgccgagggggcgggatgtgtcgacgggcttccggccggtgatgagctcc 552 |||||||| | |||||| || ||||| | |||||| ||||||| || |||||||||||| Sbjct: 48345 aggctctcattgccgagaggacgggacgagtcgacaggcttccaacctgtgatgagctcc 48286 Query: 553 aggagcaccaccccgaaggagaacacgtccgatttctccgtcagcttcc 601 | || || || ||||| ||||||| ||| |||||||| | |||||||| Sbjct: 48285 ataagaacgacgccgaaagagaacatgtctgatttctcggccagcttcc 48237 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 628 tacccgaatgtgcccatcacacgcatcgag 657 ||||| |||||||||||||||||| ||||| Sbjct: 43204 tacccaaatgtgcccatcacacgcgtcgag 43175
>ref|NM_184772.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1506 Score = 135 bits (68), Expect = 2e-28 Identities = 116/132 (87%) Strand = Plus / Minus Query: 526 acgggcttccggccggtgatgagctccaggagcaccaccccgaaggagaacacgtccgat 585 ||||||||||| |||||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 1103 acgggcttccgcccggtgatgagctccaacagcaccaccccgaacgaaaacacgtccgat 1044 Query: 586 ttctccgtcagcttccccgtcgaggcatactccggcaccaagtacccgaatgtgcccatc 645 | |||||||||||||| | || || ||||||||| ||| ||||||||||||||||||| Sbjct: 1043 ctgtccgtcagcttcccgcttgatgcgtactccggcgccaggtacccgaatgtgcccatc 984 Query: 646 acacgcatcgag 657 || ||| ||||| Sbjct: 983 acgcgcgtcgag 972
>dbj|AK099276.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105H10, full insert sequence Length = 2393 Score = 135 bits (68), Expect = 2e-28 Identities = 116/132 (87%) Strand = Plus / Minus Query: 526 acgggcttccggccggtgatgagctccaggagcaccaccccgaaggagaacacgtccgat 585 ||||||||||| |||||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 1833 acgggcttccgcccggtgatgagctccaacagcaccaccccgaacgaaaacacgtccgat 1774 Query: 586 ttctccgtcagcttccccgtcgaggcatactccggcaccaagtacccgaatgtgcccatc 645 | |||||||||||||| | || || ||||||||| ||| ||||||||||||||||||| Sbjct: 1773 ctgtccgtcagcttcccgcttgatgcgtactccggcgccaggtacccgaatgtgcccatc 1714 Query: 646 acacgcatcgag 657 || ||| ||||| Sbjct: 1713 acgcgcgtcgag 1702
>dbj|AK070389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048I16, full insert sequence Length = 2466 Score = 135 bits (68), Expect = 2e-28 Identities = 116/132 (87%) Strand = Plus / Minus Query: 526 acgggcttccggccggtgatgagctccaggagcaccaccccgaaggagaacacgtccgat 585 ||||||||||| |||||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 1906 acgggcttccgcccggtgatgagctccaacagcaccaccccgaacgaaaacacgtccgat 1847 Query: 586 ttctccgtcagcttccccgtcgaggcatactccggcaccaagtacccgaatgtgcccatc 645 | |||||||||||||| | || || ||||||||| ||| ||||||||||||||||||| Sbjct: 1846 ctgtccgtcagcttcccgcttgatgcgtactccggcgccaggtacccgaatgtgcccatc 1787 Query: 646 acacgcatcgag 657 || ||| ||||| Sbjct: 1786 acgcgcgtcgag 1775
>ref|NM_184908.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1401 Score = 101 bits (51), Expect = 3e-18 Identities = 96/111 (86%) Strand = Plus / Minus Query: 546 gagctccaggagcaccaccccgaaggagaacacgtccgatttctccgtcagcttccccgt 605 ||||||||| |||| ||| ||| |||||||||||||||| ||||||||||||||||| | Sbjct: 894 gagctccagcagcatcacgccgtaggagaacacgtccgacttctccgtcagcttcccgct 835 Query: 606 cgaggcatactccggcaccaagtacccgaatgtgcccatcacacgcatcga 656 ||| || ||||||||| ||| ||||||||| || |||||||| ||| |||| Sbjct: 834 cgacgcgtactccggcgccaggtacccgaacgtccccatcacgcgcgtcga 784
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 101 bits (51), Expect = 3e-18 Identities = 96/111 (86%) Strand = Plus / Plus Query: 546 gagctccaggagcaccaccccgaaggagaacacgtccgatttctccgtcagcttccccgt 605 ||||||||| |||| ||| ||| |||||||||||||||| ||||||||||||||||| | Sbjct: 31879694 gagctccagcagcatcacgccgtaggagaacacgtccgacttctccgtcagcttcccgct 31879753 Query: 606 cgaggcatactccggcaccaagtacccgaatgtgcccatcacacgcatcga 656 ||| || ||||||||| ||| ||||||||| || |||||||| ||| |||| Sbjct: 31879754 cgacgcgtactccggcgccaggtacccgaacgtccccatcacgcgcgtcga 31879804 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Minus Query: 526 acgggcttccggccggtgatgagctccaggagcaccaccccgaaggagaacacgtccgat 585 ||||||||||| |||||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 20379151 acgggcttccgcccggtgatgagctccaacagcaccaccccgaacgaaaacacgtccgat 20379092 Query: 586 ttctccgtcagcttccccgtcgaggcatactccggcaccaagtacc 631 | |||||||||||||| | || || ||||||||| ||| ||||| Sbjct: 20379091 ctgtccgtcagcttcccgcttgatgcgtactccggcgccaggtacc 20379046 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 534 ccggccggtgatgagctccaggagcaccaccccgaaggagaacacgtccgatttctccgt 593 |||||||||||| ||||| || |||| || ||||||||||| ||||||||||| ||||| Sbjct: 6636098 ccggccggtgatcagctcgagcagcatgacgccgaaggagaagacgtccgatttgtccgt 6636039 Query: 594 cagctt 599 |||||| Sbjct: 6636038 cagctt 6636033 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 628 tacccgaatgtgcccatcacacgcatcgag 657 |||||||||||||||||||| ||| ||||| Sbjct: 20378886 tacccgaatgtgcccatcacgcgcgtcgag 20378857 Score = 44.1 bits (22), Expect = 0.59 Identities = 37/42 (88%) Strand = Plus / Plus Query: 529 ggcttccggccggtgatgagctccaggagcaccaccccgaag 570 |||||||| || | |||||||||||| ||||| ||||||||| Sbjct: 6773508 ggcttccgcccagcgatgagctccagtagcactaccccgaag 6773549
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 101 bits (51), Expect = 3e-18 Identities = 96/111 (86%) Strand = Plus / Plus Query: 546 gagctccaggagcaccaccccgaaggagaacacgtccgatttctccgtcagcttccccgt 605 ||||||||| |||| ||| ||| |||||||||||||||| ||||||||||||||||| | Sbjct: 31970210 gagctccagcagcatcacgccgtaggagaacacgtccgacttctccgtcagcttcccgct 31970269 Query: 606 cgaggcatactccggcaccaagtacccgaatgtgcccatcacacgcatcga 656 ||| || ||||||||| ||| ||||||||| || |||||||| ||| |||| Sbjct: 31970270 cgacgcgtactccggcgccaggtacccgaacgtccccatcacgcgcgtcga 31970320 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Minus Query: 526 acgggcttccggccggtgatgagctccaggagcaccaccccgaaggagaacacgtccgat 585 ||||||||||| |||||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 20372180 acgggcttccgcccggtgatgagctccaacagcaccaccccgaacgaaaacacgtccgat 20372121 Query: 586 ttctccgtcagcttccccgtcgaggcatactccggcaccaagtacc 631 | |||||||||||||| | || || ||||||||| ||| ||||| Sbjct: 20372120 ctgtccgtcagcttcccgcttgatgcgtactccggcgccaggtacc 20372075 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 534 ccggccggtgatgagctccaggagcaccaccccgaaggagaacacgtccgatttctccgt 593 |||||||||||| ||||| || |||| || ||||||||||| ||||||||||| ||||| Sbjct: 6635311 ccggccggtgatcagctcgagcagcatgacgccgaaggagaagacgtccgatttgtccgt 6635252 Query: 594 cagctt 599 |||||| Sbjct: 6635251 cagctt 6635246 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 628 tacccgaatgtgcccatcacacgcatcgag 657 |||||||||||||||||||| ||| ||||| Sbjct: 20371915 tacccgaatgtgcccatcacgcgcgtcgag 20371886 Score = 44.1 bits (22), Expect = 0.59 Identities = 37/42 (88%) Strand = Plus / Plus Query: 529 ggcttccggccggtgatgagctccaggagcaccaccccgaag 570 |||||||| || | |||||||||||| ||||| ||||||||| Sbjct: 6772721 ggcttccgcccagcgatgagctccagtagcactaccccgaag 6772762
>gb|AC091494.9| Oryza sativa chromosome 3 BAC OSJNBa0070N04 genomic sequence, complete sequence Length = 150663 Score = 101 bits (51), Expect = 3e-18 Identities = 96/111 (86%) Strand = Plus / Plus Query: 546 gagctccaggagcaccaccccgaaggagaacacgtccgatttctccgtcagcttccccgt 605 ||||||||| |||| ||| ||| |||||||||||||||| ||||||||||||||||| | Sbjct: 80947 gagctccagcagcatcacgccgtaggagaacacgtccgacttctccgtcagcttcccgct 81006 Query: 606 cgaggcatactccggcaccaagtacccgaatgtgcccatcacacgcatcga 656 ||| || ||||||||| ||| ||||||||| || |||||||| ||| |||| Sbjct: 81007 cgacgcgtactccggcgccaggtacccgaacgtccccatcacgcgcgtcga 81057
>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete sequence Length = 152883 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Minus Query: 526 acgggcttccggccggtgatgagctccaggagcaccaccccgaaggagaacacgtccgat 585 ||||||||||| |||||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 23451 acgggcttccgcccggtgatgagctccaacagcaccaccccgaacgaaaacacgtccgat 23392 Query: 586 ttctccgtcagcttccccgtcgaggcatactccggcaccaagtacc 631 | |||||||||||||| | || || ||||||||| ||| ||||| Sbjct: 23391 ctgtccgtcagcttcccgcttgatgcgtactccggcgccaggtacc 23346 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 628 tacccgaatgtgcccatcacacgcatcgag 657 |||||||||||||||||||| ||| ||||| Sbjct: 23186 tacccgaatgtgcccatcacgcgcgtcgag 23157
>ref|XM_476579.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1554 Score = 81.8 bits (41), Expect = 3e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 535 cggccggtgatgagctccaggagcaccaccccgaaggagaacacgtccgatttctccgtc 594 |||||||||| |||||||| |||| || ||| ||||||||||||| || || |||||| Sbjct: 1052 cggccggtgagaagctccagcagcatgacgccgtaggagaacacgtcggacttgtccgtc 993 Query: 595 agcttccccgtcgaggcatactccggcaccaagtacccgaatgtgcccatcac 647 |||||||| |||| || ||||||||| ||| ||||||||| || |||||||| Sbjct: 992 agcttcccgctcgacgcgtactccggcgccaggtacccgaacgtccccatcac 940
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 81.8 bits (41), Expect = 3e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 535 cggccggtgatgagctccaggagcaccaccccgaaggagaacacgtccgatttctccgtc 594 |||||||||| |||||||| |||| || ||| ||||||||||||| || || |||||| Sbjct: 2025280 cggccggtgagaagctccagcagcatgacgccgtaggagaacacgtcggacttgtccgtc 2025339 Query: 595 agcttccccgtcgaggcatactccggcaccaagtacccgaatgtgcccatcac 647 |||||||| |||| || ||||||||| ||| ||||||||| || |||||||| Sbjct: 2025340 agcttcccgctcgacgcgtactccggcgccaggtacccgaacgtccccatcac 2025392
>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0495H05 Length = 205595 Score = 81.8 bits (41), Expect = 3e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 535 cggccggtgatgagctccaggagcaccaccccgaaggagaacacgtccgatttctccgtc 594 |||||||||| |||||||| |||| || ||| ||||||||||||| || || |||||| Sbjct: 109577 cggccggtgagaagctccagcagcatgacgccgtaggagaacacgtcggacttgtccgtc 109636 Query: 595 agcttccccgtcgaggcatactccggcaccaagtacccgaatgtgcccatcac 647 |||||||| |||| || ||||||||| ||| ||||||||| || |||||||| Sbjct: 109637 agcttcccgctcgacgcgtactccggcgccaggtacccgaacgtccccatcac 109689
>ref|NM_187616.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 5286 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 534 ccggccggtgatgagctccaggagcaccaccccgaaggagaacacgtccgatttctccgt 593 |||||||||||| ||||| || |||| || ||||||||||| ||||||||||| ||||| Sbjct: 4839 ccggccggtgatcagctcgagcagcatgacgccgaaggagaagacgtccgatttgtccgt 4780 Query: 594 cagctt 599 |||||| Sbjct: 4779 cagctt 4774
>gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1626B05, complete sequence Length = 127946 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 534 ccggccggtgatgagctccaggagcaccaccccgaaggagaacacgtccgatttctccgt 593 |||||||||||| ||||| || |||| || ||||||||||| ||||||||||| ||||| Sbjct: 21646 ccggccggtgatcagctcgagcagcatgacgccgaaggagaagacgtccgatttgtccgt 21587 Query: 594 cagctt 599 |||||| Sbjct: 21586 cagctt 21581
>ref|NM_194513.1| Oryza sativa (japonica cultivar-group) putative protein kinase (OSJNBa0071K19.13), mRNA Length = 1707 Score = 65.9 bits (33), Expect = 2e-07 Identities = 102/125 (81%) Strand = Plus / Minus Query: 520 gtgtcgacgggcttccggccggtgatgagctccaggagcaccaccccgaaggagaacacg 579 |||||||||||| ||| ||||||| ||||||||| |||| || ||||||||||| ||| Sbjct: 1313 gtgtcgacgggccgccgcccggtgaggagctccagcagcatgacgccgaaggagaagacg 1254 Query: 580 tccgatttctccgtcagcttccccgtcgaggcatactccggcaccaagtacccgaatgtg 639 || || ||||| || ||||| || || ||||| ||||| || ||| ||| ||||| ||| Sbjct: 1253 tcggacttctcggtgagcttgccggtggaggcgtactcgggggccaggtagccgaaggtg 1194 Query: 640 cccat 644 ||||| Sbjct: 1193 cccat 1189
>gb|AC069324.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0071K19, complete sequence Length = 174752 Score = 65.9 bits (33), Expect = 2e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 520 gtgtcgacgggcttccggccggtgatgagctccaggagcaccaccccgaaggagaacacg 579 |||||||||||| ||| ||||||| ||||||||| |||| || ||||||||||| ||| Sbjct: 117189 gtgtcgacgggccgccgcccggtgaggagctccagcagcatgacgccgaaggagaagacg 117248 Query: 580 tccgatttctccgtcagcttccccgtcgaggcatactccggcaccaagtacccgaatgtg 639 || || ||||| || ||||| || || ||||| ||||| || ||| ||| ||||| ||| Sbjct: 117249 tcggacttctcggtgagcttgccggtggaggcgtactcgggggccaggtagccgaaggtg 117308 Query: 640 cccat 644 ||||| Sbjct: 117309 cccat 117313
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 65.9 bits (33), Expect = 2e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 520 gtgtcgacgggcttccggccggtgatgagctccaggagcaccaccccgaaggagaacacg 579 |||||||||||| ||| ||||||| ||||||||| |||| || ||||||||||| ||| Sbjct: 352131 gtgtcgacgggccgccgcccggtgaggagctccagcagcatgacgccgaaggagaagacg 352190 Query: 580 tccgatttctccgtcagcttccccgtcgaggcatactccggcaccaagtacccgaatgtg 639 || || ||||| || ||||| || || ||||| ||||| || ||| ||| ||||| ||| Sbjct: 352191 tcggacttctcggtgagcttgccggtggaggcgtactcgggggccaggtagccgaaggtg 352250 Query: 640 cccat 644 ||||| Sbjct: 352251 cccat 352255
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 65.9 bits (33), Expect = 2e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 520 gtgtcgacgggcttccggccggtgatgagctccaggagcaccaccccgaaggagaacacg 579 |||||||||||| ||| ||||||| ||||||||| |||| || ||||||||||| ||| Sbjct: 352131 gtgtcgacgggccgccgcccggtgaggagctccagcagcatgacgccgaaggagaagacg 352190 Query: 580 tccgatttctccgtcagcttccccgtcgaggcatactccggcaccaagtacccgaatgtg 639 || || ||||| || ||||| || || ||||| ||||| || ||| ||| ||||| ||| Sbjct: 352191 tcggacttctcggtgagcttgccggtggaggcgtactcgggggccaggtagccgaaggtg 352250 Query: 640 cccat 644 ||||| Sbjct: 352251 cccat 352255
>dbj|AK100339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081I19, full insert sequence Length = 2160 Score = 65.9 bits (33), Expect = 2e-07 Identities = 102/125 (81%) Strand = Plus / Minus Query: 520 gtgtcgacgggcttccggccggtgatgagctccaggagcaccaccccgaaggagaacacg 579 |||||||||||| ||| ||||||| ||||||||| |||| || ||||||||||| ||| Sbjct: 1534 gtgtcgacgggccgccgcccggtgaggagctccagcagcatgacgccgaaggagaagacg 1475 Query: 580 tccgatttctccgtcagcttccccgtcgaggcatactccggcaccaagtacccgaatgtg 639 || || ||||| || ||||| || || ||||| ||||| || ||| ||| ||||| ||| Sbjct: 1474 tcggacttctcggtgagcttgccggtggaggcgtactcgggggccaggtagccgaaggtg 1415 Query: 640 cccat 644 ||||| Sbjct: 1414 cccat 1410
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 65.9 bits (33), Expect = 2e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 520 gtgtcgacgggcttccggccggtgatgagctccaggagcaccaccccgaaggagaacacg 579 |||||||||||| ||| ||||||| ||||||||| |||| || ||||||||||| ||| Sbjct: 352128 gtgtcgacgggccgccgcccggtgaggagctccagcagcatgacgccgaaggagaagacg 352187 Query: 580 tccgatttctccgtcagcttccccgtcgaggcatactccggcaccaagtacccgaatgtg 639 || || ||||| || ||||| || || ||||| ||||| || ||| ||| ||||| ||| Sbjct: 352188 tcggacttctcggtgagcttgccggtggaggcgtactcgggggccaggtagccgaaggtg 352247 Query: 640 cccat 644 ||||| Sbjct: 352248 cccat 352252
>dbj|AK071821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114J15, full insert sequence Length = 1977 Score = 58.0 bits (29), Expect = 4e-05 Identities = 102/125 (81%), Gaps = 1/125 (0%) Strand = Plus / Minus Query: 520 gtgtcgacgggcttccggccggtgatgagctccaggagcaccaccccgaaggagaacacg 579 |||||||||||| ||| ||||||| ||||||||| |||| || ||||||||||| ||| Sbjct: 1533 gtgtcgacgggccgccgcccggtgaggagctccagcagcatgacgccgaaggagaagacg 1474 Query: 580 tccgatttctccgtcagcttccccgtcgaggcatactccggcaccaagtacccgaatgtg 639 || || ||||| || ||||| || || ||||| ||||| || ||| ||| ||||| ||| Sbjct: 1473 tcggacttctcggtgagcttgccggt-gaggcgtactcgggggccaggtagccgaaggtg 1415 Query: 640 cccat 644 ||||| Sbjct: 1414 cccat 1410
>gb|AC136971.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032K12, complete sequence Length = 166936 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 533 tccggccggtgatgagctccaggagcaccaccccgaaggagaacacgtccgatttctccg 592 |||||||||||| ||||||||| ||||| || |||||| | ||||||||| ||||||| Sbjct: 59585 tccggccggtgacgagctccagcagcacgacgccgaagctgtacacgtccgtcttctccg 59644 Query: 593 tcagcttc 600 ||| |||| Sbjct: 59645 tcaccttc 59652
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 533 tccggccggtgatgagctccaggagcaccaccccgaaggagaacacgtccgatttctccg 592 |||||||||||| ||||||||| ||||| || |||||| | ||||||||| ||||||| Sbjct: 6934327 tccggccggtgacgagctccagcagcacgacgccgaagctgtacacgtccgtcttctccg 6934386 Query: 593 tcagcttc 600 ||| |||| Sbjct: 6934387 tcaccttc 6934394 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 544 atgagctccaggagcaccaccccgaag 570 ||||||||||||||||||||||||||| Sbjct: 6305445 atgagctccaggagcaccaccccgaag 6305471 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 535 cggccggtgatgagctccaggagcaccaccccgaaggagaacacgtccg 583 |||||||||| ||||||||| ||||| || ||| ||| ||||||||||| Sbjct: 24689828 cggccggtgaggagctccagcagcacgacgccgtaggcgaacacgtccg 24689780 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 537 gccggtgatgagctccaggagcaccaccccgaaggagaacacgtc 581 |||||||| ||||||||||||||| || |||| |||| ||||||| Sbjct: 19888545 gccggtgacgagctccaggagcacgacgccgagggagtacacgtc 19888501 Score = 48.1 bits (24), Expect = 0.038 Identities = 27/28 (96%) Strand = Plus / Minus Query: 540 ggtgatgagctccaggagcaccaccccg 567 ||||||||||||||||||||| |||||| Sbjct: 27598911 ggtgatgagctccaggagcacgaccccg 27598884 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 540 ggtgatgagctccaggagcaccacccc 566 ||||||||||||||||||||| ||||| Sbjct: 27745806 ggtgatgagctccaggagcacgacccc 27745780 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 540 ggtgatgagctccaggagcaccac 563 ||||||||| |||||||||||||| Sbjct: 27524262 ggtgatgagttccaggagcaccac 27524239
>dbj|AK111558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054D24, full insert sequence Length = 3492 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 533 tccggccggtgatgagctccaggagcaccaccccgaaggagaacacgtccgatttctccg 592 |||||||||||| ||||||||| ||||| || |||||| | ||||||||| ||||||| Sbjct: 2993 tccggccggtgacgagctccagcagcacgacgccgaagctgtacacgtccgtcttctccg 2934 Query: 593 tcagcttc 600 ||| |||| Sbjct: 2933 tcaccttc 2926
>dbj|AK105669.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A03, full insert sequence Length = 2627 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 533 tccggccggtgatgagctccaggagcaccaccccgaaggagaacacgtccgatttctccg 592 |||||||||||| ||||||||| ||||| || |||||| | ||||||||| ||||||| Sbjct: 2047 tccggccggtgacgagctccagcagcacgacgccgaagctgtacacgtccgtcttctccg 1988 Query: 593 tcagcttc 600 ||| |||| Sbjct: 1987 tcaccttc 1980
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 533 tccggccggtgatgagctccaggagcaccaccccgaaggagaacacgtccgatttctccg 592 |||||||||||| ||||||||| ||||| || |||||| | ||||||||| ||||||| Sbjct: 7000794 tccggccggtgacgagctccagcagcacgacgccgaagctgtacacgtccgtcttctccg 7000853 Query: 593 tcagcttc 600 ||| |||| Sbjct: 7000854 tcaccttc 7000861 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 544 atgagctccaggagcaccaccccgaag 570 ||||||||||||||||||||||||||| Sbjct: 6371912 atgagctccaggagcaccaccccgaag 6371938 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Minus Query: 535 cggccggtgatgagctccaggagcaccaccccgaaggagaacacgtccg 583 |||||||||| ||||||||| ||||| || ||| ||| ||||||||||| Sbjct: 25001498 cggccggtgaggagctccagcagcacgacgccgtaggcgaacacgtccg 25001450 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 537 gccggtgatgagctccaggagcaccaccccgaaggagaacacgtc 581 |||||||| ||||||||||||||| || |||| |||| ||||||| Sbjct: 20173524 gccggtgacgagctccaggagcacgacgccgagggagtacacgtc 20173480 Score = 48.1 bits (24), Expect = 0.038 Identities = 27/28 (96%) Strand = Plus / Minus Query: 540 ggtgatgagctccaggagcaccaccccg 567 ||||||||||||||||||||| |||||| Sbjct: 27622899 ggtgatgagctccaggagcacgaccccg 27622872 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 540 ggtgatgagctccaggagcaccacccc 566 ||||||||||||||||||||| ||||| Sbjct: 27769794 ggtgatgagctccaggagcacgacccc 27769768 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 540 ggtgatgagctccaggagcaccac 563 ||||||||| |||||||||||||| Sbjct: 27548250 ggtgatgagttccaggagcaccac 27548227
>gb|AC123524.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C03, complete sequence Length = 157178 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 544 atgagctccaggagcaccaccccgaag 570 ||||||||||||||||||||||||||| Sbjct: 88723 atgagctccaggagcaccaccccgaag 88749
>gb|AY107551.1| Zea mays PCO090593 mRNA sequence Length = 798 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 524 cgacgggcttccggccggtgatgagctccaggagcaccaccccgaag 570 |||||||||| || |||| |||||||||||| |||||||| |||||| Sbjct: 172 cgacgggcttgcgcccggcgatgagctccagcagcaccacgccgaag 126
>gb|AC118284.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1087_C03, complete sequence Length = 101218 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 537 gccggtgatgagctccaggagcaccaccccgaag 570 ||||||||| ||||| |||||||||||||||||| Sbjct: 93848 gccggtgatcagctcgaggagcaccaccccgaag 93881
>ref|XM_475711.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 945 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 610 gcatactccggcaccaagtacccgaatgtgcccatcac 647 |||||||||||| ||||||| ||||| ||||||||||| Sbjct: 218 gcatactccggcgccaagtagccgaaggtgcccatcac 181
>gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0075A10, complete sequence Length = 171101 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 537 gccggtgatgagctccaggagcaccaccccgaag 570 ||||||||| ||||| |||||||||||||||||| Sbjct: 56496 gccggtgatcagctcgaggagcaccaccccgaag 56529
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 537 gccggtgatgagctccaggagcaccaccccgaag 570 ||||||||| ||||| |||||||||||||||||| Sbjct: 25822554 gccggtgatcagctcgaggagcaccaccccgaag 25822587 Score = 42.1 bits (21), Expect = 2.3 Identities = 72/89 (80%) Strand = Plus / Minus Query: 520 gtgtcgacgggcttccggccggtgatgagctccaggagcaccaccccgaaggagaacacg 579 |||||||||||| ||| || |||| ||||| |||||||| || ||| || | ||||| Sbjct: 19258204 gtgtcgacgggcacccgcccagtgagcagctcgaggagcacgacgccgtagctgtacacg 19258145 Query: 580 tccgatttctccgtcagcttccccgtcga 608 ||||| || |||||||||||||||||| Sbjct: 19258144 tccgactttgtcgtcagcttccccgtcga 19258116 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 543 gatgagctccaggagcaccaccccgaag 570 ||||||||||| ||||||||| |||||| Sbjct: 27146607 gatgagctccacgagcaccacgccgaag 27146580 Score = 40.1 bits (20), Expect = 9.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 538 ccggtgatgagctccaggagcaccaccccgaaggagaacacgtc 581 |||||||| |||||||| || || || ||||||||||| ||||| Sbjct: 25416282 ccggtgatcagctccagaagaacgacaccgaaggagaagacgtc 25416239
>dbj|AK110196.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-B01, full insert sequence Length = 3070 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 610 gcatactccggcaccaagtacccgaatgtgcccatcac 647 |||||||||||| ||||||| ||||| ||||||||||| Sbjct: 1882 gcatactccggcgccaagtagccgaaggtgcccatcac 1845
>dbj|AK100082.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002E24, full insert sequence Length = 3293 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 537 gccggtgatgagctccaggagcaccaccccgaag 570 ||||||||| ||||| |||||||||||||||||| Sbjct: 2745 gccggtgatcagctcgaggagcaccaccccgaag 2712
>gb|AC137753.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084M23, complete sequence Length = 134180 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 537 gccggtgatgagctccaggagcaccaccccgaaggagaacacgtc 581 |||||||| ||||||||||||||| || |||| |||| ||||||| Sbjct: 128849 gccggtgacgagctccaggagcacgacgccgagggagtacacgtc 128805
>gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038B22, complete sequence Length = 177557 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 537 gccggtgatgagctccaggagcaccaccccgaaggagaacacgtc 581 |||||||| ||||||||||||||| || |||| |||| ||||||| Sbjct: 65612 gccggtgacgagctccaggagcacgacgccgagggagtacacgtc 65568
>gb|AC122143.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0090F16, complete sequence Length = 147341 Score = 50.1 bits (25), Expect = 0.010 Identities = 43/49 (87%) Strand = Plus / Plus Query: 535 cggccggtgatgagctccaggagcaccaccccgaaggagaacacgtccg 583 |||||||||| ||||||||| ||||| || ||| ||| ||||||||||| Sbjct: 132660 cggccggtgaggagctccagcagcacgacgccgtaggcgaacacgtccg 132708
>dbj|AP004012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1568_D07 Length = 83857 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Plus Query: 529 ggcttccggccggtgatgagctccaggagcaccaccccgaaggagaacacgtc 581 ||||| |||||||||||||||||||| || || || || |||||||| ||||| Sbjct: 57262 ggcttgcggccggtgatgagctccagtaggacgacaccaaaggagaagacgtc 57314
>dbj|AP003518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0008F02 Length = 139655 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Plus Query: 529 ggcttccggccggtgatgagctccaggagcaccaccccgaaggagaacacgtc 581 ||||| |||||||||||||||||||| || || || || |||||||| ||||| Sbjct: 38724 ggcttgcggccggtgatgagctccagtaggacgacaccaaaggagaagacgtc 38776
>dbj|AK100169.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023P10, full insert sequence Length = 2671 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 529 ggcttccggccggtgatgagctccaggagcaccaccccgaaggagaacacgtc 581 ||||| |||||||||||||||||||| || || || || |||||||| ||||| Sbjct: 1979 ggcttgcggccggtgatgagctccagtaggacgacaccaaaggagaagacgtc 1927
>ref|XM_463825.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1914 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 541 gtgatgagctccaggagcaccaccccgaaggagaacacgtccga 584 |||||||||||||||| ||||| |||||| |||||||||||| Sbjct: 1444 gtgatgagctccaggatgaccacgccgaagctgaacacgtccga 1401
>ref|XM_463826.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2277 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 541 gtgatgagctccaggagcaccaccccgaaggagaacacgtccga 584 |||||||||||||||| ||||| |||||| |||||||||||| Sbjct: 1717 gtgatgagctccaggatgaccacgccgaagctgaacacgtccga 1674
>ref|XM_463824.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1941 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 541 gtgatgagctccaggagcaccaccccgaaggagaacacgtccga 584 |||||||||||||||| ||||| |||||| |||||||||||| Sbjct: 1381 gtgatgagctccaggatgaccacgccgaagctgaacacgtccga 1338
>ref|NM_191238.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1833 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 538 ccggtgatgagctccaggagcaccaccccgaaggagaacacgtc 581 |||||||| ||||||||||||| ||| ||||| ||||| ||||| Sbjct: 1475 ccggtgatcagctccaggagcatcacgccgaatgagaagacgtc 1432
>gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004O15 map near R3342S, complete sequence Length = 140142 Score = 48.1 bits (24), Expect = 0.038 Identities = 27/28 (96%) Strand = Plus / Plus Query: 540 ggtgatgagctccaggagcaccaccccg 567 ||||||||||||||||||||| |||||| Sbjct: 123062 ggtgatgagctccaggagcacgaccccg 123089
>gb|AC148822.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0036K13 map near R3342S, complete sequence Length = 135684 Score = 48.1 bits (24), Expect = 0.038 Identities = 27/28 (96%) Strand = Plus / Minus Query: 540 ggtgatgagctccaggagcaccaccccg 567 ||||||||||||||||||||| |||||| Sbjct: 135038 ggtgatgagctccaggagcacgaccccg 135011 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 540 ggtgatgagctccaggagcaccac 563 ||||||||| |||||||||||||| Sbjct: 60389 ggtgatgagttccaggagcaccac 60366
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Plus Query: 541 gtgatgagctccaggagcaccaccccgaaggagaacacgtccga 584 |||||||||||||||| ||||| |||||| |||||||||||| Sbjct: 566649 gtgatgagctccaggatgaccacgccgaagctgaacacgtccga 566692 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 547 agctccaggagcaccaccccgaag 570 |||||||| ||||||||||||||| Sbjct: 32934728 agctccagcagcaccaccccgaag 32934751
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Plus Query: 538 ccggtgatgagctccaggagcaccaccccgaaggagaacacgtc 581 |||||||| ||||||||||||| ||| ||||| ||||| ||||| Sbjct: 31468323 ccggtgatcagctccaggagcatcacgccgaatgagaagacgtc 31468366 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 547 agctccaggagcaccacccc 566 |||||||||||||||||||| Sbjct: 31002289 agctccaggagcaccacccc 31002270
>dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046E05 Length = 162776 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Plus Query: 538 ccggtgatgagctccaggagcaccaccccgaaggagaacacgtc 581 |||||||| ||||||||||||| ||| ||||| ||||| ||||| Sbjct: 62387 ccggtgatcagctccaggagcatcacgccgaatgagaagacgtc 62430
>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0501G04 Length = 156603 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Plus Query: 541 gtgatgagctccaggagcaccaccccgaaggagaacacgtccga 584 |||||||||||||||| ||||| |||||| |||||||||||| Sbjct: 44702 gtgatgagctccaggatgaccacgccgaagctgaacacgtccga 44745
>dbj|AK099755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093A22, full insert sequence Length = 2277 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 541 gtgatgagctccaggagcaccaccccgaaggagaacacgtccga 584 |||||||||||||||| ||||| |||||| |||||||||||| Sbjct: 1717 gtgatgagctccaggatgaccacgccgaagctgaacacgtccga 1674
>dbj|AK102832.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109I17, full insert sequence Length = 2371 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 538 ccggtgatgagctccaggagcaccaccccgaaggagaacacgtc 581 |||||||| ||||||||||||| ||| ||||| ||||| ||||| Sbjct: 1518 ccggtgatcagctccaggagcatcacgccgaatgagaagacgtc 1475
>dbj|AK069727.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027K11, full insert sequence Length = 1940 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 541 gtgatgagctccaggagcaccaccccgaaggagaacacgtccga 584 |||||||||||||||| ||||| |||||| |||||||||||| Sbjct: 1381 gtgatgagctccaggatgaccacgccgaagctgaacacgtccga 1338
>dbj|AK064397.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-G09, full insert sequence Length = 2364 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 538 ccggtgatgagctccaggagcaccaccccgaaggagaacacgtc 581 |||||||| ||||||||||||| ||| ||||| ||||| ||||| Sbjct: 1502 ccggtgatcagctccaggagcatcacgccgaatgagaagacgtc 1459
>dbj|AK061840.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-E02, full insert sequence Length = 1914 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 541 gtgatgagctccaggagcaccaccccgaaggagaacacgtccga 584 |||||||||||||||| ||||| |||||| |||||||||||| Sbjct: 1444 gtgatgagctccaggatgaccacgccgaagctgaacacgtccga 1401
>gb|AC159266.3| Mus musculus BAC clone RP24-64D24 from chromosome 8, complete sequence Length = 212727 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 321 ctgccccatcttgggcctcctgg 343 ||||||||||||||||||||||| Sbjct: 5263 ctgccccatcttgggcctcctgg 5241
>gb|AC116367.10| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0059H21 map R3342S, complete sequence Length = 133790 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 540 ggtgatgagctccaggagcaccacccc 566 ||||||||||||||||||||| ||||| Sbjct: 99866 ggtgatgagctccaggagcacgacccc 99892
>gb|AC156028.2| Mus musculus BAC clone RP23-61A11 from chromosome 8, complete sequence Length = 212724 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 321 ctgccccatcttgggcctcctgg 343 ||||||||||||||||||||||| Sbjct: 179665 ctgccccatcttgggcctcctgg 179643
>gb|AC011697.9| Drosophila melanogaster clone BACR12J05, complete sequence Length = 203498 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 427 tccaccagctcctcgaactcct 448 |||||||||||||||||||||| Sbjct: 32650 tccaccagctcctcgaactcct 32671
>ref|XM_470602.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3006 Score = 44.1 bits (22), Expect = 0.59 Identities = 37/42 (88%) Strand = Plus / Minus Query: 529 ggcttccggccggtgatgagctccaggagcaccaccccgaag 570 |||||||| || | |||||||||||| ||||| ||||||||| Sbjct: 2654 ggcttccgcccagcgatgagctccagtagcactaccccgaag 2613
>gb|AY427137.1| Vitis amurensis isolate stkVa008 resistance protein candidate gene, partial cds Length = 556 Score = 44.1 bits (22), Expect = 0.59 Identities = 31/34 (91%) Strand = Plus / Minus Query: 562 accccgaaggagaacacgtccgatttctccgtca 595 |||||||||||| ||||||| || |||||||||| Sbjct: 555 accccgaaggagtacacgtcagacttctccgtca 522
>emb|AJ303345.1|LES303345 Lycopersicon esculentum lateral suppressor gene, ORF1 and ORF2 Length = 57047 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 78 tatataataactaaaaatacat 99 |||||||||||||||||||||| Sbjct: 37144 tatataataactaaaaatacat 37165
>gb|AC099732.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1203D03, complete sequence Length = 82352 Score = 44.1 bits (22), Expect = 0.59 Identities = 37/42 (88%) Strand = Plus / Minus Query: 529 ggcttccggccggtgatgagctccaggagcaccaccccgaag 570 |||||||| || | |||||||||||| ||||| ||||||||| Sbjct: 51237 ggcttccgcccagcgatgagctccagtagcactaccccgaag 51196
>dbj|AB232924.1| Oryzias latipes hox gene cluster, complete cds, contains hoxDb Length = 220448 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 68 aaaaacaacgtatataataact 89 |||||||||||||||||||||| Sbjct: 138472 aaaaacaacgtatataataact 138493
>gb|AC021639.5| Drosophila melanogaster, chromosome X, region 12E-12E, BAC clone BACR02C24, complete sequence Length = 234783 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 427 tccaccagctcctcgaactcct 448 |||||||||||||||||||||| Sbjct: 47731 tccaccagctcctcgaactcct 47710
>gb|AC009398.6|AC009398 Genomic sequence for Arabidopsis thaliana BAC F20B24 from chromosome I, complete sequence Length = 99416 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 626 agtacccgaatgtgcccatcacacgc 651 ||||||||||||||||||| |||||| Sbjct: 10032 agtacccgaatgtgcccatgacacgc 10057
>dbj|AK121286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108P09, full insert sequence Length = 3313 Score = 44.1 bits (22), Expect = 0.59 Identities = 37/42 (88%) Strand = Plus / Minus Query: 529 ggcttccggccggtgatgagctccaggagcaccaccccgaag 570 |||||||| || | |||||||||||| ||||| ||||||||| Sbjct: 2706 ggcttccgcccagcgatgagctccagtagcactaccccgaag 2665
>dbj|AK106842.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-H07, full insert sequence Length = 2004 Score = 44.1 bits (22), Expect = 0.59 Identities = 79/98 (80%) Strand = Plus / Minus Query: 520 gtgtcgacgggcttccggccggtgatgagctccaggagcaccaccccgaaggagaacacg 579 |||||||||||| ||| || |||| ||||| |||||||| || ||| || | ||||| Sbjct: 1220 gtgtcgacgggcacccgcccagtgagcagctcgaggagcacgacgccgtagctgtacacg 1161 Query: 580 tccgatttctccgtcagcttccccgtcgaggcatactc 617 ||||| || |||||||||||||||||| || ||||| Sbjct: 1160 tccgactttgtcgtcagcttccccgtcgacgcgtactc 1123
>gb|AY105112.1| Zea mays PCO103575 mRNA sequence Length = 1152 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 541 gtgatgagctccaggagcaccaccccgaag 570 |||||||||||||| |||||||| |||||| Sbjct: 556 gtgatgagctccagaagcaccacgccgaag 527
>gb|AE003494.4| Drosophila melanogaster chromosome X, section 46 of 74 of the complete sequence Length = 310498 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 427 tccaccagctcctcgaactcct 448 |||||||||||||||||||||| Sbjct: 285973 tccaccagctcctcgaactcct 285994
>gb|AC122364.4| Mus musculus chromosome 8 clone RP23-442K12, complete sequence Length = 193183 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 cacaccaaagaaagaaagaga 148 ||||||||||||||||||||| Sbjct: 82156 cacaccaaagaaagaaagaga 82176
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 453 gtcgatcgcgcggttcagcagcggc 477 ||||| ||||||||||||||||||| Sbjct: 1628707 gtcgagcgcgcggttcagcagcggc 1628683
>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01, complete sequence Length = 146303 Score = 42.1 bits (21), Expect = 2.3 Identities = 72/89 (80%) Strand = Plus / Minus Query: 520 gtgtcgacgggcttccggccggtgatgagctccaggagcaccaccccgaaggagaacacg 579 |||||||||||| ||| || |||| ||||| |||||||| || ||| || | ||||| Sbjct: 62279 gtgtcgacgggcacccgcccagtgagcagctcgaggagcacgacgccgtagctgtacacg 62220 Query: 580 tccgatttctccgtcagcttccccgtcga 608 ||||| || |||||||||||||||||| Sbjct: 62219 tccgactttgtcgtcagcttccccgtcga 62191
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 aaaatatcatgaacaaaacaa 202 ||||||||||||||||||||| Sbjct: 2423265 aaaatatcatgaacaaaacaa 2423285
>gb|AC124293.6| Homo sapiens chromosome 8, clone RP11-86O15, complete sequence Length = 111669 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 aaaagatgaacagaaacaaaa 225 ||||||||||||||||||||| Sbjct: 13335 aaaagatgaacagaaacaaaa 13315
>emb|X89226.1|OSLRK2GEN O.sativa DNA for LRK2 gene Length = 5555 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 538 ccggtgatgagctccaggagcaccaccccgaag 570 ||||||||||||||||| | |||||| |||||| Sbjct: 5012 ccggtgatgagctccagtaacaccacaccgaag 4980
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16 Length = 346362 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 372 cgcctcgatcatgcggaacat 392 ||||||||||||||||||||| Sbjct: 249118 cgcctcgatcatgcggaacat 249098
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14 Length = 348257 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 372 cgcctcgatcatgcggaacat 392 ||||||||||||||||||||| Sbjct: 163050 cgcctcgatcatgcggaacat 163030
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12 Length = 348134 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 372 cgcctcgatcatgcggaacat 392 ||||||||||||||||||||| Sbjct: 216993 cgcctcgatcatgcggaacat 217013
>emb|BX321871.5| Zebrafish DNA sequence from clone CH211-241N15 in linkage group 8, complete sequence Length = 174723 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 201 aatcaaaagatgaacagaaacaaaa 225 ||||||||||||||||| ||||||| Sbjct: 11269 aatcaaaagatgaacaggaacaaaa 11245
>gb|AC092994.4| Homo sapiens 3 BAC RP11-656A15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159445 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 agaaaaacaacgtatataata 86 ||||||||||||||||||||| Sbjct: 107542 agaaaaacaacgtatataata 107522
>gb|AC011131.6| Homo sapiens chromosome 8, clone RP11-351E7, complete sequence Length = 178705 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 aaaagatgaacagaaacaaaa 225 ||||||||||||||||||||| Sbjct: 27036 aaaagatgaacagaaacaaaa 27056
>gb|AC078871.16| Homo sapiens 12q BAC RP11-919C7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 119238 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 tataataactaaaaatacatg 100 ||||||||||||||||||||| Sbjct: 39523 tataataactaaaaatacatg 39503
>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete sequence Length = 143507 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 538 ccggtgatgagctccaggagcaccaccccgaag 570 |||||||||||||||| |||||||| |||||| Sbjct: 35357 ccggtgatgagctccaatagcaccacaccgaag 35389
>dbj|AK144724.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730027E08 product:unclassifiable, full insert sequence Length = 1805 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 193 aacaaaacaatcaaaagatgaacagaaacaaaa 225 ||||||||||||||||||| || | |||||||| Sbjct: 1213 aacaaaacaatcaaaagattaaaaaaaacaaaa 1181
>gb|AC092799.2| Homo sapiens chromosome 1 clone RP11-5F19, complete sequence Length = 162115 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 agaaaaacaacgtatataata 86 ||||||||||||||||||||| Sbjct: 95089 agaaaaacaacgtatataata 95069
>gb|AC171007.3| Gallus gallus BAC clone CH261-166I11 from chromosome ul, complete sequence Length = 223327 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 ttacaacactctcttacttca 54 ||||||||||||||||||||| Sbjct: 161143 ttacaacactctcttacttca 161163
>gb|AC105155.9| Mus musculus chromosome 3, clone RP24-346C8, complete sequence Length = 162298 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 193 aacaaaacaatcaaaagatgaacagaaacaaaa 225 ||||||||||||||||||| || | |||||||| Sbjct: 11727 aacaaaacaatcaaaagattaaaaaaaacaaaa 11759
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 546 gagctccaggagcaccaccccgaaggagaacacgtcc 582 |||||||| |||||||| ||||| |||||||||||| Sbjct: 7425990 gagctccatcagcaccacgccgaacgagaacacgtcc 7425954
>gb|AC011003.7|AC011003 Homo sapiens chromosome 8 clone RP11-86O15, complete sequence Length = 189042 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 aaaagatgaacagaaacaaaa 225 ||||||||||||||||||||| Sbjct: 175708 aaaagatgaacagaaacaaaa 175728
>dbj|AB182389.1| Oryza sativa (japonica cultivar-group) FON1 gene for CLV1-like LRR receptor kinase, complete cds Length = 4500 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 538 ccggtgatgagctccaggagcaccaccccgaag 570 |||||||||||||||| |||||||| |||||| Sbjct: 3999 ccggtgatgagctccaatagcaccacaccgaag 3967
>dbj|AB182388.1| Oryza sativa (japonica cultivar-group) FON1 mRNA for CLV1-like LRR receptor kinase, complete cds Length = 3169 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 538 ccggtgatgagctccaggagcaccaccccgaag 570 |||||||||||||||| |||||||| |||||| Sbjct: 2713 ccggtgatgagctccaatagcaccacaccgaag 2681
>gb|AF171632.1|AF171632 Bordetella bronchiseptica phosphoglucomutase (pgm) gene, complete cds Length = 3200 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 372 cgcctcgatcatgcggaacat 392 ||||||||||||||||||||| Sbjct: 482 cgcctcgatcatgcggaacat 502
>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541C02 Length = 150660 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 538 ccggtgatgagctccaggagcaccaccccgaag 570 |||||||||||||||| |||||||| |||||| Sbjct: 30808 ccggtgatgagctccaatagcaccacaccgaag 30840
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 538 ccggtgatgagctccaggagcaccaccccgaag 570 |||||||||||||||| |||||||| |||||| Sbjct: 150173 ccggtgatgagctccaatagcaccacaccgaag 150205
>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0523F01 Length = 146419 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 546 gagctccaggagcaccaccccgaaggagaacacgtcc 582 ||||||||||||||||| ||||||||| | |||||| Sbjct: 81375 gagctccaggagcaccatgccgaaggagtagacgtcc 81411
>dbj|AK111824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050A06, full insert sequence Length = 3170 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 538 ccggtgatgagctccaggagcaccaccccgaag 570 |||||||||||||||| |||||||| |||||| Sbjct: 2713 ccggtgatgagctccaatagcaccacaccgaag 2681
>ref|XM_312318.1| Anopheles gambiae str. PEST ENSANGP00000010557 (ENSANGG00000008068), partial mRNA Length = 672 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 425 ggtccaccagctcctcgaactcctgctcg 453 ||||||||||||| || |||||||||||| Sbjct: 505 ggtccaccagctcgtctaactcctgctcg 477
>dbj|AK109644.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-G12, full insert sequence Length = 1507 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 546 gagctccaggagcaccaccccgaaggagaacacgtcc 582 ||||||||||||||||| ||||||||| | |||||| Sbjct: 913 gagctccaggagcaccatgccgaaggagtagacgtcc 949
>gb|AC006197.1|AC006197 Homo sapiens, clone hRPK.2_A_1, complete sequence Length = 154354 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 tataataactaaaaatacatg 100 ||||||||||||||||||||| Sbjct: 100381 tataataactaaaaatacatg 100361
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 432 cagctcctcgaactcctgctcgtcg 456 |||||||||||| |||||||||||| Sbjct: 1924103 cagctcctcgaattcctgctcgtcg 1924127
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 aaaatatcatgaacaaaacaa 202 ||||||||||||||||||||| Sbjct: 2432634 aaaatatcatgaacaaaacaa 2432654 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 aaaacaatcaaaagatgaacagaa 219 ||||||| |||||||||||||||| Sbjct: 4108432 aaaacaagcaaaagatgaacagaa 4108455
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 546 gagctccaggagcaccaccccgaaggagaacacgtcc 582 |||||||| |||||||| ||||| |||||||||||| Sbjct: 7425869 gagctccatcagcaccacgccgaacgagaacacgtcc 7425833
>emb|AL731756.4|CNS08C85 Oryza sativa chromosome 12, . BAC OJ1220_D01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 98782 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 546 gagctccaggagcaccaccccgaaggagaacacgtcc 582 |||||||| |||||||| ||||| |||||||||||| Sbjct: 15666 gagctccatcagcaccacgccgaacgagaacacgtcc 15630
>emb|AL731552.11| Mouse DNA sequence from clone RP23-113K24 on chromosome 2, complete sequence Length = 203304 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 cacaccaaagaaagaaagaga 148 ||||||||||||||||||||| Sbjct: 23740 cacaccaaagaaagaaagaga 23760
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 505 ccgagggggcgggatgtgtcgacgggct 532 |||||||||||| ||| ||||||||||| Sbjct: 3426248 ccgagggggcggaatgggtcgacgggct 3426275
>ref|NM_100938.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT1G10620 mRNA, complete cds Length = 2157 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 628 tacccgaatgtgcccatcacacgc 651 ||||||||||||||||| |||||| Sbjct: 1607 tacccgaatgtgcccatgacacgc 1584
>gb|AC101748.7| Mus musculus chromosome 5, clone RP24-133H21, complete sequence Length = 168366 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 agcaaatacaaattcactgt 181 |||||||||||||||||||| Sbjct: 36367 agcaaatacaaattcactgt 36348
>gb|S65113.1|S65093S17 OTC=ornithine transcarbamylase [human, Genomic, 192 nt, segment 17 of 18] Length = 192 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 acacaccaaagaaagaaaga 146 |||||||||||||||||||| Sbjct: 183 acacaccaaagaaagaaaga 164
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 cgtcgatcgcgcggttcagc 471 |||||||||||||||||||| Sbjct: 488001 cgtcgatcgcgcggttcagc 488020 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 444 ctcctgctcgtcgatcgcgcggtt 467 ||||||||||||||||| |||||| Sbjct: 388462 ctcctgctcgtcgatcgtgcggtt 388439
>ref|XM_629020.1| Dictyostelium discoideum hypothetical protein (DDB0192021), partial mRNA Length = 1509 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 actaaaaatacatgaccatg 106 |||||||||||||||||||| Sbjct: 737 actaaaaatacatgaccatg 718
>ref|XM_475858.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2739 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 543 gatgagctccaggagcaccaccccgaag 570 ||||||||||| ||||||||| |||||| Sbjct: 2382 gatgagctccacgagcaccacgccgaag 2355
>ref|NM_191155.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3192 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 547 agctccaggagcaccacccc 566 |||||||||||||||||||| Sbjct: 2795 agctccaggagcaccacccc 2776
>gb|BT018380.1| Zea mays clone EL01N0307H04.d mRNA sequence Length = 1381 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 547 agctccaggagcaccaccccgaag 570 ||||||||||||||||| |||||| Sbjct: 503 agctccaggagcaccacgccgaag 480
>gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete genome Length = 2314078 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 aaaacaacgtatataataac 88 |||||||||||||||||||| Sbjct: 100454 aaaacaacgtatataataac 100435
>gb|AC113469.9| Mus musculus chromosome 8, clone RP23-261B5, complete sequence Length = 198937 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 acacaccaaagaaagaaaga 146 |||||||||||||||||||| Sbjct: 36866 acacaccaaagaaagaaaga 36885
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 gaacaaaacaatcaaaagat 211 |||||||||||||||||||| Sbjct: 2208802 gaacaaaacaatcaaaagat 2208783
>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome Length = 1111496 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gtatataataactaaaaata 96 |||||||||||||||||||| Sbjct: 957181 gtatataataactaaaaata 957200
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 543 gatgagctccaggagcaccaccccgaag 570 ||||||||||| ||||||||| |||||| Sbjct: 21575 gatgagctccacgagcaccacgccgaag 21548
>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03, complete sequence Length = 177861 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 543 gatgagctccaggagcaccaccccgaag 570 ||||||||||| ||||||||| |||||| Sbjct: 78003 gatgagctccacgagcaccacgccgaag 77976
>gb|AC147076.3| Pan troglodytes BAC clone RP43-172O18 from 7, complete sequence Length = 175186 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 cacaccaaagaaagaaagag 147 |||||||||||||||||||| Sbjct: 152859 cacaccaaagaaagaaagag 152878
>gb|AC147065.2| Pan troglodytes BAC clone RP43-163G7 from 7, complete sequence Length = 167103 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 cacaccaaagaaagaaagag 147 |||||||||||||||||||| Sbjct: 87254 cacaccaaagaaagaaagag 87273
>ref|XM_675877.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7700.2), mRNA Length = 1887 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 cgatcgcgcggttcagcagc 474 |||||||||||||||||||| Sbjct: 503 cgatcgcgcggttcagcagc 522
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 40.1 bits (20), Expect = 9.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 538 ccggtgatgagctccaggagcaccaccccgaaggagaacacgtc 581 |||||||| |||||||| || || || ||||||||||| ||||| Sbjct: 56643 ccggtgatcagctccagaagaacgacaccgaaggagaagacgtc 56600
>gb|AC121525.7| Mus musculus chromosome 5, clone RP23-359D12, complete sequence Length = 188700 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 agcaaatacaaattcactgt 181 |||||||||||||||||||| Sbjct: 144760 agcaaatacaaattcactgt 144741
>gb|AC115124.6| Mus musculus BAC clone RP24-349M22 from chromosome 18, complete sequence Length = 137371 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tcagggaacctatgagaaaa 71 |||||||||||||||||||| Sbjct: 111874 tcagggaacctatgagaaaa 111855
>gb|AC127368.3| Mus musculus BAC clone RP23-22J14 from chromosome 18, complete sequence Length = 206102 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tcagggaacctatgagaaaa 71 |||||||||||||||||||| Sbjct: 172344 tcagggaacctatgagaaaa 172363
>gb|U80845.2| Caenorhabditis elegans cosmid C24A8, complete sequence Length = 37753 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 aacaaaacaatcaaaagatgaaca 216 |||||||||||||||| ||||||| Sbjct: 6695 aacaaaacaatcaaaatatgaaca 6672
>emb|AL606534.15| Human DNA sequence from clone RP11-261C10 on chromosome 1 Contains four novel genes, the 5' end of a novel gene and the 3' end of the gene for KARP-1-binding protein (KAB), complete sequence Length = 183541 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 325 cccatcttgggcctcctggcggcc 348 |||| ||||||||||||||||||| Sbjct: 68283 cccagcttgggcctcctggcggcc 68260
>emb|AL583827.7| Human DNA sequence from clone RP11-172F7 on chromosome 9, complete sequence Length = 174024 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 caatcaaaagatgaacagaa 219 |||||||||||||||||||| Sbjct: 65709 caatcaaaagatgaacagaa 65728
>emb|AL360269.21| Human DNA sequence from clone RP11-192I3 on chromosome 1 Contains the WNT9A gene for wingless-type MMTV integration site family, member 9A and a CpG island, complete sequence Length = 141703 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 325 cccatcttgggcctcctggcggcc 348 |||| ||||||||||||||||||| Sbjct: 120287 cccagcttgggcctcctggcggcc 120310
>emb|AL135791.12| Human DNA sequence from clone RP11-162G10 on chromosome 10 Contains the gene for a novel Kruppel-type zinc finger protein (LOC57209), a tousled-like kinase 1 (TLK1)(KIAA0137, PKU-BETA) pseudogene, a zinc finger protein pseudogene, a novel gene and a CpG island, complete sequence Length = 66975 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 aacaaaacaatcaaaagatgaaca 216 ||||||| |||||||||||||||| Sbjct: 21530 aacaaaaaaatcaaaagatgaaca 21507
>gb|AC009333.12| Homo sapiens chromosome 7 clone RP11-356G1, complete sequence Length = 180019 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 cacaccaaagaaagaaagag 147 |||||||||||||||||||| Sbjct: 147993 cacaccaaagaaagaaagag 148012
>gb|AC090133.6| Homo sapiens chromosome 8, clone RP11-813L8, complete sequence Length = 201279 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 gcaaatacaaattcactgtaaaat 186 |||||||||||| ||||||||||| Sbjct: 128799 gcaaatacaaatgcactgtaaaat 128822
>gb|AC123777.4| Homo sapiens chromosome 8, clone RP11-252C15, complete sequence Length = 175943 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 gcaaatacaaattcactgtaaaat 186 |||||||||||| ||||||||||| Sbjct: 72058 gcaaatacaaatgcactgtaaaat 72081
>emb|AJ505006.1|POL505006 Sorangium cellulosum spiG gene (partial), spiH gene, spiI gene, spiJ gene, spiK gene, spiL gene and spiZ gene Length = 48000 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 376 tcgatcatgcggaacatctcgacgtcgt 403 |||||||||||||||| |||| |||||| Sbjct: 22567 tcgatcatgcggaacagctcgtcgtcgt 22540
>emb|BX663604.9| Zebrafish DNA sequence from clone CH211-222K9 in linkage group 7, complete sequence Length = 161194 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 aaattcactgtaaaatatca 190 |||||||||||||||||||| Sbjct: 121467 aaattcactgtaaaatatca 121486
>gb|AC148603.10| Gasterosteus aculeatus clone uogacrs-15f5-1, complete sequence Length = 36332 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ataataactaaaaatacatg 100 |||||||||||||||||||| Sbjct: 30181 ataataactaaaaatacatg 30200
>gb|AC110079.3| Homo sapiens BAC clone RP11-384K6 from 4, complete sequence Length = 167099 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 325 cccatcttgggcctcctggcggcc 348 |||| ||||||||||||||||||| Sbjct: 51513 cccagcttgggcctcctggcggcc 51536
>gb|AC093206.2| Homo sapiens chromosome 5 clone CTC-448D22, complete sequence Length = 161754 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 acaaaacaatcaaaagatga 213 |||||||||||||||||||| Sbjct: 122860 acaaaacaatcaaaagatga 122879
>dbj|AB179421.1| Macaca fascicularis testis cDNA clone: QtsA-19705, similar to human RCD1 required for cell differentiation1 homolog (S.pombe) (RQCD1), mRNA, RefSeq: NM_005444.1 Length = 2529 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 gggaacctatgagaaaaaca 74 |||||||||||||||||||| Sbjct: 1096 gggaacctatgagaaaaaca 1115
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 cacgtcgttcagggtcaggctgtc 305 |||||||| ||||||||||||||| Sbjct: 1921543 cacgtcgtccagggtcaggctgtc 1921566
>gb|AY908608.1| Hookeriopsis cuspidata isolate MDP137 small ribosomal protein 4 (rps4) gene, partial cds; and tRNA-Ser gene, partial sequence; chloroplast Length = 665 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tatataataactaaaaatac 97 |||||||||||||||||||| Sbjct: 622 tatataataactaaaaatac 603
>ref|NM_076337.1| Caenorhabditis elegans Prion-like-(Q/N-rich)-domain-bearing protein family member (pqn-15) (pqn-15) mRNA, complete cds Length = 3654 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 aacaaaacaatcaaaagatgaaca 216 |||||||||||||||| ||||||| Sbjct: 2093 aacaaaacaatcaaaatatgaaca 2116
>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E07 Length = 176486 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 547 agctccaggagcaccacccc 566 |||||||||||||||||||| Sbjct: 59268 agctccaggagcaccacccc 59249
>gb|AC005627.2|AC005627 Homo sapiens PAC clone RP4-577P23 from 1, complete sequence Length = 137304 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 325 cccatcttgggcctcctggcggcc 348 |||| ||||||||||||||||||| Sbjct: 47249 cccagcttgggcctcctggcggcc 47272
>dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1534_E09 Length = 126209 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 547 agctccaggagcaccaccccgaag 570 |||||||| ||||||||||||||| Sbjct: 89469 agctccagcagcaccaccccgaag 89492
>gb|AC008444.4|AC008444 Homo sapiens chromosome 5 clone CTC-338N15, complete sequence Length = 107553 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 acaaaacaatcaaaagatga 213 |||||||||||||||||||| Sbjct: 55278 acaaaacaatcaaaagatga 55259
>dbj|AK120741.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003P18, full insert sequence Length = 3613 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 547 agctccaggagcaccacccc 566 |||||||||||||||||||| Sbjct: 2874 agctccaggagcaccacccc 2855
>emb|X57273.1|ZMPS4H3 Z.mays pollen specific mRNA C-terminal (clone 4H3) Length = 793 Score = 40.1 bits (20), Expect = 9.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 535 cggccggtgatgagctccaggagcaccaccccgaag 570 ||||||||||||||||| || ||||| || |||||| Sbjct: 633 cggccggtgatgagctcgagcagcacgacgccgaag 668
>gb|AC154800.2| Mus musculus BAC clone RP24-496O9 from 14, complete sequence Length = 175264 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 tgaacaaaacaatcaaaaga 210 |||||||||||||||||||| Sbjct: 118791 tgaacaaaacaatcaaaaga 118772
>gb|AF205588.1|AF205588 Homo sapiens ZNF01 and HUMORFKG1B genes, partial sequence, complete sequence Length = 312283 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 aacaaaacaatcaaaagatgaaca 216 ||||||| |||||||||||||||| Sbjct: 5661 aacaaaaaaatcaaaagatgaaca 5638
>dbj|AK066978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090P22, full insert sequence Length = 2958 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 547 agctccaggagcaccaccccgaag 570 |||||||| ||||||||||||||| Sbjct: 2195 agctccagcagcaccaccccgaag 2172
>emb|CR846080.8| Zebrafish DNA sequence from clone DKEY-29P9 in linkage group 3, complete sequence Length = 242078 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 aatacaaattcactgtaaaa 185 |||||||||||||||||||| Sbjct: 74256 aatacaaattcactgtaaaa 74237
>gb|AY111189.1| Zea mays CL2103_-1 mRNA sequence Length = 763 Score = 40.1 bits (20), Expect = 9.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 535 cggccggtgatgagctccaggagcaccaccccgaag 570 ||||||||||||||||| || ||||| || |||||| Sbjct: 633 cggccggtgatgagctcgagcagcacgacgccgaag 668
>gb|AY110053.1| Zea mays CL2103_2 mRNA sequence Length = 628 Score = 40.1 bits (20), Expect = 9.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 535 cggccggtgatgagctccaggagcaccaccccgaag 570 ||||||||||||||||| || ||||| || |||||| Sbjct: 552 cggccggtgatgagctcgagcagcacgacgccgaag 587
>emb|CR932040.2| Medicago truncatula chromosome 5 clone mth2-55h1, COMPLETE SEQUENCE Length = 122965 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 acaccaaagaaagaaagaga 148 |||||||||||||||||||| Sbjct: 54178 acaccaaagaaagaaagaga 54159
>gb|AC140438.3| Mus musculus BAC clone RP24-106N10 from 12, complete sequence Length = 154736 Score = 40.1 bits (20), Expect = 9.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 153 tagtaagacagcaaat-acaaattcact 179 |||||||||||||||| ||||||||||| Sbjct: 58308 tagtaagacagcaaatgacaaattcact 58281
>emb|CT009764.9| Mouse DNA sequence from clone RP23-173E21 on chromosome 12, complete sequence Length = 214925 Score = 40.1 bits (20), Expect = 9.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 153 tagtaagacagcaaat-acaaattcact 179 |||||||||||||||| ||||||||||| Sbjct: 105572 tagtaagacagcaaatgacaaattcact 105545
>dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09C23, TM0001, complete sequence Length = 103397 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 atgtagtaagacagcaaata 169 |||||||||||||||||||| Sbjct: 67729 atgtagtaagacagcaaata 67710 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,954,924 Number of Sequences: 3902068 Number of extensions: 7954924 Number of successful extensions: 189144 Number of sequences better than 10.0: 162 Number of HSP's better than 10.0 without gapping: 172 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 186846 Number of HSP's gapped (non-prelim): 2300 length of query: 671 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 648 effective length of database: 17,143,297,704 effective search space: 11108856912192 effective search space used: 11108856912192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
